Specifications
==============

Sequence source file: "/srv/lustre01/project/qmm_mm_pet-j9cm8n271e4/shared/webserver/new-megassr-v5/results/6ae335447dd98/fasta/6ae335447dd98_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              2
Total size of examined sequences (bp):           2635695
Total number of identified SSRs:                 8
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    0


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
2	3
3	1
5	1
6	3

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	total
TA	-	-	-	2					1	3
GTT	-	-	1							1
GGCAT	1									1
AAAGAC	1									1
TAAAAT	1									1
TCCAAA	1									1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	total
AT/AT	-	-	-	2					1	3
AAC/GTT	-	-	1							1
ATGCC/ATGGC	1									1
AAAATT/AATTTT	1									1
AAAGAC/CTTTGT	1									1
AAATCC/ATTTGG	1									1
