Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_977926815.1/fasta/hub_GCA_977926815.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              15
Total size of examined sequences (bp):           38053323
Total number of identified SSRs:                 24568
Number of SSR containing sequences:              15
Number of sequences containing more than 1 SSR:  15
Number of SSRs present in compound formation:    3888


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	12175
2	7119
3	918
4	724
5	2055
6	1577

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	714	669	636	600	561	484	444	407	428	326	213	157	123	81	70	49	39	25	16	10	4	4	5	2	2	1		1							1																																																																																																6072
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	2																																																																																																																																	3
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	733	660	616	590	521	562	475	432	394	328	205	145	119	89	59	55	47	29	9	9	9	3	6	4		1																																																																																																									6100
AC	-	-	-	30	42	17	10	1	8	2	3	2	1		1														1				1																																																																																																																			119
AG	-	-	-	15	8	4	3	4	2	3	1	1	1		1	1		1	1								1																																																																																																																									47
AT	-	-	-	1219	555	344	270	225	177	156	113	93	84	60	65	53	49	47	36	39	24	16	32	27	25	28	21	11	11	11	8	13	9	14	3	6	3	1	1																																																																																																													3849
CA	-	-	-	25	14	12	9	2	6	1		1	1																																																																																																																																							71
CT	-	-	-	8	5	6	4	4	1	1		1	1					1						1																																																																																																																												33
GA	-	-	-	16	1	4	1	4		1	2						1	1																																																																																																																																		31
GC	-	-	-	4																																																																																																																																																4
GT	-	-	-	27	23	9	8	4	10	3	4		1																																																																																																																																							89
TA	-	-	-	815	417	256	194	183	141	122	75	59	52	50	33	32	29	29	31	27	25	18	16	15	19	13	9	11	7	8	4	9	8	2	6	4	1	3	1			1																																																																																																										2725
TC	-	-	-	9	8	7	2	4	2	3	1	1	1	1		1														1																																																																																																																						41
TG	-	-	-	31	20	18	12	11	7	6	2			1			1																									1																																																																																																										110
AAC	-	-	3	1																																																																																																																																																4
AAG	-	-	12	5	2																																																																																																																																															19
AAT	-	-	60	16	3	3	1	1		1	2	1	1		1						1		1			1									1					2										1					1																																																																																													98
ACA	-	-		2					1																																																																																																																																											3
ACC	-	-	4	1																																																																																																																																																5
ACG	-	-	1																																																																																																																																																	1
ACT	-	-	1	1	1																																																																																																																																															3
AGA	-	-	6	4	6	5	2	1																																																																																																																																												24
AGC	-	-	3		1																																																																																																																																															4
AGG	-	-	3		2	1	1																																																																																																																																													7
AGT	-	-	3	3	1	1						1																																																																																																																																								9
ATA	-	-	31	7	4	3	3	1			1	2		1						1											1												1																																																																																																									56
ATC	-	-	6	1	1	1																																																																																																																																														9
ATG	-	-	3	1	2	1	1										1																																																																																																																																			9
ATT	-	-	38	7	3					1			1									1																																																																																																																														51
CAA	-	-	4	1		1			1																																																																																																																																											7
CAC	-	-	2	2																																																																																																																																																4
CAG	-	-	2	3			1																																																																																																																																													6
CAT	-	-	1		3		1																																																																																																																																													5
CCA	-	-	1	1			1																																																																																																																																													3
CCT	-	-	4	3	2			1																																																																																																																																												10
CGC	-	-	1																																																																																																																																																	1
CTA	-	-	2	3																																																																																																																																																5
CTC	-	-	4	1	1		1																																																																																																																																													7
CTG	-	-	3	1	1	1	2																																																																																																																																													8
CTT	-	-	9	3	1	3	2			1																																																																																																																																										19
GAA	-	-	36	9	9	9	3	1	1																																																																																																																																											68
GAC	-	-			1																																																																																																																																															1
GAG	-	-	1	5	3																																																																																																																																															9
GAT	-	-	8	7	1	3																																																																																																																																														19
GCA	-	-	1	1		1																																																																																																																																														3
GCT	-	-	5				1																																																																																																																																													6
GGA	-	-	8		2																																																																																																																																															10
GGT	-	-	1		1																																																																																																																																															2
GTA	-	-		2	1																																																																																																																																															3
GTC	-	-	2																																																																																																																																																	2
GTG	-	-	3																																																																																																																																																	3
GTT	-	-	1	1																																																																																																																																																2
TAA	-	-	38	15	10	4	1		3			2	2	1	2		1						1						1										1	2					1																																																																																																							85
TAC	-	-	8	5	2						2																																																																																																																																									17
TAG	-	-	2																																																																																																																																																	2
TAT	-	-	42	15	10	3		2		3			2	1							2	1																																1																																																																																														82
TCA	-	-	10	3	2	2	1		1																																																																																																																																											19
TCC	-	-	8	7	1	2																																																																																																																																														18
TCG	-	-		1																																																																																																																																																1
TCT	-	-	10	7	5	1	2	1	1	1	1																																																																																																																																									29
TGA	-	-	4	2			1																																																																																																																																													7
TGC	-	-	3		1	1																																																																																																																																														5
TGG	-	-	5																																																																																																																																																	5
TGT	-	-	3	2	3																																																																																																																																															8
TTA	-	-	45	12	7	3	1		3	1	2	1			1	1		1	1	1									1					1						1	1																																																																																																											84
TTC	-	-	23	9	5	4		2																																																																																																																																												43
TTG	-	-	3	1	1	1		1	1																																																																																																																																											8
AAAC	-	4	3				1																																																																																																																																													8
AAAG	-	6	2	1	2																																																																																																																																															11
AAAT	-	37	8	4		2	2		2	1																																																																																																																																										56
AACG	-						1																																																																																																																																													1
AAGA	-	5	2	1			1																																																																																																																																													9
AAGC	-	1																																																																																																																																																		1
AAGG	-		1	3																																																																																																																																																4
AATA	-	21	8	1	1	1							1																																																																																																																																							33
AATG	-	1																																																																																																																																																		1
AATT	-	2																																																																																																																																																		2
ACAA	-	1																																																																																																																																																		1
ACAT	-	16	9	2	1	1		1																																												1																																																																							1																									32
ACGT	-	4																																																																																																																																																		4
AGAA	-	2	1		1																																																																																																																																															4
AGAT	-	1																																																																																																																																																		1
AGCT	-	1																																																																																																																																																		1
AGGA	-	1																																																																																																																																																		1
AGGC	-	1																																																																																																																																																		1
ATAA	-	15	2	1	2	1		1																																																																																																																																												22
ATAC	-	38	13	6	2		1						1				1					1									1																								1												1																																																																																	66
ATAG	-	1																																																																																																																																																		1
ATCT	-	1																																																																																																																																																		1
ATGA	-			1																																																																																																																																																1
ATGC	-	4	3	1																																																																																																																																																8
ATGT	-	7	3	5		2															1																																																											1																									1		1																																									21
ATTA	-	5										1																																																																																																																																								6
ATTC	-			1	1																																																																																																																																															2
ATTT	-	10	1	2						1																																																																																																																																										14
CAAA	-		1	1																																																																																																																																																2
CAAG	-	1																																																																																																																																																		1
CACG	-	1																																																																																																																																																		1
CAGG	-	1																																																																																																																																																		1
CATA	-	8	6	2				1					1	1																																																											1																																																																											20
CATC	-										1																																																																																																																																									1
CATG	-	4	1		1																																																																																																																																															6
CATT	-	2																																																																																																																																																		2
CCAC	-	1																																																																																																																																																		1
CCAT	-	1	1																																																																																																																																																	2
CCTT	-	1		1																																																																																																																																																2
CGCA	-	2																																																																																																																																																		2
CTAC	-		1																																																																																																																																																	1
CTAT	-		1																																																																																																																																																	1
CTGC	-		1																																																																																																																																																	1
CTTT	-			1		1																															1																																																																																																															3
GAAA	-	1	2	1																																																																																																																																																4
GAAG	-	2																																																																																																																																																		2
GAAT	-	1																																																																																																																																																		1
GATA	-			1			1																																																																																																																																													2
GATG	-		1	2																																																																																																																																																3
GCAC	-			1																																																																																																																																																1
GCAT	-	3	2																																																																																																																																																	5
GCGT	-	1																																																																																																																																																		1
GGAT	-	1		1																																																																																																																																																2
GGCA	-		1																																																																																																																																																	1
GTAC	-	2	2																																																																																																																																																	4
GTAT	-	13	6	4	3			1									1																																																																																																																																			28
GTGC	-	2	2																																																																																																																																																	4
GTTT	-		3																																																																																																																																																	3
TAAA	-	14	4					1																																																																																																																																												19
TAAT	-	5																																																																																																																																																		5
TACA	-	15	12	4	5			1										1						1		1	1		1																																																																					1						1																																												44
TACG	-	3	1																																																																																																																																																	4
TAGC	-		3																																																																																																																																																	3
TAGG	-			1																																																																																																																																																1
TATC	-	2																																										1																																																																																																								3
TATG	-	15	11	2	1	2	2	1																																																																																																																																												34
TATT	-	30	6	1	3	5				1																																																																																																																																										46
TCCA	-	1																																																																																																																																																		1
TCCT	-	1																																																																																																																																																		1
TCTA	-	1																																																																																																																																																	1	2
TCTG	-		1																																																																																																																																																	1
TCTT	-	2	1		3																																																																																																																																															6
TGCA	-	6	6																																																																																																																																																	12
TGCG	-	2																																																																																																																																																		2
TGCT	-	1																																																																																																																																																		1
TGTA	-	12	9	4		1						1				1																														1																			1																								1																																																											31
TTAT	-	12	3					1																																																																																																																																												16
TTCC	-		2																																																																																																																																																	2
TTCG	-	1																																																																																																																																																		1
TTCT	-	3			3																																																																																																																																															6
TTGC	-		1																																																																																																																																																	1
TTGT	-		1																																																																																																																																																	1
TTTA	-	28	12	5	3	1			1			1																																																																																																																																								51
TTTC	-	2	1	1		1																																																																																																																																														5
TTTG	-	3					1																																																																																																																																													4
AAAAC	11	3	7	2				1																																																																																																																																												24
AAAAG	26	5	2																																																																																																																																																	33
AAAAT	226	102	26	4	1	2	1		1									1																																																																																																																																		364
AAACA	2			1																																																																																																																																																3
AAACG	2																																																																																																																																																			2
AAACT		1																																																																																																																																																		1
AAAGA	4	1	1	3																																																																																																																																																9
AAAGC		2	1																																																																																																																																																	3
AAAGG		2																																																																																																																																																		2
AAATA	68	21	15	6			1																	1																																																																																																																												112
AAATC	1	1																																																																																																																																																		2
AAATG	5		2																																																																																																																																																	7
AAATT	13	3	1																																																																																																																																																	17
AACAA	1																																																																																																																																																			1
AACAC		1																																																																																																																																																		1
AACAG		1																																																																																																																																																		1
AACGA	1																																																																																																																																																			1
AACTA			1																																																																																																																																																	1
AAGAA	2	2	1																																																																																																																																																	5
AAGAG	1																																																																																																																																																			1
AAGCA				1																																																																																																																																																1
AAGCG	1																																																																																																																																																			1
AAGGA			1																																																																																																																																																	1
AAGGG		1																																																																																																																																																		1
AAGTT	1																																																																																																																																																			1
AATAA	56	19	5							1																																																																																																																																										81
AATAC	1																																																																																																																																																			1
AATAG		1																																																																																																																																																		1
AATAT	8	2																																																																																																																																																		10
AATCC		1																																																																																																																																																		1
AATGA	1																																																																																																																																																			1
AATTA	1		1																																																																																																																																																	2
AATTT	4	1																																																																																																																																																		5
ACAAC	1																																																																																																																																																			1
ACAAT	2																1																																																																																																																																			3
ACAGC	1																																																																																																																																																			1
ACAGT	2																																																																																																																																																			2
ACATG	1																																																																																																																																																			1
ACCAT	1																																																																																																																																																			1
ACGCA	1																																																																																																																																																			1
ACGCC	1																																																																																																																																																			1
ACGGC	1																																																																																																																																																			1
ACTAC		1																																																																																																																																																		1
ACTTC	1																																																																																																																																																			1
AGAAA	7	4	2																																																																																																																																																	13
AGAAG	2																																																																																																																																																			2
AGAGC	1																																																																																																																																																			1
AGCAC	1																																																																																																																																																			1
AGCGC	1																																																																																																																																																			1
AGCTG	1	1																																																																																																																																																		2
AGGAA			1																																																																																																																																																	1
AGGAG	1	1																																																																																																																																																		2
AGGGG	1																																																																																																																																																			1
AGTAT	1																																																																																																																																																			1
AGTTC		1																																																																																																																																																		1
ATAAA	45	14	1																																																																																																																																																	60
ATAAC	1							1																																																																																																																																												2
ATAAG	2																																																																																																																																																			2
ATAAT	7																																																																																																																																																			7
ATAGC	1																																																																																																																																																			1
ATAGT	1																																																																																																																																																			1
ATATA	22	2	3																																																																																																																																																	27
ATATC	1																																																																																																																																																			1
ATATT	7											1																																																																																																																																								8
ATCCC			1																																																																																																																																																	1
ATCGA		1																																																																																																																																																		1
ATGAA					1																																																																																																																																															1
ATGAC				1																																																																																																																																																1
ATGAT		1																																																																																																																																																		1
ATGCA		1																																																																																																																																																		1
ATGTC	1																																																																																																																																																			1
ATTAA	3	3																																																																																																																																																		6
ATTAT	3	1																																																																																																																																																		4
ATTCG	1																																																																																																																																																			1
ATTGA	1																																																																																																																																																			1
ATTTA	5	2																																																																																																																																																		7
ATTTC	1																																																																																																																																																			1
ATTTT	53	10	5	2																																																																																																																																																70
CAAAA	2	1																																																																																																																																																		3
CAAAG	1	2		1																																																																																																																																																4
CAACT	2																																																																																																																																																			2
CAAGC		1																																																																																																																																																		1
CACAA	1																																																																																																																																																			1
CACAG	1																																																																																																																																																			1
CACTT	2	1																																																																																																																																																		3
CAGTT		1																																																																																																																																																		1
CATAA	1																																																																																																																																																			1
CATCG	1																																																																																																																																																			1
CATCT	1																																																																																																																																																			1
CATTA	1																																																																																																																																																			1
CATTG	1																																																																																																																																																			1
CATTT	1																																																																																																																																																			1
CCAAA	2																																																																																																																																																			2
CCAGA	1																																																																																																																																																			1
CCATA	1																																																																																																																																																			1
CCCCA	1																																																																																																																																																			1
CCCCT	2																																																																																																																																																			2
CCCTT		1																																																																																																																																																		1
CCGTC	1																																																																																																																																																			1
CCTTT	1																																																																																																																																																			1
CGATA	1																																																																																																																																																			1
CGATG	2	1																																																																																																																																																		3
CGCAT			1																																																																																																																																																	1
CGCCA		1																																																																																																																																																		1
CGTAG	1																																																																																																																																																			1
CGTTC	1																																																																																																																																																			1
CGTTT	1						1																																																																																																																																													2
CTAAA			1																																																																																																																																																	1
CTATG		1																																																																																																																																																		1
CTCCT	1																																																																																																																																																			1
CTCGC	1																																																																																																																																																			1
CTCTC	2																																																																																																																																																			2
CTCTG	1																																																																																																																																																			1
CTCTT	1																																																																																																																																																			1
CTGTA	2	1	1	1																																																																																																																																																5
CTGTG		1																																																																																																																																																		1
CTTAG	1																																																																																																																																																			1
CTTAT	1																																																																																																																																																			1
CTTCC	2																																																																																																																																																			2
CTTCT	1																																																																																																																																																			1
CTTTC	2			1																																																																																																																																																3
CTTTG	1																																																																																																																																																			1
CTTTT	10	2	1																																																																																																																																																	13
GAAAA	8	3	3																																																																																																																																																	14
GAAAC		1																																																																																																																																																		1
GAAAG	2	1																																																																																																																																																		3
GAAAT	2																																																																																																																																																			2
GAACC	1																																																																																																																																																			1
GAATA	1																																																																																																																																																			1
GACGC	1																																																																																																																																																			1
GACTG	1																																																																																																																																																			1
GAGAA	1	1																																																																																																																																																		2
GAGAC	1																																																																																																																																																			1
GAGAG	1																																																																																																																																																			1
GAGAT	1																																																																																																																																																			1
GAGCT	1																																																																																																																																																			1
GAGGG	1																																																																																																																																																			1
GATAC	1	1																																																																																																																																																		2
GATAT		1																																																																																																																																																		1
GATCG			1																																																																																																																																																	1
GCAAA	1																																																																																																																																																			1
GCAAC	1																																																																																																																																																			1
GCAAG	1																																																																																																																																																			1
GCAGA	1																																																																																																																																																			1
GCATA			1	1																																																																																																																																																2
GCATG	1		1																																																																																																																																																	2
GCCAA	1	1																																																																																																																																																		2
GCGAG	1																																																																																																																																																			1
GCGAT	2	1																																																																																																																																																		3
GCGCA	2																																																																																																																																																			2
GCGTA	1																																																																																																																																																			1
GCGTC	1																																																																																																																																																			1
GCTCT	1																																																																																																																																																			1
GCTTT	1																																																																																																																																																			1
GGAAA	1																																																																																																																																																			1
GGAAG	1	1																																																																																																																																																		2
GGAGA	1																																																																																																																																																			1
GGCAC		1																																																																																																																																																		1
GGCAT	1																																																																																																																																																			1
GGGAA	1																																																																																																																																																			1
GGGAC	1																																																																																																																																																			1
GGGAG	1																																																																																																																																																			1
GGGGA	1																																																																																																																																																			1
GGGGT	1																																																																																																																																																			1
GGTAC		1																																																																																																																																																		1
GGTAT		1																																																																																																																																																		1
GTACA	1																																																																																																																																																			1
GTATA	1																																																																																																																																																			1
GTATG	1																																																																																																																																																			1
GTATT	2																																																																																																																																																			2
GTCAT	1																																																																																																																																																			1
GTGAT	1																																																																																																																																																			1
GTGCT	1																																																																																																																																																			1
GTTGA		1																																																																																																																																																		1
GTTGC	2																																																																																																																																																			2
GTTGT	1																																																																																																																																																			1
GTTTC	1																																																																																																																																																			1
GTTTG	1																																																																																																																																																			1
GTTTT	4	1																																																																																																																																																		5
TAAAA	48	13	3	1																																																																																																																																																65
TAAAC	2																																																																																																																																																			2
TAAAT	7	3	2	1																																																																																																																																																13
TAATA	10	2																																																																																																																																																		12
TAATT	3	2	1																																																																																																																																																	6
TACGA	1																																																																																																																																																			1
TACTA			1																																																																																																																																																	1
TACTG		1																																																																																																																																																		1
TAGAT	1																																																																																																																																																			1
TAGCA	1																																																																																																																																																			1
TAGGA	1																																																																																																																																																			1
TAGTA	2																																																																																																																																																			2
TATAA	8	1																																																																																																																																																		9
TATAC	1																																																																																																																																																			1
TATAG			1																																																																																																																																																	1
TATAT	11	2	1	1																																																																																																																																																15
TATCC		1																																																																																																																																																		1
TATGA	1																																																																																																																																																			1
TATGT	1							1																																																																																																																																												2
TATTA	6	1	1																																																																																																																																																	8
TATTC	2																																																																																																																																																			2
TATTG		1																																																																																																																																																		1
TATTT	45	17	7	2																																																																																																																																																71
TCAAA		1																																																																																																																																																		1
TCACG		1																																																																																																																																																		1
TCATG	1																																																																																																																																																			1
TCATT	2																																																																																																																																																			2
TCCCC	2																																																																																																																																																			2
TCCTT			1																																																																																																																																																	1
TCGAA		1																																																																																																																																																		1
TCTCT	1																																																																																																																																																			1
TCTTA	1																																																																																																																																																			1
TCTTC		1																																																																										1																																																																								2
TCTTT	6	2	3																																																																																																																																																	11
TGAAA	1																																																																																																																																																			1
TGATA		1																																																																																																																																																		1
TGCGA	1																																																																																																																																																			1
TGCTC	2																																																																																																																																																			2
TGCTT	1	1																																																																																																																																																		2
TGGCA	1																																																																																																																																																			1
TGGGG	2																																																																																																																																																			2
TGGTA	1																																																																																																																																																			1
TGTAA	1																																																																																																																																																			1
TGTAC	1	2																																																																																																																																																		3
TGTCT										1																																																																																																																																										1
TGTTC		1																																																																																																																																																		1
TGTTG	2																																																																																																																																																			2
TGTTT	4	1	1	1																																																																																																																																																7
TTAAA	8																																																																																																																																																			8
TTAAT	4		1																																																																																																																																																	5
TTACA	1																																																																																																																																																			1
TTACT	1																																																																																																																																																			1
TTATA	16	3	1		1																																																																																																																																															21
TTATG	1	1																																																																																																																																																		2
TTATT	105	24	14	2	1																																																																																																																																															146
TTCAC	1																																																																																																																																																			1
TTCAG	1																																																																																																																																																			1
TTCAT	1																																																																																																																																																			1
TTCCC		1																																																																																																																																																		1
TTCCT	1																																																																																																																																																			1
TTCGT	1																																																																																																																																																			1
TTCTA	1																																																																																																																																																			1
TTCTC	1																																																																																																																																																			1
TTCTT	8	1	2																																																																																																																																																	11
TTGCA	1		1																																																																																																																																																	2
TTGCT		1																																																																																																																																																		1
TTGTA	1	1												1																																																																																																																																						3
TTGTT	1																																																																																																																																																			1
TTTAA	7	1																																																																																																																																																		8
TTTAC			1																																																																																																																																																	1
TTTAT	77	38	17	4		1		1														1		1																																																																																																																												140
TTTCA	3																																																																																																																																																			3
TTTCC	4			1																																																																																																																																																5
TTTCG	1	1																																																																																																																																																		2
TTTCT	16	3		1																																																																																																																																																20
TTTGA			1																																																																																																																																																	1
TTTGC		2	1																																																																																																																																																	3
TTTGT		1																																																																																																																																																		1
TTTTA	153	51	24	4	2	1			1																1																																																																																																																											237
TTTTC	22	11	4	1																					1																																																																																																																											39
TTTTG	5	1	2		1																																																																																																																																															9
AAAAAC	3	1																																																																																																																																																		4
AAAAAG	19	1	5																																																																																																																																																	25
AAAAAT	24	11	3																																																																																																																																																	38
AAAACA	2	3																																																																																																																																																		5
AAAACC	1																																																																																																																																																			1
AAAACG	1	1																																																																																																																																																		2
AAAAGA	5	1	2																																																																																																																																																	8
AAAAGC	2	1																																																																																																																																																		3
AAAAGG	2	2																																																																																																																																																		4
AAAAGT		1																																																																																																																																																		1
AAAATA	16	6	1																																																																																																																																																	23
AAAATG	2	2																																																																																																																																																		4
AAAATT	3	1																																																																																																																																																		4
AAACAC	1																																																																																																																																																			1
AAACAT		1																																																																																																																																																		1
AAACGA		1																																																																																																																																																		1
AAACGC	3																																																																																																																																																			3
AAAGAA		2																																																																																																																																																		2
AAAGAG	1	1																																																																																																																																																		2
AAAGGA	2																																																																																																																																																			2
AAATAA	8	1																																																																																																																																																		9
AAATAT	3	3																																																																																																																																																		6
AAATGA	1	1																																																																																																																																																		2
AAATGC	3	1	1																																																																																																																																																	5
AAATGT	1																																																																																																																																																			1
AAATTA	1	1																																																																																																																																																		2
AACAGC	2																																																																																																																																																			2
AACATG		1																																																																																																																																																		1
AACATT						1																																																																																																																																														1
AACCAG				1																																																																																																																																																1
AACGCA	1																																																																																																																																																			1
AACGGC	2																																																																																																																																																			2
AACGGT			1																																																																																																																																																	1
AAGAGA	1																																																																																																																																																			1
AAGAGG	1																																																																																																																																																			1
AAGCGA		2																																																																																																																																																		2
AAGCGG	1																																																																																																																																																			1
AAGGAA	1	1																																																																																																																																																		2
AAGGGG	1																																																																																																																																																			1
AAGTGG		1																																																																																																																																																		1
AATAAA	10	1																																																																																																																																																		11
AATAAC				2																																																																																																																																																2
AATATA	4	1																																																																																																																																																		5
AATATT	2																																																																																																																																																			2
AATCAA			1																																																																																																																																																	1
AATGAA	1																																																																																																																																																			1
AATGAC	1																																																																																																																																																			1
AATGAT	1																																																																																																																																																			1
AATGCA	2	4																																																																																																																																																		6
AATGCG		1																																																																																																																																																		1
AATGGA		1																																																																																																																																																		1
AATTAT	2																																																																																																																																																			2
AATTCA		1																																																																																																																																																		1
ACAAAA		1																																																																																																																																																		1
ACAATC		1																																																																																																																																																		1
ACACAG	1																																																																																																																																																			1
ACACAT	2																																																																																																																																																			2
ACACGA												1																																																																																																																																								1
ACACGC	1																																																																																																																																																			1
ACACGT	1																																																																																																																																																			1
ACAGAG	1																																																																																																																																																			1
ACAGCC		1																																																																																																																																																		1
ACAGGC		1																																																																																																																																																		1
ACAGTC			1																																																																																																																																																	1
ACATAC	4																																																																																																																																																			4
ACATAT	5	3	1																																																																																																																																																	9
ACATCT	1																																																																																																																																																			1
ACATGC	6	1																																																																																																																																																		7
ACATGT	2	1																																																																																																																																																		3
ACATTT				1																																																																																																																																																1
ACCACT	1																																																																																																																																																			1
ACCAGT	1																																																																																																																																																			1
ACCGTT		1																																																																																																																																																		1
ACGACC		1																																																																																																																																																		1
ACGAGG		1																																																																																																																																																		1
ACGCAA		1	1																																																																																																																																																	2
ACGCAT	1																																																																																																																																																			1
ACGGCA	1																																																																																																																																																			1
ACGGTC	1																																																																																																																																																			1
ACGTAT	1																																																																																																																																																			1
ACTACC	1																																																																																																																																																			1
ACTGCA	1																																																																																																																																																			1
ACTGCC	1																																																																																																																																																			1
ACTGCG	2																																																																																																																																																			2
ACTTGC		1																																																																																																																																																		1
AGAAAA	9	1																																																																																																																																																		10
AGAAAC		1																																																																																																																																																		1
AGAAAG		1																																																																																																																																																		1
AGAACC	1																																																																																																																																																			1
AGAAGC	2	2																																																																																																																																																		4
AGAAGG	4																																																																																																																																																			4
AGAAGT	1																																																																																																																																																			1
AGACCA	1																																																																																																																																																			1
AGACGC				1																																																																																																																																																1
AGAGAC		1																																																																																																																																																		1
AGAGAT	2																																																																																																																																																			2
AGAGCT			1																																																																																																																																																	1
AGAGGC	1	1																																																																																																																																																		2
AGAGTT		1																																																																																																																																																		1
AGATAG				1																																																																																																																																																1
AGATCC	1																																																																																																																																																			1
AGATGC	1																																																																																																																																																			1
AGATTC	1																																																																																																																																																			1
AGCAGA		2	1																																																																																																																																																	3
AGCAGT		1																																																																																																																																																		1
AGCCGT	2																																																																																																																																																			2
AGCGGA	1																																																																																																																																																			1
AGCGGC	2																																																																																																																																																			2
AGGAAA		1																																																																																																																																																		1
AGGAAC			1																																																																																																																																																	1
AGGACA							1																																																																																																																																													1
AGGATA			1																																																																																																																																																	1
AGGCAA	1																																																																																																																																																			1
AGGGAA		1																																																																																																																																																		1
AGGGTG	1																																																																																																																																																			1
AGGTGT	1																																																																																																																																																			1
AGTAAA	1																																																																																																																																																			1
AGTAAC			1																																																																																																																																																	1
AGTAGC	1		1																																																																																																																																																	2
AGTGCA			1																																																																																																																																																	1
AGTGGA	1	1																																																																																																																																																		2
AGTGGC	1	1																																																																																																																																																		2
AGTGGT	2																																																																																																																																																			2
ATAAAA	2	1																																																																																																																																																		3
ATAAAC		1																																																																																																																																																		1
ATAAAT	2	4				1																																																																																																																																														7
ATAATC		1																																																																																																																																																		1
ATAATT	2																																																																																																																																																			2
ATACAC	1																																																																																																																																																			1
ATACAG	1																																																																																																																																																			1
ATACAT	10	2		1	1																																																																																																																																															14
ATACCT			1																																																																																																																																																	1
ATACGC	2		1																																																																																																																																																	3
ATACGT	1																																																																																																																																																			1
ATAGGA	1																																																																																																																																																			1
ATATAA	4	1																																																																																																																																																		5
ATATAC	26	2	1	3		1																							1																																																																																																																							34
ATATAG			1																																																																																																																																																	1
ATATGC	2		1																																																																																																																																																	3
ATATGT	6	1						1																																																																																																																																												8
ATATTA	1																																																																																																																																																			1
ATATTC	2																																																																																																																																																			2
ATATTT	1	1		1																																																																																																																																																3
ATCAAC						1																																																																																																																																														1
ATCCGA	1																																																																																																																																																			1
ATCGCA		1																																																																																																																																																		1
ATCGCC		1																																																																																																																																																		1
ATCGGC	2	1																																																																																																																																																		3
ATCGTC	1																																																																																																																																																			1
ATCTAT		1																																																																																																																																																		1
ATCTTC	1																																																																																																																																																			1
ATCTTT	2																																																																																																																																																			2
ATGAAA	3																																																																																																																																																			3
ATGAAC		2																																																																																																																																																		2
ATGAAG		1																																																																																																																																																		1
ATGACA		1	1																																																																																																																																																	2
ATGACC	1																																																																																																																																																			1
ATGAGA	1																																																																																																																																																			1
ATGATC	1																																																																																																																																																			1
ATGATT	1																																																																																																																																																			1
ATGCAA	1	1																																																																																																																																																		2
ATGCAC	3	1																																																																																																																																																		4
ATGCAT	2		1																																																																																																																																																	3
ATGCGA					1																																																																																																																																															1
ATGCGC	1																																																																																																																																																			1
ATGCTG	1																																																																																																																																																			1
ATGGAA	1																																																																																																																																																			1
ATGGAG	1																																																																																																																																																			1
ATGGCA		1																																																																																																																																																		1
ATGGCG	1																																																																																																																																																			1
ATGGCT	1																																																																																																																																																			1
ATGGGT	1																																																																																																																																																			1
ATGTAC	4	1																																																																																																																																																		5
ATGTAT	4	3																																																																																																																																																		7
ATGTGC	3																																																																																																																																																			3
ATGTGT	1																																																																																																																																																			1
ATGTTA	1																																																																																																																																																			1
ATGTTC	2																																																																																																																																																			2
ATTAAA	2																																																																																																																																																			2
ATTAAC		1																																																																																																																																																		1
ATTATA	4																																																																																																																																																			4
ATTCAT	2																																																																																																																																																			2
ATTGTA	1																																																																																																																																																			1
ATTTAC		1																																																																																																																																																		1
ATTTAT	1																					1																																																																																																																														2
ATTTCA		1																																																																																																																																																		1
ATTTCC	1																																																																																																																																																			1
ATTTGA	1																																																																																																																																																			1
ATTTGG	1																																																																																																																																																			1
ATTTTA		1																																																																																																																																																		1
ATTTTC	1																																																																																																																																																			1
ATTTTT	6																																																																																																																																																			6
CAAAAA		2																																																																																																																																																		2
CAAAAC	1																																																																																																																																																			1
CAAAAG	1																																																																																																																																																			1
CAAACG			1																																																																																																																																																	1
CAAATG	1																																																																																																																																																			1
CAACTA	2																																																																																																																																																			2
CAACTG													1																																																																																																																																							1
CAAGGA	1																																																																																																																																																			1
CAAGTA			1																																																																																																																																																	1
CAATAT	1																																																																																																																																																			1
CACAAG		1																																																																																																																																																		1
CACACC	1																																																																																																																																																			1
CACACG	1			1																																																																																																																																																2
CACAGA		1																																																																																																																																																		1
CACATA	2																																																																																																																																																			2
CACATC		1																																																																																																																																																		1
CACCAG	1																																																																																																																																																			1
CACCCC	1																																																																																																																																																			1
CACGGG	1																																																																																																																																																			1
CACGGT	1																																																																																																																																																			1
CACGTA	1	1																																																																																																																																																		2
CACTAG	1																																																																																																																																																			1
CACTCA		1																																																																																																																																																		1
CACTTC	1	1																																																																																																																																																		2
CAGAAA	1																																																																																																																																																			1
CAGACA	1																																																																																																																																																			1
CAGCAA	1	1																																																																																																																																																		2
CAGCAT	1																																																																																																																																																			1
CAGGCA		1																																																																																																																																																		1
CAGGTG	1																																																																																																																																																			1
CAGTAA	1																																																																																																																																																			1
CAGTAG	1																																																																																																																																																			1
CAGTCA	1																																																																																																																																																			1
CAGTGA	2																																																																																																																																																			2
CATAAA	2																																																																																																																																																			2
CATACA	1	1																																																																																																																																																		2
CATACG	1																																																																																																																																																			1
CATATA	5	3	1				1																	1																																																																																																																												11
CATATG	4																																																																																																																																																			4
CATCTA	1																																																																																																																																																			1
CATCTT	1																																																																																																																																																			1
CATGAA		1																																																																																																																																																		1
CATGCA	3																																																																																																																																																			3
CATGTA	2	1	1																																																																																																																																																	4
CATGTG	2	1																																																																																																																																																		3
CATTAA		1																																																																																																																																																		1
CATTCC	1		1																																																																																																																																																	2
CATTCG	1																																																																																																																																																			1
CATTGC	1		1																																																																																																																																																	2
CATTTA		1																																																																																																																																																		1
CATTTC	3	1																																																																																																																																																		4
CCACTA	2																																																																																																																																																			2
CCACTG	4			1																																																																																																																																																5
CCAGAG					1																																																																																																																																															1
CCAGCA	1																																																																																																																																																			1
CCAGTG	1																																																																																																																																																			1
CCATAC	2																																																																																																																																																			2
CCATCG	1																																																																																																																																																			1
CCATTC	1																																																																																																																																																			1
CCCCCT	1																																																																																																																																																			1
CCCTCG	1																																																																																																																																																			1
CCGCAA	1	1																																																																																																																																																		2
CCGCAC		1	1																																																																																																																																																	2
CCGCCA		1	1																																																																																																																																																	2
CCGCTA	2																																																																																																																																																			2
CCGCTG	1																																																																																																																																																			1
CCGCTT	3																																																																																																																																																			3
CCGTTA	1	1																																																																																																																																																		2
CCGTTC	1																																																																																																																																																			1
CCGTTT	1																																																																																																																																																			1
CCTAAA	4																																																																																																																																																			4
CCTATA																														1																																																																																																																						1
CCTATC	1																																																																																																																																																			1
CCTCGA	1																																																																																																																																																			1
CCTGCA	1																																																																																																																																																			1
CCTGCT	1	1																																																																																																																																																		2
CCTGTG		1																																																																																																																																																		1
CCTTCC	1																																																																																																																																																			1
CCTTCT	2		1																																																																																																																																																	3
CCTTTA		1																																																																																																																																																		1
CCTTTT	2																																																																																																																																																			2
CGAAAA	1																																																																																																																																																			1
CGAATC	1																																																																																																																																																			1
CGATAA	1																																																																																																																																																			1
CGATGG	1																																																																																																																																																			1
CGCAAA	1																																																																																																																																																			1
CGCAGC			1																																																																																																																																																	1
CGCATA		1	1																																																																																																																																																	2
CGCATG	1																																																																																																																																																			1
CGCATT	1	1																																																																																																																																																		2
CGCTAT	1																																																																																																																																																			1
CGCTCT	1																																																																																																																																																			1
CGCTGC	1																																																																																																																																																			1
CGCTTA	1																																																																																																																																																			1
CGCTTC		1																																																																																																																																																		1
CGGAAG	1																																																																																																																																																			1
CGGCAG		1																																																																																																																																																		1
CGGGAG	1																																																																																																																																																			1
CGGTAA	1																																																																																																																																																			1
CGGTAG		1																																																																																																																																																		1
CGGTTG	1																																																																																																																																																			1
CGTATG	1																																																																																																																																																			1
CGTCGC	1																																																																																																																																																			1
CGTCTA		1																																																																																																																																																		1
CGTCTT	1																																																																																																																																																			1
CGTGAC		1																																																																																																																																																		1
CGTGTA			1																																																																																																																																																	1
CGTTAC	1																																																																																																																																																			1
CGTTCC		1																																																																																																																																																		1
CGTTGC		1																																																																																																																																																		1
CGTTTC	1																																																																																																																																																			1
CTACAG	1																																																																																																																																																			1
CTACCA		1																																																																																																																																																		1
CTACCG	1	1																																																																																																																																																		2
CTACTG	2		1																																																																																																																																																	3
CTATAC															1																																																																																																																																					1
CTATAG	1																																																																																																																																																			1
CTATAT		1																																																																																																																																																		1
CTATCA			2																																																																																																																																																	2
CTCATT	1																																																																																																																																																			1
CTCCAC	1																																																																																																																																																			1
CTCCTG	1																																																																																																																																																			1
CTCCTT	1																																																																																																																																																			1
CTCGCT	1																																																																																																																																																			1
CTCGGT	1																																																																																																																																																			1
CTCGTA	1																																																																																																																																																			1
CTCGTG		1																																																																																																																																																		1
CTCTAT		1																																																																																																																																																		1
CTCTCC	1																																																																																																																																																			1
CTCTTT	1																																																																																																																																																			1
CTGATG	1																																																																																																																																																			1
CTGCCA	2																																																																																																																																																			2
CTGCCG	1																																																																																																																																																			1
CTGCGA	1																																																																																																																																																			1
CTGCGT	2			1																																																																																																																																																3
CTGCTA	5	1																																																																																																																																																		6
CTGCTT	1		1																																																																																																																																																	2
CTGGTT	1																																																																																																																																																			1
CTGTCC	1																																																																																																																																																			1
CTGTGC					1																																																																																																																																															1
CTGTTA	1																																																																																																																																																			1
CTGTTG			1																																																																																																																																																	1
CTTATA	1																																																																																																																																																			1
CTTCAT	1																																																																																																																																																			1
CTTCCA	1																																																																																																																																																			1
CTTCTA	1																																																																																																																																																			1
CTTCTC	6	1																																																																																																																																																		7
CTTCTG	3																																																																																																																																																			3
CTTTCT		1																																																																																																																																																		1
CTTTGC	1																																																																																																																																																			1
CTTTTA	1																																																																																																																																																			1
CTTTTC	7	1																																																																																																																																																		8
CTTTTG	1																																																																																																																																																			1
CTTTTT	8	2																																																																																																																																																		10
GAAAAA	10	3																																																																																																																																																		13
GAAAAC	3	1																																																																																																																																																		4
GAAAAG	5																																																																																																																																																			5
GAAAAT	2																																																																																																																																																			2
GAAACA	2																																																																																																																																																			2
GAAAGA	4	2	1																																																																																																																																																	7
GAAAGC		1																																																																																																																																																		1
GAAAGG	2																																																																																																																																																			2
GAAATA	1																																																																																																																																																			1
GAAATT	1																																																																																																																																																			1
GAACAC	1																																																																																																																																																			1
GAACCA			1																																																																																																																																																	1
GAACGA		1																																																																																																																																																		1
GAAGAC	1																																																																																																																																																			1
GAAGAG	6	2																																																																																																																																																		8
GAAGAT	2																																																																																																																																																			2
GAAGCA	2	1	2																																																																																																																																																	5
GAAGCG	1																																																																																																																																																			1
GAAGCT	1																																																																																																																																																			1
GAAGGA	3																																																																																																																																																			3
GAAGTA	1																																																																																																																																																			1
GAAGTC	1																																																																																																																																																			1
GAATGC			1																																																																																																																																																	1
GACACG	1																																																																																																																																																			1
GACGAA	1																																																																																																																																																			1
GACGAT			1																																																																																																																																																	1
GACGCC	2																																																																																																																																																			2
GACTGC	2																																																																																																																																																			2
GACTGT	1				1																																																																																																																																															2
GAGAAA	1																																																																																																																																																			1
GAGAAC	2																																																																																																																																																			2
GAGAAG	2		1																																																																																																																																																	3
GAGATG		1																																																																																																																																																		1
GAGATT	1																																																																																																																																																			1
GAGGAA	2	1																																																																																																																																																		3
GAGTCG	1																																																																																																																																																			1
GAGTGA		1																																																																																																																																																		1
GATAAA	1																																																																																																																																																			1
GATAGA	1																																																																																																																																																			1
GATATT	1																																																																																																																																																			1
GATGAC	2		1																																																																																																																																																	3
GATGAG	1																																																																																																																																																			1
GATGGA	1	1																																																																																																																																																		2
GATGGT		1																																																																																																																																																		1
GATGTT	1																																																																																																																																																			1
GATTCA	1																																																																																																																																																			1
GATTCC		1																																																																																																																																																		1
GATTTA	1																																																																																																																																																			1
GCAAAC	1																																																																																																																																																			1
GCAAAT	1																																																																																																																																																			1
GCAACA	1	2																																																																																																																																																		3
GCAAGA		1				1																																																																																																																																														2
GCAAGC	1																																																																																																																																																			1
GCACAC	2																																																																																																																																																			2
GCACAG		1																																																																																																																																																		1
GCACAT	2	1																																																																																																																																																		3
GCACCA	1																																																																																																																																																			1
GCACCT	1																																																																																																																																																			1
GCACGT	2																																																																																																																																																			2
GCACTT	1																																																																																																																																																			1
GCAGAC	2																																																																																																																																																			2
GCAGCG		1																																																																																																																																																		1
GCAGGA			1																																																																																																																																																	1
GCAGGG	1																																																																																																																																																			1
GCAGTA	1	1																																																																																																																																																		2
GCAGTG	4																																																																																																																																																			4
GCATAC		1																																																																																																																																																		1
GCATAT	4																																																																																																																																																			4
GCATCG	1			1																																																																																																																																																2
GCATCT	1																																																																																																																																																			1
GCATGA	1																																																																																																																																																			1
GCATGG			1																																																																																																																																																	1
GCATTA	1																																																																																																																																																			1
GCATTT	1		1																																																																																																																																																	2
GCCACT	1																																																																																																																																																			1
GCGAAC	1																																																																																																																																																			1
GCGATG	1																																																																																																																																																			1
GCGCAT	1																																																																																																																																																			1
GCGGCA	1																																																																																																																																																			1
GCGGTT	1																																																																																																																																																			1
GCGTAT	1			1																																																																																																																																																2
GCGTGT	3																																																																																																																																																			3
GCGTTT			1																																																																																																																																																	1
GCTACT	4		1																																																																																																																																																	5
GCTGAT	1																																																																																																																																																			1
GCTGCC	2																																																																																																																																																			2
GCTTAT			1																																																																																																																																																	1
GCTTCC	1																																																																																																																																																			1
GCTTCT	1																																																																																																																																																			1
GCTTTC	1	1																																																																																																																																																		2
GGAAAA	3																																																																																																																																																			3
GGAAAC			1																																																																																																																																																	1
GGAAAT	1																																																																																																																																																			1
GGAAGA	2	1																																																																																																																																																		3
GGAAGC	2		1																																																																																																																																																	3
GGAAGG	1																																																																																																																																																			1
GGAAGT	1																																																																																																																																																			1
GGAATC	1																																																																																																																																																			1
GGACAT	1																																																																																																																																																			1
GGACCG	1																																																																																																																																																			1
GGAGAC	1																																																																																																																																																			1
GGAGAG	1																																																																																																																																																			1
GGATTC								1																																																																																																																																												1
GGCAAC	1																																																																																																																																																			1
GGCACG	1																																																																																																																																																			1
GGCAGC	2																																																																																																																																																			2
GGCATT	1																																																																																																																																																			1
GGCCTA	1																																																																																																																																																			1
GGCGAT	1																																																																																																																																																			1
GGCTGC		1																																																																																																																																																		1
GGGAAA	1		1																																																																																																																																																	2
GGGAGG	1																																																																																																																																																			1
GGGATG	1																																																																																																																																																			1
GGGCAC	1																																																																																																																																																			1
GGGCAT		1																																																																																																																																																		1
GGGCGT	1																																																																																																																																																			1
GGGGAA		1																																																																																																																																																		1
GGTAAC	1																																																																																																																																																			1
GGTAGC	1	1																																																																																																																																																		2
GGTAGT		1																																																																																																																																																		1
GGTGCT	1																																																																																																																																																			1
GGTGGC			1																																																																																																																																																	1
GGTTGA	1																																																																																																																																																			1
GGTTTA	2	1																																																																																																																																																		3
GTAAAT	1																																																																																																																																																			1
GTAATA	2																																																																																																																																																			2
GTAATC		1																																																																																																																																																		1
GTACAC				1																																																																																																																																																1
GTACAT	2	1																																																																																																																																																		3
GTACGT		1																																																																																																																																																		1
GTAGCA	1		2																																																																																																																																																	3
GTAGCG	4																																																																																																																																																			4
GTATAC	4																																																																																																																																																			4
GTATAT	10																																																																																																																																																			10
GTATGC		4																																																																																																																																																		4
GTCACC	1																																																																																																																																																			1
GTCATC		1																																																																																																																																																		1
GTCGAG		1																																																																																																																																																		1
GTCTCG	1	1																																																																																																																																																		2
GTGAAG		1																																																																																																																																																		1
GTGACA	1																																																																																																																																																			1
GTGATG	1																																																																																																																																																			1
GTGATT	1																																																																																																																																																			1
GTGCAA	1																																																																																																																																																			1
GTGCAC		1																																																																																																																																																		1
GTGCAT	1		1																																																																																																																																																	2
GTGCGA	1																																																																																																																																																			1
GTGCTC	1																																																																																																																																																			1
GTGGAC	1																																																																																																																																																			1
GTGGTA	2																																																																																																																																																			2
GTGTAC	1																																																																																																																																																			1
GTGTAT						1																																																																																																																																														1
GTGTGC	2	1																																																																																																																																																		3
GTGTTC	1																																																																																																																																																			1
GTTATT	1																																																																																																																																																			1
GTTCTT	1																																																																																																																																																			1
GTTGCA	1																																																																																																																																																			1
GTTGCC	1	1																																																																																																																																																		2
GTTGCT			1																																																																																																																																																	1
GTTGGC	1																																																																																																																																																			1
GTTTAC			1																																																																																																																																																	1
GTTTGC		2																																																																																																																																																		2
GTTTTA	1																																																																																																																																																			1
GTTTTC		1																																																																																																																																																		1
GTTTTG	1																																																																																																																																																			1
GTTTTT	2		1																																																																																																																																																	3
TAAAAA	4	1																																																																																																																																																		5
TAAACC	1																																																																																																																																																			1
TAAAGA	1																																																																																																																																																			1
TAAATA	3	2																																																																																																																																																		5
TAATAC	1			1																																																																																																																																																2
TAATAG	2	2																																																																																																																																																		4
TAATAT	2																																																																																																																																																			2
TAATCG	1																																																																																																																																																			1
TAATTA	1																																																																																																																																																			1
TAATTT	3																																																																																																																																																			3
TACAAA		1																																																																																																																																																		1
TACAAC	1																																																																																																																																																			1
TACACA	1		1																																																																																																																																																	2
TACACG	1	1																																																																																																																																																		2
TACACT	1																																																																																																																																																			1
TACATA	6	1			1	1																																																																																																																																														9
TACATG	2																																																																																																																																																			2
TACCGA	1																																																																																																																																																			1
TACCGT	2																																																																																																																																																			2
TACGCA	1																																																																																																																																																			1
TACTGT	2																																																																																																																																																			2
TAGCAG	1																																																																																																																																																			1
TAGCGG	1																																																																																																																																																			1
TAGTAA	2																																																																																																																																																			2
TATAAA	2																																																																																																																																																			2
TATAAT	3																																																																																																																																																			3
TATACA	5	1																																																																																																																																																		6
TATACG	3																																																																																																																																																			3
TATATC	3	1																																																																																																																																																		4
TATATG	14	8	1				1																																																																																																																																													24
TATATT	12	2																																																																																																																																																		14
TATCAT	1																																																																																																																																																			1
TATCGG		1																																																																																																																																																		1
TATCGT	1																																																																																																																																																			1
TATCTC							1																																																																																																																																													1
TATCTG	1																																																																																																																																																			1
TATGAA	1																																																																																																																																																			1
TATGCA	2	1																																																																																																																																																		3
TATGCG	3																																																																																																																																																			3
TATGTA	12	2																																																																																																																																																		14
TATGTG	1		1																																																																																																																																																	2
TATTAA	1																																																																																																																																																			1
TATTAC		2			1																																																																																																																																															3
TATTTA	8	1																																																																																																																																																		9
TATTTT	10	2	1																																																																																																																																																	13
TCACTG		1																																																																																																																																																		1
TCATCC	1																																																																																																																																																			1
TCATCG	2	1																																																																																																																																																		3
TCATGC	1																																																																																																																																																			1
TCATTA					1																																																																																																																																															1
TCATTC		2																																																																																																																																																		2
TCCCTC	1																																																																																																																																																			1
TCCGGT	1																																																																																																																																																			1
TCCTCT	3																																																																																																																																																			3
TCCTGC	1		1																																																																																																																																																	2
TCCTTC	2																																																																																																																																																			2
TCCTTT	2																																																																																																																																																			2
TCGCAG		1																																																																																																																																																		1
TCGCAT	1																																																																																																																																																			1
TCGCGT	1																																																																																																																																																			1
TCGCTT	1																																																																																																																																																			1
TCGTCA	1																																																																																																																																																			1
TCGTTA	1		1																																																																																																																																																	2
TCGTTT		1																																																																																																																																																		1
TCTATA	1																																																																																																																																																			1
TCTCTG	1																																																																																																																																																			1
TCTCTT		1																																																																																																																																																		1
TCTTCA	4																																																																																																																																																			4
TCTTCC	3	2																																																																																																																																																		5
TCTTTA	1																																																																																																																																																			1
TCTTTC	1																																																																																																																																																			1
TCTTTT	2	3																																																																																																																																																		5
TGAAAA	1	1																																																																																																																																																		2
TGAAAC		1																																																																																																																																																		1
TGAAGA	1																																																																																																																																																			1
TGAGGA	1																																																																																																																																																			1
TGATAT	1	1																																																																																																																																																		2
TGCAAA		1	2																																																																																																																																																	3
TGCAAG	1																																																																																																																																																			1
TGCACA	2																																																																																																																																																			2
TGCACT	3																																																																																																																																																			3
TGCAGC	2																																																																																																																																																			2
TGCATA	4																																																																																																																																																			4
TGCATG	3		1																																																																																																																																																	4
TGCATT	1	1																																																																																																																																																		2
TGCCAC		1	1																																																																																																																																																	2
TGCCAT		1																																																																																																																																																		1
TGCCGC	2																																																																																																																																																			2
TGCGAC						1																																																																																																																																														1
TGCGCA	1																																																																																																																																																			1
TGCGGC	1																																																																																																																																																			1
TGCGGT	2	1	1																																																																																																																																																	4
TGCGTC	1																																																																																																																																																			1
TGCGTG	1																																																																																																																																																			1
TGCGTT		1																																																																																																																																																		1
TGCTGT		2	1																																																																																																																																																	3
TGCTTA		1																																																																																																																																																		1
TGCTTT	1																																																																																																																																																			1
TGGATG		1																																																																																																																																																		1
TGGCAA							1																																																																																																																																													1
TGGCAG		1																																																																																																																																																		1
TGGCGT	1																																																																																																																																																			1
TGGTGA			1	1						1																																																																																																																																										3
TGGTGT	1																																																																																																																																																			1
TGGTTA	1																																																																																																																																																			1
TGTAAA	2																																																																																																																																																			2
TGTACA	1																																																																																																																																																			1
TGTACG	1																																																																																																																																																			1
TGTAGG			1																																																																																																																																																	1
TGTAGT	1																																																																																																																																																			1
TGTATA	3	1																																																																																																																																																		4
TGTATG	3	1																																																																																																																																																		4
TGTATT	1																																																																																																																																																			1
TGTCCG	1																																																																																																																																																			1
TGTCTG	1																																																																																																																																																			1
TGTGCA	2	1																																																																																																																																																		3
TGTGTA	1	1	1																																																																																																																																																	3
TGTGTC	1																																																																																																																																																			1
TGTGTT				1																																																																																																																																																1
TGTTCA	1																																																																																																																																																			1
TGTTCG		1																																																																																																																																																		1
TGTTCT	1																																																																																																																																																			1
TGTTGC		1																																																																																																																																																		1
TGTTTT	1						1																																																																																																																																													2
TTAAAA		1																																																																																																																																																		1
TTAATA	2																																																																																																																																																			2
TTAATG	1			1																																																																																																																																																2
TTAATT	1		1																																																																																																																																																	2
TTACGA	1																																																																																																																																																			1
TTACGT		1																																																																																																																																																		1
TTACTT	1																																																																																																																																																			1
TTATAA	5																																																																																																																																																			5
TTATAT	2																																																																																																																																																			2
TTATCG			1																																																																																																																																																	1
TTATTC	1																																																																																																																																																			1
TTATTG	3																																																																																																																																																			3
TTATTT	7	1	1		1																																																																																																																																															10
TTCACC	1	1																																																																																																																																																		2
TTCAGG		1																																																																																																																																																		1
TTCCAC	1	1																																																																																																																																																		2
TTCCAT	1																																																																																																																																																			1
TTCCGA		1																																																																																																																																																		1
TTCCTC	1	1																																																																																																																																																		2
TTCGCC	1																																																																																																																																																			1
TTCGCT	1																																																																																																																																																			1
TTCGTT	1																																																																																																																																																			1
TTCTCC	3	3																																																																																																																																																		6
TTCTCG	1																																																																																																																																																			1
TTCTCT		2																																																																																																																																																		2
TTCTGG	1																																																																																																																																																			1
TTCTTT	3	3	1																																																																																																																																																	7
TTGAAA			1																																																																																																																																																	1
TTGATT			1																																																																																																																																																	1
TTGCGT	1																																																																																																																																																			1
TTGCTA		1																																																																																																																																																		1
TTGCTG	2																																																																																																																																																			2
TTGCTT		2																																																																																																																																																		2
TTGTAC	2																																																																																																																																																			2
TTGTCG	1																																																																																																																																																			1
TTGTGC		1																																																																																																																																																		1
TTGTGT	1																																																																																																																																																			1
TTGTTT		1																																																																																																																																																		1
TTTAAA	1																																																																																																																																																			1
TTTACA		1																																																																																																																																																		1
TTTAGG	1																																																																																																																																																			1
TTTATA	1	2																																																																																																																																																		3
TTTATG	1																																																																																																																																																			1
TTTATT	9	2																																																																																																																																																		11
TTTCAT	1																																																																																																																																																			1
TTTCCC	2																																																																																																																																																			2
TTTCCG			1																																																																																																																																																	1
TTTCCT	2																																																																																																																																																			2
TTTCGC	1																																																																																																																																																			1
TTTCGT		1																																																																																																																																																		1
TTTCTA	1																																																																																																																																																			1
TTTCTC	1																																																																																																																																																			1
TTTCTG	1																																																																																																																																																			1
TTTCTT	5	1																																																																																																																																																		6
TTTGCA	1	1																																																																																																																																																		2
TTTGCC	1																																																																																																																																																			1
TTTGCG			1																																																																																																																																																	1
TTTGGA								1																																																																																																																																												1
TTTTAA	1	1																																																																																																																																																		2
TTTTAC	1																																																																																																																																																			1
TTTTAG	1																																																																																																																																																			1
TTTTAT	14	6																																																																																																																																																		20
TTTTCA	4	2																																																																																																																																																		6
TTTTCC	5	1	1	1																																																																																																																																																8
TTTTCG	3	3	1																																																																																																																																																	7
TTTTCT	6	3								1																																																																																																																																										10
TTTTGT	1	2																																																																																																																																																		3
TTTTTA	20	1																																																																																																																																																		21
TTTTTC	31	6	2							1																																																																																																																																										40
TTTTTG	1																																																																																																																																																			1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1447	1329	1252	1190	1082	1046	919	839	822	654	418	302	242	170	129	104	86	54	25	19	13	7	11	6	2	2		1							1																																																																																																12172
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	2																																																																																																																																	3
AC/GT	-	-	-	113	99	56	39	18	31	12	9	3	3	1	1		1												1				1									1																																																																																																										389
AG/CT	-	-	-	48	22	21	10	16	5	8	4	3	3	1	1	2	1	3	1					1			1			1																																																																																																																						152
AT/AT	-	-	-	2034	972	600	464	408	318	278	188	152	136	110	98	85	78	76	67	66	49	34	48	42	44	41	30	22	18	19	12	22	17	16	9	10	4	4	2			1																																																																																																										6574
CG/CG	-	-	-	4																																																																																																																																																4
AAC/GTT	-	-	14	8	4	2		1	3																																																																																																																																											32
AAG/CTT	-	-	96	37	28	22	9	5	2	2	1																																																																																																																																									202
AAT/ATT	-	-	254	72	37	16	6	4	6	6	5	6	6	3	4	1	1	1	1	2	3	2	2			1			2		1			1	1				1	5	1		1		1					1				1	1																																																																																													456
ACC/GGT	-	-	16	4	1		1																																																																																																																																													22
ACG/CGT	-	-	3	1	1																																																																																																																																															5
ACT/AGT	-	-	16	14	5	1					2	1																																																																																																																																								39
AGC/CTG	-	-	17	5	3	3	4																																																																																																																																													32
AGG/CCT	-	-	28	16	11	3	2	1																																																																																																																																												61
ATC/ATG	-	-	32	14	9	7	4		1								1																																																																																																																																			68
CCG/CGG	-	-	1																																																																																																																																																	1
AAAC/GTTT	-	8	8	1			2																																																																																																																																													19
AAAG/CTTT	-	21	9	5	9	2	1																														1																																																																																																															48
AAAT/ATTT	-	167	44	14	9	10	2	3	3	3		1	1																																																																																																																																							257
AACG/CGTT	-	1					1																																																																																																																																													2
AAGC/CTTG	-	3	1																																																																																																																																																	4
AAGG/CCTT	-	5	3	4																																																																																																																																																12
AATG/ATTC	-	4		2	1																																																																																																																																															7
AATT/AATT	-	12										1																																																																																																																																								13
ACAG/CTGT	-		1																																																																																																																																																	1
ACAT/ATGT	-	124	69	29	12	6	3	5				1	2	1		1	2	1			1	1		1		1	1		1		1															1						1			1										1		1						1							1									1									1						1	1		1																1																									276
ACCC/GGGT	-	1																																																																																																																																																		1
ACCT/AGGT	-		1	1																																																																																																																																																2
ACGC/CGTG	-	8	2	1																																																																																																																																																11
ACGT/ACGT	-	9	3																																																																																																																																																	12
AGAT/ATCT	-	6	1	1			1																																					1																																																																																																							1	11
AGCT/AGCT	-	1	3																																																																																																																																																	4
AGGC/CCTG	-	2	2																																																																																																																																																	4
ATCC/ATGG	-	3	2	3							1																																																																																																																																									9
ATGC/ATGC	-	17	12	1	1																																																																																																																																															31
AAAAC/GTTTT	30	8	10	4	1			1																																																																																																																																												54
AAAAG/CTTTT	109	34	19	5																					1																																																																																																																											168
AAAAT/ATTTT	876	309	117	25	4	4	2	1	2	1								1				1		2	1																																																																																																																											1346
AAACC/GGTTT	3																																																																																																																																																			3
AAACG/CGTTT	7	2					1																																																																																																																																													10
AAACT/AGTTT	2	1	2																																																																																																																																																	5
AAAGC/CTTTG	5	8	2	2																																																																																																																																																17
AAAGG/CCTTT	11	3	3	2																																																																																																																																																19
AAAGT/ACTTT	1		1																																																																																																																																																	2
AAATC/ATTTG	1	2	1																																																																																																																																																	4
AAATG/ATTTC	17		2		1																																																																																																																																															20
AAATT/AATTT	55	15	6	1																																																																																																																																																77
AACAC/GTGTT	5	1																																																																																																																																																		6
AACAG/CTGTT		2																																																																																																																																																		2
AACAT/ATGTT	4	1						2																																																																																																																																												7
AACCG/CGGTT	1																																																																																																																																																			1
AACGC/CGTTG	4																																																																																																																																																			4
AACGG/CCGTT	1																																																																																																																																																			1
AACTC/AGTTG	2	1																																																																																																																																																		3
AACTG/AGTTC	1	2																																																																																																																																																		3
AACTT/AAGTT	1																																																																																																																																																			1
AAGAC/CTTGT										1																																																																																																																																										1
AAGAG/CTCTT	8	2																																																																										1																																																																								11
AAGAT/ATCTT	4																																																																																																																																																			4
AAGCC/CTTGG	1	2																																																																																																																																																		3
AAGCG/CGCTT	1																																																																																																																																																			1
AAGCT/AGCTT	1																																																																																																																																																			1
AAGGC/CCTTG	1																																																																																																																																																			1
AAGGG/CCCTT	4	4																																																																																																																																																		8
AAGTG/ACTTC	4	1																																																																																																																																																		5
AATAC/ATTGT	6	2												1			1																																																																																																																																			10
AATAG/ATTCT	4	1																																																																																																																																																		5
AATAT/ATATT	98	14	6	1	1							1																																																																																																																																								121
AATCC/ATTGG		1																																																																																																																																																		1
AATCG/ATTCG	1	2																																																																																																																																																		3
AATCT/AGATT	1																																																																																																																																																			1
AATGC/ATTGC	2	1	1																																																																																																																																																	4
AATGT/ACATT	3																																																																																																																																																			3
AATTC/AATTG	1																																																																																																																																																			1
ACACT/AGTGT		1																																																																																																																																																		1
ACAGC/CTGTG	4	1																																																																																																																																																		5
ACAGT/ACTGT	6	4	1	1																																																																																																																																																12
ACATC/ATGTG	1																																																																																																																																																			1
ACATG/ATGTC	4			1																																																																																																																																																5
ACCAG/CTGGT	1																																																																																																																																																			1
ACCAT/ATGGT	4	1																																																																																																																																																		5
ACCCC/GGGGT	4																																																																																																																																																			4
ACCGT/ACGGT		1																																																																																																																																																		1
ACGAG/CGTCT	1																																																																																																																																																			1
ACGAT/ATCGT	3	1																																																																																																																																																		4
ACGCC/CGTGG	1	1																																																																																																																																																		2
ACGCG/CGCGT	2																																																																																																																																																			2
ACGCT/AGCGT	2																																																																																																																																																			2
ACGGC/CCGTG	1	1																																																																																																																																																		2
ACGGG/CCCGT	2																																																																																																																																																			2
ACGTC/ACGTG		1																																																																																																																																																		1
ACTAT/AGTAT	6		2																																																																																																																																																	8
ACTGG/AGTCC	1																																																																																																																																																			1
AGAGC/CTCTG	6																																																																																																																																																			6
AGAGG/CCTCT	6	1																																																																																																																																																		7
AGATG/ATCTC	2																																																																																																																																																			2
AGCAT/ATGCT	2	1	1	1																																																																																																																																																5
AGCGC/CGCTG	3																																																																																																																																																			3
AGCTC/AGCTG	2	1																																																																																																																																																		3
AGGAT/ATCCT	1	1																																																																																																																																																		2
AGGCG/CCTCG	2																																																																																																																																																			2
AGGGG/CCCCT	8																																																																																																																																																			8
ATATC/ATATG	2	3																																																																																																																																																		5
ATCCC/ATGGG			1																																																																																																																																																	1
ATCCG/ATCGG			1																																																																																																																																																	1
ATCGC/ATGCG	6	2	1																																																																																																																																																	9
ATGCC/ATGGC	3		1																																																																																																																																																	4
AAAAAC/GTTTTT	10	10	1				1																																																																																																																																													22
AAAAAG/CTTTTT	98	26	10							2																																																																																																																																										136
AAAAAT/ATTTTT	130	33	6		1																																																																																																																																															170
AAAACC/GGTTTT	3																																																																																																																																																			3
AAAACG/CGTTTT	9	9	1																																																																																																																																																	19
AAAACT/AGTTTT	2																																																																																																																																																			2
AAAAGC/CTTTTG	5	3																																																																																																																																																		8
AAAAGG/CCTTTT	31	6	1	1																																																																																																																																																39
AAAAGT/ACTTTT	4	1																																																																																																																																																		5
AAAATC/ATTTTG			2																																																																																																																																																	2
AAAATG/ATTTTC	16	6																																																																																																																																																		22
AAAATT/AATTTT	11	5	1																																																																																																																																																	17
AAACAC/GTGTTT	2			1																																																																																																																																																3
AAACAG/CTGTTT	4	1																																																																																																																																																		5
AAACAT/ATGTTT	3	2																																																																																																																																																		5
AAACCT/AGGTTT	8	1																																																																																																																																																		9
AAACGC/CGTTTG	7	4	4																																																																																																																																																	15
AAACGG/CCGTTT	2		2																																																																																																																																																	4
AAACGT/ACGTTT		1	1																																																																																																																																																	2
AAACTG/AGTTTC		1																																																																																																																																																		1
AAAGAG/CTCTTT	10	8	1																																																																																																																																																	19
AAAGAT/ATCTTT	5																																																																																																																																																			5
AAAGCG/CGCTTT	4	4																																																																																																																																																		8
AAAGGC/CCTTTG	3																																																																																																																																																			3
AAAGGG/CCCTTT	5	1	1																																																																																																																																																	7
AAAGGT/ACCTTT		1																																																																																																																																																		1
AAATAC/ATTTGT	1	1																																																																																																																																																		2
AAATAG/ATTTCT	2																																																																																																																																																			2
AAATAT/ATATTT	43	17		1		1																1																																																																																																																														63
AAATCC/ATTTGG	1							1																																																																																																																																												2
AAATCT/AGATTT	1																																																																																																																																																			1
AAATGC/ATTTGC	11	9	4																																																																																																																																																	24
AAATGG/ATTTCC	7	2																																																																																																																																																		9
AAATGT/ACATTT	4	3		1																																																																																																																																																8
AAATTC/AATTTG	1	1																																																																																																																																																		2
AAATTG/AATTTC	1	1	1																																																																																																																																																	3
AAATTT/AAATTT	1																																																																																																																																																			1
AACAAG/CTTGTT	2																																																																																																																																																			2
AACAAT/ATTGTT	4			2																																																																																																																																																6
AACACC/GGTGTT	1																																																																																																																																																			1
AACACG/CGTGTT	2	1										1																																																																																																																																								4
AACAGC/CTGTTG	6	6	3																																																																																																																																																	15
AACAGG/CCTGTT			1																																																																																																																																																	1
AACAGT/ACTGTT	4		1																																																																																																																																																	5
AACATC/ATGTTG	1					1																																																																																																																																														2
AACATG/ATGTTC	3	4																																																																																																																																																		7
AACATT/AATGTT	2	2		1		1																																																																																																																																														6
AACCAG/CTGGTT	3		1	1																																																																																																																																																5
AACCAT/ATGGTT	1																																																																																																																																																			1
AACCGC/CGGTTG	5	2	1																																																																																																																																																	8
AACCGG/CCGGTT	1																																																																																																																																																			1
AACCTC/AGGTTG	1																																																																																																																																																			1
AACCTG/AGGTTC		1																																																																																																																																																		1
AACGAC/CGTTGT	1																																																																																																																																																			1
AACGAG/CGTTCT	3	1																																																																																																																																																		4
AACGAT/ATCGTT	3		2																																																																																																																																																	5
AACGCC/CGTTGG	2																																																																																																																																																			2
AACGCG/CGCGTT	2																																																																																																																																																			2
AACGGC/CCGTTG	5	2																																																																																																																																																		7
AACGGG/CCCGTT	1	1																																																																																																																																																		2
AACGGT/ACCGTT	6	2	1																																																																																																																																																	9
AACTAC/AGTTGT	4																																																																																																																																																			4
AACTCT/AGAGTT		1																																																																																																																																																		1
AACTGC/AGTTGC	2												1																																																																																																																																							3
AAGAAT/ATTCTT	1																																																																																																																																																			1
AAGACC/CTTGGT	1																																																																																																																																																			1
AAGACG/CGTCTT	3																																																																																																																																																			3
AAGAGC/CTCTTG		1				1																																																																																																																																														2
AAGAGG/CCTCTT	18	7																																																																																																																																																		25
AAGATG/ATCTTC	10	1																																																																																																																																																		11
AAGCAC/CTTGTG		2																																																																																																																																																		2
AAGCAG/CTGCTT	9	5	4																																																																																																																																																	18
AAGCAT/ATGCTT		1	1																																																																																																																																																	2
AAGCGC/CGCTTG	1																																																																																																																																																			1
AAGCGG/CCGCTT	10	1	1																																																																																																																																																	12
AAGCGT/ACGCTT	1																																																																																																																																																			1
AAGCTG/AGCTTC	1																																																																																																																																																			1
AAGGAC/CCTTGT	1						1																																																																																																																																													2
AAGGAG/CCTTCT	23	4	2																																																																																																																																																	29
AAGGAT/ATCCTT			1																																																																																																																																																	1
AAGGCG/CCTTCG	1																																																																																																																																																			1
AAGGGG/CCCCTT	3	1																																																																																																																																																		4
AAGGTG/ACCTTC	1	2																																																																																																																																																		3
AAGTAC/ACTTGT	2		1																																																																																																																																																	3
AAGTAG/ACTTCT	3																																																																																																																																																			3
AAGTAT/ACTTAT	1																																																																																																																																																			1
AAGTCG/ACTTCG	1																																																																																																																																																			1
AAGTGC/ACTTGC	6	1	1																																																																																																																																																	8
AAGTGG/ACTTCC	5	4																																																																																																																																																		9
AAGTGT/ACACTT	1																																																																																																																																																			1
AATACT/AGTATT	1			1																																																																																																																																																2
AATAGC/ATTGCT		1																																																																																																																																																		1
AATAGG/ATTCCT	1																																																																																																																																																			1
AATAGT/ACTATT	6	4			1																																																																																																																																															11
AATATC/ATATTG	3	1																																																																																																																																																		4
AATATG/ATATTC	5																																																																																																																																																			5
AATATT/AATATT	8																																																																																																																																																			8
AATCAC/ATTGTG	1	1																																																																																																																																																		2
AATCAT/ATGATT	1	1																																																																																																																																																		2
AATCCG/ATTCGG	2							1																																																																																																																																												3
AATCGC/ATTGCG		1																																																																																																																																																		1
AATCGG/ATTCCG	1	2																																																																																																																																																		3
AATCGT/ACGATT	2	1																																																																																																																																																		3
AATCTC/AGATTG	1																																																																																																																																																			1
AATCTG/AGATTC	2																																																																																																																																																			2
AATGAC/ATTGTC	1	1	1																																																																																																																																																	3
AATGAG/ATTCTC	2	2																																																																																																																																																		4
AATGAT/ATCATT	2				1																																																																																																																																															3
AATGCC/ATTGGC	1																																																																																																																																																			1
AATGCG/ATTCGC	3	2	1		1																																																																																																																																															7
AATGCT/AGCATT	1																																																																																																																																																			1
AATGGC/ATTGCC	1	2	1				1																																																																																																																																													5
AATGGG/ATTCCC	2		1																																																																																																																																																	3
AATTAC/AATTGT	1																																																																																																																																																			1
AATTAT/AATTAT	17																																																																																																																																																			17
ACACAG/CTGTGT	4	1																																																																																																																																																		5
ACACAT/ATGTGT	17	3	3			1																																																																																																																																														24
ACACCC/GGGTGT	1																																																																																																																																																			1
ACACCT/AGGTGT	1		1																																																																																																																																																	2
ACACGC/CGTGTG	10	1		1																																																																																																																																																12
ACACGG/CCGTGT	2																																																																																																																																																			2
ACACGT/ACGTGT	5	3	1	1																																																																																																																																																10
ACACTC/AGTGTG		1																																																																																																																																																		1
ACAGAG/CTCTGT	2	1																																																																																																																																																		3
ACAGAT/ATCTGT	2																																																																																																																																																			2
ACAGCC/CTGTGG		1																																																																																																																																																		1
ACAGCT/AGCTGT	1																																																																																																																																																			1
ACAGGC/CCTGTG		4			1																																																																																																																																															5
ACAGGG/CCCTGT	1																																																																																																																																																			1
ACAGTC/ACTGTG	2		1		1																																																																																																																																															4
ACAGTG/ACTGTC	3	1																																																																																																																																																		4
ACATAT/ATATGT	106	27	4	4	2	2	2	1																1					1																																																																																																																							150
ACATCC/ATGTGG		2																																																																																																																																																		2
ACATCT/AGATGT	2																																																																																																																																																			2
ACATGC/ATGTGC	27	5	2																																																																																																																																																	34
ACATGG/ATGTCC	1																																																																																																																																																			1
ACATGT/ACATGT	13	4	1																																																																																																																																																	18
ACCACG/CGTGGT		1																																																																																																																																																		1
ACCACT/AGTGGT	8	2																																																																																																																																																		10
ACCAGC/CTGGTG	4																																																																																																																																																			4
ACCAGT/ACTGGT	1																																																																																																																																																			1
ACCATC/ATGGTG	1	1	1	1						1																																																																																																																																										5
ACCATG/ATGGTC	1																																																																																																																																																			1
ACCCAT/ATGGGT	3																																																																																																																																																			3
ACCCCC/GGGGGT	1																																																																																																																																																			1
ACCCGC/CGGGTG		1	1																																																																																																																																																	2
ACCCTC/AGGGTG	1																																																																																																																																																			1
ACCGAG/CGGTCT	2	1																																																																																																																																																		3
ACCGAT/ATCGGT	1	1																																																																																																																																																		2
ACCGCC/CGGTGG		1	2																																																																																																																																																	3
ACCGCT/AGCGGT	9	3																																																																																																																																																		12
ACCGGG/CCCGGT	1																																																																																																																																																			1
ACCGTC/ACGGTG	1																																																																																																																																																			1
ACCGTG/ACGGTC	2	1																																																																																																																																																		3
ACCTAT/AGGTAT			1												1															1																																																																																																																						3
ACCTCC/AGGTGG	1																																																																																																																																																			1
ACCTCG/AGGTCG	1	1																																																																																																																																																		2
ACCTGC/AGGTGC	3																																																																																																																																																			3
ACGAGC/CGTGCT	1	1																																																																																																																																																		2
ACGAGG/CCTCGT		1																																																																																																																																																		1
ACGAGT/ACTCGT	1																																																																																																																																																			1
ACGATG/ATCGTC	6	2	2																																																																																																																																																	10
ACGCAG/CGTCTG	5			2																																																																																																																																																7
ACGCAT/ATGCGT	10	6	2	1																																																																																																																																																19
ACGCCC/CGTGGG	1																																																																																																																																																			1
ACGCCG/CGGCGT	2																																																																																																																																																			2
ACGGAG/CCGTCT	1																																																																																																																																																			1
ACGGCG/CCGTCG	1																																																																																																																																																			1
ACGGCT/AGCCGT	2																																																																																																																																																			2
ACGGGC/CCCGTG	3																																																																																																																																																			3
ACGTAG/ACGTCT		1																																																																																																																																																		1
ACGTAT/ACGTAT	9																																																																																																																																																			9
ACGTCC/ACGTGG	1																																																																																																																																																			1
ACGTGC/ACGTGC	2	1																																																																																																																																																		3
ACTAGC/AGTGCT	1																																																																																																																																																			1
ACTATC/AGTGAT			2																																																																																																																																																	2
ACTCCG/AGTCGG	1																																																																																																																																																			1
ACTCGC/AGTGCG	1																																																																																																																																																			1
ACTCTC/AGAGTG		1																																																																																																																																																		1
ACTGCC/AGTGGC	13	3	1	1																																																																																																																																																18
ACTGCG/AGTCGC	5	1				1																																																																																																																																														7
ACTGCT/AGCAGT	16	3	5																																																																																																																																																	24
ACTGGC/AGTGCC	1																																																																																																																																																			1
AGAGAT/ATCTCT	3	1		1			1																																																																																																																																													6
AGAGCC/CTCTGG					1																																																																																																																																															1
AGAGCG/CGCTCT	2																																																																																																																																																			2
AGAGCT/AGCTCT			1																																																																																																																																																	1
AGAGGC/CCTCTG	1	1																																																																																																																																																		2
AGAGGG/CCCTCT	3																																																																																																																																																			3
AGATAT/ATATCT	4	3	1																																																																																																																																																	8
AGATCC/ATCTGG	1																																																																																																																																																			1
AGATGC/ATCTGC	2																																																																																																																																																			2
AGATGG/ATCTCC	2	2																																																																																																																																																		4
AGCAGG/CCTGCT	3	1	2																																																																																																																																																	6
AGCATC/ATGCTG	4																																																																																																																																																			4
AGCATG/ATGCTC	2																																																																																																																																																			2
AGCCAT/ATGGCT	1																																																																																																																																																			1
AGCCGC/CGGCTG	1	1	1																																																																																																																																																	3
AGCGAT/ATCGCT	1																																																																																																																																																			1
AGCGGC/CCGCTG	12	2																																																																																																																																																		14
AGCGGG/CCCGCT	1																																																																																																																																																			1
AGCTAT/AGCTAT	1																																																																																																																																																			1
AGCTGC/AGCTGC	2																																																																																																																																																			2
AGGATG/ATCCTC	3																																																																																																																																																			3
AGGCCT/AGGCCT	1																																																																																																																																																			1
AGGGAT/ATCCCT	1																																																																																																																																																			1
AGGGCG/CCCTCG	1																																																																																																																																																			1
AGGGGC/CCCCTG	1																																																																																																																																																			1
AGGGGG/CCCCCT	2																																																																																																																																																			2
ATATGC/ATATGC	18	1	2																																																																																																																																																	21
ATCATG/ATCATG	1																																																																																																																																																			1
ATCCCC/ATGGGG	1																																																																																																																																																			1
ATCGCC/ATGGCG	5	1																																																																																																																																																		6
ATCGGC/ATGCCG	3	1		1																																																																																																																																																5
ATGCCC/ATGGGC		1	1																																																																																																																																																	2
ATGCGC/ATGCGC	4																																																																																																																																																			4
