Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-44/megassr/results/hub_GCF_006265105.1/fasta/hub_GCF_006265105.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              2
Total size of examined sequences (bp):           1203800
Total number of identified SSRs:                 19
Number of SSR containing sequences:              2
Number of sequences containing more than 1 SSR:  2
Number of SSRs present in compound formation:    0


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
2	6
3	1
5	7
6	5

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	total
AT	-	-	-						2	2
TA	-	-	-	1		1		2		4
TTA	-	-		1						1
AAATA	1									1
ATATA	1									1
ATTTT	1									1
CTTTT	1									1
TAAAA	1									1
TATTA	1									1
TTTAA	1									1
AATAGT	1									1
ATAATT	1									1
ATCTTT	1									1
TCTTTT	1									1
TTTAAG	1									1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	total
AT/AT	-	-	-	1		1		2	2	6
AAT/ATT	-	-		1						1
AAAAG/CTTTT	1									1
AAAAT/ATTTT	3									3
AAATT/AATTT	1									1
AATAT/ATATT	2									2
AAAAAG/CTTTTT	1									1
AAACTT/AAGTTT	1									1
AAAGAT/ATCTTT	1									1
AATAGT/ACTATT	1									1
AATTAT/AATTAT	1									1
