MegaLTR Processing Started.
Downloading FASTA file
FASTA file downloaded and extracted
MegaLTR Nextflow Pipeline Started.
Genome preparation completed.
LTR-FINDER detection completed.
LTR-HARVEST detection completed.
LTR candidates merged.
LTR-Retriever refinement completed.
LTRdigest domain annotation completed.
TEsorter classification completed.
Results merged. Extracting sequences...
Insertion time calculation completed.
Insertion time plots generated.
Non-redundant LTR-RT library built.
Restoring original chromosome IDs completed.
MegaLTR Pipeline Finished. Sending results...
