Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCF_000240725.1/fasta/hub_GCF_000240725.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1883
Total size of examined sequences (bp):           33986952
Total number of identified SSRs:                 5545
Number of SSR containing sequences:              1223
Number of sequences containing more than 1 SSR:  936
Number of SSRs present in compound formation:    716


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	5
2	383
3	1787
4	2668
5	256
6	446

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	total
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1		1																																		2
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1																																					1
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-			1		1																																	2
AC	-	-	-	7	2	1	1			1	2					1								1																															16
AG	-	-	-	24	8	3	3	2	1					1												1																													43
AT	-	-	-	24	20	12	11	3	1	2	2																																												75
CA	-	-	-	18	4	1		1		2			2																																										28
CG	-	-	-	3	1																																																		4
CT	-	-	-	25	9	4	6	1	1		1															1																													48
GA	-	-	-	13	8	6	3	2	1				1	1				1																																					36
GT	-	-	-	12	4																																																		16
TA	-	-	-	22	13	10	4	4	1	4																																													58
TC	-	-	-	26	11		2	2	1											1																																			43
TG	-	-	-	9	2	5																																																	16
AAC	-	-	1	1	1	1	1		1						1																																								7
AAG	-	-	11	4	2	1	2																																																20
AAT	-	-		1																																																			1
ACA	-	-	8		1	2	3		1	1		1																														1													18
ACC	-	-	2	1	1			1																																															5
ACG	-	-	1			1																																																	2
AGA	-	-	7	3	2	3							2																																										17
AGC	-	-	13	1	2			1		2																																													19
AGG	-	-	58	21	19	6	4	6	3		2	1		2						1																																			123
ATA	-	-	3																																																				3
ATC	-	-		1	1			1								1																																							4
ATG	-	-	3	2																																																			5
ATT	-	-	1			1																																																	2
CAA	-	-	9	1	6	1	1	1			2	1				1		1				1																																	25
CAC	-	-	3				1																																																4
CAG	-	-	24	6	5	1	3	1	1	1		3	1			1																																							47
CAT	-	-	6	2	4																																																		12
CCA	-	-	6		1	2																																																	9
CCG	-	-	2	2	1																																																		5
CCT	-	-	83	43	29	12	10	8	8	3	3	3		1	1				1		1																																		206
CGC	-	-	2	1																																																			3
CGG	-	-	2	1	3	1																																																	7
CGT	-	-	1																																																				1
CTA	-	-							1																																														1
CTC	-	-	61	30	14	10	7	3	5		1	2	1	1		1			1			1																																	138
CTG	-	-	10	3	2	1	1	1	1																																														19
CTT	-	-	9	3	3	1	2																																																18
GAA	-	-	6	2	4	2																																																	14
GAC	-	-	1	1																																																			2
GAG	-	-	107	50	32	25	23	6	16	8	4	7												1																															279
GAT	-	-	1	2	1	1																1																																	6
GCA	-	-	13	4	5	5	1		1				1																																										30
GCC	-	-	7	1																																																			8
GCG	-	-	5		2																																																		7
GCT	-	-	9	3	3	4																																																	19
GGA	-	-	111	61	27	21	17	10	4	2	3	1	1	1			1		1																																				261
GGC	-	-	10		1	1																																																	12
GGT	-	-	5	3	1		1																																																10
GTC	-	-	1																																																				1
GTG	-	-	3	1	1	1																																																	6
GTT	-	-	6	1	2				1			2				1					1																																	1	15
TAA	-	-		1	1				1																																														3
TAC	-	-		1	1																																																		2
TAT	-	-	1	2																																																			3
TCA	-	-	2	2	2			1																																															7
TCC	-	-	100	57	26	17	11	14	11	4	3	1		3	1								1	1																															250
TCG	-	-	2			1																																																	3
TCT	-	-	10	9	3		1				1			1																																									25
TGA	-	-	2	3			1																																																6
TGC	-	-	15	10	1	3	1		2	1			1				1																																						35
TGG	-	-	3	3				1																																															7
TGT	-	-	9	7	4	2	2	1							1	1																																							27
TTA	-	-	2								1																																												3
TTC	-	-	6	2	2	2		2	1		2																																												17
TTG	-	-	2	1									1			1	1		1					1																															8
AAAC	-		1																																																				1
AACA	-	2																																																					2
AAGG	-	5		2																																																			7
ACAT	-		1																																																				1
ACTC	-	1					1																																																2
AGGA	-	10		1	1	1																																																	13
AGGG	-	151	94	55	36	7	9	7	1			1																																											361
AGGT	-				1																																																		1
AGTG	-		1																																																				1
ATAG	-	1																																																					1
ATCC	-	1																																																					1
ATCT	-	1		1	1																																																		3
ATTC	-	1	1																																																				2
ATTT	-		1																																																				1
CACG	-	1																																																					1
CCCT	-	171	78	46	23	10	4	4	2			1		1																																									340
CCTC	-	173	73	60	21	13	2	2		1		1																																											346
CCTT	-	5																																																					5
CTAC	-	1	1																																																				2
CTAT	-		2	1																																																			3
CTCA	-	3																																																					3
CTCC	-	114	56	26	22	7	1	4		1																																													231
CTTC	-	6		1																																																			7
CTTT	-	3																																																					3
GAAG	-		1																																																				1
GACA	-								1																																														1
GACC	-		1																																																				1
GAGG	-	134	81	42	24	14	6	3			1																																												305
GATT	-	1																																																					1
GCCC	-	1																																																					1
GGAA	-	5	1																																																				6
GGAG	-	196	98	51	32	18	2	3	3		1																																												404
GGAT	-	1																																																					1
GGGA	-	134	57	40	20	7	4	3																																															265
GGGC	-		1																																																				1
GGGT	-	1																																																					1
GGTC	-				1																																																		1
GTGA	-	1																																																					1
TACA	-	1																																																					1
TAGC	-	1																																																					1
TAGG	-		1	1																																																			2
TATC	-	1			1																																																		2
TATG	-	1																																																					1
TCAA	-	1																																																					1
TCAC	-											1																																											1
TCCC	-	142	69	56	33	9	3	3	1																																														316
TCCT	-	5			1																																																		6
TCTA	-					1																																																	1
TGAG	-					1																																																	1
TGTA	-	1																																																					1
TGTC	-	1	1																																																				2
TTCC	-	2		1																																																			3
TTGA	-	1																																																					1
AAAAC	1																																																						1
AAAAG	3																																																						3
AAAAT	2																																																						2
AAACA	1																																																						1
AAAGA	1																																																						1
AAAGC	1																																																						1
AAAGG	2																																																						2
AAGAA	2																																																						2
AAGGA	3																																																						3
AAGGG	2																																																						2
AATAA	1																																																						1
AATAC	2																																																						2
AATGA	1																																																						1
AATTA	1																																																						1
AATTT	1																																																						1
ACAAC	1																																																						1
ACAAG	1																																																						1
AGAAA	3																																																						3
AGAAG	1																																																						1
AGAGG	1																																																						1
AGATG	1																																																						1
AGGAA	1																																																						1
AGGAG	4																																																						4
AGGGA	3																																																						3
AGGGG	3	1																																																					4
AGTTG		1																																																					1
ATTTT	1																																																						1
CACTT	1																																																						1
CATGG		1																																																					1
CCCCA	1																																																						1
CCCCG	3																																																						3
CCCCT	11																																																						11
CCCGG	1																																																						1
CCCTC	6	2						1																																															9
CCCTT	2																																																						2
CCGAT	2																																																						2
CCGGG	1																																																						1
CCTCC	9	1																																																					10
CCTCT	2																																																						2
CCTGC	1																																																						1
CCTTC	2																																																						2
CCTTT	1																																																						1
CGACC	1																																																						1
CGGAT	3																																																						3
CGGCA		1																																																					1
CGGGG	1																																																						1
CGTCC	1																																																						1
CTACA	1																																																						1
CTCAC	1																																																						1
CTCCC	6																																																						6
CTCCT	1																																																						1
CTCGG	1																																																						1
CTCTT	2																																																						2
CTGTC	1																																																						1
CTTCC	1																																																						1
CTTCG	3																																																						3
CTTCT	1																																																						1
CTTGC	1																																																						1
CTTTC	2			1																																																			3
CTTTT	5																																																						5
GAAAA	4																																																						4
GAAAG	2																																																						2
GAAGA	3																																																						3
GAAGG	1																																																						1
GACAC	1																																																						1
GAGAA	1																																																						1
GAGGA	1																																																						1
GAGGG	4																																																						4
GATCG	1	1																																																					2
GCAAG	2																																																						2
GCAGG	2																																																						2
GCCCC	2																																																						2
GCCGA	3																																																						3
GCGAG	1																																																						1
GCGGC	2																																																						2
GGAAA	2																																																						2
GGAAG	5																																																						5
GGAGA	1																																																						1
GGAGG	8																																																						8
GGATC	1																																																						1
GGCAC	2																																																						2
GGGAA	1	1																																																					2
GGGAG	15	3	1																																																				19
GGGGA	6																																																						6
GTAGG	1																																																						1
GTCTT	1																																																						1
GTGAG	1																																																						1
GTTTT	1																																																						1
TAATA		1																																																					1
TATAT	1																																																						1
TATTT		1																																																					1
TCAAT	2																																																						2
TCCAC	1																																																						1
TCCCC	2	1																																																					3
TCCCT	2																																																						2
TCCGA	1																																																						1
TCCTC	1																																																						1
TCCTT	1																																																						1
TCGAT	1																																																						1
TCGGC	1																																																						1
TCTCC	1																																																						1
TCTTC	1																																																						1
TCTTT	2																																																						2
TGAAA	1																																																						1
TGACA	1																																																						1
TGGCA	1																																																						1
TGGGG	1																																																						1
TGTTG	1																																																						1
TGTTT					1																																																		1
TTATA		1																																																					1
TTCCC	1																																																						1
TTCCT	3																																																						3
TTCTT	4																																																						4
TTGTC	1																																																						1
TTTAT	3																																																						3
TTTCG	1																																																						1
TTTTA	1																																																						1
TTTTC	4																																																						4
TTTTG	2																																																						2
AAAAAC	2																																																						2
AAAGGA	1																																																						1
AACAGC	1	1																																																					2
AACCCT	6																																																						6
AAGCAC	1																																																						1
AAGGAG			1																																																				1
AATTCA	1																																																						1
AATTTG	1																																																						1
ACAACC	1																																																						1
ACATAC	1																																																						1
ACCCCC	1																																																						1
ACCCTA	8	1	1				1																																																11
ACGTGC	1																																																						1
AGAAAA	2																																																						2
AGAAGG	2	1																																																					3
AGAGGA	3																																																						3
AGCCGA	1																																																						1
AGCCTG																1																																							1
AGGAAG	1																																																						1
AGGACG	1																																																						1
AGGAGA		2		1																																																			3
AGGCTC													1																																										1
AGGGAA	2																																																						2
AGGGAG	1																																																						1
AGGGCA		1																																																					1
AGGGCT		1																																																					1
AGGGGG	1																																																						1
AGGGTA	1																																																						1
AGGGTT	2	1	1						1		1	1																																											7
ATCAGA	1																																																						1
ATGAGG				1																																																			1
ATTGAA		1																																																					1
CAACAC		1																																																					1
CAACAG	3	1																																																					4
CACCCT	1																																																						1
CACCTT	2																																																						2
CACGAG	1																																																						1
CACTGC	1																																																						1
CAGCAA	3	3	1																																																				7
CAGCAC	1																																																						1
CAGGAA		1																																																					1
CATCAG	1																																																						1
CATCCT	1																																																						1
CATTAT	2																																																						2
CCACAA		1																																																					1
CCACCT				1																																																			1
CCCCCG	1																																																						1
CCCCCT	1	1																																																					2
CCCCTC	8																																																						8
CCCCTG		1																																																					1
CCCTAA	4	1	1	1	1	2									1																																								11
CCCTCC	6	3																																																					9
CCCTTG		1																																																					1
CCGCCT	2																																																						2
CCTAAC	3	2	1				1																																																7
CCTCAT				2																																																			2
CCTCCC	5			1																																																			6
CCTCGA		1																																																					1
CCTCGT	1	1																																																					2
CCTCTT		1																																																					1
CCTGGT	1																																																						1
CGAAAC		1																																																					1
CGAGGA	2																																																						2
CGCCCT	1																																																						1
CGCGGA	1																																																						1
CGCGGG	2																																																						2
CGGCGA	1																																																						1
CGGCTG	1																																																						1
CGGGGC	1																																																						1
CGGTGG		1																																																					1
CGTCCT		1																																																					1
CGTCGC	1																																																						1
CTAACC	5	2	1			13	2											1				1		1												1			1																28
CTCATC				1																																																			1
CTCCCC	4																																																						4
CTCCCT	2																																																						2
CTCGTC	1																																																						1
CTCGTG	1																																																						1
CTCTTC	2			1																																																			3
CTGCTA	2																																																						2
CTGTTG		1																																																					1
CTTCCT	4																																																						4
CTTCTC		1																																																					1
CTTGTC							1																																																1
CTTTCT	1																																																						1
CTTTTT	2																																																						2
GAAAGA	1																																																						1
GAAAGC	1																																																						1
GAAGAG	6	1																																																					7
GAAGGA	1																																																						1
GACCAG	1																																																						1
GACCGG	1																																																						1
GACGAG	1																																																						1
GACGGC	1																																																						1
GAGAGG	1																																																						1
GAGATA		1																																																					1
GAGCGA	1	1																																																					2
GAGCGG	1																																																						1
GAGGAA	11	1	1																																																				13
GAGGAC	7	2																																																					9
GAGGAT		2		1																																																			3
GAGGGA	3	1																																																					4
GAGGGC	3	1																																																					4
GAGGGG	1																																																						1
GATGAA	1																																																						1
GATGAG	1																																																						1
GCAACA	1																																																						1
GCACCG	1																																																						1
GCAGCC	1																																																						1
GCGACT	1																																																						1
GCGGAG	1																																																						1
GCGTCC	1																																																						1
GCTAGG	1																																																						1
GGAAGA	1																																																						1
GGAGAA			1																																																				1
GGAGAG	1																																																						1
GGAGGG	4																																																						4
GGAGGT		1																																																					1
GGATGA	1																																																						1
GGCCCC	1																																																						1
GGCGAT	1																																																						1
GGCGTC	2																																																						2
GGGAGG	4	1																																																					5
GGGCGG	1																																																						1
GGGGAG	5		1																																																				6
GGGGGA	1	1																																																					2
GGGGGC	1																																																						1
GGGTAG	1																																																						1
GGGTTA	3	1					1		1																																														6
GGGTTG	1																																																						1
GGTCGA	1																																																						1
GGTGGA	1																																																						1
GGTTAG	3				1	3	1																							2						1																			11
GTCCTC					2																																																		2
GTTAGG	7	2	1		2	4	1									1				2												1								1															22
GTTGCT	1																																																						1
TAACCC	6					4																																																	10
TACATA	1																																																						1
TAGGGC	1																																																						1
TAGGGT	5	4				1	2		1			1			1							1			1		1								1																				19
TAGGTT	1																																																						1
TATACA		1																																																					1
TATATG	1																																																						1
TATATT	1																																																						1
TATGAA	1																																																						1
TCAGCT	1																																																						1
TCATCC	1																																																						1
TCATCT		1																																																					1
TCCCCC	1																																																						1
TCCCCT	2																																																						2
TCCCTC	1																																																						1
TCCGCT	1																																																						1
TCCTCA	2																																																						2
TCCTCG	2	1																																																					3
TCCTCT	8	2																																																					10
TCGCTC	1																																																						1
TCGCTT	1																																																						1
TCGTCC	2																																																						2
TCTCGC		1																																																					1
TCTCGG					1																																																		1
TCTGTT	1																																																						1
TCTTCA	1																																																						1
TCTTCC	5																																																						5
TGACAG					1																																																		1
TGAGGA				1																																																			1
TGCTGT	2	2																																																					4
TGGAGG	1																																																						1
TGGCGG		1																																																					1
TGTTGC		1	1																																																				2
TGTTGG		1																																																					1
TTAGGG	1			1		1		1					1		1																																								6
TTATAA	2																																																						2
TTCAAA		1																																																					1
TTCCCG	1																																																						1
TTCCTC	1																																																						1
TTCTTT	1																																																						1
TTGCTG		1																																																					1
TTTAAT	2																																																						2
TTTGAA	1																																																						1
TTTGCT	1																																																						1
TTTGGG	1																																																						1
TTTTTG	1																																																						1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-			1		1																																	2
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1		1																																		3
AC/GT	-	-	-	46	12	7	1	1		3	2		2			1								1																															76
AG/CT	-	-	-	88	36	13	14	7	4		1		1	2				1		1						2																													170
AT/AT	-	-	-	46	33	22	15	7	2	6	2																																												133
CG/CG	-	-	-	3	1																																																		4
AAC/GTT	-	-	35	11	14	6	7	2	3	1	2	4	1		2	4	1	1	1		1	1		1																		1												1	100
AAG/CTT	-	-	49	23	16	9	5	2	1		3		2	1																																									111
AAT/ATT	-	-	7	4	1	1			1		1																																												15
ACC/GGT	-	-	22	8	4	3	2	2																																															41
ACG/CGT	-	-	6	1		2																																																	9
ACT/AGT	-	-		1	1				1																																														3
AGC/CTG	-	-	84	27	18	14	6	3	5	4		3	3			1	1																																						169
AGG/CCT	-	-	520	262	147	91	72	47	47	17	16	15	2	8	2	1	1		3	1	1	1	1	2																															1257
ATC/ATG	-	-	14	12	8	1	1	2								1						1																																	40
CCG/CGG	-	-	28	5	7	2																																																	42
AAAC/GTTT	-	2	1																																																				3
AAAG/CTTT	-	3																																																					3
AAAT/ATTT	-		1																																																				1
AAGG/CCTT	-	38	2	5	2	1																																																	48
AATC/ATTG	-	3																																																					3
AATG/ATTC	-	1	1																																																				2
ACAG/CTGT	-	1	1						1																																														3
ACAT/ATGT	-	3	1																																																				4
ACCC/GGGT	-	1																																																					1
ACCG/CGGT	-		1		1																																																		2
ACCT/AGGT	-	1	2	1	1																																																		5
ACGC/CGTG	-	1																																																					1
ACTC/AGTG	-	5	1			1	1					1																																											9
AGAT/ATCT	-	3	2	2	2	1																																																	10
AGCT/AGCT	-	1																																																					1
AGGG/CCCT	-	1215	606	376	211	85	31	29	7	2	2	3		1																																									2568
ATCC/ATGG	-	2																																																					2
CCCG/CGGG	-	1	1																																																				2
AAAAC/GTTTT	5				1																																																		6
AAAAG/CTTTT	28																																																						28
AAAAT/ATTTT	8	1																																																					9
AAACG/CGTTT	1																																																						1
AAAGC/CTTTG	1																																																						1
AAAGG/CCTTT	17			1																																																			18
AAATG/ATTTC	2																																																						2
AAATT/AATTT	2																																																						2
AACAC/GTGTT	2																																																						2
AACTC/AGTTG		1																																																					1
AAGAC/CTTGT	3																																																						3
AAGAG/CTCTT	9																																																						9
AAGCG/CGCTT	3																																																						3
AAGGC/CCTTG	3																																																						3
AAGGG/CCCTT	20	1																																																					21
AAGTG/ACTTC	1																																																						1
AATAC/ATTGT	2																																																						2
AATAT/ATATT	1	2																																																					3
AATCG/ATTCG	1																																																						1
AATTC/AATTG	2																																																						2
ACACG/CGTGT	1																																																						1
ACACT/AGTGT	1																																																						1
ACAGG/CCTGT	1																																																						1
ACATG/ATGTC	1																																																						1
ACCCC/GGGGT	2																																																						2
ACCCG/CGGGT	1																																																						1
ACCCT/AGGGT	1																																																						1
ACCTC/AGGTG	2																																																						2
ACGGC/CCGTG	2	1																																																					3
ACGGG/CCCGT	1																																																						1
ACTCC/AGTGG	1																																																						1
AGAGG/CCTCT	12																																																						12
AGATG/ATCTC	1																																																						1
AGCCG/CGGCT	5																																																						5
AGGCG/CCTCG	1																																																						1
AGGGC/CCCTG	3																																																						3
AGGGG/CCCCT	70	8	1					1																																															80
ATCCG/ATCGG	8	1																																																					9
ATGCC/ATGGC	1	1																																																					2
CCCCG/CGGGG	6																																																						6
CCCGG/CCGGG	2																																																						2
CCGCG/CGCGG	2																																																						2
AAAAAC/GTTTTT	3																																																						3
AAAAAG/CTTTTT	5																																																						5
AAAAGC/CTTTTG	1																																																						1
AAAAGG/CCTTTT	1																																																						1
AAAATT/AATTTT	2																																																						2
AAACAG/CTGTTT	1																																																						1
AAACCC/GGGTTT	1																																																						1
AAACCG/CGGTTT		1																																																					1
AAACCT/AGGTTT	1																																																						1
AAAGAG/CTCTTT	2																																																						2
AAAGCG/CGCTTT	2																																																						2
AAAGGG/CCCTTT	2																																																						2
AAATAT/ATATTT	1																																																						1
AAATTC/AATTTG	3	1																																																					4
AAATTG/AATTTC		1																																																					1
AACACC/GGTGTT		2																																																					2
AACAGC/CTGTTG	11	10	2																																																				23
AACAGG/CCTGTT		1																																																					1
AACCAC/GGTTGT	1	1																																																					2
AACCCC/GGGGTT	1																																																						1
AACCCT/AGGGTT	53	14	6	2	4	28	9	1	3		1	2	1		3	1		1		2		2		1	1		1			2		1			1	2			1	1															144
AACGGG/CCCGTT	1																																																						1
AAGAGG/CCTCTT	42	5	1	1																																																			49
AAGATG/ATCTTC	2	1																																																					3
AAGCAC/CTTGTG	1																																																						1
AAGCCG/CGGCTT	1																																																						1
AAGCGG/CCGCTT	1																																																						1
AAGCTG/AGCTTC	1																																																						1
AAGGAC/CCTTGT							1																																																1
AAGGAG/CCTTCT	3	4	2	1																																																			10
AAGGGC/CCCTTG		2																																																					2
AAGGGG/CCCCTT	2																																																						2
AAGGGT/ACCCTT	1																																																						1
AAGGTG/ACCTTC	2																																																						2
AATATG/ATATTC	1																																																						1
AATCAG/ATTCTG	1																																																						1
AATGAT/ATCATT	2																																																						2
AATTAT/AATTAT	2																																																						2
ACACAT/ATGTGT	1																																																						1
ACAGTG/ACTGTC					1																																																		1
ACATAT/ATATGT	2	1																																																					3
ACCAGC/CTGGTG	1																																																						1
ACCAGG/CCTGGT	2																																																						2
ACCCCC/GGGGGT	1																																																						1
ACCCCT/AGGGGT	1																																																						1
ACCCTC/AGGGTG	1																																																						1
ACCGAG/CGGTCT					1																																																		1
ACCGCC/CGGTGG		2																																																					2
ACCGGC/CCGGTG	1																																																						1
ACCGGG/CCCGGT	1																																																						1
ACCTCC/AGGTGG	2	1		1																																																			4
ACCTCG/AGGTCG	1	1																																																					2
ACGAGC/CGTGCT	2																																																						2
ACGAGG/CCTCGT	17	5			2																																																		24
ACGCCG/CGGCGT	2																																																						2
ACGCGG/CCGCGT	2																																																						2
ACGGCG/CCGTCG	3																																																						3
ACGTGC/ACGTGC	1																																																						1
ACTGCC/AGTGGC	1																																																						1
ACTGCG/AGTCGC	1																																																						1
ACTGCT/AGCAGT	2																																																						2
AGAGAT/ATCTCT		1																																																					1
AGAGCG/CGCTCT	2	2																																																					4
AGAGGG/CCCTCT	9	1																																																					10
AGCATC/ATGCTG	1																																																						1
AGCCCT/AGGGCT	2	1																																																					3
AGCCGC/CGGCTG	2																																																						2
AGCCTG/AGGCTC													1			1																																							2
AGCGGG/CCCGCT	1																																																						1
AGGATG/ATCCTC	6	2		6																																																			14
AGGCGG/CCGCCT	3																																																						3
AGGGCG/CCCTCG	4	1																																																					5
AGGGGC/CCCCTG		1																																																					1
AGGGGG/CCCCCT	41	6	1	1																																																			49
ATCGCC/ATGGCG	1																																																						1
CCCCCG/CGGGGG	3																																																						3
CCCCGG/CCGGGG	2																																																						2
CCCGCG/CGCGGG	2																																																						2
