Specifications
==============

Sequence source file: "/srv/lustre01/project/qmm_mm_pet-j9cm8n271e4/shared/webserver/new-megassr-v5/results/6ae3414606428/fasta/6ae3414606428_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              251488
Total size of examined sequences (bp):           256127795
Total number of identified SSRs:                 35354
Number of SSR containing sequences:              30429
Number of sequences containing more than 1 SSR:  3978
Number of SSRs present in compound formation:    1682


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	446
2	6367
3	4577
4	12432
5	10060
6	1472

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	20	15	13	11	10	4	6	3	4	1	2	3	2	1	1	2	1						2	2						2		1		1	1		1					1	1					1						1		1		1	115
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	7	4	7	5	3	4	4	1	3	3	3	4	2	2	4	2	1		2		2	2		1	1			1	1	1									1						1											1		80
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	14	6	5	4	7	5	6	4	2	4	5	3	3		1		1	1	3	1	1		1			1		1			1		2				1	1										1										94
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	39	17	13	10	11	7	6	8	2	7	3		2	1		1	1	3	1	1	1					4	2	1				1	1		1		1	1				1	1	1		1				1						1	1	4	157
AC	-	-	-	387	184	127	74	50	32	21	13	12	9	7	5	3	6	3	2	3	3	1	3	1		2	1	1	1	1				1		1																																								954
AG	-	-	-	213	124	54	30	21	5	5		2			1																																																													455
AT	-	-	-	381	173	113	72	49	26	21	10	6	2	3	1		1																																																											858
CA	-	-	-	226	116	72	45	33	25	12	13	10	10	5	5	2	1		3	2	3	4	4	3				2				1				4																																								601
CG	-	-	-	12	4				1																																																																			17
CT	-	-	-	144	91	34	25	10	4	3												1																																																						312
GA	-	-	-	99	50	23	11	4	2	5	1		1																																																															196
GC	-	-	-	20		2																																																																						22
GT	-	-	-	251	123	105	50	28	19	13	13	6	10	4	2	4	2	1	1	2	1	5	3	1		2			2	2			1		2	3																																								656
TA	-	-	-	373	167	123	80	37	25	21	10	7	4	1	1	1		1	1																																																									852
TC	-	-	-	195	95	39	26	11	2	1	1	2		1																																																														373
TG	-	-	-	377	211	138	84	65	46	34	23	12	10	5	7	9	6	6	5	5	2		1	10	2	1		1	2			1	1	2	1	4																																								1071
AAC	-	-	26	9	1		1																																																																					37
AAG	-	-	51	8	1													1																																																										61
AAT	-	-	305	82	14	3		1																1																																																				406
ACA	-	-	24	12	4	4																																																																						44
ACC	-	-	9																																																																									9
ACG	-	-	1																																																																									1
ACT	-	-	30	11	3	1	2	1												1																																																								49
AGA	-	-	218	78	32																																																																							328
AGC	-	-	6																																																																									6
AGG	-	-	16	5																																																																								21
AGT	-	-	27	8	1		1	1														1		1																																																				40
ATA	-	-	284	67	23	9	3				1																																																																	387
ATC	-	-	44	10	3	1																																																																						58
ATG	-	-	21	3	2																																																																							26
ATT	-	-	223	62	15	13	4	1			1		1																																																															320
CAA	-	-	18	4	2	1																																																																						25
CAC	-	-	8	3	2			1																																																																				14
CAG	-	-	9	4	3	1		1																																																																				18
CAT	-	-	14	7	2																																																																							23
CCA	-	-	7		2	1																																																																						10
CCG	-	-	25	2	4		1																																																																					32
CCT	-	-	29	10	3	1				1																																																																		44
CGA	-	-		2	1																																																																							3
CGC	-	-	42	11	1	2		1																																																																				57
CGG	-	-	24	11	5		2																																																																					42
CGT	-	-	2	2		1																																																																						5
CTA	-	-	31	6	3	1		1		1				1																																																														44
CTC	-	-	30	9	1																																																																							40
CTG	-	-	8	1	2	1																																																																						12
CTT	-	-	50	20		1																																																																						71
GAA	-	-	33	5	1		1																																																																					40
GAC	-	-	5																																																																									5
GAG	-	-	52	6	2	1																																																																						61
GAT	-	-	16	3	2																																																																							21
GCA	-	-	8	2																																																																								10
GCC	-	-	33	13	1																																																																							47
GCG	-	-	26	10	4																																																																							40
GCT	-	-	9	1	3																																																																							13
GGA	-	-	10	2	2					1																																																																		15
GGC	-	-	37	6	2	3																																																																						48
GGT	-	-	9		1	1																																																																						11
GTA	-	-	25	6	1		1																1																																																					34
GTC	-	-	2	1	1																																																																							4
GTG	-	-	14	7	2																																																																							23
GTT	-	-	8	2																																																																								10
TAA	-	-	248	81	18	8			1		1									1																																																								358
TAC	-	-	26	7	2	1	2		1					1					1																																																									41
TAG	-	-	38	14	2	3	1		1							1																																																												60
TAT	-	-	300	59	9	6	5	2																																																																				381
TCA	-	-	48	13	3	1	1		1																																																																			67
TCC	-	-	22	2	1			1																																																																				26
TCG	-	-	7	2																																																																								9
TCT	-	-	145	57	17	8	1	1																																																																				229
TGA	-	-	52	13	2	2	2																																																																					71
TGC	-	-	13	1	2																																																																							16
TGG	-	-	9	2			1																																																																					12
TGT	-	-	30	6	2	1		1																																																																				40
TTA	-	-	301	96	29	8	5	2	1			1																																																																443
TTC	-	-	106	36	9	1	1		1																																																																			154
TTG	-	-	36	15	3		1																																																																					55
AAAC	-	31	15	4																																																																								50
AAAG	-	33	11	5			1				2				1		1																																																											54
AAAT	-	429	78	22	10	4	3	3			2			1																																																														552
AACA	-	37	15	3	5	1		1	1																																																																			63
AACC	-	2				1		1			1	1																																																																6
AACG	-	4																																																																										4
AACT	-	10	1																																																																									11
AAGA	-	43	7	2						1					1																																																													54
AAGC	-	2	2																																																																									4
AAGG	-	3	1																																																																									4
AAGT	-	21																																																																										21
AATA	-	503	105	43	17	10	2	1	2		1	1																																																																685
AATC	-	11	1	2																																																																								14
AATG	-	29	6	1				1	1	1																																																																		39
AATT	-	55	8																																																																									63
ACAA	-	32	28	25	8	17	3	4	1			3																																																																121
ACAG	-	68	46	8	6	1	2		1	1																																																																		133
ACAT	-	126	36	14	6	1		2	3		1				1	1	1																																																											192
ACCA	-	12															1																																																											13
ACCG	-	1		1																																																																								2
ACCT	-	71	6	4																																																																								81
ACGA	-	1																																																																										1
ACGC	-	1																																																																										1
ACGG	-		1																																																																									1
ACGT	-	3	1																																																																									4
ACTA	-	4	1																																																																									5
ACTC	-					1																																																																						1
ACTG	-	6																																																																										6
ACTT	-	13	1																																																																									14
AGAA	-	55	14	2	1	3		1									1																																																											77
AGAC	-	14	3	2	1																																																																							20
AGAT	-	21	5								1																																																																	27
AGCA	-	3																																																																										3
AGCG	-	1																																																																										1
AGCT	-	4																																																																										4
AGGA	-	3									1																																																																	4
AGGC	-	1																																																																										1
AGGG	-	1																																																																										1
AGGT	-	105	16	2	2	1																																																																						126
AGTA	-	20	2	1																																																																								23
AGTC	-	11	1			1																																																																						13
AGTG	-	6	2	1	1																																																																							10
AGTT	-	5																																																																										5
ATAA	-	389	48	23	5	7	3	3				2		1																																																														481
ATAC	-	126	31	10	11	2		1			1		2	1			1																																																											186
ATAG	-	30	9	3	1			1			1				1																																																													46
ATCA	-	12	4																																																																									16
ATCC	-	26	3																																																																									29
ATCG	-	3																																																																										3
ATCT	-	21	4																																																																									25
ATGA	-	17	6	3					1	1																																																																		28
ATGC	-	7	1																																																																									8
ATGG	-	14	2																																																																									16
ATGT	-	73	19	3	3	2	3	1			1				1		1																																																											107
ATTA	-	47	3	3																																																																								53
ATTC	-	30	8	5	3	1	1			2	1	1																																																																52
ATTG	-	18	9	1	1	1																																																																						30
ATTT	-	348	76	21	7	2	1										2																																																											457
CAAA	-	26	4	3	3	3			3																																																																			42
CAAC	-	5																																																																										5
CAAG	-	7																																																																										7
CAAT	-	11	1																																																																									12
CACG	-	4				1																																																																						5
CACT	-	1	2																																																																									3
CAGA	-	11	4				1																																																																					16
CAGC	-	1																																																																										1
CAGG	-	1																																																																										1
CAGT	-	3																																																																										3
CATA	-	56	22	10	3					1																																																																		92
CATC	-	28	12	2																																																																								42
CATG	-	6	1																																																																									7
CATT	-	9	4										1																																																															14
CCAA	-	4											1																																																															5
CCAT	-	12																																																																										12
CCCT	-	1																																																																										1
CCGA	-	2	1	1																																																																								4
CCGC	-	5																																																																										5
CCGG	-	1																																																																										1
CCTA	-	54	6																																																																									60
CCTC	-	1																																																																										1
CCTG	-	3	1																																																																									4
CCTT	-	7	2																																																																									9
CGAG	-	2																																																																										2
CGCC	-	3																																																																										3
CGCT	-	1																																																																										1
CGGC	-	1																																																																										1
CGTA	-	3																																																																										3
CGTC	-	4																																																																										4
CGTG	-		1																																																																									1
CTAA	-	1																																																																										1
CTAC	-	100	16	3	1	1																																																																						121
CTAG	-	8																																																																										8
CTAT	-	11													1			1																																																										13
CTCA	-	2	2																																																																									4
CTCC	-	2	1																																																																									3
CTCG	-			1																																																																								1
CTGA	-	3	1																																																																									4
CTGC	-	1																																																																										1
CTGG	-	2																																																																										2
CTGT	-	12	3	1	2																																																																							18
CTTA	-	6																																																																										6
CTTC	-	21	2	2	1																																																																							26
CTTG	-	3																																																																										3
CTTT	-	20	11	1	1		4		1			1					1																																																											40
GAAA	-	39	14	3	4	1	2																																																																					63
GAAC	-		1					2																																																																				3
GAAG	-	27	1																																																																									28
GAAT	-	15	2		2	3	1	2																																																																				25
GACA	-	12	3																																																																									15
GACC	-	1	1																																																																									2
GACG	-				1																																																																							1
GACT	-	1																																																																										1
GAGG	-	3																																																																										3
GAGT	-	4	1																																																																									5
GATA	-	22	2	1		1																																																																						26
GATC	-	2																																																																										2
GATG	-	88	17	1	1																																																																							107
GATT	-	4																																																																										4
GCAA	-		1																																																																									1
GCAG	-	2	1																																																																									3
GCCA	-	1	1	1																																																																								3
GCCT	-	1																																																																										1
GCGG	-	5																																																																										5
GCGT	-	1	2																																																																									3
GCTA	-	2																																																																										2
GCTC	-	1																																																																										1
GCTG	-	2																																																																										2
GCTT	-	2																																																																										2
GGAA	-	5																																																																										5
GGAG	-	1																																																																										1
GGAT	-	3	2																																																																									5
GGCA	-	2																																																																										2
GGCT	-	1																																																																										1
GGGA	-	1																																																																										1
GGTA	-	125	16	1														1																																																										143
GGTC	-	2	1	1																																																																								4
GGTT	-	3					1			1																																																																		5
GTAA	-	12	2			1																																																																						15
GTAC	-	9		1																																																																								10
GTAG	-	211	34	10	2	1																																																																						258
GTAT	-	60	13	4													1																																																											78
GTCA	-	37	1																																																																									38
GTCC	-	2	1																																																																									3
GTCG	-	2	5																																																																									7
GTCT	-	16	12	1	1	1	1	1																																																																				33
GTGA	-	6	1	1	2																																																																							10
GTGC	-	3	2																																																																									5
GTTA	-	3																																																																										3
GTTC	-	1	1																																																																									2
GTTG	-	4	1													1																																																												6
GTTT	-	29	13	3	1	1	1						1																																																															49
TAAA	-	590	157	44	13	3	3	1	2	2	1	1						1																																																										818
TAAC	-	12	5																																																																									17
TAAG	-	13																																																																										13
TAAT	-	40	6		1																																																																							47
TACA	-	514	79	15	8	2		1	1	2			1																																																															623
TACC	-	451	48	13		1																																																																						513
TACG	-	12																																																																										12
TACT	-	28	5																																																																									33
TAGA	-	27	15	3	4				1																																																																			50
TAGC	-	3																																																																										3
TAGG	-	253	31	6	3																																																																							293
TAGT	-	12	1							1																																																																		14
TATC	-	50	14	6	3	3	1	1																																																																				78
TATG	-	213	55	16	3	4	1	2	2		4		2			1	2																																																											305
TATT	-	581	134	35	8	4	5		3	1		1			1		1																																																											774
TCAA	-	12	4	1		1																																																																						18
TCAC	-	9																																																																										9
TCAG	-	5	1																																																																									6
TCAT	-	19	5	2	1		1	1	1																																																																			30
TCCA	-	29	5	2	1																																																																							37
TCCT	-	14		1																																																																								15
TCGA	-	1																																																																										1
TCGG	-	1																																																																										1
TCGT	-	2																																																																										2
TCTA	-	27	9	2		1																																																																						39
TCTG	-	58	35	9	6	2					1																																																																	111
TCTT	-	23	4	2			5	2					1				2																																																											39
TGAA	-	33	3	2		1					1																																																																	40
TGAC	-	40	3																																																																									43
TGAG	-	3	1	1		1																																																																						6
TGAT	-	11		1		1																																																																						13
TGCA	-	5																																																																										5
TGCC	-	1																																																																										1
TGCG	-	3	1			1																																																																						5
TGCT	-	2																																																																										2
TGGA	-	7	1				1																																																																					9
TGGC	-	1																																																																										1
TGGT	-	11														1																																																												12
TGTA	-	528	101	37	17	5	2	2	1			1	2	3	1	3	1		1																																																									705
TGTC	-	35	9	5	2	2	2			1								1																																																										57
TGTT	-	25	2		1																																																																							28
TTAA	-	18	4																																																																									22
TTAC	-	22	1	1																																																																								24
TTAG	-	3	1																																																																									4
TTAT	-	449	69	23	11	6	2	1		1	1						1																																																											564
TTCA	-	28	2	1																																																																								31
TTCC	-	9	1		1																																																																							11
TTCG	-	3	1																																																																									4
TTCT	-	62	21	13	3	2	1	1		1				1	1		1			1																																																								108
TTGA	-	9	2		1																																																																							12
TTGC	-	2																																																																										2
TTGG	-	6				1					1															1																																																		9
TTGT	-	8	6	3	1	1																																																																						19
TTTA	-	615	129	29	19	3		1	1	3	3																																																																	803
TTTC	-	74	31	14	6	5	2	2	1	1				1			2																																																											139
TTTG	-	56	33	29	19	12	12	7	18	5																																																																		191
AAAAC	25																																																																											25
AAAAG	15	2												1																																																														18
AAAAT	186	16	1																																																																									203
AAACA	12	1																																																																										13
AAACC	5																																																																											5
AAACG	2	1																																																																										3
AAACT	9																																																																											9
AAAGA	11																																																																											11
AAAGC	2	1																																																																										3
AAAGG	3																																																																											3
AAAGT	8																																																																											8
AAATA	214	8	3	2																																																																								227
AAATC	30	2	1																																																																									33
AAATG	24	2																																																																										26
AAATT	107	2																																																																										109
AACAA	11	1																																																																										12
AACAC	6	1																																																																										7
AACAG	3	1																																																																										4
AACAT	11																																																																											11
AACCA	8																																																																											8
AACCC	2																																																																											2
AACCG	1																																																																											1
AACCT	24	1	2	1		1	1	1	3			1	2																																																															37
AACGA	2	1																																																																										3
AACGC	2																																																																											2
AACGG	1																																																																											1
AACGT	10																																																																											10
AACTA	11	1																																																																										12
AACTC	5																																																																											5
AACTG	8																																																																											8
AACTT	6			1																																																																								7
AAGAA	13	1											1																																																															15
AAGAC	6																																																																											6
AAGAG	3	1																																																																										4
AAGAT	10																																																																											10
AAGCA	5																																																																											5
AAGCG	2																																																																											2
AAGCT	6																																																																											6
AAGGA	1																																																																											1
AAGGG	3																																																																											3
AAGGT	20																																																																											20
AAGTA	11	1																																																																										12
AAGTC	3																																																																											3
AAGTG	5																																																																											5
AAGTT	5	1																																																																										6
AATAA	174	12				1			1																																																																			188
AATAC	27	5											1																																																															33
AATAG	25	3	2								1		1																																																															32
AATAT	44	1																																																																										45
AATCA	33	5	3		1																																																																							42
AATCC	8																																																																											8
AATCG	8																																																																											8
AATCT	12																																																																											12
AATGA	22	2	1					1																																																																				26
AATGC	10	1																																																																										11
AATGG	10																																																																											10
AATGT	31	2																																																																										33
AATTA	66	1																																																																										67
AATTC	72	9	3																																																																									84
AATTG	97	17	1			1								1																																																														117
AATTT	91	3	1																																																																									95
ACAAA	16																																																																											16
ACAAC	14	1																																																																										15
ACAAG	2																																																																											2
ACAAT	17	3	1																																																																									21
ACACA	15																																																																											15
ACACC	6	1																																																																										7
ACACG		1																																																																										1
ACACT	13	1																																																																										14
ACAGA	3	2	1																																																																									6
ACAGC	2																																																																											2
ACAGG	2										1																																																																	3
ACAGT	9																																																																											9
ACATA	11	1																																																																										12
ACATC	2																																																																											2
ACATG	9																																																																											9
ACATT	17	2																																																																										19
ACCAA	6																																																																											6
ACCAC	3																																																																											3
ACCAG	3																																																																											3
ACCAT	10																																																																											10
ACCCA	2																																																																											2
ACCCC	2																																																																											2
ACCCG	1																																																																											1
ACCCT	4	1																																																																										5
ACCGA	2																																																																											2
ACCGC	1																																																																											1
ACCGG	2																																																																											2
ACCGT	3																																																																											3
ACCTA	36	7		1				2				1	2																																																															49
ACCTT	16																																																																											16
ACGAA	4																																																																											4
ACGAC	3																																																																											3
ACGAG	2																																																																											2
ACGAT	7																																																																											7
ACGCC	2		2																																																																									4
ACGCT	1																																																																											1
ACGGA	1																																																																											1
ACGGC	1																																																																											1
ACGGT	2																																																																											2
ACGTA	8																																																																											8
ACGTC	9																																																																											9
ACGTG	4																																																																											4
ACGTT	8																																																																											8
ACTAA	10																																																																											10
ACTAC	11	2																																																																										13
ACTAG	6	1																																																																										7
ACTAT	11	1																																																																										12
ACTCA	3																																																																											3
ACTCC	1																																																																											1
ACTCG	2																																																																											2
ACTCT	2																																																																											2
ACTGA	11	1																																																																										12
ACTGC	1																																																																											1
ACTGG	3																																																																											3
ACTGT	11	1																																																																										12
ACTTA	6																																																																											6
ACTTC	5																																																																											5
ACTTG	4																																																																											4
ACTTT	7																																																																											7
AGAAA	14	1																																																																										15
AGAAC	5				2																																																																							7
AGAAG	9						1																																																																					10
AGAAT	9	2	2																																																																									13
AGACA	3																																																																											3
AGACC	2																																																																											2
AGACT	6																																																																											6
AGAGA	6																																																																											6
AGAGG	2	1		1																																																																								4
AGAGT	2										1																																																																	3
AGATA	6																																																																											6
AGATC	2		1																																																																									3
AGATG	2																																																																											2
AGATT	9									1																																																																		10
AGCAA	3																																																																											3
AGCAC	2																																																																											2
AGCAT	11			1																																																																								12
AGCCA	2																																																																											2
AGCCT	4	1																																																																										5
AGCGA	2																																																																											2
AGCGG	2																																																																											2
AGCGT	2																																																																											2
AGCTA	4																																																																											4
AGCTC	3																																																																											3
AGCTG	4																																																																											4
AGCTT	12																																																																											12
AGGAA	1																																																																											1
AGGAC	3																																																																											3
AGGAG	3	1	1																																																																									5
AGGAT	1																																																																											1
AGGCT	3																																																																											3
AGGGA	1																																																																											1
AGGGG	2																																																																											2
AGGGT	1																																																																											1
AGGTA	19																																																																											19
AGGTC	2																																																																											2
AGGTG	3																																																																											3
AGGTT	28	4				1																																																																						33
AGTAA	8																																																																											8
AGTAC	3	2																																																																										5
AGTAG	6																																																																											6
AGTAT	9		1			1																																																																						11
AGTCA	3																																																																											3
AGTCG	2																																																																											2
AGTCT	11	2																																																																										13
AGTGA	5	1																																																																										6
AGTGC	5																																																																											5
AGTGG	3																																																																											3
AGTGT	5	2			1																																																																							8
AGTTA	3																																																																											3
AGTTC	3	1																																																																										4
AGTTG	5																																																																											5
AGTTT	10																																																																											10
ATAAA	126	8																																																																										134
ATAAC	6																																																																											6
ATAAG	13	1																																																																										14
ATAAT	48	1	1																																																																									50
ATACA	29	1	2																																																																									32
ATACC	8								1																																																																			9
ATACG	11																																																																											11
ATACT	16						1																																																																					17
ATAGA	24	2	2	1		1	1																																																																					31
ATAGC	4	1																																																																										5
ATAGG	13	1																																																																										14
ATAGT	7	1											1																																																															9
ATATA	49	1																																																																										50
ATATC	7																																																																											7
ATATG	11	1	1																																																																									13
ATATT	41	2		1						1																																																																		45
ATCAA	26	6	2	1																																																																								35
ATCAC	4					1																																																																						5
ATCAG	5																																																																											5
ATCAT	6																																																																											6
ATCCA	4																																																																											4
ATCCC	4																																																																											4
ATCCG	3																																																																											3
ATCCT	16																																																																											16
ATCGA	4	1																																																																										5
ATCGC	4																																																																											4
ATCGG	1																																																																											1
ATCGT	4																																																																											4
ATCTA	12																																																																											12
ATCTC	5																																																																											5
ATCTG	1	1																																																																										2
ATCTT	10																																																																											10
ATGAA	22																																																																											22
ATGAC	15																																																																											15
ATGAG	5																																																																											5
ATGAT	8											1																																																																9
ATGCA	7																																																																											7
ATGCC	4	1																																																																										5
ATGCG	5																																																																											5
ATGCT	9																																																																											9
ATGGA	7																																																																											7
ATGGC	1																																																																											1
ATGGG	2		1																																																																									3
ATGGT	9																																																																											9
ATGTA	36	2	1																																																																									39
ATGTC	16	2																																																																										18
ATGTG	10	3																																																																										13
ATGTT	9	1																																																																										10
ATTAA	59	2																																																																										61
ATTAC	27																																																																											27
ATTAG	10	1																																																																										11
ATTAT	40																																																																											40
ATTCA	84	15	4				1																																																																					104
ATTCC	9	1					1																																																																					11
ATTCG	11		1																																																																									12
ATTCT	16	5	1																																																																									22
ATTGA	119	46	7		1					1																																																																		174
ATTGC	8																																																																											8
ATTGG	4	1																																																																										5
ATTGT	18	3																																																																										21
ATTTA	71	6		1																																																																								78
ATTTC	36	4	1	1																																																																								42
ATTTG	32	5																																																																										37
ATTTT	180	3	1																																																																									184
CAAAA	14	1																																																																										15
CAAAC	3																																																																											3
CAAAG	3																																																																											3
CAAAT	19	2	1																																																																									22
CAACA	5																																																																											5
CAACG	6																																																																											6
CAACT	1																																																																											1
CAAGA	1																																																																											1
CAAGG	3																																																																											3
CAAGT	4																																																																											4
CAATA	11	1																																																																										12
CAATC	3	1																																																																										4
CAATG	5																																																																											5
CAATT	40	8		1						1																																																																		50
CACAA	15	1																																																																										16
CACAC	9																																																																											9
CACAG	4																																																																											4
CACAT	5																																																																											5
CACCA	9																																																																											9
CACCG	5																																																																											5
CACCT	2																																																																											2
CACGA	6	1																																																																										7
CACGC	1																																																																											1
CACGG	3																																																																											3
CACGT	5																																																																											5
CACTA	6																																																																											6
CACTC	2																																																																											2
CACTG	5																																																																											5
CACTT	1																																																																											1
CAGAA	5			1																																																																								6
CAGAC	2																																																																											2
CAGAG	2																																																																											2
CAGCC	1																																																																											1
CAGGT	1																																																																											1
CAGTA	4	1	1																																																																									6
CAGTC	4																																																																											4
CAGTG	3																																																																											3
CAGTT	6																																																																											6
CATAA	6																																																																											6
CATAC	4	2																																																																										6
CATAG	3																																																																											3
CATAT	2		1				1																																																																					4
CATCA	3																																																																											3
CATCC	2																																																																											2
CATCT	4																																																																											4
CATGA	10																																																																											10
CATGC	2																																																																											2
CATGG	7																																																																											7
CATGT	5																																																																											5
CATTA	14	1	1																																																																									16
CATTC	9	1	1																																																																									11
CATTG	7	2																																																																										9
CATTT	8																																																																											8
CCAAA	5																																																																											5
CCAAT	2																																																																											2
CCACA	3																																																																											3
CCACG	4																																																																											4
CCACT	2																																																																											2
CCAGA	2																																																																											2
CCAGC	2																																																																											2
CCAGG	4																																																																											4
CCAGT	1																																																																											1
CCATA	5																																																																											5
CCATC	2																																																																											2
CCATG	2																																																																											2
CCATT	3																																																																											3
CCCAC	1																																																																											1
CCCAG	3																																																																											3
CCCAT	3																																																																											3
CCCCG	4																																																																											4
CCCCT	1																																																																											1
CCCGC	1	1																																																																										2
CCCTA	7																																																																											7
CCCTC	1																																																																											1
CCCTG	1																																																																											1
CCGAA	5																																																																											5
CCGCA	2	1																																																																										3
CCGCG	2																																																																											2
CCGCT	1																																																																											1
CCGGA	1																																																																											1
CCGTA	2																																																																											2
CCGTC												1																																																																1
CCTAA	17	2	2	3	1	1						3	2																																																															31
CCTAC	6																																																																											6
CCTAG	3	1																																																																										4
CCTAT	3																																																																											3
CCTCC	2																																																																											2
CCTCG		1																																																																										1
CCTCT	2																																																																											2
CCTGA	2																																																																											2
CCTGC	1																																																																											1
CCTGG	2																																																																											2
CCTGT	1																																																																											1
CCTTA	9							1																																																																				10
CCTTC	1																																																																											1
CCTTG	3																																																																											3
CCTTT	3																																																																											3
CGAAA	1																																																																											1
CGAAC	2																																																																											2
CGAAG	2																																																																											2
CGAAT	4	2																																																																										6
CGACA	3																																																																											3
CGACG	6																																																																											6
CGAGA	1																																																																											1
CGAGC	1																																																																											1
CGAGG	1	1																																																																										2
CGATA	3	1																																																																										4
CGATC	1																																																																											1
CGATG	1																																																																											1
CGATT	4																																																																											4
CGCAA	2																																																																											2
CGCAC	4																																																																											4
CGCAG	2																																																																											2
CGCCA		1																																																																										1
CGCCG	10	1																																																																										11
CGCCT	3																																																																											3
CGCGA	1																																																																											1
CGCGC	2																																																																											2
CGCGG	1	1																																																																										2
CGCGT	4																																																																											4
CGCTA	3																																																																											3
CGCTG	2																																																																											2
CGCTT	2																																																																											2
CGGAA	2																																																																											2
CGGAG	2																																																																											2
CGGAT	2																																																																											2
CGGCA	1																																																																											1
CGGCG	16																																																																											16
CGGCT	1																																																																											1
CGGGA	1																																																																											1
CGGGG	1																																																																											1
CGGGT	1																																																																											1
CGGTA	1		1																																																																									2
CGGTC	1																																																																											1
CGGTG	3																																																																											3
CGGTT	1																																																																											1
CGTAA	7																																																																											7
CGTAC	2			1																																																																								3
CGTAG	4																																																																											4
CGTAT	7																																																																											7
CGTCA	10	1																																																																										11
CGTCG	8	1																																																																										9
CGTCT	1																																																																											1
CGTGA	5																																																																											5
CGTGC	2																																																																											2
CGTGG	2	1																																																																										3
CGTTA	1																																																																											1
CGTTC	2																																																																											2
CGTTG	1																																																																											1
CGTTT	4																																																																											4
CTAAA	12																																																																											12
CTAAC	62	10	3	1							1		4																																																															81
CTAAG	5	1																																																																										6
CTAAT	3	1																																																																										4
CTACA	4																																																																											4
CTACC	3																																																																											3
CTACG	7																																																																											7
CTACT	4																																																																											4
CTAGA	9																																																																											9
CTAGC	4																																																																											4
CTAGG	3	1																																																																										4
CTAGT	13																																																																											13
CTATA	9	1								1																																																																		11
CTATC	4																																																																											4
CTATG	4																																																																											4
CTATT	7	1									1		1																																																															10
CTCAA	6																																																																											6
CTCAC	4																																																																											4
CTCAG	4																																																																											4
CTCCT	9																																																																											9
CTCGA	2																																																																											2
CTCGC	1																																																																											1
CTCGG	1																																																																											1
CTCGT	3																																																																											3
CTCTA	6																																																																											6
CTCTC	8	1																																																																										9
CTCTG	1																																																																											1
CTCTT	4																																																																											4
CTGAA	6																																																																											6
CTGAG	2																																																																											2
CTGAT	2																																																																											2
CTGCA	3																																																																											3
CTGCG	1																																																																											1
CTGCT	1																																																																											1
CTGGA	2																																																																											2
CTGGG	1																																																																											1
CTGGT	1																																																																											1
CTGTA	8	1																																																																										9
CTGTC	1																																																																											1
CTGTG	4		1																																																																									5
CTGTT	4		1																																																																									5
CTTAA	4																																																																											4
CTTAC	15																																																																											15
CTTAG	3																																																																											3
CTTAT	3																																																																											3
CTTCA	1																																																																											1
CTTCG	2																																																																											2
CTTCT	4																																																																											4
CTTGA	5																																																																											5
CTTGC	1																																																																											1
CTTGG	4																																																																											4
CTTGT	2																																																																											2
CTTTA	10	1																																																																										11
CTTTG	1																																																																											1
CTTTT	12	1																																																																										13
GAAAA	14	1																																																																										15
GAAAC	1																																																																											1
GAAAG	4																																																																											4
GAAAT	15	3																																																																										18
GAACA	2																																																																											2
GAACC	3																																																																											3
GAACT	4																																																																											4
GAAGA	3			1																																																																								4
GAAGG	3																																																																											3
GAAGT	3																																																																											3
GAATA	19	1																																																																										20
GAATC	2	1																																																																										3
GAATG	3																																																																											3
GAATT	30	2	1																																																																									33
GACAA	6																																																																											6
GACAC	4																																																																											4
GACAT	4	1																																																																										5
GACCA	1																																																																											1
GACCT	1																																																																											1
GACGA	2																																																																											2
GACGC	6																																																																											6
GACGT	1																																																																											1
GACTA	4																																																																											4
GACTC	1																																																																											1
GACTT	1	1																																																																										2
GAGAA	3																																																																											3
GAGAC	3																																																																											3
GAGAG	4																																																																											4
GAGAT	3		1																																																																									4
GAGCA	1																																																																											1
GAGCC	2																																																																											2
GAGCG	1																																																																											1
GAGCT	1																																																																											1
GAGGA	4	1																																																																										5
GAGGC	2																																																																											2
GAGGG	3																																																																											3
GAGTA	1													1																																																														2
GAGTC	2																																																																											2
GAGTG	1																																																																											1
GAGTT	1																																																																											1
GATAA	4																																																																											4
GATAC	3																																																																											3
GATAG	6																																																																											6
GATAT	6																																																																											6
GATCA	2																																																																											2
GATCT	1																																																																											1
GATGA	6																																																																											6
GATGC	3																																																																											3
GATGG	3																																																																											3
GATGT	1																																																																											1
GATTA	5																																																																											5
GATTC	5																																																																											5
GATTG	5																																																																											5
GATTT	6	2																																																																										8
GCAAA	4																																																																											4
GCAAC	4																																																																											4
GCAAG	1																																																																											1
GCAAT	4																																																																											4
GCACA	4																																																																											4
GCACC	1																																																																											1
GCACT	1																																																																											1
GCAGC	1																																																																											1
GCATA	6																																																																											6
GCATC	3																																																																											3
GCATG	5																																																																											5
GCATT	3																																																																											3
GCCAC	2																																																																											2
GCCCA	1																																																																											1
GCCCT	1																																																																											1
GCCGC	2																																																																											2
GCCGG	1																																																																											1
GCCTA	1																																																																											1
GCCTC	1																																																																											1
GCCTT	4																																																																											4
GCGAA	2																																																																											2
GCGAC	7																																																																											7
GCGAG	2			1																																																																								3
GCGAT	2																																																																											2
GCGCC	6	1																																																																										7
GCGCG	5																																																																											5
GCGCT	3																																																																											3
GCGGA	1																																																																											1
GCGGC	13	1	1																																																																									15
GCGGT	4																																																																											4
GCGTA	2																																																																											2
GCGTC	6																																																																											6
GCGTG	1																																																																											1
GCGTT	3																																																																											3
GCTAA	5																																																																											5
GCTAC	3																																																																											3
GCTAG	3	1																																																																										4
GCTAT	3																																																																											3
GCTCA	1																																																																											1
GCTCC	1																																																																											1
GCTCG	2																																																																											2
GCTCT	1																																																																											1
GCTGC	2																																																																											2
GCTTA	4																																																																											4
GCTTC	1																																																																											1
GCTTG	3																																																																											3
GCTTT	3																																																																											3
GGAAA	2																																																																											2
GGAAC	2																																																																											2
GGAAG	1																																																																											1
GGAAT	1	1																																																																										2
GGACA	1																																																																											1
GGACC	1																																																																											1
GGACG		1																																																																										1
GGAGA	5																																																																											5
GGAGG	1																																																																											1
GGAGT	1																																																																											1
GGATA	2		1																																																																									3
GGCAA	2																																																																											2
GGCAC	1																																																																											1
GGCAG	2																																																																											2
GGCAT	1	1																																																																										2
GGCGC	5																																																																											5
GGCGG	1																																																																											1
GGCGT	1																																																																											1
GGCTA	1																																																																											1
GGGAA	1																																																																											1
GGGAC	1																																																																											1
GGGAT	2																																																																											2
GGGCT	1																																																																											1
GGGGA	1																																																																											1
GGGGC	2																																																																											2
GGGTA	3	1																																																																										4
GGTAA	6																																																																											6
GGTAC	5																																																																											5
GGTAG	3	1																																																																										4
GGTAT	6																																																																											6
GGTCA	4																																																																											4
GGTGA	4																																																																											4
GGTGC	3																																																																											3
GGTGG	2																																																																											2
GGTGT	2																																																																											2
GGTTA	32	8	4	1	1	1	1	1		2	1	1	3																																																															56
GGTTG		1																																																																										1
GGTTT	5																																																																											5
GTAAA	6	1																																																																										7
GTAAC	1																																																																											1
GTAAG	11		1																																																																									12
GTAAT	9	1																																																																										10
GTACA	10																																																																											10
GTACC	5	1																																																																										6
GTACG	2		1																																																																									3
GTACT	3																																																																											3
GTAGA	3		1			1																																																																						5
GTAGC	1																																																																											1
GTAGG	4																																																																											4
GTAGT	5		1				1																																																																					7
GTATA	17		1					1																																																																				19
GTATC	3																																																																											3
GTATG	2																																																																											2
GTATT	18																																																																											18
GTCAA	4																																																																											4
GTCAC	5		1																																																																									6
GTCAG	1																																																																											1
GTCAT	5																																																																											5
GTCCA	6																																																																											6
GTCCC	1																																																																											1
GTCCG	1																																																																											1
GTCCT	3																																																																											3
GTCGA	3																																																																											3
GTCGC	1																																																																											1
GTCGT	2																																																																											2
GTCTA	9	1																																																																										10
GTCTC	5																																																																											5
GTCTG	1																																																																											1
GTCTT	3																																																																											3
GTGAA	5	1																																																																										6
GTGAC	11	1																																																																										12
GTGAG	5																																																																											5
GTGAT	3			1																																																																								4
GTGCA	4																																																																											4
GTGCG	1	2																																																																										3
GTGCT	6																																																																											6
GTGGA	3																																																																											3
GTGGC	2																																																																											2
GTGGT	3																																																																											3
GTGTA	15	3	1	1																																																																								20
GTGTC	5																																																																											5
GTGTG	13	2																																																																										15
GTGTT	9																																																																											9
GTTAA	1																																																																											1
GTTAC	9	1																																																																										10
GTTAG	54	9	2	1	1	1			1				1																																																															70
GTTAT	6																																																																											6
GTTCA	7																																																																											7
GTTCC	1																																																																											1
GTTCG	1																																																																											1
GTTCT	6																																																																											6
GTTGA	3																																																																											3
GTTGC	2																																																																											2
GTTGT	8																																																																											8
GTTTA	6																																																																											6
GTTTC	1																																																																											1
GTTTG	1																																																																											1
GTTTT	14																																																																											14
TAAAA	215	6				1				1			1	1																																																														225
TAAAC	14																																																																											14
TAAAG	7																																																																											7
TAAAT	59	1																																																																										60
TAACA	9											1																																																																10
TAACC	35	13	3	2									1																																																															54
TAACG	8																																																																											8
TAACT	2	1																																																																										3
TAAGA	7	2																																																																										9
TAAGC	3																																																																											3
TAAGG	24	3																																																																										27
TAAGT	2	1																																																																										3
TAATA	30																																																																											30
TAATC	6																																																																											6
TAATG	16	1	1																																																																									18
TAATT	51	1																																																																										52
TACAA	38	1																																																																										39
TACAC	8	2																																																																										10
TACAG	10																																																																											10
TACAT	31																																																																											31
TACCA	8	1																																																																										9
TACCC	5	1																																																																										6
TACCG	1																																																																											1
TACCT	25		1																																																																									26
TACGA	6	1																																																																										7
TACGC	3																																																																											3
TACGG	7	1																																																																										8
TACGT	3	1																																																																										4
TACTA	20	1							2				3																																																															26
TACTC	6																																																																											6
TACTG	13	2																																																																										15
TACTT	9	1																																																																										10
TAGAA	36	12	3	2																																																																								53
TAGAC	13	1																																																																										14
TAGAG	5				1																																																																							6
TAGAT	7																																																																											7
TAGCA	2			1																																																																								3
TAGCC	2																																																																											2
TAGCG	2																																																																											2
TAGCT	4																																																																											4
TAGGA	10																																																																											10
TAGGG	5																																																																											5
TAGGT	52	6	4	1				1		2	1		3																																																															70
TAGTA	13	2								1																																																																		16
TAGTC	3																																																																											3
TAGTG	8	1	1																																																																									10
TAGTT	5			1																																																																								6
TATAA	33																																																																											33
TATAC	7	3	1						1																																																																			12
TATAG	22	1		1	1																																																																							25
TATAT	51	1																																																																										52
TATCA	7																																																																											7
TATCC	4																																																																											4
TATCG	8																																																																											8
TATCT	5																																																																											5
TATGA	7																																																																											7
TATGC	1																																																																											1
TATGG	16	2		1																																																																								19
TATGT	20	1																																																																										21
TATTA	46																																																																											46
TATTC	23	3												1																																																														27
TATTG	26	3	1		1	1			1				1	1																																																														35
TATTT	158	9											1																																																															168
TCAAA	32	11	3	1																																																																								47
TCAAC	1																																																																											1
TCAAG	5																																																																											5
TCAAT	28	8	4	1																																																																								41
TCACA	7		1																																																																									8
TCACG	6																																																																											6
TCACT	5																																																																											5
TCAGA	1	1																																																																										2
TCAGC	1																																																																											1
TCAGG	4																																																																											4
TCAGT	6	1																																																																										7
TCATA	7																																																																											7
TCATC	4	1																																																																										5
TCATG	4		1																																																																									5
TCATT	21	2	1																																																																									24
TCCAA	4																																																																											4
TCCAC	3																																																																											3
TCCAG	2																																																																											2
TCCAT	2																																																																											2
TCCCA	1																																																																											1
TCCCC	1																																																																											1
TCCGG	2																																																																											2
TCCGT	2																																																																											2
TCCTA	7																																																																											7
TCCTC	9	1	1																																																																									11
TCCTG	2																																																																											2
TCGAA	7																																																																											7
TCGAC	1																																																																											1
TCGAG	2																																																																											2
TCGAT	4																																																																											4
TCGCA	5	1																																																																										6
TCGCC	1																																																																											1
TCGCT	2																																																																											2
TCGGC	1																																																																											1
TCGGG		1																																																																										1
TCGTA	10	1																																																																										11
TCGTC	2																																																																											2
TCGTG	9																																																																											9
TCGTT	1																																																																											1
TCTAA	12																																																																											12
TCTAC	5																																																																											5
TCTAG	10																																																																											10
TCTAT	12					1							1																																																															14
TCTCA	3																																																																											3
TCTCC	6	3																																																																										9
TCTCG	2																																																																											2
TCTCT	7																																																																											7
TCTGA	4																																																																											4
TCTGC	1																																																																											1
TCTGG	1																																																																											1
TCTGT	6																																																																											6
TCTTA	5																																																																											5
TCTTC	9	1																																																																										10
TCTTG	5																																																																											5
TCTTT	9																																																																											9
TGAAA	42	6																																																																										48
TGAAC	6																																																																											6
TGAAG	4																																																																											4
TGAAT	43	14																																																																										57
TGACA	24	2																																																																										26
TGACC	2																																																																											2
TGACG	8																																																																											8
TGACT	1																																																																											1
TGAGA	8																																																																											8
TGAGC	1																																																																											1
TGAGG	2																																																																											2
TGAGT	8																																																																											8
TGATA	6																																																																											6
TGATC	5																																																																											5
TGATG	4	1																																																																										5
TGATT	20	5	2	1																																																																								28
TGCAA	9																																																																											9
TGCAC	5																																																																											5
TGCAG	1																																																																											1
TGCAT	1																																																																											1
TGCCA	5																																																																											5
TGCCG	2																																																																											2
TGCCT	2																																																																											2
TGCGA	7	1																																																																										8
TGCGT	1																																																																											1
TGCTA	1	1																																																																										2
TGCTC	1																																																																											1
TGCTG	1																																																																											1
TGCTT	3	1																																																																										4
TGGAA	4	1										1																																																																6
TGGAC	3																																																																											3
TGGAG	1																																																																											1
TGGAT	3																																																																											3
TGGCA	5																																																																											5
TGGCC	2																																																																											2
TGGCT	3																																																																											3
TGGGA	5																																																																											5
TGGGC	1																																																																											1
TGGGG	2																																																																											2
TGGGT	2																																																																											2
TGGTA	5	1																																																																										6
TGGTC	5																																																																											5
TGGTG	3																																																																											3
TGGTT	1																																																																											1
TGTAA	32	2																																																																										34
TGTAC	7	2																																																																										9
TGTAG	15	3																																																																										18
TGTAT	32	2					1																																																																					35
TGTCA	25	1																																																																										26
TGTCC	4																																																																											4
TGTCG	7																																																																											7
TGTCT	2	2																																																																										4
TGTGA	8																																																																											8
TGTGC	1																																																																											1
TGTGG	7																																																																											7
TGTGT	15	3																																																																										18
TGTTA	3																																																																											3
TGTTC		2				1																																																																						3
TGTTG	12	1																																																																										13
TGTTT	23																																																																											23
TTAAA	53	4																																																																										57
TTAAC	2	1																																																																										3
TTAAG	12																																																																											12
TTAAT	49																																																																											49
TTACA	38	2																																																																										40
TTACC	20	3											1	1																																																														25
TTACG	7	1																																																																										8
TTACT	6	2																																																																										8
TTAGA	14			1																																																																								15
TTAGC	7																																																																											7
TTAGG	27	4		1		1				1			4																																																															38
TTAGT	7																																																																											7
TTATA	28																																																																											28
TTATC	12	2	1						1																																																																			16
TTATG	12																																																																											12
TTATT	126	5																																																																										131
TTCAA	78	15	2		1																																																																							96
TTCAC	6	2																																																																										8
TTCAG	5																																																																											5
TTCAT	17	1												1																																																														19
TTCCA	10	5			1																																																																							16
TTCCG	4																																																																											4
TTCCT	3																																																																											3
TTCGA	6																																																																											6
TTCGC	2																																																																											2
TTCGG	2																																																																											2
TTCGT	5	1																																																																										6
TTCTA	33	11	3						1																																																																			48
TTCTC	5																																																																											5
TTCTG	1	1																																																																										2
TTCTT	10		1						1																																																																			12
TTGAA	56	8	2																																																																									66
TTGAC	5	1																																																																										6
TTGAG	5																																																																											5
TTGAT	18																																																																											18
TTGCA	10																																																																											10
TTGCC	3																																																																											3
TTGCG	2	1																																																																										3
TTGCT	3																																																																											3
TTGGA	9	1																																																																										10
TTGGC	3																																																																											3
TTGGG	1																																																																											1
TTGGT	3																																																																											3
TTGTA	46	6	4	2			1						1																																																															60
TTGTC	7												1	1																																																														9
TTGTG	12																																																																											12
TTGTT	25																																																																											25
TTTAA	74				1				1																																																																			76
TTTAC	10																																																																											10
TTTAG	21																																																																											21
TTTAT	196	8	3	1					1																																																																			209
TTTCA	47	2																																																																										49
TTTCC	4																																																																											4
TTTCG	5																																																																											5
TTTCT	17	1																																																																										18
TTTGA	56	14	6			1																																																																						77
TTTGC	7																																																																											7
TTTGG	9	1																																																																										10
TTTGT	11																																																																											11
TTTTA	323	11	1																																																																									335
TTTTC	23			1																																																																								24
TTTTG	23																																																																											23
AAAAAC	1																																																																											1
AAAAAT	14																																																																											14
AAAATA	9																																																																											9
AAAATC	3																																																																											3
AAAATG	1																																																																											1
AAAATT	1																																																																											1
AAACCG	4																																																																											4
AAACGT	1																																																																											1
AAAGAG	1																																																																											1
AAAGGT	1																																																																											1
AAATAA	10																																																																											10
AAATAC	1																																																																											1
AAATAT	1																																																																											1
AAATGA	2																																																																											2
AAATTA	3																																																																											3
AAATTC	8																																																																											8
AACAAA	2																																																																											2
AACAAT			1																																																																									1
AACAGG		1																																																																										1
AACATG	1																																																																											1
AACCGA	7																																																																											7
AACCGC	1																																																																											1
AACGTT	1	1																																																																										2
AACTAT	1																																																																											1
AAGAAA	1																																																																											1
AAGACG	1																																																																											1
AAGACT	1																																																																											1
AAGATA	1																																																																											1
AAGGAG	1																																																																											1
AAGGAT	2																																																																											2
AAGGTT	1																																																																											1
AAGTAA	2																																																																											2
AAGTAT	1																																																																											1
AAGTGA	1																																																																											1
AAGTTT	1																																																																											1
AATAAA	7																																																																											7
AATAAG	2			1																																																																								3
AATACG	1																																																																											1
AATACT	1																																																																											1
AATAGA	1																																																																											1
AATATA	1																																																																											1
AATATG	1																																																																											1
AATCAA	1																																																																											1
AATCAG	1																																																																											1
AATCAT	1																																																																											1
AATCTG	1																																																																											1
AATGAA	2																																																																											2
AATGGT	1																																																																											1
AATGTT	2																																																																											2
AATTAA	1																																																																											1
AATTAC	1																																																																											1
AATTAT	2																																																																											2
AATTGA	1																																																																											1
AATTTA	1																																																																											1
AATTTG	9																																																																											9
AATTTT	2			1																																																																								3
ACAAAA	1																																																																											1
ACAAAT	4																																																																											4
ACACAA	1																																																																											1
ACACAT	4																																																																											4
ACACCC	1																																																																											1
ACACCG	1																																																																											1
ACAGGG	1																																																																											1
ACAGTC	1																																																																											1
ACAGTG	1																																																																											1
ACATAA		1																																																																										1
ACATAC	3																																																																											3
ACATTA	1																																																																											1
ACATTC	1																																																																											1
ACATTG	1																																																																											1
ACCAAC	1																																																																											1
ACCACA	5																																																																											5
ACCAGT	1																																																																											1
ACCCAC	1																																																																											1
ACCCAG	1																																																																											1
ACCGAA	15	1																																																																										16
ACCTAA	2																																																																											2
ACCTAC	2																																																																											2
ACCTTG	1																																																																											1
ACCTTT	1																																																																											1
ACGACA	1																																																																											1
ACGCGG	1																																																																											1
ACGGGA	1																																																																											1
ACGTAC	1																																																																											1
ACGTCA	1																																																																											1
ACGTCG	1																																																																											1
ACGTGA	1																																																																											1
ACGTTA	1																																																																											1
ACGTTT	1																																																																											1
ACTACG	1																																																																											1
ACTAGT	1																																																																											1
ACTATG	1																																																																											1
ACTCAA	1																																																																											1
ACTCGT	1																																																																											1
ACTGTT	1																																																																											1
ACTTAC	1																																																																											1
ACTTAT	1																																																																											1
ACTTGT	1																																																																											1
ACTTTG	1																																																																											1
AGAAAA	1																																																																											1
AGAATA	2																																																																											2
AGAGTT	2																																																																											2
AGATAA	1																																																																											1
AGATGA	1																																																																											1
AGATTA	1																																																																											1
AGCAAC	2																																																																											2
AGCAAG	1																																																																											1
AGCACT	1																																																																											1
AGCATA	1																																																																											1
AGCCGA	1																																																																											1
AGCCTT	1																																																																											1
AGCGCC	1																																																																											1
AGCGGA	2																																																																											2
AGCGGG	3																																																																											3
AGCTCT	1																																																																											1
AGGAGC	1																																																																											1
AGGCAC	1																																																																											1
AGGCGG	1																																																																											1
AGGTAA	1																																																																											1
AGGTAT	1																																																																											1
AGGTTC	1																																																																											1
AGTAAA	1																																																																											1
AGTAGC	1																																																																											1
AGTATA	1																																																																											1
AGTATT	1																																																																											1
AGTCAT	1																																																																											1
AGTGAC	1																																																																											1
AGTGCA	1																																																																											1
AGTGGG	1																																																																											1
AGTTAA	1																																																																											1
AGTTAC	1																																																																											1
AGTTAG	1																																																																											1
AGTTGA	1																																																																											1
AGTTGC		1																																																																										1
ATAAAA	7																																																																											7
ATAAAT	2									1																																																																		3
ATAACA	1																																																																											1
ATAACG	1																																																																											1
ATAAGA	2																																																																											2
ATAAGG	1																																																																											1
ATAAGT	1																																																																											1
ATAATC	3																																																																											3
ATACAA	3																																																																											3
ATACAC	1																																																																											1
ATACAT	2																																																																											2
ATACTA	1																																																																											1
ATACTT	1																																																																											1
ATAGAT	2																																																																											2
ATAGCT	1																																																																											1
ATAGGA	1																																																																											1
ATAGGT	1																																																																											1
ATATAC	3																																																																											3
ATATCG	1																																																																											1
ATATGA	1																																																																											1
ATATGT	1																																																																											1
ATATTA		1																																																																										1
ATATTC	3																																																																											3
ATATTT	1																																																																											1
ATCAAA	2																																																																											2
ATCAGC	2																																																																											2
ATCATG	1																																																																											1
ATCATT	2																																																																											2
ATCCAC	1																																																																											1
ATCCCC	1																																																																											1
ATCCTA	1																																																																											1
ATCCTT	10	5		1																																																																								16
ATCGAT	1																																																																											1
ATCGCC		1																																																																										1
ATCGCT	1																																																																											1
ATCGGT		1																																																																										1
ATCTAA	1																																																																											1
ATCTAT	2																																																																											2
ATCTGG	1																																																																											1
ATCTGT	1																																																																											1
ATGAAA	1																																																																											1
ATGAAC	1																																																																											1
ATGAAT	9																																																																											9
ATGATA	1																																																																											1
ATGATT	3																																																																											3
ATGCGC	1																																																																											1
ATGCGG	1																																																																											1
ATGGCG	1																																																																											1
ATGGGC	1																																																																											1
ATGGGT	1																																																																											1
ATGGTT	2																																																																											2
ATGTAT	1																																																																											1
ATGTGT	1																																																																											1
ATTAAA	3																																																																											3
ATTAAC	1																																																																											1
ATTAAT	1																																																																											1
ATTACA	1																																																																											1
ATTATA	3																																																																											3
ATTATC	3	1																																																																										4
ATTCAA	1	2																																																																										3
ATTCAG	1																																																																											1
ATTCAT	2																																																																											2
ATTCCA	1																																																																											1
ATTCGC	1	2																																																																										3
ATTCGT	1																																																																											1
ATTCTC	1																																																																											1
ATTCTT		1																																																																										1
ATTGAC	1																																																																											1
ATTGGT	1																																																																											1
ATTGTC	2																																																																											2
ATTGTT	1																																																																											1
ATTTCA	4																																																																											4
ATTTCT	1																																																																											1
ATTTGA	2																																																																											2
ATTTGG	1																																																																											1
ATTTGT	3	1																																																																										4
ATTTTA	5																																																																											5
ATTTTC	2																																																																											2
ATTTTG	11	1																																																																										12
ATTTTT	10	1																																																																										11
CAAAAT	1																																																																											1
CAAAGA	1																																																																											1
CAAATA	1																																																																											1
CAAATT	2	2																																																																										4
CAACCG	1																																																																											1
CAACGG	1																																																																											1
CAAGAC	3	1																																																																										4
CAAGTA		1																																																																										1
CAATAG	1																																																																											1
CAATAT	1																																																																											1
CAATGA	1																																																																											1
CACACG			1	1																																																																								2
CACATA	1																																																																											1
CACCAA	1																																																																											1
CACCAG	1																																																																											1
CACCCA	1																																																																											1
CACCCG	1																																																																											1
CACCGG	1																																																																											1
CACCTA	1																																																																											1
CACCTG	1																																																																											1
CACCTT	1																																																																											1
CACGAC	1																																																																											1
CACGCA	1																																																																											1
CACGTA	1																																																																											1
CAGAAC	1																																																																											1
CAGGAG		1																																																																										1
CAGGCG	1																																																																											1
CAGTCG	1																																																																											1
CAGTTG		1																																																																										1
CATAAT	1																																																																											1
CATAGA	1																																																																											1
CATATA	1																																																																											1
CATCGT	1																																																																											1
CATCTC	1																																																																											1
CATTAA	1																																																																											1
CATTAT	1																																																																											1
CATTCA	1																																																																											1
CATTGT	1																																																																											1
CATTTG	1																																																																											1
CCAACA	2																																																																											2
CCACCG	1																																																																											1
CCACGG	1																																																																											1
CCCACA	1																																																																											1
CCCACG	1																																																																											1
CCCCAG	1																																																																											1
CCCCCG	1																																																																											1
CCCCGC	1																																																																											1
CCCGCA	2																																																																											2
CCCGTG	1																																																																											1
CCCGTT	1																																																																											1
CCCTCA	1																																																																											1
CCCTCG	1																																																																											1
CCCTGG	1																																																																											1
CCCTGT	1																																																																											1
CCGAAA	80	17																																																																										97
CCGACA	1	1																																																																										2
CCGACT	1																																																																											1
CCGAGA	3	3																																																																										6
CCGCAA	2	1																																																																										3
CCGCAC			1																																																																									1
CCGCAG	1																																																																											1
CCGCCA	1																																																																											1
CCGCCT	1																																																																											1
CCGCGC	1	1																																																																										2
CCGCTC	4																																																																											4
CCGCTG	2																																																																											2
CCGGCT	1																																																																											1
CCGTAC	1																																																																											1
CCGTCA			1																																																																									1
CCGTCG	1																																																																											1
CCTACT	2																																																																											2
CCTCAC		1																																																																										1
CCTCCC	1																																																																											1
CCTCCG	2		1																																																																									3
CCTGCG	1																																																																											1
CGACGG	2																																																																											2
CGACTG	2																																																																											2
CGCACC	1																																																																											1
CGCAGC	1																																																																											1
CGCAGG	2																																																																											2
CGCCCA	2																																																																											2
CGCCCG	1																																																																											1
CGCCCT	1																																																																											1
CGCCGT	1																																																																											1
CGCCTC	1																																																																											1
CGCCTG	1																																																																											1
CGCGAC	1																																																																											1
CGCGCC	1																																																																											1
CGCGGT	1																																																																											1
CGGATA	5																																																																											5
CGGCAG	1																																																																											1
CGGCGT	1																																																																											1
CGGGAC		2	1																																																																									3
CGGGCG	1																																																																											1
CGGTCA	1																																																																											1
CGGTGA	1																																																																											1
CGGTGG	1																																																																											1
CGGTGT	2																																																																											2
CGGTTA	1																																																																											1
CGGTTC	1																																																																											1
CGTAGG	1																																																																											1
CGTCGC	3																																																																											3
CGTGAC	4																																																																											4
CGTGCG	1																																																																											1
CGTGTT	1																																																																											1
CGTTCC	2																																																																											2
CTAAAA	1																																																																											1
CTAAGT	1																																																																											1
CTAATA	1																																																																											1
CTACAC	1																																																																											1
CTACAG	1																																																																											1
CTACTC	1																																																																											1
CTACTG	1																																																																											1
CTAGCC	1																																																																											1
CTATCG	1																																																																											1
CTATCT		1																																																																										1
CTATGG	1																																																																											1
CTATGT	1																																																																											1
CTCATA	1																																																																											1
CTCCCA	1	2																																																																										3
CTCCCC	1																																																																											1
CTCCCT	1																																																																											1
CTCCTT	1																																																																											1
CTCGAA	1																																																																											1
CTCTAC	1																																																																											1
CTGACA	1																																																																											1
CTGAGG	1																																																																											1
CTGATC	2																																																																											2
CTGCGC	3																																																																											3
CTGCGG	1																																																																											1
CTGTAG	1																																																																											1
CTGTAT	1																																																																											1
CTGTCA	3																																																																											3
CTGTCG	1																																																																											1
CTTAAA	1																																																																											1
CTTAAG	1																																																																											1
CTTAAT	1																																																																											1
CTTAGA	1																																																																											1
CTTAGC	1																																																																											1
CTTCAA	2																																																																											2
CTTCAG	1																																																																											1
CTTCCG	1																																																																											1
CTTCTC	1																																																																											1
CTTCTG	1																																																																											1
CTTGAT	1																																																																											1
CTTTTT	1																																																																											1
GAAAAT	1																																																																											1
GAAACC	1																																																																											1
GAAATC	1																																																																											1
GAACCA	2																																																																											2
GAACGC	1																																																																											1
GAACTC	2																																																																											2
GAAGAT	1																																																																											1
GAAGTG	1																																																																											1
GAATAA	1																																																																											1
GAATAT	2																																																																											2
GAATGA	1																																																																											1
GACAAG	1																																																																											1
GACATC	1																																																																											1
GACCAC	1																																																																											1
GACCGA	2																																																																											2
GACGGC	1																																																																											1
GAGAAG	2																																																																											2
GAGAGG	1																																																																											1
GAGCGG	1																																																																											1
GAGGCA	1																																																																											1
GAGGCG	1																																																																											1
GAGTTC	1																																																																											1
GATAAT	1																																																																											1
GATAGT	1																																																																											1
GATATG	1																																																																											1
GATCTA	1																																																																											1
GATCTT	1																																																																											1
GATTAC	1																																																																											1
GATTCC	1																																																																											1
GATTCT	1																																																																											1
GATTTT	1																																																																											1
GCAAGT	1																																																																											1
GCAATA	1																																																																											1
GCACAC	1																																																																											1
GCAGCC	1	1																																																																										2
GCAGGC	1																																																																											1
GCATAG		1																																																																										1
GCATTA	1																																																																											1
GCATTC	1																																																																											1
GCCAAC		1																																																																										1
GCCATC	1																																																																											1
GCCCAC	2																																																																											2
GCCCCC	1																																																																											1
GCCCGC	1																																																																											1
GCCCTC	1																																																																											1
GCCGAA	2	2																																																																										4
GCCGTC	3																																																																											3
GCCTAC	1																																																																											1
GCCTAG	1																																																																											1
GCCTTG	1																																																																											1
GCGAAT	1	1																																																																										2
GCGAGT	1																																																																											1
GCGCAG	2																																																																											2
GCGCGG	1																																																																											1
GCGGAA	1																																																																											1
GCGGAG	1																																																																											1
GCGGCT	1																																																																											1
GCGGGA	1																																																																											1
GCGGGT	2																																																																											2
GCGGTC	1	1																																																																										2
GCGTGC	2																																																																											2
GCTACG	1																																																																											1
GCTATG	1																																																																											1
GCTCCT	1																																																																											1
GCTGCG		1																																																																										1
GCTGGT	1																																																																											1
GCTGTT	1																																																																											1
GCTTCC	1																																																																											1
GCTTCG	1	1	1																																																																									3
GGACCG	1																																																																											1
GGACTA	1																																																																											1
GGAGCA	1																																																																											1
GGAGCC	1																																																																											1
GGAGGC		1																																																																										1
GGCGAC	1																																																																											1
GGCGAG	1																																																																											1
GGCGAT	2																																																																											2
GGCGCA	2																																																																											2
GGCGGG	1																																																																											1
GGCGTG	1																																																																											1
GGCTAC	1																																																																											1
GGCTGG	1																																																																											1
GGGACC	1																																																																											1
GGGAGA	1																																																																											1
GGGGAG	1																																																																											1
GGGGGA	1																																																																											1
GGGGGC	1																																																																											1
GGGTAA		1																																																																										1
GGGTGC		1																																																																										1
GGGTGT	1																																																																											1
GGGTTG	1																																																																											1
GGTCCC	1																																																																											1
GGTCGC		1																																																																										1
GGTGCG	1																																																																											1
GGTGGC	1																																																																											1
GGTGGG	1																																																																											1
GGTGTA	1																																																																											1
GGTGTC	1																																																																											1
GGTGTG		1																																																																										1
GGTTCC	1																																																																											1
GGTTGC	3																																																																											3
GGTTTC	3																																																																											3
GTACAA	1																																																																											1
GTACCA	2																																																																											2
GTACCT	1																																																																											1
GTACGT	1																																																																											1
GTACTA	1																																																																											1
GTACTT	2																																																																											2
GTAGGA	1																																																																											1
GTAGGG	1																																																																											1
GTAGGT	2																																																																											2
GTAGTG	1																																																																											1
GTATAC	1																																																																											1
GTATCA	1																																																																											1
GTCAAG	1																																																																											1
GTCAAT	1																																																																											1
GTCATT	1																																																																											1
GTCGAG	1																																																																											1
GTCGCA	1																																																																											1
GTCGCG	1																																																																											1
GTCGGT	2		1																																																																									3
GTCTAG	1																																																																											1
GTCTTG	1																																																																											1
GTGATA	1																																																																											1
GTGATC	1																																																																											1
GTGCGC	1																																																																											1
GTGCGT	2	1																																																																										3
GTGGGC	3																																																																											3
GTGGGT	3																																																																											3
GTGTAA	2																																																																											2
GTGTAC	1																																																																											1
GTGTGA	1																																																																											1
GTGTGC	3																																																																											3
GTTATG	1																																																																											1
GTTGCA	1																																																																											1
GTTGCG	1																																																																											1
GTTGCT	1																																																																											1
GTTGTG	1																																																																											1
GTTTAC	1																																																																											1
GTTTAT	2																																																																											2
GTTTCG	11	7																																																																										18
GTTTGT	1																																																																											1
GTTTTA	1																																																																											1
GTTTTT	1																																																																											1
TAAAAA	14																																																																											14
TAAAAT	1																																																																											1
TAAACG	1																																																																											1
TAAATA	1																																																																											1
TAACCG	1																																																																											1
TAAGAA	6	1																																																																										7
TAAGGA	22	1	1																																																																									24
TAAGGT	1																																																																											1
TAATAT	1																																																																											1
TAATCA	1																																																																											1
TAATCG	1																																																																											1
TAATTA	2																																																																											2
TAATTT	1																																																																											1
TACAAA	5	2																																																																										7
TACAAC	1																																																																											1
TACACA	1																																																																											1
TACACC	2																																																																											2
TACAGA	2																																																																											2
TACATA	1																																																																											1
TACATG	1																																																																											1
TACCAA	2																																																																											2
TACCAT	1																																																																											1
TACCCA	1																																																																											1
TACCTA	3																																																																											3
TACCTT	1																																																																											1
TACGGC	1																																																																											1
TACGTA	1																																																																											1
TACGTC	1																																																																											1
TACTAG	2																																																																											2
TACTCA	1																																																																											1
TACTCT	1																																																																											1
TACTGC	1																																																																											1
TACTTA	1																																																																											1
TAGAAA	2																																																																											2
TAGAGG	1																																																																											1
TAGCGG	1																																																																											1
TAGGCG	1																																																																											1
TAGGTA	3																																																																											3
TAGGTG	1																																																																											1
TAGGTT	1																																																																											1
TAGTAA	1																																																																											1
TAGTCA		1																																																																										1
TAGTGA	3																																																																											3
TAGTGG	1																																																																											1
TAGTTG	1																																																																											1
TATAAA	1																																																																											1
TATAAC	1																																																																											1
TATAAG	1																																																																											1
TATACA	2																																																																											2
TATACC	2																																																																											2
TATAGA	6																																																																											6
TATATG	3																																																																											3
TATCAA	1																																																																											1
TATCAT	4																																																																											4
TATCCG	6																																																																											6
TATCCT	9																																																																											9
TATCTA	2	1																																																																										3
TATCTT	2																																																																											2
TATTAA	2																																																																											2
TATTAC	1																																																																											1
TATTAG	2	1																																																																										3
TATTCA	2	1																																																																										3
TATTTA	4																																																																											4
TATTTG	7																																																																											7
TATTTT	5																																																																											5
TCAAAA	3																																																																											3
TCAAAT	3																																																																											3
TCAATA	1																																																																											1
TCAATC	1																																																																											1
TCAATG	1																																																																											1
TCAATT	1																																																																											1
TCACAT		1																																																																										1
TCACGG		1			1																																																																							2
TCAGAG	1																																																																											1
TCATAG	1																																																																											1
TCATCC	1																																																																											1
TCATCT	2																																																																											2
TCATTG	1																																																																											1
TCATTT	1																																																																											1
TCCACC	1																																																																											1
TCCCCA	1																																																																											1
TCCGCA	2																																																																											2
TCCGGT	1																																																																											1
TCCTTA	19																																																																											19
TCGCCC	1																																																																											1
TCGCTA	1																																																																											1
TCGGCT	3																																																																											3
TCGGTC	1																																																																											1
TCGTCC	1																																																																											1
TCTAAA	1																																																																											1
TCTACC	1																																																																											1
TCTATA	2																																																																											2
TCTCAG	1																																																																											1
TCTCGG	3																																																																											3
TCTCTT	1																																																																											1
TCTTAT	1																																																																											1
TCTTCC		1																																																																										1
TGAAAA	1																																																																											1
TGAAAT	1																																																																											1
TGAATT	3																																																																											3
TGACAG	1																																																																											1
TGACCG	1																																																																											1
TGACGT	1																																																																											1
TGACTG	1																																																																											1
TGAGCC	1																																																																											1
TGATAA	1																																																																											1
TGATTA	1																																																																											1
TGATTT	1	1	1																																																																									3
TGCCAC	1																																																																											1
TGCGAA		1																																																																										1
TGCGCC	1																																																																											1
TGCGCG	1																																																																											1
TGCGGA	2	1																																																																										3
TGCGGC	1																																																																											1
TGCGGG	1																																																																											1
TGCGGT	6																																																																											6
TGCGTA	1																																																																											1
TGCTAC	1																																																																											1
TGCTGT	1																																																																											1
TGGAAA	1																																																																											1
TGGATA	1																																																																											1
TGGCAA		1	1																																																																									2
TGGCGC	2																																																																											2
TGGCGG	1																																																																											1
TGGGTG	1																																																																											1
TGGTAC	1																																																																											1
TGTAAA	1																																																																											1
TGTATC	1																																																																											1
TGTATG	1																																																																											1
TGTCAA	1																																																																											1
TGTCAG	2																																																																											2
TGTCCA	1																																																																											1
TGTCTA	1																																																																											1
TGTGAT	1																																																																											1
TGTGGT	7																																																																											7
TGTGTA	2				1																																																																							3
TGTGTT	1																																																																											1
TGTTAA	1																																																																											1
TGTTCT	1																																																																											1
TGTTGG	1																																																																											1
TGTTTT	1																																																																											1
TTAAAA	1																																																																											1
TTAAAG	1																																																																											1
TTAACA	1																																																																											1
TTAACC	1																																																																											1
TTAATT	1																																																																											1
TTACAA	1																																																																											1
TTACAC	1																																																																											1
TTACCA	1																																																																											1
TTACTA	1																																																																											1
TTAGAA	1																																																																											1
TTATAA	2																																																																											2
TTATAC	1																																																																											1
TTATAT	3																																																																											3
TTATCA	1																																																																											1
TTATCC	5	1																																																																										6
TTATCT	1																																																																											1
TTATGA	2																																																																											2
TTATGG		1																																																																										1
TTATTC	1																																																																											1
TTATTT	4																																																																											4
TTCAAA	4																																																																											4
TTCATA	2																																																																											2
TTCCAA	1																																																																											1
TTCCGT	1																																																																											1
TTCGAA	1																																																																											1
TTCGGT	97	3																																																																										100
TTCGTC	1																																																																											1
TTCTAA	1																																																																											1
TTCTAT	1																																																																											1
TTCTGA	1																																																																											1
TTCTTA	10	3																																																																										13
TTGAAA	1																																																																											1
TTGAAT	3																																																																											3
TTGACA	2																																																																											2
TTGACG	1																																																																											1
TTGATC	1																																																																											1
TTGATT	2																																																																											2
TTGCAC	1																																																																											1
TTGTAA	1																																																																											1
TTGTAC	1																																																																											1
TTGTCA	2																																																																											2
TTGTGT	2	1																																																																										3
TTGTTC	1																																																																											1
TTGTTT	1																																																																											1
TTTAAA	2																																																																											2
TTTAAT	3																																																																											3
TTTACT	1																																																																											1
TTTAGG	1																																																																											1
TTTATA	1																																																																											1
TTTATC	1																																																																											1
TTTATT	7																																																																											7
TTTCAC	1																																																																											1
TTTCAT	1																																																																											1
TTTCCA	1																																																																											1
TTTCCG	1																																																																											1
TTTCGG	8																																																																											8
TTTCTA	3		1					1																																																																				5
TTTGAA	10	2																																																																										12
TTTGAC	1																																																																											1
TTTGCA	1																																																																											1
TTTGCT	1																																																																											1
TTTGGG	1																																																																											1
TTTGTA	1																																																																											1
TTTGTT	1																																																																											1
TTTTAA	3																																																																											3
TTTTAC	1																																																																											1
TTTTAT	7																																																																											7
TTTTCA	2																																																																											2
TTTTGA	1	1																																																																										2
TTTTGG	1																																																																											1
TTTTTA	11	1		1																																																																								13
TTTTTC	2																																																																											2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	59	32	26	21	21	11	12	11	6	8	5	3	4	2	1	3	2	3	1	1	1		2	2		4	2	1		2		2	1	1	2		2	1				2	2	1		1		1		1				1		2	1	5	272
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	16	21	10	12	9	10	9	10	5	5	7	8	7	5	2	5	2	2	1	5	1	3	2	1	1	1	1		2	1	1	1		2				1	1	1						1			1								1		174
AC/GT	-	-	-	1241	634	442	253	176	122	80	62	40	39	21	19	18	15	10	11	12	9	10	11	15	2	5	1	4	5	3		2	2	3	3	12																																								3282
AG/CT	-	-	-	651	360	150	92	46	13	14	2	4	1	1	1							1																																																						1336
AT/AT	-	-	-	754	340	236	152	86	51	42	20	13	6	4	2	1	1	1	1																																																									1710
CG/CG	-	-	-	32	4	2			1																																																																			39
AAC/GTT	-	-	142	48	12	6	2	1																																																																				211
AAG/CTT	-	-	603	204	60	10	3	1	1									1																																																										883
AAT/ATT	-	-	1661	447	108	47	17	6	2		3	1	1							1				1																																																				2295
ACC/GGT	-	-	56	12	7	2	1	1																																																																				79
ACG/CGT	-	-	17	7	2	1																																																																						27
ACT/AGT	-	-	177	52	12	6	7	3	2	1				2		1			1	1		1	1	1																																																				268
AGC/CTG	-	-	53	9	10	2		1																																																																				75
AGG/CCT	-	-	159	34	9	2		1		2																																																																		207
ATC/ATG	-	-	195	49	14	4	3		1																																																																			266
CCG/CGG	-	-	187	53	17	5	3	1																																																																				266
AAAC/GTTT	-	244	116	70	38	35	16	12	23	5		3	1																																																															563
AAAG/CTTT	-	349	113	42	15	11	15	6	2	3	2	1	1	2	3		8			1																																																								574
AAAT/ATTT	-	3904	796	240	90	39	19	10	8	7	8	5		2	1		4	1																																																										5134
AACC/GGTT	-	47	1			2	1	1		1	2	1	1			2	1									1																																																		61
AACG/CGTT	-	11	3					2																																																																				16
AACT/AGTT	-	50	9							1																																																																		60
AAGC/CTTG	-	21	3																																																																									24
AAGG/CCTT	-	89	7	3	2						1																																																																	102
AAGT/ACTT	-	135	11	2		1																																																																						149
AATC/ATTG	-	88	21	5	2	3																																																																						119
AATG/ATTC	-	180	36	14	6	5	3	4	3	4	2	1	1																																																															259
AATT/AATT	-	160	21	3	1																																																																							185
ACAG/CTGT	-	226	115	26	18	6	6	1	1	2	1							1																																																										403
ACAT/ATGT	-	1696	356	109	51	16	6	9	7	3	7	1	7	4	3	5	7		1																																																									2288
ACCG/CGGT	-	9	8	3																																																																								20
ACCT/AGGT	-	1370	173	39	8	4												1																																																										1595
ACGC/CGTG	-	12	6			2																																																																						20
ACGG/CCGT	-	6	2		1																																																																							9
ACGT/ACGT	-	27	1	1																																																																								29
ACTC/AGTG	-	31	9	3	3	2																																																																						48
ACTG/AGTC	-	106	7			1																																																																						114
AGAT/ATCT	-	209	58	15	8	5	1	2	1		2				2			1																																																										304
AGCC/CTGG	-	8	1	1																																																																								10
AGCG/CGCT	-	5		1																																																																								6
AGCT/AGCT	-	17																																																																										17
AGGC/CCTG	-	12	2																																																																									14
AGGG/CCCT	-	10	1																																																																									11
ATCC/ATGG	-	207	42	5	2		1																																																																					257
ATCG/ATCG	-	6																																																																										6
ATGC/ATGC	-	18	2																																																																									20
CCCG/CGGG	-	13																																																																										13
CCGG/CCGG	-	2																																																																										2
AAAAC/GTTTT	174	3																																																																										177
AAAAG/CTTTT	138	7	1	1					1				1	1																																																														150
AAAAT/ATTTT	1898	86	9	3		2			2	1			2	1																																																														2004
AAACC/GGTTT	46	1																																																																										47
AAACG/CGTTT	26	3																																																																										29
AAACT/AGTTT	105	1		1																																																																								107
AAAGC/CTTTG	34	2																																																																										36
AAAGG/CCTTT	21																																																																											21
AAAGT/ACTTT	82	6																																																																										88
AAATC/ATTTG	272	52	18	3	1	1																																																																						347
AAATG/ATTTC	254	22	3	1				1						1																																																														282
AAATT/AATTT	680	20	1	1	1				1																																																																			704
AACAC/GTGTT	111	7																																																																										118
AACAG/CTGTT	35	6	2	1	2	1																																																																						47
AACAT/ATGTT	93	3										1																																																																97
AACCC/GGGTT	7	1																																																																										8
AACCG/CGGTT	17																																																																											17
AACCT/AGGTT	367	64	20	12	3	6	2	5	4	5	3	6	22																																																															519
AACGC/CGTTG	23	1																																																																										24
AACGG/CCGTT	15																																																																											15
AACGT/ACGTT	62	3																																																																										65
AACTC/AGTTG	38																																																																											38
AACTG/AGTTC	62	3																																																																										65
AACTT/AAGTT	43	4		1																																																																								48
AAGAC/CTTGT	37	2											1	1																																																														41
AAGAG/CTCTT	53	2		1			1																																																																					57
AAGAT/ATCTT	75	5	1						1																																																																			82
AAGCC/CTTGG	15																																																																											15
AAGCG/CGCTT	17																																																																											17
AAGCT/AGCTT	53	1																																																																										54
AAGGC/CCTTG	19																																																																											19
AAGGG/CCCTT	10																																																																											10
AAGGT/ACCTT	165	6	2					1					1	1																																																														176
AAGTC/ACTTG	35	2																																																																										37
AAGTG/ACTTC	40	4																																																																										44
AATAC/ATTGT	262	25	8	2	1	1	2		1				3	1																																																														306
AATAG/ATTCT	204	40	13	3		2	1		1		2		3	1																																																														270
AATAT/ATATT	410	6	1	1						1																																																																		419
AATCC/ATTGG	42	3																																																																										45
AATCG/ATTCG	55	4	1																																																																									60
AATCT/AGATT	90	2		1						1																																																																		94
AATGC/ATTGC	64	3																																																																										67
AATGG/ATTCC	58	9	1		1		1					1																																																																71
AATGT/ACATT	251	13	3																																																																									267
AATTC/AATTG	647	142	24	2	2	1	1			2				1																																																														822
ACACC/GGTGT	58	3																																																																										61
ACACG/CGTGT	39	2																																																																										41
ACACT/AGTGT	90	14	3	1	1		1																																																																					110
ACAGC/CTGTG	24		1																																																																									25
ACAGG/CCTGT	17										1																																																																	18
ACAGT/ACTGT	78	9	1																																																																									88
ACATC/ATGTG	47	4	1	1		1																																																																						54
ACATG/ATGTC	117	6	1																																																																									124
ACCAG/CTGGT	18																																																																											18
ACCAT/ATGGT	73	6		1					1																																																																			81
ACCCC/GGGGT	7																																																																											7
ACCCG/CGGGT	2	1																																																																										3
ACCCT/AGGGT	41	4																																																																										45
ACCGC/CGGTG	24	3																																																																										27
ACCGG/CCGGT	8																																																																											8
ACCGT/ACGGT	30	2	2	1																																																																								35
ACCTC/AGGTG	20																																																																											20
ACCTG/AGGTC	17																																																																											17
ACGAG/CGTCT	21																																																																											21
ACGAT/ATCGT	62	3																																																																										65
ACGCC/CGTGG	15	2	2																																																																									19
ACGCG/CGCGT	39	1																																																																										40
ACGCT/AGCGT	28																																																																											28
ACGGC/CCGTG	10																																																																											10
ACGGG/CCCGT	3	1										1																																																																5
ACGTC/ACGTG	64	2	1																																																																									67
ACTAG/AGTCT	84	5																																																																										89
ACTAT/AGTAT	131	10	3	1	1	1	1	1	3	2			4																																																															158
ACTCC/AGTGG	17																																																																											17
ACTCG/AGTCG	15																																																																											15
ACTCT/AGAGT	40		1		1	1					1			1																																																														45
ACTGC/AGTGC	28																																																																											28
ACTGG/AGTCC	21																																																																											21
AGAGC/CTCTG	8																																																																											8
AGAGG/CCTCT	52	8	2	1																																																																								63
AGATC/ATCTG	23	2	1																																																																									26
AGATG/ATCTC	40	1	1																																																																									42
AGCAT/ATGCT	44	2		2																																																																								48
AGCCC/CTGGG	10																																																																											10
AGCCG/CGGCT	8																																																																											8
AGCCT/AGGCT	24	4																																																																										28
AGCGC/CGCTG	11																																																																											11
AGCGG/CCGCT	8																																																																											8
AGCTC/AGCTG	17																																																																											17
AGGAT/ATCCT	66	1	1																																																																									68
AGGCC/CCTGG	8																																																																											8
AGGCG/CCTCG	11	2		1																																																																								14
AGGGC/CCCTG	5																																																																											5
AGGGG/CCCCT	12																																																																											12
ATATC/ATATG	67	1	2				1					1																																																																72
ATCCC/ATGGG	24		1																																																																									25
ATCCG/ATCGG	7																																																																											7
ATCGC/ATGCG	30	2																																																																										32
ATGCC/ATGGC	32	2																																																																										34
CCCCG/CGGGG	9	1																																																																										10
CCCGG/CCGGG	1																																																																											1
CCGCG/CGCGG	62	4	1																																																																									67
AAAAAC/GTTTTT	8																																																																											8
AAAAAG/CTTTTT	5																																																																											5
AAAAAT/ATTTTT	105	2		1																																																																								108
AAAACC/GGTTTT	1																																																																											1
AAAACT/AGTTTT	2																																																																											2
AAAAGC/CTTTTG	1																																																																											1
AAAAGT/ACTTTT	5																																																																											5
AAAATC/ATTTTG	26	3	1																																																																									30
AAAATG/ATTTTC	14																																																																											14
AAAATT/AATTTT	25			1																																																																								26
AAACAC/GTGTTT	5	1																																																																										6
AAACAT/ATGTTT	2	1																																																																										3
AAACCC/GGGTTT	1																																																																											1
AAACCG/CGGTTT	226	28																																																																										254
AAACCT/AGGTTT	4																																																																											4
AAACGG/CCGTTT	2																																																																											2
AAACGT/ACGTTT	4																																																																											4
AAACTC/AGTTTG	1																																																																											1
AAACTT/AAGTTT	2																																																																											2
AAAGAC/CTTTGT	1																																																																											1
AAAGAG/CTCTTT	2																																																																											2
AAAGAT/ATCTTT	6																																																																											6
AAAGGT/ACCTTT	4																																																																											4
AAAGTC/ACTTTG	2																																																																											2
AAAGTG/ACTTTC	2																																																																											2
AAAGTT/AACTTT	2																																																																											2
AAATAC/ATTTGT	25	3																																																																										28
AAATAG/ATTTCT	8		1					1																																																																				10
AAATAT/ATATTT	15									1																																																																		16
AAATCC/ATTTGG	1																																																																											1
AAATCG/ATTTCG	1																																																																											1
AAATCT/AGATTT	2																																																																											2
AAATGC/ATTTGC	2																																																																											2
AAATGG/ATTTCC	2																																																																											2
AAATGT/ACATTT	1																																																																											1
AAATTC/AATTTG	45	6																																																																										51
AAATTG/AATTTC	8																																																																											8
AAATTT/AAATTT	3																																																																											3
AACAAG/CTTGTT	2																																																																											2
AACAAT/ATTGTT	2		1																																																																									3
AACACC/GGTGTT	5																																																																											5
AACACG/CGTGTT	1																																																																											1
AACAGC/CTGTTG	5																																																																											5
AACAGG/CCTGTT		1																																																																										1
AACAGT/ACTGTT	1																																																																											1
AACATG/ATGTTC	2																																																																											2
AACATT/AATGTT	7																																																																											7
AACCAC/GGTTGT	13																																																																											13
AACCAG/CTGGTT	3																																																																											3
AACCAT/ATGGTT	3	1																																																																										4
AACCCC/GGGGTT	1																																																																											1
AACCGC/CGGTTG	14	1																																																																										15
AACCGG/CCGGTT	3																																																																											3
AACCGT/ACGGTT	2																																																																											2
AACCTG/AGGTTC	1																																																																											1
AACCTT/AAGGTT	3																																																																											3
AACGAC/CGTTGT	1																																																																											1
AACGAT/ATCGTT	1																																																																											1
AACGCC/CGTTGG		1																																																																										1
AACGCG/CGCGTT	1																																																																											1
AACGGC/CCGTTG	1																																																																											1
AACGGG/CCCGTT	4																																																																											4
AACGTC/ACGTTG	3																																																																											3
AACGTG/ACGTTC	1																																																																											1
AACGTT/AACGTT	2	1																																																																										3
AACTAC/AGTTGT	2																																																																											2
AACTAT/AGTTAT	2																																																																											2
AACTCG/AGTTCG	4																																																																											4
AACTCT/AGAGTT	3																																																																											3
AACTGC/AGTTGC	1	2																																																																										3
AACTGT/ACAGTT	1																																																																											1
AACTTC/AAGTTG	3																																																																											3
AAGAAT/ATTCTT	25	5		1																																																																								31
AAGACC/CTTGGT	4	1																																																																										5
AAGACG/CGTCTT	2																																																																											2
AAGACT/AGTCTT	1																																																																											1
AAGAGC/CTCTTG	1																																																																											1
AAGAGG/CCTCTT		1																																																																										1
AAGAGT/ACTCTT	1																																																																											1
AAGATC/ATCTTG	3																																																																											3
AAGATG/ATCTTC	4																																																																											4
AAGATT/AATCTT	2																																																																											2
AAGCAG/CTGCTT	1																																																																											1
AAGCAT/ATGCTT	1																																																																											1
AAGCCG/CGGCTT	7	3	1																																																																									11
AAGCGG/CCGCTT	5																																																																											5
AAGCTG/AGCTTC	1																																																																											1
AAGCTT/AAGCTT	1																																																																											1
AAGGAC/CCTTGT	1																																																																											1
AAGGAG/CCTTCT	5																																																																											5
AAGGAT/ATCCTT	68	7	1	1																																																																								77
AAGGCC/CCTTGG	1																																																																											1
AAGGCT/AGCCTT	2																																																																											2
AAGGGT/ACCCTT		1																																																																										1
AAGGTC/ACCTTG	2																																																																											2
AAGGTG/ACCTTC	1																																																																											1
AAGTAC/ACTTGT	5	1																																																																										6
AAGTAT/ACTTAT	8																																																																											8
AAGTCT/ACTTAG	2																																																																											2
AAGTGC/ACTTGC	3																																																																											3
AAGTGG/ACTTCC	1																																																																											1
AAGTGT/ACACTT	4																																																																											4
AATACC/ATTGGT	3																																																																											3
AATACG/ATTCGT	2																																																																											2
AATACT/AGTATT	6	1																																																																										7
AATAGC/ATTGCT	2																																																																											2
AATAGG/ATTCCT	1																																																																											1
AATAGT/ACTATT	3																																																																											3
AATATC/ATATTG	3																																																																											3
AATATG/ATATTC	22	1																																																																										23
AATATT/AATATT	4	1																																																																										5
AATCAC/ATTGTG	1																																																																											1
AATCAG/ATTCTG	3																																																																											3
AATCAT/ATGATT	12																																																																											12
AATCCT/AGGATT	1																																																																											1
AATCGG/ATTCCG	1																																																																											1
AATCGT/ACGATT	2																																																																											2
AATCTC/AGATTG	1																																																																											1
AATCTG/AGATTC	2																																																																											2
AATGAC/ATTGTC	8																																																																											8
AATGAG/ATTCTC	2																																																																											2
AATGAT/ATCATT	14	1																																																																										15
AATGCG/ATTCGC	3	4																																																																										7
AATGCT/AGCATT	1																																																																											1
AATGGC/ATTGCC		1	1																																																																									2
AATGGT/ACCATT	3																																																																											3
AATGTC/ACATTG	7																																																																											7
AATGTG/ACATTC	2	1																																																																										3
AATTAC/AATTGT	4																																																																											4
AATTAG/AATTCT	2																																																																											2
AATTAT/AATTAT	9																																																																											9
AATTCC/AATTGG	2																																																																											2
AATTCG/AATTCG	1																																																																											1
ACACAT/ATGTGT	14				1																																																																							15
ACACCC/GGGTGT	9	1																																																																										10
ACACCG/CGGTGT	7	1	1																																																																									9
ACACCT/AGGTGT	10																																																																											10
ACACGC/CGTGTG	7	1	1	1																																																																								10
ACACGT/ACGTGT	4																																																																											4
ACACTC/AGTGTG	1																																																																											1
ACACTG/AGTGTC	3																																																																											3
ACAGAT/ATCTGT	5																																																																											5
ACAGCG/CGCTGT	1																																																																											1
ACAGCT/AGCTGT	2																																																																											2
ACAGGC/CCTGTG	1																																																																											1
ACAGGG/CCCTGT	2																																																																											2
ACAGGT/ACCTGT	1																																																																											1
ACAGTC/ACTGTG	2																																																																											2
ACAGTG/ACTGTC	6																																																																											6
ACATAG/ATGTCT	3																																																																											3
ACATAT/ATATGT	14																																																																											14
ACATCC/ATGTGG	1																																																																											1
ACATCG/ATGTCG	1																																																																											1
ACATGG/ATGTCC	1																																																																											1
ACATGT/ACATGT	1																																																																											1
ACCACG/CGTGGT	2																																																																											2
ACCACT/AGTGGT	2																																																																											2
ACCAGC/CTGGTG	2																																																																											2
ACCAGT/ACTGGT	4																																																																											4
ACCCAG/CTGGGT	1																																																																											1
ACCCAT/ATGGGT	2																																																																											2
ACCCCC/GGGGGT	1																																																																											1
ACCCCT/AGGGGT	1																																																																											1
ACCCGC/CGGGTG	8	1	1																																																																									10
ACCCGT/ACGGGT	1																																																																											1
ACCCTC/AGGGTG	1	1																																																																										2
ACCGAG/CGGTCT	9	3																																																																										12
ACCGAT/ATCGGT		1																																																																										1
ACCGCC/CGGTGG	5																																																																											5
ACCGCG/CGCGGT	4	2																																																																										6
ACCGCT/AGCGGT	1																																																																											1
ACCGGC/CCGGTG	1																																																																											1
ACCGGG/CCCGGT	3	2	1																																																																									6
ACCGTC/ACGGTG	1		1																																																																									2
ACCGTG/ACGGTC	6	1			1																																																																							8
ACCTAG/AGGTCT	1																																																																											1
ACCTAT/AGGTAT	10																																																																											10
ACCTCC/AGGTGG	1																																																																											1
ACCTCG/AGGTCG	1																																																																											1
ACCTCT/AGAGGT	3																																																																											3
ACCTGC/AGGTGC	1																																																																											1
ACGACT/AGTCGT	1																																																																											1
ACGAGG/CCTCGT	1																																																																											1
ACGAGT/ACTCGT	1																																																																											1
ACGATC/ATCGTG	1																																																																											1
ACGATG/ATCGTC	1																																																																											1
ACGCAT/ATGCGT	1																																																																											1
ACGCCC/CGTGGG	9																																																																											9
ACGCCG/CGGCGT	1																																																																											1
ACGCCT/AGGCGT	3																																																																											3
ACGCGC/CGCGTG	5																																																																											5
ACGCGG/CCGCGT	1																																																																											1
ACGGAT/ATCCGT	11																																																																											11
ACGGCC/CCGTGG	1																																																																											1
ACGGCG/CCGTCG	12																																																																											12
ACGGCT/AGCCGT	3																																																																											3
ACGGGC/CCCGTG	1																																																																											1
ACGTAG/ACGTCT	1																																																																											1
ACGTAT/ACGTAT	2																																																																											2
ACGTCG/ACGTCG	1																																																																											1
ACTAGC/AGTGCT	1																																																																											1
ACTAGG/AGTCCT	1																																																																											1
ACTAGT/ACTAGT	4																																																																											4
ACTATC/AGTGAT	5																																																																											5
ACTATG/AGTCAT	3	1																																																																										4
ACTCAT/AGTATG	2																																																																											2
ACTCCC/AGTGGG	2	2																																																																										4
ACTCCG/AGTCGG	1																																																																											1
ACTCCT/AGGAGT	4																																																																											4
ACTCGC/AGTGCG	1																																																																											1
ACTCTG/AGAGTC	1																																																																											1
ACTGAG/AGTCTC	1																																																																											1
ACTGAT/AGTATC	1																																																																											1
ACTGCC/AGTGGC	1																																																																											1
ACTGCG/AGTCGC	4																																																																											4
ACTGCT/AGCAGT	4																																																																											4
AGAGAT/ATCTCT		1																																																																										1
AGAGCT/AGCTCT	1																																																																											1
AGAGGC/CCTCTG	1																																																																											1
AGAGGG/CCCTCT	3																																																																											3
AGATAT/ATATCT	14	1																																																																										15
AGATCC/ATCTGG	1																																																																											1
AGATCT/AGATCT	1																																																																											1
AGATGG/ATCTCC	1																																																																											1
AGCAGG/CCTGCT	3	1																																																																										4
AGCATC/ATGCTG	2																																																																											2
AGCCAT/ATGGCT	2																																																																											2
AGCCCC/CTGGGG	2																																																																											2
AGCCCT/AGGGCT	1																																																																											1
AGCCGC/CGGCTG	6	2																																																																										8
AGCCGG/CCGGCT	2																																																																											2
AGCCTC/AGGCTG	1																																																																											1
AGCCTG/AGGCTC	1																																																																											1
AGCGAT/ATCGCT	3																																																																											3
AGCGCC/CGCTGG	3																																																																											3
AGCGGC/CCGCTG	3																																																																											3
AGCGGG/CCCGCT	9																																																																											9
AGCTAT/AGCTAT	1																																																																											1
AGGATC/ATCCTG	2																																																																											2
AGGATG/ATCCTC	1																																																																											1
AGGCAT/ATGCCT		1																																																																										1
AGGCCT/AGGCCT	1																																																																											1
AGGCGC/CCTGCG	14																																																																											14
AGGCGG/CCGCCT	7	1	1																																																																									9
AGGGCC/CCCTGG	1																																																																											1
AGGGCG/CCCTCG	5																																																																											5
AGGGGG/CCCCCT	4																																																																											4
ATATCC/ATATGG	2																																																																											2
ATATCG/ATATCG	2																																																																											2
ATCATG/ATCATG	1																																																																											1
ATCCCC/ATGGGG	2																																																																											2
ATCCGC/ATGCGG	5	1																																																																										6
ATCGCC/ATGGCG	4	1																																																																										5
ATGCCC/ATGGGC	1																																																																											1
ATGCGC/ATGCGC	1																																																																											1
CCCCCG/CGGGGG	5																																																																											5
CCCGCG/CGCGGG	6	1																																																																										7
