Specifications
==============

Sequence source file: "/srv/lustre01/project/qmm_mm_pet-j9cm8n271e4/shared/webserver/new-megassr-v5/results/6ae339fff00d1/fasta/6ae339fff00d1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              603819
Total size of examined sequences (bp):           230032250
Total number of identified SSRs:                 15828
Number of SSR containing sequences:              15059
Number of sequences containing more than 1 SSR:  670
Number of SSRs present in compound formation:    492


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	73
2	6026
3	2449
4	1333
5	5239
6	708

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	11	6	4	3		1	1	33
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1				1		1		3
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1		1	1	1	1		5
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	13	6	2	4	4		2	1	32
AC	-	-	-	112	57	32	17	8	4	1	1															232
AG	-	-	-	269	172	113	90	60	22	14	3															743
AT	-	-	-	564	263	213	137	107	56	33	14															1387
CA	-	-	-	70	32	18	5	6	2																	133
CG	-	-	-	7	3																					10
CT	-	-	-	176	88	75	43	28	22	7	4	1														444
GA	-	-	-	226	112	77	72	46	32	15	5	2														587
GC	-	-	-	9	1			1																		11
GT	-	-	-	70	42	15	7	7	1	4																146
TA	-	-	-	625	347	221	145	110	56	35	7															1546
TC	-	-	-	202	121	91	59	42	32	8	4															559
TG	-	-	-	129	41	19	18	13	4	2	2															228
AAC	-	-	14	3	1																					18
AAG	-	-	53	8	1	3																				65
AAT	-	-	265	55	13																					333
ACA	-	-	16	6		1																				23
ACC	-	-	3																							3
ACG	-	-	4	1																						5
ACT	-	-	22	1	2	1																				26
AGA	-	-	43	11				1																		55
AGC	-	-	1		1																					2
AGG	-	-	13	2	1																					16
AGT	-	-	13	9	2	1																				25
ATA	-	-	154	33	11	2																				200
ATC	-	-	20	3	1	1																				25
ATG	-	-	13	2	1																					16
ATT	-	-	180	41	9	3	1																			234
CAA	-	-	21	3	1	1																				26
CAC	-	-	2																							2
CAG	-	-	4	1																						5
CAT	-	-	5	4																						9
CCA	-	-	7		1																					8
CCG	-	-	1	1																						2
CCT	-	-	10																							10
CGA	-	-	3																							3
CGC	-	-	5																							5
CGG	-	-	2																							2
CGT	-	-	2		1																					3
CTA	-	-	10	5	1																					16
CTC	-	-	10	2																						12
CTT	-	-	35	9		1																				45
GAA	-	-	57	10	2																					69
GAC	-	-	5																							5
GAG	-	-	12	4		1																				17
GAT	-	-	15	3	2																					20
GCA	-	-	4	1																						5
GCC	-	-	1	1																						2
GCG	-	-	2	1																						3
GCT	-	-	2																							2
GGA	-	-	9	1																						10
GGC	-	-	5																							5
GGT	-	-	2	1																						3
GTA	-	-	16	6			1																			23
GTC	-	-	2	4			1																			7
GTG	-	-	7																							7
GTT	-	-	11	2																						13
TAA	-	-	206	41	10	1																				258
TAC	-	-	16	6	1																					23
TAG	-	-	23	8	3																					34
TAT	-	-	197	36	8	2	1																			244
TCA	-	-	23	2																						25
TCC	-	-	13	1																						14
TCG	-	-	7	1																						8
TCT	-	-	33	4	2																					39
TGA	-	-	20	7	1																					28
TGC	-	-	6																							6
TGG	-	-	2	1																						3
TGT	-	-	7		1																					8
TTA	-	-	226	37	16																					279
TTC	-	-	57	10	2		1																			70
TTG	-	-	19	6																						25
AAAC	-	11	3																							14
AAAG	-	17	1		1																					19
AAAT	-	89	6																							95
AACA	-	6	1																							7
AACC	-	1																								1
AACG	-	1																								1
AACT	-	4	1																							5
AAGA	-	9		1																						10
AAGG	-	4	1																							5
AAGT	-	8	1																							9
AATA	-	46	2	1																						49
AATC	-	7																								7
AATG	-	6																								6
AATT	-	50	1																							51
ACAA	-	5																								5
ACAT	-	17	3																							20
ACCG	-		1																							1
ACCT	-	2				1																				3
ACGG	-	1																								1
ACGT	-	1																								1
ACTA	-	4		1																						5
ACTC	-	2																								2
ACTG	-	1																								1
ACTT	-	7	1	1																						9
AGAA	-	6																								6
AGAC	-	3																								3
AGAT	-	7																								7
AGCT	-	1																								1
AGGA	-	4																								4
AGGT	-	1																								1
AGTA	-	5	1																							6
AGTT	-	3																								3
ATAA	-	36	1																							37
ATAC	-	20	1																							21
ATAG	-	9	1		1																					11
ATCA	-	4	1																							5
ATCC	-	2																								2
ATCT	-	3																								3
ATGA	-	3																								3
ATGG	-	1																								1
ATGT	-	25	4																							29
ATTA	-	32	2																							34
ATTC	-	6																								6
ATTG	-	6	2																							8
ATTT	-	57	3																							60
CAAA	-	6																								6
CAAC	-	4		1																						5
CAAG	-		1																							1
CAAT	-	6																								6
CAGA	-	1																								1
CATA	-	4	2																							6
CATC	-	3																								3
CATT	-	3																								3
CCAA	-		2																							2
CCTA	-	1																								1
CCTC	-	2																								2
CCTT	-	4																								4
CGTC	-	1																								1
CGTG	-	1																								1
CTAA	-	2																								2
CTAC	-	2																								2
CTAT	-	3	3																							6
CTCA	-	1	1																							2
CTCC	-	3																								3
CTGA	-	1																								1
CTGT	-	1	1																							2
CTTA	-		2																							2
CTTC	-	2																								2
CTTT	-	6																								6
GAAA	-	15																								15
GAAG	-	6	2	1																						9
GAAT	-	6																								6
GAGG	-	2																								2
GATA	-	5																								5
GATC	-	1																								1
GATG	-	1																								1
GATT	-	3																								3
GCAA	-	1																								1
GCAC	-	1																								1
GCAG	-	1																								1
GCTC	-	1																								1
GCTT	-	1																								1
GGAA	-	2																								2
GGAT	-	1																								1
GGTA	-	1																								1
GGTC	-			1																						1
GGTT	-	1																								1
GTAA	-	2	1	1																						4
GTAC	-		1																							1
GTAG	-	1																								1
GTAT	-	9	1																							10
GTCT	-	1																								1
GTGC	-	1																								1
GTTA	-	3																								3
GTTC	-	1																								1
GTTG	-	3	1																							4
GTTT	-	3																								3
TAAA	-	50	3																							53
TAAC	-	8		1	1																					10
TAAG	-	11	2																							13
TAAT	-	37	2																							39
TACA	-	73	4																							77
TACT	-	5																								5
TAGA	-	4																								4
TAGC	-	1																								1
TAGG	-	1		1																						2
TAGT	-	3	2	1																						6
TATC	-	6	1																							7
TATG	-	32	3																							35
TATT	-	33	4		1																					38
TCAA	-	9	1																							10
TCAC	-	1																								1
TCAT	-	3	1																							4
TCCA	-	2		1																						3
TCCG	-	1																								1
TCCT	-	2																								2
TCGA	-	1																								1
TCTA	-	5																								5
TCTG	-	1																								1
TCTT	-	8																								8
TGAA	-	3	1																							4
TGAT	-	1	1																							2
TGGA	-	1																								1
TGTA	-	41	7	1																						49
TGTC	-	2																								2
TGTT	-	1																								1
TTAA	-	42	2																							44
TTAC	-	7	1																							8
TTAG	-	2	1																							3
TTAT	-	38	2																							40
TTCA	-	6	1																							7
TTCC	-	4	1																							5
TTCG	-	1																								1
TTCT	-	10			1																					11
TTGA	-	3																								3
TTGG	-	1																								1
TTGT	-	1	2	1																						4
TTTA	-	66	7																							73
TTTC	-	12																								12
TTTG	-	5	1																							6
AAAAC	24	1																								25
AAAAG	46	1																								47
AAAAT	156	5																								161
AAACA	14	2																								16
AAACC	23	3	1																							27
AAACG	2																									2
AAACT	14	3	1																							18
AAAGA	28	1																								29
AAAGC	1																									1
AAAGG	7																									7
AAAGT	13																									13
AAATA	85	1																								86
AAATC	11																									11
AAATG	19	1																								20
AAATT	87	6																								93
AACAA	23	2																								25
AACAC	3																									3
AACAG	2																									2
AACAT	10	1																								11
AACCA	16	3																								19
AACCC	83	6	1																							90
AACCG	2																									2
AACCT	21	2	1																							24
AACGA	1																									1
AACGC		1																								1
AACGG	1																									1
AACGT	1																									1
AACTA	15	1																								16
AACTC	7	1																								8
AACTG	2																									2
AACTT	9																									9
AAGAA	33	1																								34
AAGAC	1	1																								2
AAGAG	5		1																							6
AAGAT	7																									7
AAGCA	2																									2
AAGCC	2	1																								3
AAGCT	2																									2
AAGGA	5																									5
AAGGC	1																									1
AAGGG	2	1																								3
AAGGT	2	1																								3
AAGTA	3	1																								4
AAGTC	3																									3
AAGTT	7	2																								9
AATAA	81	4																								85
AATAC	21	1																								22
AATAG	13	2																								15
AATAT	27																									27
AATCA	14																									14
AATCC	25	3																								28
AATCG	2																									2
AATCT	6																									6
AATGA	8																									8
AATGC	3																									3
AATGG	3																									3
AATGT	15																									15
AATTA	57	2																								59
AATTC	14	1	1																							16
AATTG	10																									10
AATTT	64																									64
ACAAA	14	2																								16
ACAAC	3																									3
ACAAG	1																									1
ACAAT	13	1																								14
ACACA	4	1																								5
ACACC	1																									1
ACAGA	1																									1
ACAGT	3																									3
ACATA	6																									6
ACATG	2																									2
ACATT	4																									4
ACCAA	5	2	1																							8
ACCAT	4	1																								5
ACCCA	34	6	1																							41
ACCCT	1																									1
ACCGA	1																									1
ACCTA	6																									6
ACCTC	2																									2
ACCTT	1																									1
ACGAA		1																								1
ACGAT	2																									2
ACGCA	2																									2
ACGCG	1																									1
ACGTA	1	1																								2
ACGTC	1																									1
ACGTT	1	1																								2
ACTAA	5	1																								6
ACTAC	1																									1
ACTAT	6	3																								9
ACTCA	4																									4
ACTCT	2	1																								3
ACTGA	2																									2
ACTGC		1																								1
ACTGG	1																									1
ACTGT	1		1																							2
ACTTA	7	1																								8
ACTTG	3																									3
ACTTT	3	1																								4
AGAAA	32																									32
AGAAC	2																									2
AGAAG	4		1																							5
AGAAT	11																									11
AGACA	4																									4
AGACC	1																									1
AGACT	1	1																								2
AGAGA	2	1																								3
AGATA	7																									7
AGATC	1																									1
AGATG	1																									1
AGATT	5	1																								6
AGCAA	1																									1
AGCAC	1																									1
AGCAG	1																									1
AGCCA	4	2																								6
AGCCC	1																									1
AGCGT	1																									1
AGCTA	1																									1
AGCTT	1																									1
AGGAA	5																									5
AGGAC	2																									2
AGGAG	2																									2
AGGAT	4																									4
AGGCC				1																						1
AGGGA	2																									2
AGGGC	1																									1
AGGGG	2																									2
AGGTA	1																									1
AGGTT	5	1																								6
AGTAA	14																									14
AGTAC	2																									2
AGTAG	1	1																								2
AGTAT	2			1																						3
AGTCA	1																									1
AGTCT		1																								1
AGTGA	2																									2
AGTGC	1																									1
AGTTA	3																									3
AGTTC	4																									4
AGTTG	9																									9
AGTTT	4	1	1																							6
ATAAA	52	2																								54
ATAAC	9		1																							10
ATAAG	3																									3
ATAAT	33	1																								34
ATACA	22	2																								24
ATACC	5																									5
ATACG	2																									2
ATACT	6		1																							7
ATAGA	6	1																								7
ATAGG	4																									4
ATAGT	3	1																								4
ATATA	27	2																								29
ATATC	8	1																								9
ATATG	13																									13
ATATT	13	1																								14
ATCAA	7	1																								8
ATCAC	5																									5
ATCAG	1																									1
ATCAT	7																									7
ATCCA	8	1																								9
ATCCC	1																									1
ATCCT	2	1																								3
ATCGG	1																									1
ATCGT	1																									1
ATCTA	2	1																								3
ATCTG	2																									2
ATCTT	3																									3
ATGAA	9																									9
ATGAC	4																									4
ATGAG	2																									2
ATGAT	8																									8
ATGCA	3																									3
ATGCC	1																									1
ATGGA	2																									2
ATGGG		1																								1
ATGGT	2																									2
ATGTA	8																									8
ATGTG	1																									1
ATGTT	5																									5
ATTAA	40	1																								41
ATTAC	12	1																								13
ATTAG	10		1																							11
ATTAT	25																									25
ATTCA	9	1																								10
ATTCC	3	1																								4
ATTCG	1																									1
ATTCT	9																									9
ATTGA	11	1																								12
ATTGC	1																									1
ATTGG	14	1																								15
ATTGT	13																									13
ATTTA	37	2																								39
ATTTC	8	1																								9
ATTTG	5																									5
ATTTT	102	4																								106
CAAAA	22																									22
CAAAC	8	3																								11
CAAAG	1			1																						2
CAAAT	6																									6
CAACA	2	1																								3
CAACC	84	7	2																							93
CAACG	6																									6
CAACT	13																									13
CAAGA		1																								1
CAAGC	1																									1
CAAGT		1																								1
CAATA	4	2																								6
CAATC	15	1																								16
CAATG		1																								1
CAATT	13																									13
CACAA	2																									2
CACAG	1																									1
CACAT	3																									3
CACGG	1																									1
CACTC	1																									1
CACTT	1																									1
CAGAA	1	1																								2
CAGAC	1																									1
CAGAG	3																									3
CAGGA	1																									1
CAGGG	1																									1
CAGTA	1																									1
CAGTC	1																									1
CAGTG	1																									1
CAGTT	2																									2
CATAA	5																									5
CATAC	3																									3
CATAG	2																									2
CATAT	3																									3
CATCA	1																									1
CATCT	1																									1
CATGA	1																									1
CATGC	1																									1
CATGT	2																									2
CATTA	7																									7
CATTC	4																									4
CATTG	1	1																								2
CATTT	5	1																								6
CCAAA	7	3	1																							11
CCAAC	97	7	1																							105
CCAAG	5		2																							7
CCAAT	18		1																							19
CCAGA	1																									1
CCAGC		1																								1
CCATA	4	1	1																							6
CCATC	1																									1
CCCAA	32		1																							33
CCCAC	2																									2
CCCAG	1																									1
CCCCA	1																									1
CCCCT	1																									1
CCCTC	3																									3
CCGAA	1																									1
CCGAC	1																									1
CCGAT	2																									2
CCGGA	1																									1
CCGTC	1																									1
CCTAA	4	1																								5
CCTAC	1																									1
CCTCC	2																									2
CCTCG	1																									1
CCTGA	1																									1
CCTGC	1																									1
CCTTA	1																									1
CCTTC	1																									1
CCTTT	1	1																								2
CGAAA	2	1																								3
CGAAC	2																									2
CGAAT	2																									2
CGACG	1																									1
CGAGC	1																									1
CGAGT	3																									3
CGATA	1																									1
CGATT	1																									1
CGCCA	1																									1
CGCGA	1																									1
CGGAC	1																									1
CGGGG	1																									1
CGGGT	1																									1
CGGTT	1																									1
CGTAA	1																									1
CGTAT	1																									1
CGTCA	1																									1
CGTCC	2	1																								3
CGTCG	1																									1
CGTGG	1																									1
CGTTG	1																									1
CGTTT	2																									2
CTAAA	12																									12
CTAAC	14																									14
CTAAG		1																								1
CTAAT	5	1																								6
CTACC	1																									1
CTACG	1																									1
CTACT	2																									2
CTAGA	1																									1
CTAGT	1																									1
CTATA	5																									5
CTATC	3																									3
CTATT	4																									4
CTCAA	5	1																								6
CTCAC	1																									1
CTCCT	1																									1
CTCGA	1																									1
CTCTA				1																						1
CTCTC	1																									1
CTCTT	1																									1
CTGAA	3																									3
CTGGG	1																									1
CTGTA	3																									3
CTGTT	2	1																								3
CTTAA	4																									4
CTTAC	3																									3
CTTAG	3																									3
CTTAT	3																									3
CTTCA	3																									3
CTTCC	3	1																								4
CTTCT	3																									3
CTTGA	3																									3
CTTGG	2																									2
CTTTA	7																									7
CTTTC	6	2																								8
CTTTG	1		1																							2
CTTTT	25																									25
GAAAA	44	1																								45
GAAAG	6																									6
GAAAT	13	1																								14
GAACA	2																									2
GAACC	2																									2
GAACT	2																									2
GAAGA	10	1																								11
GAAGG	1																									1
GAAGT	1																									1
GAATA	4																									4
GAATC	1																									1
GAATG	3																									3
GAATT	3																									3
GACAA	1																									1
GACAT	2																									2
GACGT	1																									1
GACTG	1																									1
GACTT	2																									2
GAGAA	3	1																								4
GAGAG	1	1																								2
GAGAT	2																									2
GAGCA	2																									2
GAGGC	1																									1
GAGGG	2																									2
GAGGT	1																									1
GAGTC	1																									1
GAGTT	4																									4
GATAA	6																									6
GATAC	2																									2
GATAT	3	2																								5
GATCC	1																									1
GATGA	2																									2
GATTA	5																									5
GATTC	2																									2
GATTG	8	1																								9
GATTT	9																									9
GCAAA	4																									4
GCAAC	1																									1
GCAAT	1																									1
GCATA	2																									2
GCATC	1																									1
GCCAA	1																									1
GCCAG	2																									2
GCCCA	1																									1
GCCTT	1																									1
GCGAC	1																									1
GCGTT			1																							1
GCTAT	1																									1
GCTGG	2																									2
GCTTA	2																									2
GCTTT		1																								1
GGAAA	5																									5
GGAAC	1																									1
GGAAG	2	2	1																							5
GGAAT	3																									3
GGACA	1																									1
GGACC	1																									1
GGAGA	4																									4
GGAGC	1																									1
GGATC	1	1																								2
GGATG	1																									1
GGATT	2	1																								3
GGCAA	1																									1
GGCCA	1																									1
GGCTG	1	1																								2
GGCTT	1	2	1																							4
GGGAA	3		1																							4
GGGAT	1																									1
GGGGA	1																									1
GGGGT	2																									2
GGGTA	1																									1
GGGTC	1																									1
GGGTT	27	4	1																							32
GGTAA	6																									6
GGTAC	4																									4
GGTAT	3																									3
GGTGG	1																									1
GGTTA	10	4																								14
GGTTC	1																									1
GGTTG	61	6																								67
GGTTT	6	2	1																							9
GTAAA	5																									5
GTAAC	3																									3
GTAAG	2																									2
GTAAT	2	1																								3
GTACA	2	1																								3
GTAGA	1																									1
GTATA	3																									3
GTATC	1																									1
GTATG	1			1																						2
GTATT	6																									6
GTCAA	2																									2
GTCAG	1																									1
GTCGC	1																									1
GTCGG	1																									1
GTCTC	1																									1
GTCTT	4	1																								5
GTGCA	1																									1
GTGGC	2																									2
GTGGG	2																									2
GTTAA	12	1																								13
GTTAG	9																									9
GTTAT	7	1																								8
GTTCG	1																									1
GTTGA	12	1																								13
GTTGC	2	1																								3
GTTGG	42	3																								45
GTTGT	1																									1
GTTTA	9																									9
GTTTC	1	1																								2
GTTTG	5																									5
GTTTT	13																									13
TAAAA	82	3																								85
TAAAC	14	2																								16
TAAAG	3																									3
TAAAT	40	2																								42
TAACA	5	1																								6
TAACC	35	3	1																							39
TAACG	3																									3
TAACT	9																									9
TAAGA	4																									4
TAAGG	4	2																								6
TAAGT	2																									2
TAATA	28	2																								30
TAATC	6																									6
TAATG	8																									8
TAATT	32																									32
TACAA	21																									21
TACAC	4																									4
TACAG	3																									3
TACAT	10																									10
TACCA	4																									4
TACCG	1	1																								2
TACCT	4	1																								5
TACGA	2																									2
TACGG	1																									1
TACTA	11	1																								12
TACTG	3																									3
TACTT	3																									3
TAGAA	10																									10
TAGAC	1																									1
TAGAG		1																								1
TAGAT	2																									2
TAGCA	1																									1
TAGGA	1																									1
TAGGC	1																									1
TAGGT	26																									26
TAGTA	4	1																								5
TAGTC	2																									2
TAGTG	5	1																								6
TAGTT	5																									5
TATAA	17	1																								18
TATAC	3																									3
TATAG	9		1																							10
TATAT	23	2																								25
TATCA	7																									7
TATCC	2																									2
TATCG	1																									1
TATCT	7																									7
TATGA	3	1																								4
TATGC	1																									1
TATGG	6	1																								7
TATGT	8																									8
TATTA	34																									34
TATTC	9																									9
TATTG	13	1																								14
TATTT	79																									79
TCAAA	7																									7
TCAAC	17																									17
TCAAG	4																									4
TCAAT	7	3																								10
TCACA	1																									1
TCACT	4																									4
TCAGA	3																									3
TCAGC	1																									1
TCAGT	1																									1
TCATA	10																									10
TCATT	5																									5
TCCAA	7																									7
TCCAC	1																									1
TCCAG	1	1																								2
TCCCA	2																									2
TCCCC	1																									1
TCCCT	2																									2
TCCGA	1																									1
TCCTA	2																									2
TCCTC	1																									1
TCCTT	2																									2
TCGAA	2																									2
TCGAG	1																									1
TCGCC	1																									1
TCGTA	1	1																								2
TCGTC	2																									2
TCGTG	2																									2
TCGTT	1																									1
TCTAA	8																									8
TCTAC	2																									2
TCTAG	4																									4
TCTAT	2																									2
TCTCA	4																									4
TCTCC	1	1																								2
TCTCT	4																									4
TCTGA	1																									1
TCTTA	7		1																							8
TCTTC	10	1																								11
TCTTG	2																									2
TCTTT	15																									15
TGAAA	21																									21
TGAAC		1																								1
TGAAG	3																									3
TGAAT	11																									11
TGACA	2																									2
TGACG	1																									1
TGACT	1																									1
TGAGA	1																									1
TGAGC	1																									1
TGAGG	1																									1
TGAGT	6																									6
TGATA	5																									5
TGATC	4																									4
TGATG	2																									2
TGATT	6																									6
TGCCA		1																								1
TGCCC	1																									1
TGCGT	2																									2
TGCTT	2																									2
TGGAC	2																									2
TGGAG	2																									2
TGGAT	1																									1
TGGCA	2																									2
TGGCC		1																								1
TGGCT		1																								1
TGGGA	2																									2
TGGGC	1																									1
TGGGT	12	1																								13
TGGTC	1																									1
TGGTT	5	2																								7
TGTAA	11	1	2																							14
TGTAC	2		1																							3
TGTAG	3	1																								4
TGTAT	8																									8
TGTCC	1																									1
TGTCT	1																									1
TGTGA	1																									1
TGTGT	2																									2
TGTTA	6	2																								8
TGTTC	2																									2
TGTTG	2																									2
TGTTT	10																									10
TTAAA	71	2																								73
TTAAC	6	2																								8
TTAAG	8																									8
TTAAT	38	1	1																							40
TTACA	16																									16
TTACG	2																									2
TTACT	8																									8
TTAGA	11																									11
TTAGC	2	1																								3
TTAGG	12	1	1																							14
TTAGT	6																									6
TTATA	18	1																								19
TTATC	9																									9
TTATG	10																									10
TTATT	51	2																								53
TTCAA	18	1																								19
TTCAC	2																									2
TTCAG	2		1																							3
TTCAT	6	1																								7
TTCCA	2	1																								3
TTCCC	4		1																							5
TTCCT	1																									1
TTCGA	1																									1
TTCGC	1																									1
TTCGG	1																									1
TTCGT	3																									3
TTCTA	8	2																								10
TTCTC	9																									9
TTCTG	2																									2
TTCTT	15																									15
TTGAA	16																									16
TTGAC	2																									2
TTGAG	9																									9
TTGAT	10																									10
TTGCA	2																									2
TTGCG	2																									2
TTGGA	17	2																								19
TTGGC	5		1																							6
TTGGG	65	6																								71
TTGGT	6	2																								8
TTGTA	14	2																								16
TTGTC	1																									1
TTGTG	4	1																								5
TTGTT	15																									15
TTTAA	59	5	1																							65
TTTAC	7	1																								8
TTTAG	16	1																								17
TTTAT	63																									63
TTTCA	13																									13
TTTCC	8																									8
TTTCG	3																									3
TTTCT	8																									8
TTTGA	7	1																								8
TTTGC	5	1																								6
TTTGG	5	4	1																							10
TTTGT	19	1																								20
TTTTA	64	4		1																						69
TTTTC	36		1																							37
TTTTG	22																									22
AAAAAT	3																									3
AAAACA	1																									1
AAAACC	1																									1
AAAACT	2																									2
AAAAGA	1																									1
AAAAGT	1																									1
AAAATA	4																									4
AAAATC	3																									3
AAAATT	2																									2
AAACTA	1																									1
AAACTT		1																								1
AAAGAA	1																									1
AAAGCC	1																									1
AAAGCT	1																									1
AAAGGA	1																									1
AAATAA	2																									2
AAATAC	1																									1
AAATCA	2																									2
AAATCC	1																									1
AAATGA	2																									2
AAATGC	1																									1
AAATGT	3		1																							4
AAATTA	2																									2
AAATTC	1																									1
AAATTT	1																									1
AACAAA	1																									1
AACACT	1																									1
AACATG			1																							1
AACATT	2																									2
AACCAT	1																									1
AACCCA	1																									1
AACCGT		1																								1
AACCTA	2																									2
AACGGA		1																								1
AACTAA	2																									2
AACTAC		1																								1
AACTGT	1																									1
AAGAAA	1																									1
AAGACG	1																									1
AAGATT	1	1																								2
AAGCTA	2																									2
AAGGAA		1																								1
AAGGAT	1																									1
AAGGGA	1	1	1																							3
AAGGGC	1																									1
AAGGTC	1																									1
AAGTGT	1																									1
AAGTTC	1																									1
AAGTTT	2																									2
AATAAA	3																									3
AATAAC	1																									1
AATACC	1																									1
AATATG		1																								1
AATATT	2																									2
AATCAA	1																									1
AATCGA	1																									1
AATCTA	1																									1
AATGAT	2																									2
AATGCT	3																									3
AATGTA		1																								1
AATGTT	3																									3
AATTAA	4																									4
AATTAC	1																									1
AATTAG	5																									5
AATTAT	1																									1
AATTGT	1																									1
AATTTT	3																									3
ACAAAA	2																									2
ACAACT	1																									1
ACAAGA	1																									1
ACAATT	1																									1
ACACTG	1																									1
ACAGAA	1																									1
ACAGCT	1																									1
ACAGTA	1																									1
ACATAG	2																									2
ACATAT	2																									2
ACATCA	1																									1
ACATCG	1																									1
ACATTA	1																									1
ACATTT	1																									1
ACCAAT	1																									1
ACCAGG	1																									1
ACCAGT	1																									1
ACCGCA	1																									1
ACCGTA	1																									1
ACCTAG	1																									1
ACCTTG	1																									1
ACGGCC	1																									1
ACGTAA	1	1																								2
ACGTAG	1																									1
ACTAAG	1																									1
ACTAAT	1																									1
ACTACC	1																									1
ACTAGA	1																									1
ACTAGC	1																									1
ACTAGT	1																									1
ACTATT	2																									2
ACTCTC	1																									1
ACTGAC		1																								1
ACTGAG	1																									1
ACTGGT	1																									1
ACTGTC	1																									1
ACTTAG	2																									2
ACTTGA	2																									2
ACTTTG	1																									1
AGAAAA	1																									1
AGAAAG	1																									1
AGAAAT	1																									1
AGAAGG	1																									1
AGAATT	1																									1
AGAGAA	1																									1
AGAGGA	2																									2
AGAGGG	1	2																								3
AGAGTA	1																									1
AGATTT		1																								1
AGCCTT	1																									1
AGCTGT		1																								1
AGCTTA	1																									1
AGGAAT	1																									1
AGGAGA	2																									2
AGGATA	1																									1
AGGCTT	1																									1
AGGGAG	4																									4
AGGGGG	1																									1
AGTAAA	2																									2
AGTAAC	1																									1
AGTAAT	1																									1
AGTACT	2																									2
AGTAGA	2																									2
AGTAGC	1																									1
AGTAGG	1																									1
AGTATT	2																									2
AGTCTC	1																									1
AGTGAT	2																									2
AGTGCT	1																									1
AGTTAC	1																									1
AGTTCA	2																									2
AGTTCC		1																								1
AGTTGA	1																									1
AGTTGT	1																									1
AGTTTT	1																									1
ATAAAA	5																									5
ATAATC	1																									1
ATAATT	1																									1
ATACAA	2																									2
ATACAT	1																									1
ATACCA	1																									1
ATACGA	1																									1
ATACTG	1																									1
ATACTT	1																									1
ATATCA	1	1																								2
ATATCT	1																									1
ATATTA	1																									1
ATATTC	1																									1
ATCAAA	1																									1
ATCAAC	1																									1
ATCAAT	1																									1
ATCAGT	1																									1
ATCATA	1																									1
ATCCCA	1																									1
ATCGTT	1																									1
ATCTAA	1																									1
ATCTCT	1																									1
ATCTGA	1																									1
ATGAAG	1																									1
ATGACA	1																									1
ATGACC	1																									1
ATGATA	1																									1
ATGATC	1																									1
ATGGCT	1																									1
ATGTAA	1																									1
ATGTAC	2																									2
ATGTAT	2																									2
ATGTCG	1	1																								2
ATGTTA	1																									1
ATTAAA	1																									1
ATTAAC	1																									1
ATTAAG	1																									1
ATTACA	1																									1
ATTACT	1																									1
ATTAGG	1																									1
ATTAGT	1	1																								2
ATTATA	1																									1
ATTCAA	2																									2
ATTCAT	1	1																								2
ATTGAA	2																									2
ATTGCT	1																									1
ATTGTT	1																									1
ATTTAA	2																									2
ATTTTA	2																									2
ATTTTT	1																									1
CAAAAA	1																									1
CAAAAC	1																									1
CAAAGA	1																									1
CAAATC	1																									1
CAAATT	2																									2
CAACCA	1																									1
CAAGAA	1																									1
CAAGTT	1																									1
CAATAC	1																									1
CAATCC	1																									1
CAATCT	1																									1
CACAAT	1																									1
CACATA	2																									2
CACCGA	1																									1
CACCGC	1																									1
CACGTT		1																								1
CACTAC	1																									1
CACTAT	1																									1
CACTTT	1																									1
CAGAGC	2																									2
CAGAGG	1																									1
CAGGTT	1																									1
CATAAA	1																									1
CATAAC	1	1																								2
CATAAG	1																									1
CATAGA	1																									1
CATGAA	1																									1
CATTAC	1																									1
CATTGC	1																									1
CATTTT	1																									1
CCAAAA	1																									1
CCAAAC	1																									1
CCAGTA	1																									1
CCATAA	1																									1
CCATGA	1																									1
CCATTA	1																									1
CCATTC	1																									1
CCCATT	1																									1
CCCTCC	1																									1
CCTAGA	1																									1
CCTATT	1																									1
CCTCTC		1																								1
CCTTTC	1																									1
CGAATA	1																									1
CGACAA	1																									1
CGACAT	1																									1
CGATAG	1																									1
CGATGC	1																									1
CGCCTA	1																									1
CGGAGG		1																								1
CGGCGT	1																									1
CTAAAA	1																									1
CTAACT	1																									1
CTATCA	1																									1
CTATTA	1																									1
CTCACA	1																									1
CTCAGT	1																									1
CTCTCC	1	1																								2
CTGAGA		1																								1
CTTAAA	1																									1
CTTAAC	1																									1
CTTCAA	2																									2
CTTCAC	1																									1
CTTCTA	1																									1
CTTCTC	1																									1
CTTCTG	1																									1
CTTGAA	1																									1
CTTGAC	1																									1
GAAAAA	3																									3
GAAAAG	1																									1
GAAACA	1																									1
GAAAGG	1																									1
GAAAGT	2																									2
GAAATG	1																									1
GAACAA	1																									1
GAACTT	1																									1
GAAGAT	3																									3
GAAGTT	1																									1
GAATAA	1																									1
GAATGA	1																									1
GAATTA	1																									1
GACAAA	1																									1
GACATC		1																								1
GACATG	1																									1
GACCTT	1																									1
GACGAA		1																								1
GACGGT	1																									1
GACTAT	1																									1
GACTCT	1																									1
GACTGA	1																									1
GACTGG	1																									1
GAGAAA	1																									1
GAGAGC	1																									1
GAGAGG	1	1																								2
GAGATA	1																									1
GAGGGA	1	1																								2
GAGGGG	1																									1
GAGTAA	1																									1
GATAGT	1																									1
GATCAA	1																									1
GATGAG	1																									1
GATGTA	1																									1
GATTGG	1																									1
GATTGT	1																									1
GCAACA	1																									1
GCAATA	1																									1
GCACAC	1																									1
GCACAT	1																									1
GCAGGA	1																									1
GCATTA	1																									1
GCATTG	1																									1
GCATTT	1																									1
GCCGAT	1																									1
GCCGCA	1																									1
GCGACG	1																									1
GCGTCG	1																									1
GCTAAC	1																									1
GCTACG	1																									1
GCTAGG	1																									1
GCTATG	1																									1
GCTATT	1																									1
GCTGTG	1																									1
GGAAAA	1																									1
GGAAAG			1																							1
GGAAGG	1																									1
GGAGAG	1	2																								3
GGAGGC	1																									1
GGATAC	1																									1
GGATGC	1																									1
GGGAAA	1																									1
GGGACT	1																									1
GGTAGG	1																									1
GGTAGT	1																									1
GGTCAT	2																									2
GGTCTA	1																									1
GGTGAC	1																									1
GGTTGT	1																									1
GTAAAA	1																									1
GTAAAT	1																									1
GTAACC	1																									1
GTACTA	1																									1
GTAGAA	1																									1
GTAGAC	1																									1
GTAGAG		1																								1
GTAGCT		1																								1
GTATAT	1																									1
GTATCG	1																									1
GTATGT	1																									1
GTATTA	1																									1
GTCAAT	1																									1
GTCAGG	1																									1
GTCAGT	1																									1
GTCTAA	1																									1
GTGAAA	1																									1
GTTAAA	1																									1
GTTACT	1																									1
GTTAGG	1																									1
GTTATT	1																									1
GTTCAT	1																									1
GTTCTA	1																									1
GTTGTC	1																									1
GTTTAG	1																									1
GTTTAT	1																									1
GTTTTG	1																									1
TAAAAA	11																									11
TAAAGA	1																									1
TAAAGC	1																									1
TAAATT	1																									1
TAACAA	1																									1
TAACAT			1																							1
TAACCA	2																									2
TAAGCT	1																									1
TAATAT	1																									1
TAATGA	1																									1
TAATTG	1																									1
TAATTT	2																									2
TACAAA	1																									1
TACAAC	2																									2
TACAAT	1																									1
TACACA	1																									1
TACACC	1																									1
TACATA	1																									1
TACCAA	1																									1
TACCTT	1																									1
TACGTA		1																								1
TACGTC	1																									1
TACGTT	2	1																								3
TAGAAG	1																									1
TAGCAT	1																									1
TAGGAA	1																									1
TAGGAT		1																								1
TAGGTA	1																									1
TAGGTG	1																									1
TAGTAC	1																									1
TAGTAT	1																									1
TAGTGA	1																									1
TAGTTC	1																									1
TATAAA	1																									1
TATAAG	1																									1
TATAAT	2																									2
TATACG	1																									1
TATATC	2																									2
TATATT	1																									1
TATCAA	2																									2
TATCAG	3																									3
TATCCT	1																									1
TATCTC	1																									1
TATCTT	1																									1
TATGTA	1																									1
TATGTG	1																									1
TATTAG	1																									1
TATTGG	1																									1
TATTTA	2																									2
TATTTC	1																									1
TATTTT	2																									2
TCAAAA	2																									2
TCAATA	1																									1
TCAGAA	1																									1
TCAGTC	1																									1
TCATTT	2																									2
TCCAAA	1																									1
TCCCCC	1																									1
TCCCTC	1																									1
TCCGTA	1																									1
TCCGTC		1																								1
TCCTGT	1																									1
TCTAAA	3																									3
TCTAAT		1																								1
TCTAGA	1																									1
TCTAGT	1																									1
TCTCCC	1																									1
TCTCCG	1																									1
TCTCTA	1																									1
TCTGAT	1																									1
TCTGTA	1																									1
TCTTAC	1																									1
TCTTGA	2																									2
TCTTTC	1																									1
TGAAAA	2																									2
TGAAAT	1																									1
TGAACC	1																									1
TGAAGA	2																									2
TGAATA	2																									2
TGAATT	1																									1
TGACCA	1																									1
TGACTT	1																									1
TGATAT		1																								1
TGATTT	3																									3
TGCAGT	1																									1
TGCATC	1																									1
TGGATA	1																									1
TGGGAT	1																									1
TGGGGG	1																									1
TGGTAC	1																									1
TGGTAT	1																									1
TGTAAG	2																									2
TGTAAT	2																									2
TGTAGG	1																									1
TGTATA	2																									2
TGTATG	1																									1
TGTCAA	1	1																								2
TGTCAT		1																								1
TGTCGC	1																									1
TGTTAC	1																									1
TGTTAG	1																									1
TGTTCA	1																									1
TGTTTC	1																									1
TTAAAG	1																									1
TTAACA	1																									1
TTAAGT	1																									1
TTAATA	2																									2
TTAATG	1																									1
TTAATT	6																									6
TTACAA	3																									3
TTACAG	3																									3
TTACAT	3																									3
TTACCA	1																									1
TTACGA	1																									1
TTACGT	1																									1
TTAGAT	1																									1
TTAGCG	1																									1
TTAGGA	1																									1
TTAGTT	1																									1
TTATAA	1																									1
TTATAT	1																									1
TTATTT	2																									2
TTCAAA	1																									1
TTCAAG	1																									1
TTCACC	1																									1
TTCACG			1																							1
TTCATC	1																									1
TTCCAG		1																								1
TTCCAT	2																									2
TTCCTC	1																									1
TTCGTT	1																									1
TTCTAC	1																									1
TTCTAT	1																									1
TTCTCG	1																									1
TTCTTA	1																									1
TTGAAA	2																									2
TTGAAC	2																									2
TTGAAT	2																									2
TTGACC	2																									2
TTGATT	2																									2
TTGGAA	1																									1
TTGGTA	1																									1
TTGGTG	1																									1
TTGTAA	1																									1
TTGTAC	1																									1
TTGTAG	1																									1
TTGTCG	1																									1
TTTAAA	3																									3
TTTAAC	1	1																								2
TTTAAG	2																									2
TTTACA	2																									2
TTTAGG	2																									2
TTTATA	3																									3
TTTATC	1																									1
TTTATT	5																									5
TTTCAA	1																									1
TTTCAG	2																									2
TTTCCA	1																									1
TTTCCT	2																									2
TTTCTA	2																									2
TTTCTC	1																									1
TTTCTG	1																									1
TTTCTT	1																									1
TTTGAA	3	1																								4
TTTGAG	1																									1
TTTGTT	1																									1
TTTTAA	3																									3
TTTTAC	1																									1
TTTTAT	3																									3
TTTTCA	1																									1
TTTTCC	1																									1
TTTTCG	1																									1
TTTTCT	2																									2
TTTTGA	2																									2
TTTTTA	6																									6
TTTTTC	1																									1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	20	17	8	8	7		3	2	65
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1		1	2	1	2		8
AC/GT	-	-	-	381	172	84	47	34	11	7	3															739
AG/CT	-	-	-	873	493	356	264	176	108	44	16	3														2333
AT/AT	-	-	-	1189	610	434	282	217	112	68	21															2933
CG/CG	-	-	-	16	4			1																		21
AAC/GTT	-	-	88	20	3	2																				113
AAG/CTT	-	-	278	52	7	4	1	1																		343
AAT/ATT	-	-	1228	243	67	8	2																			1548
ACC/GGT	-	-	23	2	1																					26
ACG/CGT	-	-	23	6	1		1																			31
ACT/AGT	-	-	100	35	9	2	1																			147
AGC/CTG	-	-	17	2	1																					20
AGG/CCT	-	-	67	10	1	1																				79
ATC/ATG	-	-	96	21	5	1																				123
CCG/CGG	-	-	16	3																						19
AAAC/GTTT	-	38	7	1																						46
AAAG/CTTT	-	83	1	1	2																					87
AAAT/ATTT	-	415	28	1	1																					445
AACC/GGTT	-	10	3	1																						14
AACG/CGTT	-	3																								3
AACT/AGTT	-	29	4	3	1																					37
AAGC/CTTG	-	2	1																							3
AAGG/CCTT	-	28	4	1																						33
AAGT/ACTT	-	45	9	2																						56
AATC/ATTG	-	39	5																							44
AATG/ATTC	-	36	3																							39
AATT/AATT	-	161	7																							168
ACAG/CTGT	-	9	1																							10
ACAT/ATGT	-	221	25	1																						247
ACCG/CGGT	-		1	1																						2
ACCT/AGGT	-	9		1		1																				11
ACGC/CGTG	-	3																								3
ACGG/CCGT	-	3																								3
ACGT/ACGT	-	1	1																							2
ACTC/AGTG	-	4	1																							5
ACTG/AGTC	-	2																								2
AGAT/ATCT	-	42	5		1																					48
AGCG/CGCT	-	1																								1
AGCT/AGCT	-	2																								2
AGGC/CCTG	-	1																								1
AGGG/CCCT	-	7																								7
ATCC/ATGG	-	11		1																						12
ATCG/ATCG	-	2																								2
AAAAC/GTTTT	176	8																								184
AAAAG/CTTTT	282	4	1																							287
AAAAT/ATTTT	815	25		1																						841
AAACC/GGTTT	86	24	5																							115
AAACG/CGTTT	15	3																								18
AAACT/AGTTT	100	9	2																							111
AAAGC/CTTTG	17	2	1	1																						21
AAAGG/CCTTT	46	3																								49
AAAGT/ACTTT	66	3																								69
AAATC/ATTTG	82	2																								84
AAATG/ATTTC	107	5																								112
AAATT/AATTT	525	21	2																							548
AACAC/GTGTT	23	3																								26
AACAG/CTGTT	14	2																								16
AACAT/ATGTT	71	5	1																							77
AACCC/GGGTT	537	46	7																							590
AACCG/CGGTT	12																									12
AACCT/AGGTT	142	12	3																							157
AACGC/CGTTG	16	2	1																							19
AACGG/CCGTT	2																									2
AACGT/ACGTT	12	2																								14
AACTC/AGTTG	86	3																								89
AACTG/AGTTC	18	1	1																							20
AACTT/AAGTT	67	6																								73
AAGAC/CTTGT	15	3																								18
AAGAG/CTCTT	51	4	2																							57
AAGAT/ATCTT	56		1																							57
AAGCC/CTTGG	21	6	4																							31
AAGCG/CGCTT	1																									1
AAGCT/AGCTT	11	2																								13
AAGGC/CCTTG	3																									3
AAGGG/CCCTT	20	4	3																							27
AAGGT/ACCTT	24	4																								28
AAGTC/ACTTG	21	1																								22
AAGTG/ACTTC	16																									16
AATAC/ATTGT	135	9																								144
AATAG/ATTCT	76	5																								81
AATAT/ATATT	245	10																								255
AATCC/ATTGG	115	10	1																							126
AATCG/ATTCG	12																									12
AATCT/AGATT	60	3	1																							64
AATGC/ATTGC	11	2																								13
AATGG/ATTCC	20	2																								22
AATGT/ACATT	93	3	2																							98
AATTC/AATTG	112	7	1																							120
ACACC/GGTGT	1																									1
ACACG/CGTGT	2																									2
ACACT/AGTGT	13	2																								15
ACAGC/CTGTG	2																									2
ACAGG/CCTGT	5																									5
ACAGT/ACTGT	20	1	2																							23
ACATC/ATGTG	14																									14
ACATG/ATGTC	13																									13
ACCAG/CTGGT	4																									4
ACCAT/ATGGT	32	3	1	1																						37
ACCCC/GGGGT	8																									8
ACCCG/CGGGT	4																									4
ACCCT/AGGGT	4																									4
ACCGG/CCGGT	3																									3
ACCGT/ACGGT	6	1																								7
ACCTC/AGGTG	5																									5
ACCTG/AGGTC	2																									2
ACGAG/CGTCT	3																									3
ACGAT/ATCGT	14	1																								15
ACGCC/CGTGG	4																									4
ACGCG/CGCGT	6																									6
ACGCT/AGCGT	2																									2
ACGGC/CCGTG	1																									1
ACGGG/CCCGT	3	1																								4
ACGTC/ACGTG	4																									4
ACTAG/AGTCT	10	2																								12
ACTAT/AGTAT	52	6	2	1																						61
ACTCC/AGTGG	4																									4
ACTCG/AGTCG	6																									6
ACTCT/AGAGT	8	3		1																						12
ACTGC/AGTGC	3	1																								4
ACTGG/AGTCC	6	1																								7
AGAGC/CTCTG	6																									6
AGAGG/CCTCT	11	2																								13
AGATC/ATCTG	12																									12
AGATG/ATCTC	13																									13
AGCAT/ATGCT	7																									7
AGCCC/CTGGG	8	2																								10
AGCCG/CGGCT	1																									1
AGCCT/AGGCT	1																									1
AGCGG/CCGCT	1																									1
AGCTC/AGCTG	2																									2
AGGAT/ATCCT	18	1																								19
AGGCC/CCTGG	3	1		1																						5
AGGCG/CCTCG	3																									3
AGGGC/CCCTG	4																									4
AGGGG/CCCCT	12																									12
ATATC/ATATG	67	4																								71
ATCCC/ATGGG	8	1																								9
ATCCG/ATCGG	6	1																								7
ATCGC/ATGCG	1																									1
ATGCC/ATGGC	4	1																								5
CCCCG/CGGGG	1																									1
AAAAAC/GTTTTT	6																									6
AAAAAG/CTTTTT	11																									11
AAAAAT/ATTTTT	47																									47
AAAACC/GGTTTT	4																									4
AAAACG/CGTTTT	2																									2
AAAACT/AGTTTT	8																									8
AAAAGG/CCTTTT	6	1																								7
AAAAGT/ACTTTT	5																									5
AAAATC/ATTTTG	16																									16
AAAATG/ATTTTC	8																									8
AAAATT/AATTTT	25																									25
AAACAG/CTGTTT	4																									4
AAACAT/ATGTTT	2																									2
AAACCC/GGGTTT	2																									2
AAACCT/AGGTTT	5																									5
AAACGG/CCGTTT		1																								1
AAACGT/ACGTTT	4	2																								6
AAACTC/AGTTTG	1																									1
AAACTG/AGTTTC	2																									2
AAACTT/AAGTTT	6	1																								7
AAAGAC/CTTTGT	2																									2
AAAGAG/CTCTTT	5																									5
AAAGAT/ATCTTT	3																									3
AAAGCC/CTTTGG	1																									1
AAAGCT/AGCTTT	4																									4
AAAGGG/CCCTTT	4	1	2																							7
AAAGGT/ACCTTT	1																									1
AAAGTC/ACTTTG	2																									2
AAAGTG/ACTTTC	4																									4
AAAGTT/AACTTT	3	1																								4
AAATAC/ATTTGT	4																									4
AAATAG/ATTTCT	5																									5
AAATAT/ATATTT	8																									8
AAATCC/ATTTGG	3																									3
AAATCG/ATTTCG	1																									1
AAATCT/AGATTT	6	1																								7
AAATGC/ATTTGC	2																									2
AAATGG/ATTTCC	4																									4
AAATGT/ACATTT	11	1	1																							13
AAATTC/AATTTG	12	1																								13
AAATTG/AATTTC	6																									6
AAATTT/AAATTT	7																									7
AACAAG/CTTGTT	3																									3
AACAAT/ATTGTT	4																									4
AACACC/GGTGTT	1																									1
AACACT/AGTGTT	2																									2
AACAGC/CTGTTG	1																									1
AACAGG/CCTGTT	1																									1
AACAGT/ACTGTT	4																									4
AACATC/ATGTTG	2																									2
AACATG/ATGTTC	3		1																							4
AACATT/AATGTT	10		1																							11
AACCAC/GGTTGT	2																									2
AACCAT/ATGGTT	5	1																								6
AACCCT/AGGGTT	1																									1
AACCGC/CGGTTG	1																									1
AACCGT/ACGGTT	2	1																								3
AACCTG/AGGTTC	2																									2
AACCTT/AAGGTT	1																									1
AACGAC/CGTTGT	3																									3
AACGAG/CGTTCT	1																									1
AACGAT/ATCGTT	1																									1
AACGCT/AGCGTT	2																									2
AACGTG/ACGTTC		1	1																							2
AACTAC/AGTTGT	5	1																								6
AACTAG/AGTTCT	4																									4
AACTCT/AGAGTT	1																									1
AACTGC/AGTTGC	1																									1
AACTGG/AGTTCC		2																								2
AACTGT/ACAGTT	5																									5
AACTTC/AAGTTG	4																									4
AACTTG/AAGTTC	11																									11
AAGAAT/ATTCTT	2																									2
AAGACG/CGTCTT	1	1																								2
AAGACT/AGTCTT	1																									1
AAGAGG/CCTCTT	3																									3
AAGAGT/ACTCTT	3																									3
AAGATC/ATCTTG	3																									3
AAGATG/ATCTTC	7																									7
AAGATT/AATCTT	2	1																								3
AAGCAG/CTGCTT	1																									1
AAGCAT/ATGCTT	1																									1
AAGCCT/AGGCTT	1																									1
AAGCTT/AAGCTT	2																									2
AAGGAG/CCTTCT	4																									4
AAGGAT/ATCCTT	3																									3
AAGGCT/AGCCTT	1																									1
AAGGGC/CCCTTG	1																									1
AAGGGG/CCCCTT	1																									1
AAGGTC/ACCTTG	6																									6
AAGGTG/ACCTTC	2																									2
AAGTAC/ACTTGT	1																									1
AAGTAG/ACTTCT	6																									6
AAGTAT/ACTTAT	2																									2
AAGTCT/ACTTAG	3																									3
AAGTGT/ACACTT	3																									3
AATACC/ATTGGT	8																									8
AATACG/ATTCGT	2																									2
AATACT/AGTATT	7	1																								8
AATAGC/ATTGCT	3																									3
AATAGG/ATTCCT	3																									3
AATAGT/ACTATT	5																									5
AATATC/ATATTG	5	2																								7
AATATG/ATATTC	4	2																								6
AATATT/AATATT	6																									6
AATCAC/ATTGTG	2																									2
AATCAG/ATTCTG	2																									2
AATCAT/ATGATT	2																									2
AATCCC/ATTGGG	4																									4
AATCCT/AGGATT	2	1																								3
AATCGT/ACGATT	1																									1
AATCTC/AGATTG	1																									1
AATCTG/AGATTC	1																									1
AATGAC/ATTGTC	1	1																								2
AATGAG/ATTCTC	1																									1
AATGAT/ATCATT	4																									4
AATGCC/ATTGGC	1																									1
AATGCT/AGCATT	5																									5
AATGGC/ATTGCC	1																									1
AATGGG/ATTCCC	2																									2
AATGGT/ACCATT	3																									3
AATGTC/ACATTG	2	1																								3
AATTAC/AATTGT	12																									12
AATTAG/AATTCT	7	1																								8
AATTAT/AATTAT	6																									6
AATTCC/AATTGG	1																									1
ACACAT/ATGTGT	6																									6
ACACCG/CGGTGT	1																									1
ACACCT/AGGTGT	3																									3
ACACGC/CGTGTG	1																									1
ACACTC/AGTGTG	1																									1
ACACTG/AGTGTC	2	1																								3
ACAGAT/ATCTGT	1																									1
ACAGCC/CTGTGG	1																									1
ACAGCG/CGCTGT	1																									1
ACAGCT/AGCTGT	1	2																								3
ACAGTG/ACTGTC	1																									1
ACATAG/ATGTCT	3																									3
ACATAT/ATATGT	10																									10
ACATCG/ATGTCG	3	2																								5
ACATCT/AGATGT	1																									1
ACATGC/ATGTGC	1																									1
ACATGG/ATGTCC	1																									1
ACATGT/ACATGT	2																									2
ACCACT/AGTGGT	3																									3
ACCAGG/CCTGGT	1																									1
ACCAGT/ACTGGT	4																									4
ACCATG/ATGGTC	5																									5
ACCCCC/GGGGGT	1																									1
ACCCCT/AGGGGT	1																									1
ACCCTG/AGGGTC	1																									1
ACCGAT/ATCGGT	1																									1
ACCGCC/CGGTGG	1																									1
ACCGTC/ACGGTG	2																									2
ACCTAG/AGGTCT	3																									3
ACCTAT/AGGTAT	1																									1
ACCTCT/AGAGGT		1																								1
ACGCCG/CGGCGT	2																									2
ACGCCT/AGGCGT	1																									1
ACGGAG/CCGTCT	1	1																								2
ACGGAT/ATCCGT	2																									2
ACGGCC/CCGTGG	1																									1
ACGGCG/CCGTCG	1																									1
ACGGCT/AGCCGT	1																									1
ACGTAG/ACGTCT	3																									3
ACGTAT/ACGTAT	1	1																								2
ACTAGC/AGTGCT	2																									2
ACTAGT/ACTAGT	5																									5
ACTATC/AGTGAT	6																									6
ACTATG/AGTCAT	1																									1
ACTCCT/AGGAGT	1																									1
ACTCTC/AGAGTG	1																									1
ACTCTG/AGAGTC	1																									1
ACTGAG/AGTCTC	5	1																								6
ACTGAT/AGTATC	5																									5
ACTGCT/AGCAGT	1																									1
ACTGGG/AGTCCC	2																									2
AGAGAT/ATCTCT	4																									4
AGAGCC/CTCTGG	2																									2
AGAGCG/CGCTCT	1																									1
AGAGGC/CCTCTG	1																									1
AGAGGG/CCCTCT	11	8																								19
AGATAT/ATATCT	3																									3
AGATCT/AGATCT	1																									1
AGATGC/ATCTGC	1																									1
AGCAGG/CCTGCT	1																									1
AGCCAT/ATGGCT	2																									2
AGCCCT/AGGGCT	1																									1
AGCCGC/CGGCTG	1																									1
AGCGAT/ATCGCT	1																									1
AGGATG/ATCCTC	1																									1
AGGCGG/CCGCCT	1	1																								2
AGGGGG/CCCCCT	4																									4
ATATCC/ATATGG	1																									1
ATCATG/ATCATG	1																									1
ATCCGC/ATGCGG	1																									1
ATCGGC/ATGCCG	2																									2
