Specifications
==============

Sequence source file: "/srv/lustre01/project/qmm_mm_pet-j9cm8n271e4/shared/webserver/new-megassr-v5/results/6ae3a5ef4ebbe/fasta/6ae3a5ef4ebbe_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              61923
Total size of examined sequences (bp):           73425564
Total number of identified SSRs:                 7093
Number of SSR containing sequences:              6370
Number of sequences containing more than 1 SSR:  627
Number of SSRs present in compound formation:    154


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	1
2	3753
3	863
4	610
5	1410
6	456

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	total
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-			1	1
AC	-	-	-	350	179	101	52														682
AG	-	-	-	135	70	37	14														256
AT	-	-	-	111	47	16	8														182
CA	-	-	-	319	127	61	42														549
CG	-	-	-	7	2	2	1														12
CT	-	-	-	166	56	31	14														267
GA	-	-	-	111	41	24	7														183
GC	-	-	-	7	1	1															9
GT	-	-	-	269	120	74	51	1													515
TA	-	-	-	72	35	21	4														132
TC	-	-	-	124	56	27	15														222
TG	-	-	-	421	172	105	46														744
AAC	-	-	38	9																	47
AAG	-	-	30	3																	33
AAT	-	-	28	7																	35
ACA	-	-	32	6																	38
ACC	-	-	3																		3
ACT	-	-	2																		2
AGA	-	-	11	2																	13
AGC	-	-	15	4																	19
AGG	-	-	8	1																	9
AGT	-	-	6	2																	8
ATA	-	-	8																		8
ATC	-	-	11	2																	13
ATG	-	-	19	2																	21
ATT	-	-	22	5																	27
CAA	-	-	19	6																	25
CAC	-	-	4	2																	6
CAG	-	-	19	4																	23
CAT	-	-	16	2																	18
CCA	-	-	4	2																	6
CCG	-	-	1																		1
CCT	-	-	17	2																	19
CGC	-	-		1																	1
CGT	-	-	1																		1
CTA	-	-	2																		2
CTC	-	-	23	5																	28
CTG	-	-	10	4																	14
CTT	-	-	29	4																	33
GAA	-	-	14	7																	21
GAG	-	-	18	3																	21
GAT	-	-	15	3																	18
GCA	-	-	16	3																	19
GCC	-	-	2	1																	3
GCT	-	-	19	4																	23
GGA	-	-	12	6																	18
GGC	-	-	1																		1
GGT	-	-	6	1																	7
GTA	-	-	1	2																	3
GTC	-	-	1																		1
GTG	-	-	7	5																	12
GTT	-	-	17	5																	22
TAA	-	-	12																		12
TAC	-	-	5																		5
TAG	-	-	2																		2
TAT	-	-	16	4																	20
TCA	-	-	20	3																	23
TCC	-	-	12	3																	15
TCT	-	-	16	5																	21
TGA	-	-	12	5																	17
TGC	-	-	11	3																	14
TGG	-	-	3	1																	4
TGT	-	-	26	2																	28
TTA	-	-	19	3																	22
TTC	-	-	15	2																	17
TTG	-	-	31	10																	41
AAAC	-	55																			55
AAAG	-	17																			17
AAAT	-	32																			32
AACA	-	12																			12
AACC	-	1																			1
AACT	-	1																			1
AAGA	-	4																			4
AAGT	-	4																			4
AATA	-	21																			21
AATC	-	2																			2
AATG	-	3																			3
AATT	-	1																			1
ACAA	-	4																			4
ACAG	-	3																			3
ACAT	-	3																			3
AGAA	-	7																			7
AGAC	-	1																			1
AGGA	-	2																			2
AGGC	-	1																			1
AGGG	-	1																			1
AGTA	-	1																			1
AGTC	-	1																			1
AGTG	-	4																			4
AGTT	-	1																			1
ATAA	-	7																			7
ATAC	-	1																			1
ATAG	-	1																			1
ATCA	-	1																			1
ATCC	-	5																			5
ATCT	-	2																			2
ATGA	-	1																			1
ATGC	-	3																			3
ATGG	-	9																			9
ATGT	-	4																			4
ATTA	-	1																			1
ATTC	-	3																			3
ATTG	-	6																			6
ATTT	-	34																			34
CAAA	-	20																			20
CAAG	-	1																			1
CAAT	-	5																			5
CACT	-	2																			2
CAGA	-	6																			6
CAGG	-	1																			1
CAGT	-	2																			2
CATA	-	1																			1
CATC	-	8																			8
CATT	-	1																			1
CCAG	-	2																			2
CCAT	-	2																			2
CCCT	-	2																			2
CCTC	-	3																			3
CCTT	-	1																			1
CGTA	-	1																			1
CTAA	-	1																			1
CTCC	-	4																			4
CTGA	-	2																			2
CTGC	-	1																			1
CTGT	-	5																			5
CTTC	-	5																			5
CTTT	-	16																			16
GAAA	-	2																			2
GAAG	-	2																			2
GAAT	-	2																			2
GACA	-	3																			3
GAGG	-	2																			2
GATA	-	1																			1
GATC	-	1																			1
GATG	-	5																			5
GATT	-	1																			1
GCAG	-	1																			1
GCAT	-	1																			1
GCCC	-	1																			1
GCTG	-	1																			1
GGAA	-	3																			3
GGAT	-	3																			3
GGCA	-	1																			1
GGGA	-	1																			1
GGGT	-	1																			1
GGTA	-	2																			2
GTAA	-	5																			5
GTAG	-	1																			1
GTAT	-	6																			6
GTCT	-	7																			7
GTGA	-	3																			3
GTTG	-	1																			1
GTTT	-	12																			12
TAAA	-	14																			14
TAAC	-	2																			2
TAAG	-	2																			2
TAAT	-	1																			1
TAGA	-	2																			2
TAGC	-	1																			1
TATC	-	1																			1
TATG	-	1																			1
TATT	-	12																			12
TCAA	-	3																			3
TCAC	-	1																			1
TCAG	-	1																			1
TCAT	-	1																			1
TCCA	-	3																			3
TCCT	-	3																			3
TCGA	-	1																			1
TCTA	-	1																			1
TCTG	-	3																			3
TGAA	-	3																			3
TGAG	-	1																			1
TGAT	-	2																			2
TGCC	-	1																			1
TGCT	-	1																			1
TGGA	-	5																			5
TGTA	-	1																			1
TGTC	-	1																			1
TGTT	-	14																			14
TTAC	-	4	1																		5
TTAG	-	2																			2
TTAT	-	11																			11
TTCA	-	3																			3
TTCC	-	3																			3
TTCT	-	1																			1
TTGA	-	3																			3
TTGG	-	2																			2
TTGT	-	13																			13
TTTA	-	19																			19
TTTC	-	5																			5
TTTG	-	40																			40
AAAAC	115																				115
AAAAG	32																				32
AAAAT	27																				27
AAACA	20																				20
AAACC	3																				3
AAACT	7																				7
AAAGA	10																				10
AAAGC	4																				4
AAAGG	2																				2
AAATA	12																				12
AAATC	3	1																			4
AAATG	3																				3
AACAA	7																				7
AACAC	2																				2
AACCA	1																				1
AACTA	1																				1
AACTG	1																				1
AAGAA	4																				4
AAGAC	2																				2
AAGAG	2																				2
AAGAT	5																				5
AAGCA	1																				1
AAGCT	1																				1
AAGGA	2																				2
AAGTA	1																				1
AAGTC	3																				3
AAGTG	1																				1
AAGTT	1																				1
AATAA	9																				9
AATAC	2																				2
AATAG	4																				4
AATAT	3																				3
AATCC	1																				1
AATCT	2																				2
AATGA	2																				2
AATGT	4																				4
AATTA	2																				2
AATTC	7																				7
AATTG	22																				22
AATTT	5																				5
ACAAA	9																				9
ACAAG	1																				1
ACAAT	3																				3
ACACA	3																				3
ACAGA	1																				1
ACAGC	2																				2
ACAGT	2																				2
ACCAA	1																				1
ACCTG	1																				1
ACTAC	1																				1
ACTAT	2																				2
ACTGG	3																				3
ACTGT	2																				2
ACTTG	2																				2
AGAAA	9																				9
AGAAC	1																				1
AGAAT	6																				6
AGACA	1																				1
AGAGA	1																				1
AGAGC	1																				1
AGAGG	2																				2
AGATA	4																				4
AGATC	1																				1
AGATG	1																				1
AGATT	1																				1
AGCAA	2																				2
AGCAG	2																				2
AGCTA	5																				5
AGCTG	2																				2
AGCTT	1																				1
AGGAA	1																				1
AGGAG	4																				4
AGGGG	2																				2
AGGTG	1																				1
AGTAA	3																				3
AGTAC	2																				2
AGTAT	2																				2
AGTGC	1																				1
AGTGG	1																				1
AGTGT	1																				1
AGTTC	2																				2
AGTTG	1																				1
AGTTT	3																				3
ATAAA	9																				9
ATAAC	1																				1
ATAAG	10																				10
ATACA	6																				6
ATACC	1																				1
ATAGA	6																				6
ATATC	2																				2
ATATG	1																				1
ATCAA	4																				4
ATCAC	1																				1
ATCCA	2																				2
ATCTA	13																				13
ATCTG	1																				1
ATCTT	2																				2
ATGAA	1																				1
ATGAG	1																				1
ATGAT	1																				1
ATGCC	1																				1
ATGTA	2																				2
ATGTC	1																				1
ATGTG	3																				3
ATTAA	2																				2
ATTAG	7																				7
ATTAT	3																				3
ATTCA	5																				5
ATTCC	1																				1
ATTCT	5																				5
ATTGA	2																				2
ATTGT	4																				4
ATTTA	2																				2
ATTTC	1																				1
ATTTG	7																				7
ATTTT	27																				27
CAAAA	15																				15
CAAAG	1																				1
CAAAT	3																				3
CAACA	1																				1
CAACC	1																				1
CAACT	1																				1
CAAGT	1																				1
CAATA	1																				1
CAATC	1																				1
CAATG	1																				1
CAATT	4																				4
CACAA	2																				2
CACAC	1																				1
CACCT	1																				1
CACTC	1																				1
CAGAG	1																				1
CAGCA	1																				1
CAGCC	1																				1
CAGGC	1																				1
CAGGT	1																				1
CAGTA	1																				1
CAGTG	1																				1
CAGTT	1																				1
CATAC	1																				1
CATCA	1																				1
CATGA	1																				1
CATGT	1																				1
CATTA	1																				1
CATTG	1																				1
CATTT	2																				2
CCAAA	1																				1
CCACC	1																				1
CCACG	1																				1
CCACT	1																				1
CCAGA	1																				1
CCCCA	3																				3
CCCTC	1																				1
CCCTG	1																				1
CCTCA	1																				1
CCTGA	1																				1
CCTGG	1																				1
CCTTC	1																				1
CCTTG	1																				1
CGAAC	3																				3
CGATA	1																				1
CGATT	1																				1
CGCCC	1																				1
CGCCT	1																				1
CGGAA	1																				1
CGGTG	1																				1
CGTGA	1																				1
CTAAA	3																				3
CTAAT	2																				2
CTAGA	1																				1
CTAGC	1																				1
CTATA	1																				1
CTATT	4																				4
CTCAG	1																				1
CTCCA	1																				1
CTCCT	1																				1
CTCTC	4																				4
CTCTT	1																				1
CTGAA	2																				2
CTGAC	3																				3
CTGCT	3																				3
CTGGA	1																				1
CTGGG	1																				1
CTGGT	1																				1
CTGTG	1																				1
CTGTT	1																				1
CTTAT	1																				1
CTTCA	1																				1
CTTCC	1																				1
CTTCT	5																				5
CTTGA	1																				1
CTTGC	1																				1
CTTGT	5																				5
CTTTC	8																				8
CTTTG	2																				2
CTTTT	15																				15
GAAAA	6																				6
GAAAG	1																				1
GAAAT	2																				2
GAACA	2																				2
GAACC	2																				2
GAAGA	1																				1
GAAGT	1																				1
GAATA	1																				1
GAATT	3																				3
GACAA	2																				2
GACAG	2																				2
GAGAG	4																				4
GAGAT	1																				1
GAGCT	1																				1
GAGGA	1																				1
GAGGG	3																				3
GATAA	1																				1
GATAT	1																				1
GATCA	1																				1
GATGA	2																				2
GATTA	1																				1
GATTG	4																				4
GATTT	2																				2
GCACA	1																				1
GCAGG	1																				1
GCATG	1																				1
GCCAA	1																				1
GCCGA	1																				1
GCCTG	1																				1
GCCTT	1																				1
GCGTG	1																				1
GCTAA	11																				11
GCTCA	1																				1
GCTCG	1																				1
GCTGA	2																				2
GCTGT	2																				2
GGAAA	1																				1
GGACA	1																				1
GGAGA	3																				3
GGAGG	1																				1
GGCAG	1																				1
GGCGA	1																				1
GGCTG	3																				3
GGGGT	2																				2
GGGTG	1																				1
GGGTT	1																				1
GGTAG	1																				1
GGTGA	1																				1
GGTTT	1																				1
GTACT	1																				1
GTATG	1																				1
GTCAA	2																				2
GTCTG	1																				1
GTGAT	1																				1
GTGCA	1																				1
GTGGA	1																				1
GTGGG	1																				1
GTGTC	1																				1
GTTCA	2																				2
GTTCT	1																				1
GTTTG	1																				1
GTTTT	30																				30
TAAAA	8																				8
TAAAC	3																				3
TAAAG	1																				1
TAAAT	1																				1
TAACA	2																				2
TAAGA	9																				9
TAAGC	1																				1
TAATA	1																				1
TAATC	2																				2
TAATG	2																				2
TAATT	1																				1
TACAA	3																				3
TACAG	1																				1
TACAT	1																				1
TACCA	1																				1
TACTG	2																				2
TACTT	1																				1
TAGAA	11																				11
TAGAT	1																				1
TAGCA	1																				1
TAGCC	1																				1
TAGCT	4																				4
TAGTA	2																				2
TAGTT	2																				2
TATAA	4																				4
TATAC	3																				3
TATAG	1																				1
TATAT	1																				1
TATCA	2																				2
TATCT	4	1																			5
TATGT	2																				2
TATTA	1																				1
TATTC	9																				9
TATTG	2																				2
TATTT	13																				13
TCAAA	5																				5
TCAAG	4																				4
TCAAT	5																				5
TCACA	8																				8
TCACT	1																				1
TCAGA	1																				1
TCAGC	2																				2
TCAGT	1																				1
TCATA	1																				1
TCATC	2																				2
TCATG	1																				1
TCATT	2																				2
TCCAA	2																				2
TCCAC	2																				2
TCCAT	1																				1
TCCCA	1																				1
TCCCC	2																				2
TCCTG	2																				2
TCCTT	2																				2
TCGGG	1																				1
TCTAA	1																				1
TCTAC	1																				1
TCTAG	1																				1
TCTAT	3																				3
TCTCA	1																				1
TCTCC	6																				6
TCTGA	1																				1
TCTGC	1																				1
TCTGG	1																				1
TCTTA	2																				2
TCTTC	4																				4
TCTTT	16																				16
TGAAA	2																				2
TGAAC	1																				1
TGAAG	2																				2
TGAAT	5																				5
TGAGA	1																				1
TGAGC	1																				1
TGAGT	1																				1
TGATA	1																				1
TGATC	1																				1
TGATG	3																				3
TGATT	6																				6
TGCAG	1																				1
TGCCT	1																				1
TGCTA	1																				1
TGCTG	1																				1
TGCTT	4																				4
TGGAG	2																				2
TGGGC	1																				1
TGGGG	3																				3
TGGTA	1																				1
TGGTC	1																				1
TGGTT	1																				1
TGTAC	1																				1
TGTCA	2																				2
TGTCT	2																				2
TGTGA	1																				1
TGTGG	1																				1
TGTGT	1																				1
TGTTC	1																				1
TGTTG	3																				3
TGTTT	52																				52
TTAAA	2																				2
TTAAT	1																				1
TTACA	2																				2
TTACC				1																	1
TTACT	1																				1
TTAGA	3																				3
TTAGC	4																				4
TTATC	19																				19
TTATG	5																				5
TTATT	6																				6
TTCAA	12																				12
TTCAG	5																				5
TTCAT	4																				4
TTCCA	1																				1
TTCCT	2																				2
TTCTA	3																				3
TTCTG	1																				1
TTCTT	9																				9
TTGAA	4																				4
TTGAC	1																				1
TTGAT	1																				1
TTGCA	1																				1
TTGGG	1																				1
TTGTA	3																				3
TTGTC	1																				1
TTGTG	1																				1
TTGTT	16																				16
TTTAA	2																				2
TTTAC	4																				4
TTTAG	2																				2
TTTAT	14																				14
TTTCA	1																				1
TTTCC	4																				4
TTTCT	14																				14
TTTGA	4																				4
TTTGC	2																				2
TTTGG	1																				1
TTTGT	17																				17
TTTTA	20																				20
TTTTC	25																				25
TTTTG	46																				46
AAAAAC	4																				4
AAAAAG	10																				10
AAAAAT	1																				1
AAAACA	2																				2
AAAACC	1																				1
AAAACT	1																				1
AAAAGA	2																				2
AAAATC	1																				1
AAAATG	1																				1
AAACAC	1																				1
AAACTA	1																				1
AAACTG	3																				3
AAAGAG	1																				1
AAAGGA	1																				1
AAATAA	1																				1
AAATAT	1																				1
AAATCA	1																				1
AAATGA	2																				2
AAATTC	5	1																			6
AAATTG	1																				1
AACATG	1																				1
AACATT	1																				1
AACCAA	1																				1
AACTGT	1																				1
AACTTT	1																				1
AAGCTA	1																				1
AAGTCA	1	1																			2
AAGTTC	1																				1
AATAAA	1																				1
AATAAC	1																				1
AATAAG	1																				1
AATACA	1																				1
AATCAG	5	4	1																		10
AATCCA	1																				1
AATCCT	1																				1
AATCTT	1																				1
AATGCA	1																				1
AATTAC	1																				1
AATTCA	1	1																			2
AATTTG	24	4	3	1																	32
ACAAAC	1																				1
ACAATT	1																				1
ACACAG	2																				2
ACACCT	1																				1
ACAGAG	1																				1
ACATTG	1																				1
ACCTTG	2																				2
ACGAGT	2																				2
ACTTTG	2																				2
AGAAAA	1																				1
AGAAAC	1																				1
AGAAAG	1																				1
AGAATC	6	1				1															8
AGATAT	1																				1
AGCACA	1																				1
AGGACG	1																				1
AGGATT	1																				1
AGGGTC	1																				1
AGGTCC	1																				1
AGTACC	1																				1
AGTCAA		1																			1
AGTGAA	1																				1
AGTTAT		1																			1
AGTTCA	2																				2
ATAAAA	1																				1
ATAAAC	1																				1
ATAATG	2																				2
ATAGAT	1																				1
ATATCA	1																				1
ATATCC	1																				1
ATCAAG	1																				1
ATCAGA	7	8	2																		17
ATGAAT	1																				1
ATGCAG	1																				1
ATTAAG	1																				1
ATTACA	1																				1
ATTACT	1																				1
ATTAGT	1																				1
ATTATG	1																				1
ATTCAA	3		1																		4
ATTCAG	1																				1
ATTCTG	24	13	1																		38
ATTCTT	2	1																			3
ATTTCT	1																				1
ATTTTG	1																				1
ATTTTT	1																				1
CAAAAA	1																				1
CAAATA	1																				1
CAAATG	1																				1
CAAATT		2																			2
CAACAC	1																				1
CAACTT	1																				1
CAAGAC	1																				1
CAATAA	1																				1
CAATTT	1																				1
CACATT	1																				1
CACCTC	1																				1
CAGAAT	2	1																			3
CAGACA	2																				2
CAGAGA	1																				1
CAGCAC	1																				1
CAGCCT	1																				1
CAGGAA	1																				1
CATAGT	1	1																			2
CATCCC	1																				1
CATGGG	1																				1
CATGTA	1																				1
CATGTT	2																				2
CATTAG	1																				1
CATTAT	1																				1
CCACTG	1																				1
CCATTT	1																				1
CCGATA	1																				1
CCTCCG	1																				1
CCTGTC	1																				1
CGAGGA	1																				1
CGTGCA		1																			1
CTCCAC	1																				1
CTCCTA	1																				1
CTCCTT	1																				1
CTGATT		1																			1
CTGCAC	1																				1
CTGCCT	1																				1
CTGTGG	1																				1
CTTGAA	2																				2
CTTTTT	5																				5
GAAAAA	1																				1
GAACAG	1																				1
GAATCA	3																				3
GACCAG	1		1																		2
GACTGG	1																				1
GAGAAG	1																				1
GAGCAC	2																				2
GAGGAA	2																				2
GATATT	1																				1
GATGAA	1																				1
GATTCT	2																				2
GCAAAT		1																			1
GCACAT		1																			1
GCACCA	1																				1
GCAGGT	2																				2
GCTAGC	1																				1
GCTCTT	1																				1
GCTGCA	1																				1
GCTTCA	2																				2
GCTTCT	1																				1
GGACCA		1																			1
GGAGGT	1																				1
GGTCTC	1																				1
GGTGCA		1																			1
GGTGGA	1																				1
GGTGGC	1																				1
GTAATA			1																		1
GTACCT	1																				1
GTACTC	2																				2
GTACTT	1																				1
GTCAAA		1																			1
GTCACT	1																				1
GTGCCA	1																				1
GTGTAT	1																				1
GTGTGC	1																				1
GTTTTG	1																				1
GTTTTT	8																				8
TAAAAA	2																				2
TAAATG		1																			1
TAAGAT	1																				1
TACAGT	1																				1
TACATG	2																				2
TACTGT	1																				1
TAGCTG	1																				1
TAGGAT	1																				1
TAGTAA	1																				1
TAGTAT	1																				1
TATCGG	1																				1
TATGAG	1																				1
TATGTG	1																				1
TATGTT	1		1																		2
TATTAG	1																				1
TATTCT	1																				1
TATTTA	1																				1
TATTTC	1																				1
TATTTT	1																				1
TCAAAT	1	1	1																		3
TCAGAA	1	12																			13
TCAGTA	1																				1
TCCAGG	1																				1
TCTAAT	1																				1
TCTACA	1																				1
TCTATA	1																				1
TCTCCA		1																			1
TCTCTA	1																				1
TCTCTT	1																				1
TCTGAA		1																			1
TCTTCA	1																				1
TCTTCC	1																				1
TCTTTT	3																				3
TGAAAG	1																				1
TGAAGA	1																				1
TGATTC	1																				1
TGCAAA	1																				1
TGCAGT	1																				1
TGCATG	1																				1
TGCTAA		1																			1
TGTATG	1																				1
TGTCAT	1																				1
TGTCTT	1																				1
TGTGTC	1																				1
TGTTAC	1																				1
TGTTTT	3																				3
TTAAGG	1																				1
TTAAGT	1																				1
TTACTA	1																				1
TTAGAG	1																				1
TTAGAT		1																			1
TTAGGG	1																				1
TTATGG	1																				1
TTATTT	1																				1
TTCAAA	6	1																			7
TTCAGA	1																				1
TTCTCT	1																				1
TTCTGA	11	10	2																		23
TTCTTT	1																				1
TTGACC	1																				1
TTGACT	3																				3
TTGTAC	1																				1
TTGTGC	1																				1
TTGTTA		1																			1
TTTAGT	1																				1
TTTCTT	1																				1
TTTGCT	1																				1
TTTGGC	1																				1
TTTGTA	1																				1
TTTTCA	2																				2
TTTTCT	2	1																			3
TTTTGA	1																				1
TTTTGC	1																				1
TTTTTC	1																				1
TTTTTG	3																				3

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-			1	1
AC/GT	-	-	-	1359	598	341	191	1													2490
AG/CT	-	-	-	536	223	119	50														928
AT/AT	-	-	-	183	82	37	12														314
CG/CG	-	-	-	14	3	3	1														21
AAC/GTT	-	-	163	38																	201
AAG/CTT	-	-	115	23																	138
AAT/ATT	-	-	105	19																	124
ACC/GGT	-	-	27	11																	38
ACG/CGT	-	-	2																		2
ACT/AGT	-	-	18	4																	22
AGC/CTG	-	-	90	22																	112
AGG/CCT	-	-	90	20																	110
ATC/ATG	-	-	93	17																	110
CCG/CGG	-	-	4	2																	6
AAAC/GTTT	-	170																			170
AAAG/CTTT	-	52																			52
AAAT/ATTT	-	150																			150
AACC/GGTT	-	4																			4
AACT/AGTT	-	7																			7
AAGC/CTTG	-	2																			2
AAGG/CCTT	-	19																			19
AAGT/ACTT	-	16	1																		17
AATC/ATTG	-	23																			23
AATG/ATTC	-	17																			17
AATT/AATT	-	3																			3
ACAG/CTGT	-	29																			29
ACAT/ATGT	-	17																			17
ACCC/GGGT	-	1																			1
ACCT/AGGT	-	3																			3
ACGT/ACGT	-	1																			1
ACTC/AGTG	-	11																			11
ACTG/AGTC	-	6																			6
AGAT/ATCT	-	8																			8
AGCC/CTGG	-	3																			3
AGCT/AGCT	-	1																			1
AGGC/CCTG	-	6																			6
AGGG/CCCT	-	13																			13
ATCC/ATGG	-	40																			40
ATCG/ATCG	-	2																			2
ATGC/ATGC	-	4																			4
CCCG/CGGG	-	1																			1
AAAAC/GTTTT	327																				327
AAAAG/CTTTT	140																				140
AAAAT/ATTTT	145																				145
AAACC/GGTTT	10																				10
AAACT/AGTTT	21																				21
AAAGC/CTTTG	16																				16
AAAGG/CCTTT	23																				23
AAAGT/ACTTT	11																				11
AAATC/ATTTG	35	1																			36
AAATG/ATTTC	20																				20
AAATT/AATTT	18																				18
AACAC/GTGTT	13																				13
AACAG/CTGTT	8																				8
AACAT/ATGTT	10																				10
AACCC/GGGTT	3																				3
AACCG/CGGTT	5																				5
AACGG/CCGTT	1																				1
AACTC/AGTTG	3																				3
AACTG/AGTTC	15																				15
AACTT/AAGTT	1																				1
AAGAC/CTTGT	14																				14
AAGAG/CTCTT	14																				14
AAGAT/ATCTT	57	1																			58
AAGCC/CTTGG	1																				1
AAGCT/AGCTT	27																				27
AAGGC/CCTTG	4																				4
AAGGG/CCCTT	2																				2
AAGGT/ACCTT				1																	1
AAGTC/ACTTG	14																				14
AAGTG/ACTTC	6																				6
AATAC/ATTGT	24																				24
AATAG/ATTCT	52																				52
AATAT/ATATT	13																				13
AATCC/ATTGG	10																				10
AATCG/ATTCG	1																				1
AATCT/AGATT	33																				33
AATGC/ATTGC	3																				3
AATGG/ATTCC	3																				3
AATGT/ACATT	12																				12
AATTC/AATTG	69																				69
ACACC/GGTGT	2																				2
ACACG/CGTGT	1																				1
ACACT/AGTGT	2																				2
ACAGC/CTGTG	8																				8
ACAGG/CCTGT	5																				5
ACAGT/ACTGT	12																				12
ACATC/ATGTG	18																				18
ACATG/ATGTC	6																				6
ACCAG/CTGGT	5																				5
ACCAT/ATGGT	5																				5
ACCCC/GGGGT	11																				11
ACCCG/CGGGT	1																				1
ACCCT/AGGGT	1																				1
ACCGC/CGGTG	1																				1
ACCTC/AGGTG	4																				4
ACCTG/AGGTC	6																				6
ACGAT/ATCGT	1																				1
ACGCC/CGTGG	2																				2
ACGTC/ACGTG	1																				1
ACTAG/AGTCT	2																				2
ACTAT/AGTAT	11																				11
ACTCC/AGTGG	9																				9
ACTCT/AGAGT	1																				1
ACTGC/AGTGC	4																				4
ACTGG/AGTCC	4																				4
AGAGC/CTCTG	8																				8
AGAGG/CCTCT	25																				25
AGATC/ATCTG	6																				6
AGATG/ATCTC	9																				9
AGCAT/ATGCT	2																				2
AGCCC/CTGGG	6																				6
AGCCG/CGGCT	2																				2
AGCCT/AGGCT	2																				2
AGCTC/AGCTG	10																				10
AGGCC/CCTGG	3																				3
AGGCG/CCTCG	2																				2
AGGGC/CCCTG	3																				3
AGGGG/CCCCT	9																				9
ATATC/ATATG	9																				9
ATCCC/ATGGG	1																				1
ATGCC/ATGGC	2																				2
CCCCG/CGGGG	1																				1
AAAAAC/GTTTTT	21																				21
AAAAAG/CTTTTT	27	1																			28
AAAAAT/ATTTTT	9																				9
AAAACC/GGTTTT	3																				3
AAAACT/AGTTTT	3																				3
AAAAGC/CTTTTG	2																				2
AAAAGG/CCTTTT	1																				1
AAAATC/ATTTTG	4																				4
AAAATG/ATTTTC	5																				5
AAACAC/GTGTTT	2																				2
AAACAG/CTGTTT	1																				1
AAACAT/ATGTTT	2		1																		3
AAACTG/AGTTTC	3																				3
AAACTT/AAGTTT	1																				1
AAAGAC/CTTTGT	1																				1
AAAGAG/CTCTTT	4																				4
AAAGCC/CTTTGG	1																				1
AAAGCT/AGCTTT	1																				1
AAAGTC/ACTTTG	6	3																			9
AAAGTG/ACTTTC	2																				2
AAAGTT/AACTTT	1																				1
AAATAC/ATTTGT	3																				3
AAATAG/ATTTCT	2																				2
AAATAT/ATATTT	2																				2
AAATCC/ATTTGG	1																				1
AAATCT/AGATTT		1																			1
AAATGC/ATTTGC	3	1																			4
AAATGG/ATTTCC	1																				1
AAATGT/ACATTT		1																			1
AAATTC/AATTTG	40	10	5	1																	56
AAATTG/AATTTC	2																				2
AACAAT/ATTGTT	2	1																			3
AACACC/GGTGTT	1																				1
AACAGG/CCTGTT	2																				2
AACAGT/ACTGTT	2																				2
AACATG/ATGTTC	3																				3
AACATT/AATGTT	1																				1
AACCAT/ATGGTT	1																				1
AACCCT/AGGGTT	1																				1
AACCTT/AAGGTT	1																				1
AACTAT/AGTTAT		1																			1
AACTCT/AGAGTT	1																				1
AACTGC/AGTTGC	1																				1
AACTGT/ACAGTT	2																				2
AACTTC/AAGTTG	1																				1
AACTTG/AAGTTC	5																				5
AAGAAT/ATTCTT	4	1																			5
AAGACC/CTTGGT	1																				1
AAGAGC/CTCTTG	1																				1
AAGAGG/CCTCTT	3																				3
AAGATC/ATCTTG	1																				1
AAGATG/ATCTTC	3																				3
AAGATT/AATCTT	3																				3
AAGCAC/CTTGTG	2																				2
AAGCAG/CTGCTT	1																				1
AAGCTG/AGCTTC	2																				2
AAGGAG/CCTTCT	2																				2
AAGGTC/ACCTTG	3																				3
AAGTAC/ACTTGT	2																				2
AATACT/AGTATT	3																				3
AATAGT/ACTATT	3		1																		4
AATATC/ATATTG	2																				2
AATATG/ATATTC	1																				1
AATCAG/ATTCTG	62	50	6			1															119
AATCAT/ATGATT	1																				1
AATCCT/AGGATT	3																				3
AATCTG/AGATTC	2	1																			3
AATGAC/ATTGTC	1																				1
AATGAT/ATCATT	3																				3
AATGCT/AGCATT	1	1																			2
AATGTC/ACATTG	1																				1
AATGTG/ACATTC	1																				1
AATTAC/AATTGT	3																				3
AATTAG/AATTCT	1																				1
ACACAG/CTGTGT	5																				5
ACACAT/ATGTGT	3																				3
ACACCT/AGGTGT	1																				1
ACACGC/CGTGTG	1																				1
ACAGAG/CTCTGT	2																				2
ACAGCC/CTGTGG	1																				1
ACAGCT/AGCTGT	1																				1
ACAGGG/CCCTGT	1																				1
ACAGGT/ACCTGT	1																				1
ACAGTG/ACTGTC	1																				1
ACATCT/AGATGT	1																				1
ACATGC/ATGTGC	1	1																			2
ACATGT/ACATGT	3																				3
ACCAGC/CTGGTG	2																				2
ACCAGG/CCTGGT	1	1	1																		3
ACCAGT/ACTGGT	1																				1
ACCCTG/AGGGTC	1																				1
ACCGAG/CGGTCT	1																				1
ACCGAT/ATCGGT	2																				2
ACCGCC/CGGTGG	1																				1
ACCTCC/AGGTGG	4																				4
ACCTGC/AGGTGC	3	1																			4
ACCTGG/AGGTCC	2																				2
ACGAGC/CGTGCT	2																				2
ACGAGG/CCTCGT	2																				2
ACGAGT/ACTCGT	4																				4
ACGTGC/ACGTGC		1																			1
ACTATG/AGTCAT	1	1																			2
ACTCAT/AGTATG	1																				1
ACTCCT/AGGAGT	1																				1
ACTGAT/AGTATC	1																				1
ACTGCC/AGTGGC	1																				1
ACTGGC/AGTGCC	1																				1
ACTGGG/AGTCCC	1																				1
AGAGAT/ATCTCT	1																				1
AGAGGC/CCTCTG	1																				1
AGATAT/ATATCT	3																				3
AGATGC/ATCTGC	1																				1
AGATGG/ATCTCC		1																			1
AGCCTC/AGGCTG	1																				1
AGCGCT/AGCGCT	1																				1
AGCTGC/AGCTGC	1																				1
AGGCGG/CCGCCT	1																				1
ATATCC/ATATGG	1																				1
ATCCCC/ATGGGG	1																				1
ATGCCC/ATGGGC	1																				1
