Specifications
==============

Sequence source file: "/srv/lustre01/project/qmm_mm_pet-j9cm8n271e4/shared/webserver/new-megassr-v5/results/6ae3a5ef7b520/fasta/6ae3a5ef7b520_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              65094
Total size of examined sequences (bp):           79168277
Total number of identified SSRs:                 7190
Number of SSR containing sequences:              6463
Number of sequences containing more than 1 SSR:  622
Number of SSRs present in compound formation:    171


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	2
2	3836
3	894
4	574
5	1437
6	447

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	1
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	1
AC	-	-	-	383	174	96	55													708
AG	-	-	-	154	73	33	18													278
AT	-	-	-	93	33	13	7													146
CA	-	-	-	312	124	68	33													537
CG	-	-	-	6	2															8
CT	-	-	-	154	57	31	14													256
GA	-	-	-	121	43	18	5													187
GC	-	-	-	6	1															7
GT	-	-	-	291	161	73	52													577
TA	-	-	-	83	29	14	9													135
TC	-	-	-	147	47	23	9													226
TG	-	-	-	431	196	90	53	1												771
AAC	-	-	50	7																57
AAG	-	-	27	6																33
AAT	-	-	28	5																33
ACA	-	-	36	7																43
ACC	-	-	2																	2
ACT	-	-	3	1																4
AGA	-	-	13	2																15
AGC	-	-	17	2																19
AGG	-	-	7	1																8
AGT	-	-	4	2																6
ATA	-	-	17	4																21
ATC	-	-	14	2																16
ATG	-	-	6	3																9
ATT	-	-	28	5																33
CAA	-	-	19	1																20
CAC	-	-	9	2																11
CAG	-	-	21	3																24
CAT	-	-	12	4																16
CCA	-	-	6	1																7
CCG	-	-	1																	1
CCT	-	-	18	2																20
CTA	-	-	1																	1
CTC	-	-	16	2																18
CTG	-	-	14	4																18
CTT	-	-	37	10																47
GAA	-	-	16	3																19
GAC	-	-	1																	1
GAG	-	-	26	8																34
GAT	-	-	13	5																18
GCA	-	-	13	4																17
GCC	-	-	2																	2
GCG	-	-	1																	1
GCT	-	-	12	2																14
GGA	-	-	11	1																12
GGC	-	-	1																	1
GGT	-	-	10	2																12
GTA	-	-	1	1																2
GTC	-	-	1																	1
GTG	-	-	7	1																8
GTT	-	-	20																	20
TAA	-	-	15	1																16
TAC	-	-	4																	4
TAG	-	-	5	1																6
TAT	-	-	14	4																18
TCA	-	-	13	2																15
TCC	-	-	22	3																25
TCT	-	-	10	1																11
TGA	-	-	9	5																14
TGC	-	-	15	2																17
TGG	-	-	8																	8
TGT	-	-	21	5																26
TTA	-	-	14	5																19
TTC	-	-	22	4																26
TTG	-	-	40	5																45
AAAC	-	59																		59
AAAG	-	15																		15
AAAT	-	24																		24
AACA	-	5																		5
AACT	-	1																		1
AAGA	-	4																		4
AAGC	-	2																		2
AAGT	-	3																		3
AATA	-	24																		24
AATC	-	5																		5
AATG	-	2																		2
AATT	-	2																		2
ACAA	-	8																		8
ACAG	-	5																		5
ACGA	-	1																		1
ACGT	-	1																		1
ACTG	-	1																		1
AGAA	-	8																		8
AGAC	-	1																		1
AGCC	-	1																		1
AGCT	-	4																		4
AGTA	-	1																		1
AGTG	-	4																		4
AGTT	-	1																		1
ATAA	-	8																		8
ATCA	-	2																		2
ATCC	-	7																		7
ATCT	-	3																		3
ATGA	-	2																		2
ATGC	-	2																		2
ATGG	-	5																		5
ATGT	-	3																		3
ATTA	-	1																		1
ATTC	-	1																		1
ATTG	-	1																		1
ATTT	-	32																		32
CAAA	-	12																		12
CAAC	-	2																		2
CAAG	-	1																		1
CAAT	-	3																		3
CACG	-	1																		1
CAGA	-	2																		2
CAGC	-	2																		2
CAGT	-	1																		1
CATA	-	3																		3
CATC	-	6																		6
CATG	-	1																		1
CATT	-	2																		2
CCAT	-	4																		4
CCCA	-	1																		1
CCCT	-	1																		1
CCTA	-	1																		1
CCTC	-	2																		2
CCTG	-	2																		2
CCTT	-	2																		2
CGCA	-	2																		2
CGCT	-	1																		1
CTCA	-	1																		1
CTCC	-	2																		2
CTGA	-	1																		1
CTGT	-	1																		1
CTTA	-	1																		1
CTTC	-	5																		5
CTTT	-	7																		7
GAAA	-	7																		7
GAAT	-	2																		2
GAGG	-	1																		1
GAGT	-	2																		2
GATG	-	5																		5
GATT	-	1																		1
GCAA	-	1																		1
GCAC	-	2																		2
GCAG	-	1																		1
GCCA	-	3																		3
GCCC	-	1																		1
GCCT	-	1																		1
GCGA	-	1																		1
GCTA	-	1																		1
GGAT	-	2																		2
GGCT	-	3																		3
GGGT	-	1																		1
GGTG	-	1																		1
GTAA	-	1																		1
GTAT	-	1																		1
GTCA	-	1																		1
GTCT	-	1																		1
GTGA	-	1																		1
GTGC	-	1																		1
GTTT	-	12																		12
TAAA	-	8																		8
TAAC	-	2																		2
TAAG	-	1																		1
TAGA	-	3																		3
TAGC	-	2																		2
TATC	-	3																		3
TATG	-	1																		1
TATT	-	26																		26
TCAA	-	4																		4
TCAC	-	5																		5
TCAT	-	2																		2
TCCA	-	5																		5
TCCT	-	1																		1
TCGC	-	1																		1
TCTA	-	2																		2
TCTG	-	2																		2
TCTT	-	7																		7
TGAA	-	1																		1
TGAC	-	2																		2
TGAG	-	2																		2
TGAT	-	1																		1
TGCA	-	1																		1
TGCC	-	2																		2
TGGA	-	3																		3
TGGG	-	2																		2
TGTA	-	1																		1
TGTC	-	2																		2
TGTT	-	15																		15
TTAC	-	5																		5
TTAT	-	12																		12
TTCA	-	2																		2
TTCT	-	6																		6
TTGA	-	4																		4
TTGG	-	1																		1
TTGT	-	14																		14
TTTA	-	14																		14
TTTC	-	11																		11
TTTG	-	25																		25
AAAAC	131																			131
AAAAG	27																			27
AAAAT	29																			29
AAACA	23																			23
AAACC	1																			1
AAACT	7																			7
AAAGA	5																			5
AAAGC	2																			2
AAAGT	1																			1
AAATA	14																			14
AAATC	4																			4
AAATG	4	1																		5
AACAA	14																			14
AACAC	2																			2
AACAT	2																			2
AACCA	1																			1
AACCT	1																			1
AACTA	4																			4
AACTC	1																			1
AACTG	2																			2
AAGAA	8																			8
AAGAT	3																			3
AAGCA	1																			1
AAGCT	1																			1
AAGGA	3																			3
AAGTA	1																			1
AAGTG	2																			2
AATAA	7																			7
AATAC	1																			1
AATAG	7	1																		8
AATAT	4																			4
AATCC	3																			3
AATCG	1																			1
AATCT	2																			2
AATGA	2																			2
AATGT	2																			2
AATTA	4																			4
AATTC	7																			7
AATTG	16																			16
AATTT	4																			4
ACAAA	14																			14
ACAAG	3																			3
ACAAT	1																			1
ACACA	4																			4
ACACT	1																			1
ACAGA	1																			1
ACAGC	2																			2
ACAGT	1																			1
ACATG	1																			1
ACATT	3																			3
ACCAG	1																			1
ACCTG	1																			1
ACCTT	1																			1
ACTAC	1																			1
ACTAT	2																			2
ACTGA	1																			1
ACTGG	1																			1
ACTGT	4																			4
ACTTC	3																			3
ACTTG	2																			2
AGAAA	8																			8
AGAAC	2																			2
AGAAG	1																			1
AGAAT	1																			1
AGAGA	3																			3
AGAGC	2																			2
AGAGG	1																			1
AGATA	4																			4
AGATC	2																			2
AGATT	3																			3
AGCAG	2																			2
AGCAT	1																			1
AGCCC	1																			1
AGCGA	1																			1
AGCTA	6																			6
AGCTG	1																			1
AGGAA	3																			3
AGGAG	2																			2
AGGCT	1																			1
AGGGG	1																			1
AGTAA	1																			1
AGTAT	3																			3
AGTCA	2																			2
AGTCC	1																			1
AGTGA	1																			1
AGTGT	4																			4
AGTTA	1																			1
AGTTC	2																			2
AGTTT	3																			3
ATAAA	8																			8
ATAAC	1																			1
ATAAG	2																			2
ATAAT	2																			2
ATACA	1																			1
ATATA	2																			2
ATATC	1																			1
ATATG	1																			1
ATCAA	3																			3
ATCAT	1																			1
ATCCA	2																			2
ATCTA	11																			11
ATCTC	1																			1
ATCTG	2																			2
ATGAA	4																			4
ATGAT	2																			2
ATGGT	2																			2
ATGTA	4																			4
ATGTC	1																			1
ATGTG	2																			2
ATGTT	1																			1
ATTAA	4																			4
ATTAG	8																			8
ATTAT	1																			1
ATTCA	10		1																	11
ATTCT	5																			5
ATTGA	4																			4
ATTGT	5																			5
ATTTA	2																			2
ATTTC	3																			3
ATTTG	4																			4
ATTTT	16																			16
CAAAA	26																			26
CAAAC	1																			1
CAAAG	1																			1
CAAAT	3																			3
CAACA	1																			1
CAAGT	2																			2
CAATA	1																			1
CAATC	1																			1
CAATT	9	1																		10
CACAA	1																			1
CACAG	1																			1
CACAT	1																			1
CACCC	3																			3
CACCT	1																			1
CACGC	1																			1
CACTA	1																			1
CACTC	2																			2
CACTT	1																			1
CAGAA	2																			2
CAGAG	1																			1
CAGAT	1																			1
CAGCT	2																			2
CAGGA	2																			2
CAGGG	1																			1
CAGGT	1																			1
CAGTG	1																			1
CAGTT	1																			1
CATAG	2																			2
CATAT	1																			1
CATTT	5																			5
CCAAA	2																			2
CCATA	1																			1
CCCAC	1																			1
CCCAT	1																			1
CCCCA	1																			1
CCCCT	5																			5
CCCTT	1																			1
CCTAA	1																			1
CCTAC	1																			1
CCTCC	4																			4
CCTCT	6																			6
CCTGT	1																			1
CCTTG	1																			1
CCTTT	1																			1
CGAAC	3																			3
CGTCA	1																			1
CTAAT	1																			1
CTAGC	1																			1
CTAGG	1																			1
CTATA	2																			2
CTATC	1																			1
CTATT	4																			4
CTCAA	1																			1
CTCAC	1																			1
CTCCT	2																			2
CTCTC	4																			4
CTCTG	1																			1
CTCTT	1																			1
CTGAA	2																			2
CTGCA	1																			1
CTGCT	1																			1
CTGGC	1																			1
CTGGT	1																			1
CTGTA	3																			3
CTGTG	1																			1
CTTAT	1																			1
CTTCA	3																			3
CTTCC	1																			1
CTTCT	1																			1
CTTGA	1																			1
CTTGC	1																			1
CTTGT	7																			7
CTTTA	1																			1
CTTTC	4																			4
CTTTT	9																			9
GAAAA	9																			9
GAAAC	1																			1
GAACA	1																			1
GAACC	1																			1
GAACT	1																			1
GAAGA	3																			3
GAATA	2																			2
GAATG	1																			1
GAATT	3																			3
GACCA	1																			1
GACTG	2																			2
GACTT	1																			1
GAGAA	2																			2
GAGAT	3																			3
GAGCA	1																			1
GAGGA	1																			1
GAGGC	1																			1
GAGGG	1																			1
GAGTA	1																			1
GAGTC	1																			1
GAGTG	2																			2
GATAA	2																			2
GATAT	1																			1
GATTA	4																			4
GATTG	1																			1
GATTT	1																			1
GCACA	1																			1
GCAGG	1																			1
GCAGT	1																			1
GCATT	1																			1
GCCAA	1																			1
GCCTT	1																			1
GCTAA	9																			9
GCTAG	1																			1
GCTCA	1																			1
GCTCT	2																			2
GCTGA	1																			1
GCTGC	1																			1
GCTGT	1																			1
GCTTT	1																			1
GGAAA	1																			1
GGACA	1																			1
GGACG	1																			1
GGAGT	1																			1
GGATT	1																			1
GGCCC	1																			1
GGGAA	1																			1
GGGAG	2																			2
GGGCA	1																			1
GGGGA	1																			1
GGGGT	3																			3
GGGTG	2																			2
GGTAA	1																			1
GGTCA	1																			1
GGTTA	1																			1
GTAAA	1																			1
GTAAC	1																			1
GTAAT	1																			1
GTACT	1																			1
GTATA	1																			1
GTCAG	2																			2
GTCCG	1																			1
GTGAC	1																			1
GTGAG	2																			2
GTGCA	1																			1
GTGCT	1																			1
GTGGA	1																			1
GTGGG	1																			1
GTGGT	1																			1
GTGTA	1																			1
GTGTG	4																			4
GTGTT	1																			1
GTTAT	3																			3
GTTCA	1																			1
GTTCC	1																			1
GTTCG	1																			1
GTTCT	1																			1
GTTGG	1																			1
GTTTA	1																			1
GTTTG	2																			2
GTTTT	37																			37
TAAAA	7																			7
TAAAG	2																			2
TAACA	2																			2
TAAGA	7																			7
TAATA	2																			2
TAATC	1																			1
TAATG	2																			2
TAATT	4																			4
TACAA	1																			1
TACAC	1																			1
TACAG	1																			1
TACAT	1																			1
TACCA	1																			1
TACCT	1																			1
TACTA	1																			1
TACTG	2																			2
TAGAA	3																			3
TAGAT	3																			3
TAGCA	1																			1
TAGCT	4																			4
TAGTA	1																			1
TAGTC	1																			1
TAGTG	1																			1
TAGTT	3																			3
TATAA	2																			2
TATAC	1																			1
TATAG	2																			2
TATAT	2																			2
TATCT	11																			11
TATGT	2																			2
TATTC	7																			7
TATTG	1																			1
TATTT	6																			6
TCAAA	8																			8
TCAAG	5																			5
TCAAT	3																			3
TCACA	7																			7
TCACC	2																			2
TCACT	2																			2
TCAGT	1																			1
TCATA	1																			1
TCATC	1																			1
TCATG	2																			2
TCATT	4																			4
TCCAA	1																			1
TCCAG	1																			1
TCCAT	2																			2
TCCCT	1																			1
TCCGA		1																		1
TCCGG	1																			1
TCCTC	1																			1
TCTAG	1																			1
TCTAT	1																			1
TCTCC	4																			4
TCTCG	1																			1
TCTCT	2																			2
TCTGC	1																			1
TCTGT	1																			1
TCTTA	4																			4
TCTTG	2																			2
TCTTT	18																			18
TGAAA	1																			1
TGAAC	1																			1
TGAAG	1																			1
TGAAT	7																			7
TGACA	1																			1
TGACG	1																			1
TGACT	1																			1
TGAGC	2																			2
TGATA	2																			2
TGATT	8																			8
TGCAG	1																			1
TGCTC	3																			3
TGCTG	1																			1
TGCTT	1																			1
TGGAG	3																			3
TGGGG	4																			4
TGGTT	2																			2
TGTAA	1																			1
TGTAT	2																			2
TGTCC	1																			1
TGTCT	2																			2
TGTGA	9																			9
TGTGG	1																			1
TGTGT	2																			2
TGTTA	1																			1
TGTTC	1																			1
TGTTG	1																			1
TGTTT	37																			37
TTAAT	1																			1
TTACA	3																			3
TTACC	1																			1
TTACT	2																			2
TTAGA	6																			6
TTAGC	5																			5
TTAGG	1																			1
TTAGT	2																			2
TTATA	3																			3
TTATC	16		1																	17
TTATG	1																			1
TTATT	11																			11
TTCAA	9																			9
TTCAG	2																			2
TTCCA	1																			1
TTCCC	2																			2
TTCCT	2																			2
TTCTA	4																			4
TTCTC	1																			1
TTCTG	1																			1
TTCTT	5																			5
TTGAA	3																			3
TTGAG	1																			1
TTGAT	3	1																		4
TTGCT	2																			2
TTGGA	1																			1
TTGGT	2																			2
TTGTA	1																			1
TTGTC	1																			1
TTGTG	2																			2
TTGTT	14																			14
TTTAA	1																			1
TTTAC	1																			1
TTTAT	15																			15
TTTCA	13																			13
TTTCC	2																			2
TTTCT	12																			12
TTTGA	8																			8
TTTGG	1																			1
TTTGT	20																			20
TTTTA	18																			18
TTTTC	19																			19
TTTTG	39																			39
AAAAAC	3																			3
AAAAAG	11																			11
AAAACA	2																			2
AAACAC		1																		1
AAAGAA		1																		1
AAAGAT	1																			1
AAAGTC	1																			1
AAATAC	1																			1
AAATCC	1																			1
AAATTC	1	1																		2
AAATTG	1																			1
AAATTT	1																			1
AACATG	1	1																		2
AACCCA		1																		1
AACTGT	1																			1
AAGAGG	1																			1
AAGATG	1																			1
AAGGTC	1																			1
AAGTCA	1																			1
AATAAA	2																			2
AATAAC	1	1																		2
AATAAG	1																			1
AATACA	1																			1
AATACT	1																			1
AATAGT	1																			1
AATCAG	9	5	1																	15
AATGAC	1																			1
AATTAA	1																			1
AATTCA	1																			1
AATTCC	1																			1
AATTTG	26	10	5																	41
ACAAAC	2																			2
ACAAGC	1																			1
ACACAA	2																			2
ACATAA	1																			1
ACCAGG	1																			1
ACCCCC	1																			1
ACGAGT	1																			1
ACTAAT	1																			1
ACTCAT	1																			1
AGAAAA	2	1																		3
AGAATC	5																			5
AGACAA	1																			1
AGACCT		1																		1
AGAGAC	1																			1
AGGCTA	1																			1
AGGGTT	1																			1
AGGTTT	1																			1
AGTAAC	1																			1
AGTATC	2																			2
AGTCAT	1																			1
AGTGAA	1																			1
ATAATC	1																			1
ATAGAA		1																		1
ATATAG		1																		1
ATCACT	1																			1
ATCAGA	6	9																		15
ATCATT	1																			1
ATGCAC	2																			2
ATGTGC	1																			1
ATTAGT	2																			2
ATTCAA	2		1																	3
ATTCTG	28	25	3																	56
ATTGAA		1																		1
ATTTTT	3																			3
CAAAAA	1																			1
CAAATT	2	1																		3
CAACCT	1																			1
CACACC	1																			1
CACAGC		1																		1
CACAGT	1																			1
CACGTC	1																			1
CAGAAT	2																			2
CAGCCT	1																			1
CAGCTT		1																		1
CAGGCT	1																			1
CATATT	1																			1
CATGCA	2																			2
CATGTT	1																			1
CATTAT	1																			1
CCCACA	1																			1
CCCCCA	2																			2
CCCCGT	1																			1
CCCGTT	1																			1
CCCTCA	1																			1
CCCTCC	1																			1
CCCTGC	1																			1
CCGACC	1																			1
CCTCAG	1																			1
CCTCTA	2																			2
CGGCCT	1																			1
CTCACT	1																			1
CTCCCA	1																			1
CTCCCT	1																			1
CTGAAG	1																			1
CTGCAC		1																		1
CTGTTG	1																			1
CTGTTT	1																			1
CTTAGA	2																			2
CTTCCT	1																			1
CTTCTC	1																			1
CTTTCA	1																			1
CTTTGA	1																			1
CTTTTG	1																			1
CTTTTT	5																			5
GAAAAA	2																			2
GAATCA	2	2	1																	5
GAATTA	1																			1
GACTTA	1																			1
GAGCAA	1																			1
GAGCAC	3																			3
GAGCCG	1																			1
GAGGCA	1																			1
GATAGA	1																			1
GATTCT	2																			2
GCAAAT	1																			1
GCACAC	1																			1
GCAGCT	1																			1
GCCTCC	1																			1
GCCTGG	1																			1
GCTCCA						1														1
GCTGCA	1																			1
GGAAGA	1																			1
GGAATA	1																			1
GGAGCT	1																			1
GGATGA	1																			1
GGCGGA		1																		1
GGGGGT	1																			1
GGTCAA	1																			1
GGTGCA	1																			1
GGTGGC	1																			1
GTAATA	1																			1
GTACTT	1																			1
GTAGTG	1																			1
GTCGTA	1																			1
GTCTTG	1																			1
GTGAAA	1																			1
GTGTTA	1																			1
GTTATT	1																			1
GTTTTT	8																			8
TAAAAA	1																			1
TAAATC	1																			1
TAACCC	1																			1
TAAGAA	2																			2
TAATAC		1																		1
TAATGC	1		1																	2
TAATTT	1																			1
TACAAA	1																			1
TACCTG	1																			1
TAGAAA	1																			1
TAGCAT	1																			1
TATCAA	1	1																		2
TATCTA	1																			1
TATGTC	1																			1
TCAAAT	4	1																		5
TCAAGG	1																			1
TCAGAA	5	8	1																	14
TCCGCC	1																			1
TCCTCT	4																			4
TCTGAT	1																			1
TCTGGC	1																			1
TCTGTG	1																			1
TCTTTA	1																			1
TCTTTT	3																			3
TGAAAG	1																			1
TGAACA	1																			1
TGAATG	1																			1
TGAATT		1																		1
TGACTT		1																		1
TGAGGT	1																			1
TGATAC	1																			1
TGATCA	1																			1
TGATTC	2																			2
TGCGTT	1																			1
TGCTGA	1																			1
TGGACC	1																			1
TGGATG	1																			1
TGTATT	1																			1
TGTGTT	1																			1
TGTTAA	1																			1
TGTTTG	1																			1
TGTTTT	2																			2
TTAGAG	1																			1
TTAGTT	1																			1
TTATGG	1																			1
TTATTG	1																			1
TTATTT	1																			1
TTCAAA	4	2		1																7
TTCAAG	1																			1
TTCAGA	1																			1
TTCATT	1																			1
TTCCAG	1	1																		2
TTCTGA	5	6		1																12
TTCTTT	1																			1
TTGAAC	1																			1
TTGACT	4	1																		5
TTGTAT	1																			1
TTGTGT	1																			1
TTTAAT	1																			1
TTTATA	1																			1
TTTCTT	4																			4
TTTGAA	1																			1
TTTGGC	1																			1
TTTGTA	1																			1
TTTGTC	1																			1
TTTGTG	1																			1
TTTTCA	1																			1
TTTTCT	1																			1
TTTTGT	2																			2
TTTTTA	1																			1
TTTTTC	3																			3

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	1
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	1
AC/GT	-	-	-	1417	655	327	193	1												2593
AG/CT	-	-	-	576	220	105	46													947
AT/AT	-	-	-	176	62	27	16													281
CG/CG	-	-	-	12	3															15
AAC/GTT	-	-	186	25																211
AAG/CTT	-	-	125	26																151
AAT/ATT	-	-	116	24																140
ACC/GGT	-	-	42	6																48
ACG/CGT	-	-	2																	2
ACT/AGT	-	-	18	5																23
AGC/CTG	-	-	92	17																109
AGG/CCT	-	-	100	17																117
ATC/ATG	-	-	67	21																88
CCG/CGG	-	-	5																	5
AAAC/GTTT	-	150																		150
AAAG/CTTT	-	65																		65
AAAT/ATTT	-	148																		148
AACC/GGTT	-	3																		3
AACG/CGTT	-	1																		1
AACT/AGTT	-	4																		4
AAGC/CTTG	-	4																		4
AAGG/CCTT	-	8																		8
AAGT/ACTT	-	12																		12
AATC/ATTG	-	21																		21
AATG/ATTC	-	14																		14
AATT/AATT	-	3																		3
ACAG/CTGT	-	14																		14
ACAT/ATGT	-	9																		9
ACCC/GGGT	-	5																		5
ACCT/AGGT	-	1																		1
ACGC/CGTG	-	6																		6
ACGT/ACGT	-	1																		1
ACTC/AGTG	-	15																		15
ACTG/AGTC	-	6																		6
AGAT/ATCT	-	11																		11
AGCC/CTGG	-	9																		9
AGCG/CGCT	-	3																		3
AGCT/AGCT	-	7																		7
AGGC/CCTG	-	6																		6
AGGG/CCCT	-	6																		6
ATCC/ATGG	-	37																		37
ATGC/ATGC	-	4																		4
CCCG/CGGG	-	1																		1
AAAAC/GTTTT	355																			355
AAAAG/CTTTT	120																			120
AAAAT/ATTTT	131																			131
AAACC/GGTTT	12																			12
AAACG/CGTTT	1																			1
AAACT/AGTTT	20																			20
AAAGC/CTTTG	8																			8
AAAGG/CCTTT	16																			16
AAAGT/ACTTT	10																			10
AAATC/ATTTG	42	1																		43
AAATG/ATTTC	36	1																		37
AAATT/AATTT	20																			20
AACAC/GTGTT	14																			14
AACAG/CTGTT	10																			10
AACAT/ATGTT	13																			13
AACCC/GGGTT	1																			1
AACCG/CGGTT	5																			5
AACCT/AGGTT	4																			4
AACGG/CCGTT	1																			1
AACGT/ACGTT	1																			1
AACTC/AGTTG	3																			3
AACTG/AGTTC	14																			14
AACTT/AAGTT	1																			1
AAGAC/CTTGT	15																			15
AAGAG/CTCTT	14																			14
AAGAT/ATCTT	50		1																	51
AAGCC/CTTGG	1																			1
AAGCG/CGCTT	1																			1
AAGCT/AGCTT	25																			25
AAGGC/CCTTG	3																			3
AAGGG/CCCTT	6																			6
AAGGT/ACCTT	4																			4
AAGTC/ACTTG	14																			14
AAGTG/ACTTC	13																			13
AATAC/ATTGT	14																			14
AATAG/ATTCT	34	1																		35
AATAT/ATATT	18																			18
AATCC/ATTGG	10																			10
AATCG/ATTCG	1																			1
AATCT/AGATT	39																			39
AATGC/ATTGC	1																			1
AATGG/ATTCC	4																			4
AATGT/ACATT	17																			17
AATTC/AATTG	71	1	1																	73
ACACC/GGTGT	6																			6
ACACT/AGTGT	10																			10
ACAGC/CTGTG	8																			8
ACAGG/CCTGT	5																			5
ACAGT/ACTGT	12																			12
ACATC/ATGTG	19																			19
ACATG/ATGTC	5																			5
ACCAG/CTGGT	3																			3
ACCAT/ATGGT	4																			4
ACCCC/GGGGT	15																			15
ACCCT/AGGGT	1																			1
ACCGG/CCGGT	2																			2
ACCTC/AGGTG	6																			6
ACCTG/AGGTC	5																			5
ACGAG/CGTCT	1																			1
ACGCC/CGTGG	1																			1
ACGGG/CCCGT	1																			1
ACGTC/ACGTG	3																			3
ACTAG/AGTCT	2																			2
ACTAT/AGTAT	13																			13
ACTCC/AGTGG	9																			9
ACTCG/AGTCG	1																			1
ACTCT/AGAGT	1																			1
ACTGC/AGTGC	5																			5
ACTGG/AGTCC	5																			5
AGAGC/CTCTG	14																			14
AGAGG/CCTCT	21																			21
AGATC/ATCTG	5																			5
AGATG/ATCTC	5																			5
AGCAT/ATGCT	4																			4
AGCCC/CTGGG	1																			1
AGCCT/AGGCT	4																			4
AGCGC/CGCTG	1																			1
AGCTC/AGCTG	7																			7
AGGAT/ATCCT	1																			1
AGGCC/CCTGG	1																			1
AGGCG/CCTCG	1																			1
AGGGC/CCCTG	3																			3
AGGGG/CCCCT	14																			14
ATATC/ATATG	10																			10
ATCCC/ATGGG	1																			1
ATCCG/ATCGG		1																		1
CCCGG/CCGGG	1																			1
AAAAAC/GTTTTT	18																			18
AAAAAG/CTTTTT	32	2																		34
AAAAAT/ATTTTT	8																			8
AAAACT/AGTTTT	1																			1
AAAAGC/CTTTTG	1																			1
AAAATG/ATTTTC	2																			2
AAAATT/AATTTT	3																			3
AAACAC/GTGTTT	8	1																		9
AAACAG/CTGTTT	1																			1
AAACAT/ATGTTT	1																			1
AAACCC/GGGTTT		1																		1
AAACCT/AGGTTT	1																			1
AAACGC/CGTTTG	1																			1
AAAGAC/CTTTGT	2																			2
AAAGAT/ATCTTT	2																			2
AAAGCC/CTTTGG	1																			1
AAAGTC/ACTTTG	7	2																		9
AAAGTG/ACTTTC	4																			4
AAATAC/ATTTGT	6																			6
AAATAG/ATTTCT	1	1																		2
AAATAT/ATATTT	1																			1
AAATCC/ATTTGG	1																			1
AAATCT/AGATTT	1																			1
AAATGC/ATTTGC	1																			1
AAATTC/AATTTG	41	16	6	1																64
AAATTG/AATTTC	1	1																		2
AAATTT/AAATTT	1																			1
AACAAT/ATTGTT	3	1																		4
AACACT/AGTGTT	1																			1
AACAGC/CTGTTG	1																			1
AACAGT/ACTGTT	1																			1
AACATG/ATGTTC	3	1																		4
AACATT/AATGTT	1																			1
AACCAT/ATGGTT	1																			1
AACCCT/AGGGTT	2																			2
AACCTC/AGGTTG	2																			2
AACGGG/CCCGTT	1																			1
AACTCT/AGAGTT	1																			1
AACTGG/AGTTCC	1	1																		2
AACTGT/ACAGTT	1																			1
AACTTG/AAGTTC	2																			2
AAGAAT/ATTCTT	3																			3
AAGACC/CTTGGT	1																			1
AAGAGC/CTCTTG	1																			1
AAGAGG/CCTCTT	7																			7
AAGATG/ATCTTC	1																			1
AAGCAC/CTTGTG	1																			1
AAGCTG/AGCTTC	1	1																		2
AAGGAG/CCTTCT	1																			1
AAGGCT/AGCCTT	1																			1
AAGGTC/ACCTTG	3																			3
AAGTAC/ACTTGT	1																			1
AAGTCT/ACTTAG	3																			3
AATACT/AGTATT	4	1																		5
AATAGG/ATTCCT	1																			1
AATAGT/ACTATT	2																			2
AATATC/ATATTG	1	1																		2
AATATG/ATATTC	1																			1
AATCAG/ATTCTG	67	55	6	1																129
AATCAT/ATGATT	1																			1
AATCTG/AGATTC	1																			1
AATGAC/ATTGTC	1																			1
AATGAT/ATCATT	2																			2
AATGCT/AGCATT	2		1																	3
AATGTG/ACATTC	1																			1
AATTAG/AATTCT	1																			1
AATTCC/AATTGG	1																			1
ACACAG/CTGTGT	1																			1
ACACCC/GGGTGT	2																			2
ACACGC/CGTGTG	1																			1
ACAGAG/CTCTGT	1																			1
ACAGCC/CTGTGG		1																		1
ACAGGT/ACCTGT	1																			1
ACAGTC/ACTGTG	1																			1
ACATAG/ATGTCT	1																			1
ACATCC/ATGTGG	1																			1
ACATGC/ATGTGC	5																			5
ACCACT/AGTGGT	1																			1
ACCAGG/CCTGGT	1																			1
ACCCCC/GGGGGT	4																			4
ACCCCG/CGGGGT	1																			1
ACCCTC/AGGGTG	1																			1
ACCGCC/CGGTGG	1																			1
ACCTAG/AGGTCT		1																		1
ACCTCT/AGAGGT	2																			2
ACCTGC/AGGTGC	1	1																		2
ACCTGG/AGGTCC	1																			1
ACGACT/AGTCGT	1																			1
ACGAGC/CGTGCT	3																			3
ACGAGT/ACTCGT	1																			1
ACGGGG/CCCCGT	1																			1
ACGTCC/ACGTGG	1																			1
ACTATC/AGTGAT	1																			1
ACTATG/AGTCAT	1																			1
ACTCAT/AGTATG	1																			1
ACTCCC/AGTGGG	1																			1
ACTCTC/AGAGTG	1																			1
ACTGAT/AGTATC	3																			3
AGAGAT/ATCTCT	1																			1
AGAGCC/CTCTGG	1																			1
AGAGGC/CCTCTG	1																			1
AGAGGG/CCCTCT	1																			1
AGATAT/ATATCT	1	1																		2
AGCATC/ATGCTG	1																			1
AGCCGG/CCGGCT	1																			1
AGCCTC/AGGCTG	2																			2
AGCCTG/AGGCTC	1																			1
AGCTCC/AGCTGG	1					1														2
AGCTGC/AGCTGC	2																			2
AGGATG/ATCCTC	1																			1
AGGCCC/CCTGGG	1																			1
AGGCCG/CCTCGG	1																			1
AGGCGG/CCGCCT	2	1																		3
AGGGGC/CCCCTG	1																			1
AGGGGG/CCCCCT	1																			1
ATCATG/ATCATG	1																			1
