Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_058219275.1/fasta/hub_GCA_058219275.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              5996
Total size of examined sequences (bp):           84304547
Total number of identified SSRs:                 20716
Number of SSR containing sequences:              1174
Number of sequences containing more than 1 SSR:  756
Number of SSRs present in compound formation:    2702


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	370
2	12253
3	4440
4	1055
5	1866
6	732

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	17	19	3	4	6	4	2	3	7	1	1	3	1	1	2		1	2	1	1	1	1			2					1								2				1			87
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	17	18	10	9	4	1	3	7	3	2	2	2	3	2	2	1		1	1	1			1	1												1									92
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	20	11	12	12	12	4	5	4	1	5	4		1	1	1	1		1																											95
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	12	8	7	6	3	3	3	5	1	2	2	1	2	3	1		3	1	1	1		1		3			1						1	1		1	1						1	96
AC	-	-	-	449	364	308	268	174	146	104	84	65	27	20	14	8	11	7	5	8	1	1								1																																2065
AG	-	-	-	184	134	112	77	54	31	29	17	14	6	7	2	3		1									1																																			672
AT	-	-	-	267	199	163	94	64	44	40	26	11	8	3	2																																															921
CA	-	-	-	294	270	238	203	131	109	96	67	48	28	16	12	11	11	1	4	1	2		3										1																													1546
CG	-	-	-	63	32	21	7	1	1																																																					125
CT	-	-	-	128	100	59	51	35	37	19	14	6	9	5	1		3	1	2		1					1		1																																		473
GA	-	-	-	173	127	93	57	46	37	12	18	14	9	2	2	2			3	1																																										596
GC	-	-	-	85	49	21	13	1																																																						169
GT	-	-	-	378	309	266	202	166	114	74	65	37	29	19	19	5	7	1	4	1	1	2	2				1	1																																		1703
TA	-	-	-	284	244	194	125	108	63	51	33	21	8	4	1	1				1					1																																					1139
TC	-	-	-	206	152	129	94	65	50	36	25	15	8	12	4	4	2		1		1	2								1																																807
TG	-	-	-	394	336	305	243	212	154	106	92	59	50	14	27	14	12	5	5	3	1	2			1	1			1																																	2037
AAC	-	-	57	28	22	19	6	4	1		1																																																			138
AAG	-	-	18	12	5	2	1	2											1																																											41
AAT	-	-	51	40	13	12	3	2	1		1																																																			123
ACA	-	-	54	29	20	5	4	4	1																																																					117
ACC	-	-	28	13	4	5		1	1																																																					52
ACG	-	-	31	23	7	2	3	2			1		1																																																	70
ACT	-	-	10	5	3	4	1																																																							23
AGA	-	-	16	10	3	3	1		1										1																										1																	36
AGC	-	-	53	31	14	8	8	1		1																																																				116
AGG	-	-	7	1	1	1																																																								10
AGT	-	-	7	2	4	1	2																																																							16
ATA	-	-	41	17	11	4	4	1	1		1																																																			80
ATC	-	-	45	10	6	1	1	2																																																						65
ATG	-	-	29	11	4	1	1																																																							46
ATT	-	-	32	10	7	5	7				1																																																			62
CAA	-	-	90	50	28	16	11	2	4	2	1	1																																																		205
CAC	-	-	22	11	7	1																																																								41
CAG	-	-	91	43	29	9	15	4	2				1						1																																											195
CAT	-	-	30	9	11	2	1	1		1																																																				55
CCA	-	-	22	12	4	2	1	1																																																						42
CCG	-	-	49	23	8	3	1																																																							84
CCT	-	-	5	4		2																																																								11
CGA	-	-	19	13	4	2																																																								38
CGC	-	-	37	21	12	4	1		1						1																																															77
CGG	-	-	31	20	10	4	1		1																																																					67
CGT	-	-	34	19	11	11	3	1																																																						79
CTA	-	-	14	3	1	2	2																																																							22
CTC	-	-	5	1	2																																																									8
CTG	-	-	52	33	14	11	12	6	3	1	2																																																			134
CTT	-	-	24	7	3	3	1		1																																																					39
GAA	-	-	44	12	8	2	4	1	1																			1																																		73
GAC	-	-	30	17	6	5	1		1																																																					60
GAG	-	-	7	2																																																										9
GAT	-	-	31	22	7	3																																																								63
GCA	-	-	66	41	17	13	10	4	2	1																																																				154
GCC	-	-	55	25	17	4	4	1																																																						106
GCG	-	-	56	27	8	6	5	2																																																						104
GCT	-	-	71	47	22	12	9	5	1	1		1																																																		169
GGA	-	-	11	3	2																																																									16
GGC	-	-	58	31	13	8	2	3																																																						115
GGT	-	-	17	14	5	3			2																																																					41
GTA	-	-	18	6	7	1	1																																																							33
GTC	-	-	32	6	7	1	1	1		1																																																				49
GTG	-	-	18	6	8	2				1																																																				35
GTT	-	-	64	28	28	8	5	1	2	1		1		1																																																139
TAA	-	-	30	9	7	7	3				1																																																			57
TAC	-	-	9	7	5	1			2																																																					24
TAG	-	-	7	4	3	3		1																																																						18
TAT	-	-	46	17	16	7	6	3	1																																																					96
TCA	-	-	42	15	7	5																																																								69
TCC	-	-	8		2	2																																																								12
TCG	-	-	34	13	7	3																																																								57
TCT	-	-	24	9	6	3	1			1	2							1	1														1																													49
TGA	-	-	32	18	2	1	1																																																							54
TGC	-	-	81	46	31	18	8	2	3	2	1	1	1	1				1																																												196
TGG	-	-	28	9	2	4	2	1	1																																																					47
TGT	-	-	75	45	27	19	7	3	2		1																																																			179
TTA	-	-	55	24	11	12	6	1				2																																																		111
TTC	-	-	38	20	5	3	1	1	1		1								1																												1															72
TTG	-	-	61	39	18	8	7	5	2	1																																																				141
AAAC	-	48	20	2	3	1		1																																																						75
AAAG	-	3		1																																																										4
AAAT	-	27	12	2	1																																																									42
AACA	-	6	1																																																											7
AACC	-										1																																																			1
AACG	-	7	11	4	4	1		1																																																						28
AAGA	-	5																																																												5
AAGG	-	1																																																												1
AAGT	-			1																																																										1
AATA	-	13	5	2																																																										20
AATC	-	8	1																																																											9
AATG	-	6		1																																																										7
ACAA	-	4	1	1																																																										6
ACAG	-	5	4	1																																																										10
ACAT	-	3	2		1																																																									6
ACCA	-	1																																																												1
ACCC	-	3																																																												3
ACCG	-	1																																																												1
ACGA	-	4	1			1																																																								6
ACGC	-	4	2	3																																																										9
ACGG	-	1	1	5																																																										7
ACGT	-	8	2																																																											10
ACTC	-	1																																																												1
ACTG	-	1																																																												1
AGAA	-	4	1																																																											5
AGAC	-	3	1																																																											4
AGAT	-	4	2		1																																																									7
AGCC	-	2	1	1				1																																																						5
AGCG	-	2	1																																																											3
AGCT	-		2																																																											2
AGGA	-	1																																																												1
AGGC	-										1																																																			1
AGGT	-		1																																																											1
AGTC	-	1																																																												1
AGTT	-	1																																																												1
ATAA	-	4	1	1																																																										6
ATAC	-	2								1																																																				3
ATAG	-	5		1					1																																																					7
ATCA	-	2	1																																																											3
ATCC	-	3	1	2	2																																																									8
ATCG	-	1																																																												1
ATCT	-	2	1	1																																																										4
ATGA	-	2																																																												2
ATGG	-	3																																																												3
ATGT	-	1	1																																																											2
ATTC	-	7																																																												7
ATTG	-		1																																																											1
ATTT	-	7	2																																																											9
CAAA	-	9	2																																																											11
CAAC	-		1	1																																																										2
CAAT	-	2																																																												2
CACC	-	1																																																												1
CACG	-	4	4																																																											8
CAGA	-	2			1																																																									3
CAGC	-	1	2	1																																																										4
CAGG	-	3			1																																																									4
CAGT	-	2	2																																																											4
CATA	-		1																																																											1
CATC	-	7	1																																																											8
CATT	-	1																																																												1
CCAC	-	2	2																																																											4
CCAG	-		1	1																																																										2
CCAT	-	1	2		1																																																									4
CCCA	-	2																																																												2
CCCG	-	6																																																												6
CCCT	-	1																																																												1
CCGA	-	3	1																																																											4
CCGC	-	1	1		1																																																									3
CCGG	-	2																																																												2
CCGT	-	5		2	1																																																									8
CCTG	-	3	1	1	1																																																									6
CCTT	-	1																																																												1
CGAA	-	1		1	2																																																									4
CGAG	-	5		1																																																										6
CGAT	-	1																																																												1
CGCA	-	3	1																																																											4
CGCC	-	4	1																																																											5
CGCT	-	3	2	2																																																										7
CGGA	-	1	1																																																											2
CGGC	-	1																																																												1
CGGG	-	1	1																																																											2
CGGT	-		2																																																											2
CGTA	-	7	1																																																											8
CGTC	-	2	1	1																																																										4
CGTG	-	3	1	1																																																										5
CGTT	-	8	8	2	1																																																									19
CTAA	-	1				1																																																								2
CTAT	-	2	1																																																											3
CTCA	-	2																																																												2
CTCG	-	5	2																																																											7
CTGC	-							1																																																						1
CTGG	-	1		1																																																										2
CTGT	-	4	2	1																																																										7
CTTC	-	3																																																												3
CTTT	-	1	1																																																											2
GAAA	-	4																																																												4
GAAC	-	6	1	1	2	1	1	1			1																																																			14
GAAG	-	1																																																												1
GAAT	-		1																																																											1
GACA	-	4	1																																																											5
GACG	-	1	1	1																																																										3
GACT	-	1																																																												1
GAGC	-	1	5	2																																																										8
GATA	-	5	1	2																																																										8
GATC	-	1	1																																																											2
GATG	-	5	2	1																																																										8
GATT	-	1																																																												1
GCAC	-	1	1																																																											2
GCAG	-	2																																																												2
GCCA	-	2	3	3	1																																																									9
GCCG	-	1																																																												1
GCCT	-			1																																																										1
GCGA	-	2																																																												2
GCGG	-			1																																																										1
GCGT	-	1																																																												1
GCTA	-	2		1																																																										3
GCTC	-	1																																																												1
GCTG	-	3		1																																																										4
GGAA	-	1																																																												1
GGAC	-	5			1																																																									6
GGAT	-	1	2	1		1																																																								5
GGCA	-	1	2	1	1																																																									5
GGCC	-	4																																																												4
GGCG	-	4	1	1																																																										6
GGCT	-	2																																																												2
GGGC	-	1	1		2																																																									4
GGGT	-	1	1																																																											2
GGTA	-		1	1																																																										2
GGTC	-	3																																																												3
GGTG	-	2																																																												2
GGTT	-	1																																																												1
GTAC	-	2	3	1																																																										6
GTAT	-	2																																																												2
GTCC	-	6	1			1																																																								8
GTCG	-		1	1																																																										2
GTCT	-	2	1																																																											3
GTGA	-	2																																																												2
GTGC	-	4	2		1	1																																																								8
GTTA	-	1	1																																																											2
GTTC	-	2	3	1	2		2																																																							10
GTTG	-	3	1																																																											4
GTTT	-	14	4	1		1				1																																																				21
TAAA	-	6	2		1		1																																																							10
TAAC	-					1																																																								1
TAAT	-		1																																																											1
TACA	-			1	1																																																									2
TACC	-	2																																																												2
TACG	-	8	1	2																																																										11
TACT	-	1																																																												1
TAGA	-	1																																																												1
TAGC	-	1	1																																																											2
TAGG	-		1																																																											1
TATG	-	1		1		1			1																																																					4
TATT	-	16	1																																																											17
TCAA	-	4																																																												4
TCAT	-	2	1			1																																																								4
TCCA	-	5	4		1																																																									10
TCCC	-	1																																																												1
TCCG	-	3	3	1	1																																																									8
TCCT	-		1																																																											1
TCGA	-	1																																																												1
TCGC	-	3	2																																																											5
TCGG	-	1																																																												1
TCGT	-	4	3	1																																																										8
TCTA	-	2	1																																																											3
TCTG	-	5	2						1																																																					8
TCTT	-	1																																																												1
TGAA	-		1																																																											1
TGAC	-	1																																																												1
TGAG	-	1	1																																																											2
TGAT	-	5																																																												5
TGCC	-	3																																																												3
TGCG	-	3	1		1																																																									5
TGGA	-	2	1		1																																																									4
TGGC	-	3	2	4	4																																																									13
TGGG	-	2																																																												2
TGTA	-	2	1																																																											3
TGTC	-	3	2	2	1																																																									8
TGTT	-	18	4																																																											22
TTAC	-	3																																																												3
TTAT	-	9	1			1																																																								11
TTCA	-	4	2																																																											6
TTCC	-		1																																																											1
TTCG	-	8	4	2	4	2	1	2		1																																																				24
TTCT	-	4																																																												4
TTGA	-	3	1																																																											4
TTGC	-	1	1																																																											2
TTGT	-	14	3	2																																																										19
TTTA	-	19	5	3		1	1																																																							29
TTTC	-	6	3																																																											9
TTTG	-	21	10	1		1																																																								33
AAAAC	120	15	8	1																																																										144
AAAAG	10																																																													10
AAAAT	66	13	3	3	1																																																									86
AAACA	23	3		1	1																																																									28
AAACC	3	2																																																												5
AAACG	8	4	2																																																											14
AAACT	2	1																																																												3
AAAGA	3	1																																																												4
AAATA	16	3		1																																																										20
AAATC	4																																																													4
AAATG	10	2																																																												12
AAATT	3																																																													3
AACAA	11		1																																																											12
AACAC	1																																																													1
AACAG	1																																																													1
AACAT	2																																																													2
AACCA	1																																																													1
AACCC	5	2																																																												7
AACCG	1																																																													1
AACCT	24	17	8	9	2	5		2	2	2	2	1																																																		74
AACGA	3		1							1																																																				5
AACGG	1																																																													1
AACGT		2																																																												2
AACTC	1																																																													1
AAGAA	3	1																																																												4
AAGAC	1																																																													1
AAGAT	5	3																																																												8
AAGCA	1																																																													1
AAGCC	1																																																													1
AAGCG	1																																																													1
AAGTA	1																																																													1
AAGTC	2																																																													2
AATAA	7		1																																																											8
AATAC	1	1																																																												2
AATAG	1																																																													1
AATAT	1																																																													1
AATCA					1																																																									1
AATGC			1																																																											1
AATGG	1																																																													1
AATTA	6																																																													6
AATTC	3	2																																																												5
AATTG	3																																																													3
AATTT	5																																																													5
ACAAA	4					1																																																								5
ACAAG	1																																																													1
ACACA	1	1																																																												2
ACACC	1																																																													1
ACACT	5																																																													5
ACAGT	1																																																													1
ACATC	1																																																													1
ACCAG	1																																																													1
ACCCA	1	1																																																												2
ACCGA	1																																																													1
ACCGC	2																																																													2
ACCGT	1																																																													1
ACCTA	2	1	2				2		1	1																							1																													10
ACGAA	4																																																													4
ACGAT	1																																																													1
ACGCA	1																																																													1
ACGGA		1																																																												1
ACGTC	2																																																													2
ACTAA	1																																																													1
ACTCC	1																																																													1
ACTCG	1																																																													1
ACTGA	1																																																													1
AGAAA	5																																																													5
AGAAC	1																																																													1
AGAAT	1						1																																																							2
AGACC		1																																																												1
AGACG		1																																																												1
AGAGT	1																																																													1
AGATA	1																																																													1
AGCCA	1	1																																																												2
AGCCG		1																																																												1
AGCTC	1																																																													1
AGCTG	2																																																													2
AGGCA	1																																																													1
AGGCG	1																																																													1
AGGGA	1																																																													1
AGGTG		2				1																																																								3
AGGTT	7	9	4	4		1					1		1														1																																			28
AGTAC	1																																																													1
AGTAT											1																																																			1
AGTCG	1																																																													1
AGTGC	1																																																													1
AGTTC	3																																																													3
ATAAA	13																																																													13
ATAAT	2																																																													2
ATACA	2																																																													2
ATACC	1																																																													1
ATACG	1																																																													1
ATAGG	1																																																													1
ATATA	4		1																																																											5
ATATC	2																																																													2
ATATT	1																																																													1
ATCAA	1		1																																																											2
ATCCA	1																																																													1
ATCCT	2	1																																																												3
ATCGC	1																																																													1
ATCTT	5	2																																																												7
ATGAA	3																																																													3
ATGAT		1																																																												1
ATGCA	1																																																													1
ATGGC	1																																																													1
ATGTG	1																																																													1
ATTAT	3																																																													3
ATTCA	1																																																													1
ATTCG	1																																																													1
ATTGA	3		1																																																											4
ATTGC	1																																																													1
ATTGT	1																																																													1
ATTTA	4																																																													4
ATTTC	3																																																													3
ATTTG	2		1																																																											3
ATTTT	22	2																																																												24
CAAAA	20	1	1																																																											22
CAAAG	1																																																													1
CAAAT	1	1																																																												2
CAACG	1																																																													1
CAAGC	1																																																													1
CAATC	1																																																													1
CAATT		1																																																												1
CACAC				1																																																										1
CACAG	2																																																													2
CACAT	1	1																																																												2
CACGA	1																																																													1
CAGAG	1																																																													1
CAGCA		1																																																												1
CAGCC	1																																																													1
CAGCG	1																																																													1
CAGTG	1																																																													1
CAGTT	1																																																													1
CATAT	1																																																													1
CATCA				4	1																																																									5
CATGC	1																																																													1
CATTC	1																																																													1
CATTG	1																																																													1
CATTT	2	1																																																												3
CCACC	1																																																													1
CCAGA	1																																																													1
CCATT	1																																																													1
CCCAA			1																																																											1
CCCCA	1	1																																																												2
CCCCG	2	1																																																												3
CCCGC	1																																																													1
CCCTG	1																																																													1
CCGAA	1																																																													1
CCGAG	2																																																													2
CCGCT	1																																																													1
CCGGC	1																																																													1
CCGTT	1																																																													1
CCTAA	12	6	5	3			1		3		1																		1																																	32
CCTCA					1																																																									1
CCTGC	1		1																																																											2
CCTGG	1	1																																																												2
CCTTT	1																																																													1
CGAAA	1																																																													1
CGAAC	1																																																													1
CGACC	1																																																													1
CGACG		1																																																												1
CGACT	1																																																													1
CGAGC	1																																																													1
CGAGT	1																																																													1
CGATG	6																																																													6
CGCAG	1																																																													1
CGCAT	1																																																													1
CGCCG	1																																																													1
CGCTG			1																																																											1
CGGCC		1																																																												1
CGGCT	1																																																													1
CGGGT		1																																																												1
CGGTA	1																																																													1
CGGTT	1																																																													1
CGTAC	1																																																													1
CGTAT			1																																																											1
CGTGC	1	1																																																												2
CGTTA	2																																																													2
CGTTT	7																																																													7
CTAAA	1																																																													1
CTAAC	14	6	2	5	2	1	1		2			1																1																																		35
CTAAT		2																																																												2
CTAGC			1																																																											1
CTAGG		1																																																												1
CTATA	1	1																																																												2
CTATG	1																																																													1
CTCCT	1																																																													1
CTCGA	1	1																																																												2
CTCGC		1		1																																																										2
CTCTT	1																																																													1
CTGCG	1																																																													1
CTGCT	1																																																													1
CTGGA	2																																																													2
CTGTT	1																																																													1
CTTAT	1																																																													1
CTTCT	2																																																													2
CTTGT	2																																																													2
CTTTT	5																																																													5
GAAAA	10																																																													10
GAAAC			1																																																											1
GAAAG	1																																																													1
GAAAT	4																																																													4
GAACA	2																																																													2
GAACC	1																																																													1
GAATC	1																																																													1
GAATG	2																																																													2
GAATT	1																																																													1
GACAC	1																																																													1
GACCG	1																																																													1
GACCT	1																																																													1
GACGG	1																																																													1
GACGT	1																																																													1
GACTG	1																																																													1
GAGAC		2																																																												2
GAGAG	1																																																													1
GAGTC	1																																																													1
GATAA	1																																																													1
GATAT	1																																																													1
GATGA	1																																																													1
GATTT	1																																																													1
GCAAT		1																																																												1
GCACA	1		1																																																											2
GCACC					1																																																									1
GCACG	1																																																													1
GCAGT	1																																																													1
GCATC	3		1																																																											4
GCATT		1																																																												1
GCCAC		1																																																												1
GCCAT	3																																																													3
GCCCC	1																																																													1
GCCGA	2																																																													2
GCCTT	2																																																													2
GCGAA	1																																																													1
GCGAT	2																																																													2
GCGCC		1																																																												1
GCGCT	1																																																													1
GCGGG		1																																																												1
GCGGT	1																																																													1
GCGTG	1																																																													1
GCGTT	1																																																													1
GCTGC	2																																																													2
GCTGT					1																																																									1
GCTTT	2	1																																																												3
GGAAC	1																																																													1
GGACG	2																																																													2
GGAGA	1																																																													1
GGATA		1																																																												1
GGATG	1																																																													1
GGATT	1																																																													1
GGCAA	2																																																													2
GGCCA	1		1																																																											2
GGCCC	1																																																													1
GGCCG		1																																																												1
GGCGA			1																																																											1
GGCGC	1																																																													1
GGCGT	1																																																													1
GGCTA		1																																																												1
GGCTG		1																																																												1
GGGAC			1																																																											1
GGGAG	2																																																													2
GGGCA		1																																																												1
GGGCT	2																																																													2
GGGGT	3																																																													3
GGGTG	1																																																													1
GGGTT	2																																																													2
GGTAG		1																																																												1
GGTCT	1																																																													1
GGTGA	1																																																													1
GGTGC	1																																																													1
GGTGT	1																																																													1
GGTTA	39	16	6	8	4	7	4	1	3			1	2			1											1																													1						94
GGTTC	1																																																													1
GGTTG	2	2																																																												4
GGTTT	3																																																													3
GTAAA	1																																																													1
GTACA	2																																																													2
GTACC	2																																																													2
GTACT	1																																																													1
GTATA	1																																																													1
GTATC	1	1																																																												2
GTCAA	1																																																													1
GTCCA						1																																																								1
GTCCC	1																																																													1
GTCCG	1																																																													1
GTCGC		1																																																												1
GTCTA		1																																																												1
GTCTT	1																																																													1
GTGAT		1	1	3	1																																																									6
GTGCT	1																																																													1
GTGGC	1																																																													1
GTGTA	1																																																													1
GTGTC	2																																																													2
GTTAG	5	2	2	3																																																										12
GTTAT	2																																																													2
GTTGA	1																																																													1
GTTGC	1																																																													1
GTTGG		2																																																												2
GTTTA	1																																																													1
GTTTC	4	3	1																																																											8
GTTTG	1																																																													1
GTTTT	28	10			1																																																									39
TAAAA	20	2																																																												22
TAAAT	3																																																													3
TAACC	9	3	7	4	4		1	1	1					2				1																																												33
TAAGA	1																																																													1
TAAGC	1																																																													1
TAATC	1																																																													1
TAATT	3																																																													3
TACAA		2																																																												2
TACAG	3						1																																																							4
TACAT	1																																																													1
TACCG			1																																																											1
TACCT	1																																																													1
TACGG	1																																																													1
TACTG	2																																																													2
TAGAA	3																																																													3
TAGCG	1	1																																																												2
TAGGA	1																																																													1
TAGGT	17	8	12	14	8	3		1																																	1					1																65
TAGTA	1	1																																																												2
TAGTT	2																																																													2
TATAA	2																																																													2
TATAT	4																																																													4
TATCT	2	1																																																												3
TATGC		1														1																																														2
TATTA	2																																																													2
TATTC	1																																																													1
TATTT	22	3	2																																																											27
TCAAA	1																																																													1
TCAAG	2																																																													2
TCAAT	3	1																																																												4
TCACA	1																																																													1
TCACG	1																																																													1
TCAGA		1																																																												1
TCATA	1																																																													1
TCATC	1																																																													1
TCATT	1																																																													1
TCCAA	1																																																													1
TCCAG	1																																																													1
TCCAT	1																																																													1
TCCCT	2																																																													2
TCGAA	1																																																													1
TCGAG		1																																																												1
TCGAT	2																																																													2
TCGGC	1																																																													1
TCGTA	2																																																													2
TCGTG	1																																																													1
TCGTT	3	1																																																												4
TCTAT	2																																																													2
TCTCT	1																																																													1
TCTGC		1																																																												1
TCTTC	2																																																													2
TCTTG	1																																																													1
TCTTT	2	1																																																												3
TGAAA	5																																																													5
TGAAC	1																																																													1
TGACA	2																																																													2
TGAGA	1	1																																																												2
TGCAT	1																																																													1
TGCCA	2																																																													2
TGCGC	1	1																																																												2
TGCGT	1																																																													1
TGCTA		1		1																																																										2
TGCTG	2																																																													2
TGGAA	1																																																													1
TGGAT	1																																																													1
TGGCT	2																																																													2
TGGGG	1																																																													1
TGGGT	1																																																													1
TGGTA	1																																																													1
TGTAA	1																																																													1
TGTAC	4																																																													4
TGTAT	2																																																													2
TGTCT	1																																																													1
TGTGC			1																																																											1
TGTGT	1																																																													1
TGTTA	1																																																													1
TGTTC	1																																																													1
TGTTT	26	1	2		1																																																									30
TTAAA	4	1																																																												5
TTAAT	4	1																																																												5
TTAGC	1																																																													1
TTAGG	5	1	3	3	2																																												1													15
TTAGT	1																																																													1
TTATC	14																																																													14
TTATG				1																																																										1
TTATT	10	1		1																																																										12
TTCAA	3																																																													3
TTCAG	3																																																													3
TTCAT	2		1																																																											3
TTCCA	1																																																													1
TTCGA	1																																																													1
TTCGG		1																																																												1
TTCGT	5	1																																																												6
TTCTC	1																																																													1
TTCTT	2																																																													2
TTGAA	2																																																													2
TTGAT	1																																																													1
TTGCA	1																																																													1
TTGCG	2																																																													2
TTGGA	1																																																													1
TTGGG	1																																																													1
TTGGT	1																																																													1
TTGTA	2																																																													2
TTGTC	1	1																																																												2
TTGTG	2																																																													2
TTGTT	25	5	1																																																											31
TTTAA	3	2																																																												5
TTTAG	1	1																																																												2
TTTAT	9	1																																																												10
TTTCA	4																																																													4
TTTCG	8	2	2																																																											12
TTTCT	9																																																													9
TTTGA	4																																																													4
TTTGC	5																																																													5
TTTGG	2																																																													2
TTTGT	26	6	1																																																											33
TTTTA	40	6		1																																																										47
TTTTC	19		2																																																											21
TTTTG	68	10	4	2	2	1																																																								87
AAAAAC	13	2																																																												15
AAAAAG	5																																																													5
AAAAAT	14	4	1		1																																																									20
AAAACA	8	1	1																																																											10
AAAACC		1																																																												1
AAAACT					1																																																									1
AAAATA	3																																																													3
AAAATC	1																																																													1
AAAATG	1																																																													1
AAACAA	1	2	1																																																											4
AAACAC	1																																																													1
AAACCA	1																																																													1
AAAGAA	2																																																													2
AAAGCC	1																																																													1
AAAGGC	1																																																													1
AAATAA	3																																																													3
AAATAG	1																																																													1
AAATCA	1																																																													1
AAATGG	1																																																													1
AACAAA	1																																																													1
AACAAT		1																																																												1
AACCAG	1																																																													1
AACTCG		1																																																												1
AACTGG	1																																																													1
AACTTC	1																																																													1
AAGAAA	2	1																																																												3
AAGACG	1																																																													1
AAGCAG	1																																																													1
AAGGCA	1																																																													1
AAGGCG	1																																																													1
AAGGCT	1																																																													1
AAGTGT	1																																																													1
AATAAA	3																																																													3
AATAAC	2																																																													2
AATACA	1																																																													1
AATACG		1																																																												1
AATAGA	1																																																													1
AATATA	1																																																													1
AATGGA		1																																																												1
AATGGT	1																																																													1
AATTCG	1																																																													1
AATTTC	2																																																													2
ACAAAA	3																																																													3
ACAAGA	1																																																													1
ACAAGG	1																																																													1
ACACAG	5																																																													5
ACACAT	1	1																																																												2
ACAGAG			1																																																											1
ACATAG		1																																																												1
ACATCT	1																																																													1
ACATGT	1																																																													1
ACATTC	1																																																													1
ACCAGC	1																																																													1
ACCATC	1																																																													1
ACCGTG	1																																																													1
ACGAAG	2																																																													2
ACGACC	1																																																													1
ACGGCT	1																																																													1
ACGTTC	1																																																													1
ACTACA		1																																																												1
ACTAGC			1																																																											1
ACTGCT	1			1																																																										2
AGAAAA	1																																																													1
AGACGA	1																																																													1
AGAGAT		1																																																												1
AGAGCA	2																																																													2
AGAGGG		1																																																												1
AGATGA	8																																																													8
AGATTT	1																																																													1
AGCACG	1																																																													1
AGCAGA		1																																																												1
AGCAGT	2																																																													2
AGCCAT			1																																																											1
AGCGGC	1																																																													1
AGCGGG	1																																																													1
AGCTCC		2																																																												2
AGGAAA	1																																																													1
AGGTGG	1																																																													1
AGTGGC		1																																																												1
ATAACA	1																																																													1
ATAACC	1																																																													1
ATACAC	2							2																																																						4
ATATAG	2																																																													2
ATATGA	1																																																													1
ATATTT	1	1																																																												2
ATCCGC	1																																																													1
ATCGTA	1																																																													1
ATCGTC	2																																																													2
ATCTCT	1																																																													1
ATGCCA		1																																																												1
ATGCGA	1																																																													1
ATGGAC	1																																																													1
ATGGAG	1																																																													1
ATGGCA	1																																																													1
ATGGTA	1																																																													1
ATGTAT	1																																																													1
ATGTGC	1																																																													1
ATTGCT	1																																																													1
ATTGGT	1																																																													1
ATTTCC	1																																																													1
ATTTTT	6	1																																																												7
CAAAAA	2																																																													2
CAAACG			1																																																											1
CAACAG	3			1																																																										4
CAACCG	1																																																													1
CAACTT	1																																																													1
CAATTG	1																																																													1
CACATA			1																																																											1
CACCAG	1																																																													1
CACCAT	2																																																													2
CACCTA			1																																																											1
CACGCA		1																																																												1
CACGGG	1																																																													1
CACGTC		1																																																												1
CACTCG	1																																																													1
CAGACG	1																																																													1
CAGCAA	3																																																													3
CAGCCA		1																																																												1
CAGCGG	1																																																													1
CAGCTC	1																																																													1
CAGCTG	1																																																													1
CAGCTT				1																																																										1
CAGGGT	1																																																													1
CATACA	3	4																																																												7
CATAGC	1																																																													1
CATATA	1																																																													1
CATCAG	1																																																													1
CATCGA	1																																																													1
CATTTC	1																																																													1
CATTTT	1																																																													1
CCACTG	1																																																													1
CCATTC	1																																																													1
CCATTG	2																																																													2
CCCACC		1																																																												1
CCCATG	1																																																													1
CCCCCA	1																																																													1
CCCCTG	1																																																													1
CCGAAA	1																																																													1
CCGATG		1																																																												1
CCGCAT	1																																																													1
CCGCGG	1																																																													1
CCGGCC	1																																																													1
CCGGCG		1																																																												1
CCGGCT	1																																																													1
CCGTCG	1																																																													1
CCGTGT	1																																																													1
CCTCAG	1																																																													1
CCTCCC	1																																																													1
CCTCGT	1																																																													1
CCTTTA	1																																																													1
CGAAAA	1	1																																																												2
CGAAGA	1																																																													1
CGAATT	1																																																													1
CGACGC	1	1																																																												2
CGACGG	1																																																													1
CGACGT	1																																																													1
CGATAC	1																																																													1
CGATGG	1																																																													1
CGATTA		1																																																												1
CGATTG	1																																																													1
CGCACA	2																																																													2
CGCAGA	1																																																													1
CGCCCT	1																																																													1
CGCCGT	1																																																													1
CGCCTC	1			1																																																										2
CGCGGA	1																																																													1
CGCTGA	1																																																													1
CGCTGC	1																																																													1
CGGCAG	1																																																													1
CGGCGA	1																																																													1
CGGCGT	1																																																													1
CGGCTG	1																																																													1
CGGGCA	1																																																													1
CGGGCG			1																																																											1
CGGGTG	2																																																													2
CGGGTT	1																																																													1
CGGTCC	1																																																													1
CGGTGG	1																																																													1
CGGTTT	1																																																													1
CGTATG	1																																																													1
CGTCAA	1																																																													1
CGTCGA	1																																																													1
CGTGGC		2																																																												2
CGTGGT	1																																																													1
CGTGTG	1																																																													1
CGTGTT	1																																																													1
CGTTGT	1		1																																																											2
CGTTTT	3																																																													3
CTACCA	1																																																													1
CTACTT		1																																																												1
CTATGT	1																																																													1
CTATTT	2																																																													2
CTCAAC	1																																																													1
CTCCAC	1																																																													1
CTCCAT	1																																																													1
CTCCGC	1																																																													1
CTCCGG	2																																																													2
CTCTCG	2		1																																																											3
CTCTGT	1																																																													1
CTGACG	1																																																													1
CTGCCA			1																																																											1
CTGCCG	1																																																													1
CTGGCA	1																																																													1
CTGGCG	1																																																													1
CTGGTT	1																																																													1
CTGTGG	1																																																													1
CTGTGT	2																																																													2
CTGTTG	1																																																													1
CTTACA	2																																																													2
CTTATG	1																																																													1
CTTCGC	1																																																													1
CTTCGT	1																																																													1
CTTGGT		1																																																												1
CTTTAA	1																																																													1
CTTTAG	1																																																													1
CTTTCT	1																																																													1
CTTTGG	1																																																													1
GAAAAA	3																																																													3
GAAAAG	1																																																													1
GAAAAT	1																																																													1
GAAACA	1																																																													1
GAAAGA	1																																																													1
GAAATC	1																																																													1
GAACCA	1																																																													1
GAACTT	1																																																													1
GAAGAT			1																																																											1
GAAGCC	1																																																													1
GAAGCT	1																																																													1
GAATAC		1																																																												1
GAATTC	1																																																													1
GACATC	1																																																													1
GACGAA	1																																																													1
GACGAG		1																																																												1
GACGAT	1																																																													1
GACGGA	1																																																													1
GACGTG	1																																																													1
GACTAC	1																																																													1
GACTAT	1																																																													1
GAGAAC	1																																																													1
GAGCCA	1																																																													1
GAGCTT	1																																																													1
GAGGAT	1																																																													1
GAGTTC	1																																																													1
GATGAC	2																																																													2
GATTCT	1																																																													1
GATTTA		1																																																												1
GATTTT	1																																																													1
GCAAAA	1																																																													1
GCAACA	2	1																																																												3
GCAACG	1																																																													1
GCAAGT	1																																																													1
GCAATG	1																																																													1
GCACCA	1																																																													1
GCACCG	2																																																													2
GCACTC	1																																																													1
GCACTG	1																																																													1
GCAGAA	1																																																													1
GCAGCG			1																																																											1
GCATCC	1	1																																																												2
GCATTT		1																																																												1
GCCAAT	1																																																													1
GCCACG		1																																																												1
GCCAGT		1																																																												1
GCCATT	1																																																													1
GCCCGC	1																																																													1
GCCCGG	1																																																													1
GCCGAC	1																																																													1
GCCGAG	1																																																													1
GCCGCA	1																																																													1
GCCGCG	2																																																													2
GCCGCT	1	1																																																												2
GCCGGG	1																																																													1
GCCGTC	1																																																													1
GCCGTG		1																																																												1
GCCGTT	2																																																													2
GCGAAC	1																																																													1
GCGGCA	2																																																													2
GCGGCC	1																																																													1
GCGGCT	2																																																													2
GCGGGC	1	1																																																												2
GCGGTA	1																																																													1
GCGTCC	3																																																													3
GCGTCG	1																																																													1
GCGTGT	1																																																													1
GCGTTG		1																																																												1
GCTACG	1																																																													1
GCTCAC	1																																																													1
GCTCTC	1	1																																																												2
GCTGCC	1																																																													1
GCTGCG	1																																																													1
GCTGGA	1																																																													1
GCTGGT									1																																																					1
GCTGTC	1																																																													1
GCTGTT	1																																																													1
GCTTTT								1																																																						1
GGAACG	1																																																													1
GGAAGA	1																																																													1
GGAATG		1																																																												1
GGAGCT		2																																																												2
GGAGGT	2																																																													2
GGATCA	1																																																													1
GGATTT	1																																																													1
GGCAAT	1																																																													1
GGCAGC	1																																																													1
GGCAGG	1																																																													1
GGCATT	1																																																													1
GGCGAT	1																																																													1
GGCGGA	2																																																													2
GGCGTA	1																																																													1
GGCTAC	1																																																													1
GGGAAT	1																																																													1
GGGAGG	1																																																													1
GGGCAC	1																																																													1
GGGCGT	1																																																													1
GGGGTG	1																																																													1
GGTGAT	2																																																													2
GGTGCC	2																																																													2
GGTGCT	3																																																													3
GGTTGC	1	1																																																												2
GGTTTC	1																																																													1
GTAACT	1																																																													1
GTAGCA	1																																																													1
GTAGGT	2																																																													2
GTATCG	1																																																													1
GTCGCC		1																																																												1
GTCGCT	1																																																													1
GTCGTG			1																																																											1
GTGCGT	1																																																													1
GTGGAT	2																																																													2
GTGGCA	1	1																																																												2
GTGGCG		1																																																												1
GTGGGC	2																																																													2
GTGGTA	2		1																																																											3
GTGGTC		1																																																												1
GTGGTT	1																																																													1
GTGTAC		1																																																												1
GTGTAG	1																																																													1
GTGTAT	2																																																													2
GTGTCC	1																																																													1
GTGTCT	1																																																													1
GTGTGC	2																																																													2
GTGTGG	1																																																													1
GTGTTA		1																																																												1
GTTCAA	1																																																													1
GTTCAG	1																																																													1
GTTGAT	1																																																													1
GTTGCG	1																																																													1
GTTGCT		1																																																												1
GTTGTC	1																																																													1
GTTTTC	3																																																													3
GTTTTT	4																																																													4
TAAAAA	1																																																													1
TAACTA	1																																																													1
TACACA			2																																																											2
TACATT	1																																																													1
TACGTG		1																																																												1
TACGTT		1																																																												1
TACTAG		1																																																												1
TAGAGG	1																																																													1
TAGATC	1																																																													1
TAGTAA		1																																																												1
TAGTGA	1																																																													1
TAGTGT	1																																																													1
TATACA	1																																																													1
TATATG	1	1																																																												2
TATATT									1																																																					1
TATCAA	1																																																													1
TATCTG	1																																																													1
TATGGA	1																																																													1
TATGTG	5																																																													5
TATGTT	1																																																													1
TATTAC			1																																																											1
TATTTA	1																																																													1
TATTTC	2																																																													2
TATTTG	1																																																													1
TATTTT	2	2																																																												4
TCACAG	1																																																													1
TCACCA	1																																																													1
TCACTC	1																																																													1
TCACTG	1																																																													1
TCAGAA	1																																																													1
TCATCC	1	1																																																												2
TCATCG	1																																																													1
TCCACC	1																																																													1
TCCATG	2																																																													2
TCCGAT	1																																																													1
TCCGCC	1																																																													1
TCCTCG	1																																																													1
TCGCCC	1																																																													1
TCGCGT	1																																																													1
TCGCTC	1																																																													1
TCGTAT		1																																																												1
TCGTCT	1																																																													1
TCGTTC	1																																																													1
TCTCAC	1																																																													1
TCTCGA	1																																																													1
TCTCTG	1																																																													1
TCTGCT	1																																																													1
TCTGTC	1																																																													1
TCTGTG				1																																																										1
TCTTCA	1																																																													1
TCTTCG	1	1		1																																																										3
TCTTGG			2																																																											2
TCTTTC	1																																																													1
TCTTTT	1																																																													1
TGATCT	1																																																													1
TGATGT		1																																																												1
TGATTT	1																																																													1
TGCCCG		1																																																												1
TGCCTA	1																																																													1
TGCCTC	1																																																													1
TGCGAA		1																																																												1
TGCTGA			1				1																																																							2
TGCTGG	2																																																													2
TGCTGT	2	3																																																												5
TGGACG	1																																																													1
TGGCAT	1																																																													1
TGGCCT	1																																																													1
TGGGCA	1																																																													1
TGGGGG	2																																																													2
TGGGTG	1																																																													1
TGGTGA	1																																																													1
TGGTGC	1																																																													1
TGGTGT							1																																																							1
TGTATA		1																																																												1
TGTATG	4																																																													4
TGTCCG	3																																																													3
TGTCGT	1																																																													1
TGTGAC	1																																																													1
TGTGTA		1	2																																																											3
TGTGTC	3																																																													3
TGTGTT		1																																																												1
TGTTGC		1																																																												1
TGTTGG	1																																																													1
TGTTTG	1																																																													1
TGTTTT	4																																																													4
TTAACG		1																																																												1
TTAATT	1																																																													1
TTACCA	1																																																													1
TTACTG	1																																																													1
TTATGT		1																																																												1
TTATTG	1																																																													1
TTATTT	3	1																																																												4
TTCATT	1																																																													1
TTCCCA	1																																																													1
TTCCTA	1																																																													1
TTCGCC	1																																																													1
TTCGGT	1																																																													1
TTCGTC	1																																																													1
TTCTTG	1																																																													1
TTCTTT	2			1																																																										3
TTGACG	2																																																													2
TTGCTG	2																																																													2
TTGGCG	1																																																													1
TTGTTT	2	1																																																												3
TTTAAA	1	1																																																												2
TTTACG	1																																																													1
TTTACT	1																																																													1
TTTATT	3	1																																																												4
TTTCAT	1																																																													1
TTTCCA	1																																																													1
TTTCGT	1																																																													1
TTTCTC	6																																																													6
TTTCTT	1																																																													1
TTTGAC			1																																																											1
TTTGAT	1																																																													1
TTTGCA	1																																																													1
TTTGCC	2																																																													2
TTTGGC	1																																																													1
TTTGTT	5	1																																																												6
TTTTAT	3																																																													3
TTTTCA	1																																																													1
TTTTCC	1																																																													1
TTTTCG	1	1																																																												2
TTTTCT	3	1																																																												4
TTTTGA	2																																																													2
TTTTGC	1																																																													1
TTTTGG		1																																																												1
TTTTGT	6	3																																																												9
TTTTTA	2	1																																																												3
TTTTTC	3																																																													3
TTTTTG	15	2																																																												17

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	38	31	11	11	12	7	5	6	12	2	3	5	2	3	5	1	1	5	2	2	2	1	1		5			1		1				1	1		1	3				1		1	183
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	37	29	22	21	16	5	8	11	4	7	6	2	4	3	3	2		2	1	1			1	1												1									187
AC/GT	-	-	-	1515	1279	1117	916	683	523	380	308	209	134	69	72	38	41	14	18	13	5	5	5		1	1	1	1	1	1			1																													7351
AG/CT	-	-	-	691	513	393	279	200	155	96	74	49	32	26	9	9	5	2	6	1	2	2				1	1	1		1																																2548
AT/AT	-	-	-	551	443	357	219	172	107	91	59	32	16	7	3	1				1					1																																					2060
CG/CG	-	-	-	148	81	42	20	2	1																																																					294
AAC/GTT	-	-	401	219	143	75	40	19	12	4	3	2		1																																																919
AAG/CTT	-	-	164	70	30	16	9	4	4	1	3							1	4									1					1												1		1															310
AAT/ATT	-	-	255	117	65	47	29	7	3		4	2																																																		529
ACC/GGT	-	-	135	65	30	17	3	3	4	1																																																				258
ACG/CGT	-	-	180	91	42	24	8	4	1	1	1		1																																																	353
ACT/AGT	-	-	65	27	23	12	6	1	2																																																					136
AGC/CTG	-	-	414	241	127	71	62	22	11	6	3	2	2	1				1	1																																											964
AGG/CCT	-	-	43	11	7	5																																																								66
ATC/ATG	-	-	209	85	37	13	4	3		1																																																				352
CCG/CGG	-	-	286	147	68	29	14	6	2						1																																															553
AAAC/GTTT	-	134	45	7	3	3		1		1																																																				194
AAAG/CTTT	-	28	5	1																																																										34
AAAT/ATTT	-	101	29	8	2	2	2																																																							144
AACC/GGTT	-	5	2	1							1																																																			9
AACG/CGTT	-	40	31	12	15	5	4	4		1	1																																																			113
AACT/AGTT	-	3	1			2																																																								6
AAGC/CTTG	-	1	1																																																											2
AAGG/CCTT	-	8	2																																																											10
AAGT/ACTT	-	4		1																																																										5
AATC/ATTG	-	25	4																																																											29
AATG/ATTC	-	22	5	1		1																																																								29
AATT/AATT	-		1																																																											1
ACAG/CTGT	-	28	13	4	2				1																																																					48
ACAT/ATGT	-	11	5	2	2	1			1	1																																																				23
ACCC/GGGT	-	13	3																																																											16
ACCG/CGGT	-	8	4	1																																																										13
ACCT/AGGT	-	2	3	1																																																										6
ACGC/CGTG	-	23	12	4	2	1																																																								42
ACGG/CCGT	-	24	8	10	3	1																																																								46
ACGT/ACGT	-	25	7	3																																																										35
ACTC/AGTG	-	6	1																																																											7
ACTG/AGTC	-	6	2																																																											8
AGAT/ATCT	-	21	6	4	1				1																																																					33
AGCC/CTGG	-	14	9	12	5			1																																																						41
AGCG/CGCT	-	22	12	5																																																										39
AGCT/AGCT	-	3	3	1																																																										7
AGGC/CCTG	-	12	3	3	3			1			1																																																			23
AGGG/CCCT	-	2																																																												2
ATCC/ATGG	-	27	13	4	5	1																																																								50
ATCG/ATCG	-	4	1																																																											5
CCCG/CGGG	-	17	5	2	3																																																									27
CCGG/CCGG	-	8																																																												8
AAAAC/GTTTT	351	51	18	4	5	2																																																								431
AAAAG/CTTTT	68	3	2																																																											73
AAAAT/ATTTT	225	31	6	6	1																																																									269
AAACC/GGTTT	11	2																																																												13
AAACG/CGTTT	43	11	7							1																																																				62
AAACT/AGTTT	9	2																																																												11
AAAGC/CTTTG	9	1																																																												10
AAAGG/CCTTT	2																																																													2
AAAGT/ACTTT	2																																																													2
AAATC/ATTTG	15	1	2		1																																																									19
AAATG/ATTTC	34	3	1																																																											38
AAATT/AATTT	35	4																																																												39
AACAC/GTGTT	5	1																																																												6
AACAG/CTGTT	6																																																													6
AACAT/ATGTT	5			1																																																										6
AACCC/GGGTT	12	7	1																																																											20
AACCG/CGGTT	7	1																																																												8
AACCT/AGGTT	134	69	51	53	22	17	9	5	12	3	4	3	3	2		1		1									2	1	1				1								1					1			1							1						398
AACGC/CGTTG	7																																																													7
AACGG/CCGTT	3	1																																																												4
AACGT/ACGTT	2	2																																																												4
AACTC/AGTTG	2																																																													2
AACTG/AGTTC	9																																																													9
AAGAC/CTTGT	8	1																																																												9
AAGAG/CTCTT	7																																																													7
AAGAT/ATCTT	30	6																																																												36
AAGCC/CTTGG	5	1																																																												6
AAGCG/CGCTT	2																																																													2
AAGCT/AGCTT	2																																																													2
AAGGC/CCTTG	5																																																													5
AAGGG/CCCTT	3																																																													3
AAGGT/ACCTT	1																																																													1
AAGTC/ACTTG	5																																																													5
AATAC/ATTGT	8	3																																																												11
AATAG/ATTCT	8						1																																																							9
AATAT/ATATT	19		1																																																											20
AATCC/ATTGG	6																																																													6
AATCG/ATTCG	6																																																													6
AATCT/AGATT	1	2																																																												3
AATGC/ATTGC	5	2	1																																																											8
AATGG/ATTCC	8																																																													8
AATGT/ACATT	2																																																													2
AATTC/AATTG	19	4	1																																																											24
ACACC/GGTGT	2			1																																																										3
ACACG/CGTGT	5																																																													5
ACACT/AGTGT	6																																																													6
ACAGC/CTGTG	6	1	2		1																																																									10
ACAGT/ACTGT	14						1																																																							15
ACATC/ATGTG	4	2	1	7	2																																																									16
ACATG/ATGTC	2																																																													2
ACCAG/CTGGT	3	1																																																												4
ACCAT/ATGGT	2																																																													2
ACCCC/GGGGT	7	1																																																												8
ACCCG/CGGGT	1	1																																																												2
ACCCT/AGGGT		1																																																												1
ACCGC/CGGTG	4				1																																																									5
ACCGG/CCGGT	2																																																													2
ACCGT/ACGGT	6		1																																																											7
ACCTC/AGGTG	1	2			1	1																																																								5
ACCTG/AGGTC	1																																																													1
ACGAG/CGTCT		3																																																												3
ACGAT/ATCGT	5	1	1																																																											7
ACGCC/CGTGG	3	1																																																												4
ACGCG/CGCGT		2																																																												2
ACGCT/AGCGT	1	1																																																												2
ACGGC/CCGTG	2	1																																																												3
ACGGG/CCCGT	4		1																																																											5
ACGTC/ACGTG	4																																																													4
ACTAG/AGTCT		1																																																												1
ACTAT/AGTAT	3	2									1																																																			6
ACTCC/AGTGG	1																																																													1
ACTCG/AGTCG	6	2																																																												8
ACTCT/AGAGT	1																																																													1
ACTGC/AGTGC	3																																																													3
ACTGG/AGTCC	4					1																																																								5
AGAGC/CTCTG	2	1																																																												3
AGAGG/CCTCT	3																																																													3
AGATC/ATCTG		1																																																												1
AGATG/ATCTC	3	1																																																												4
AGCAT/ATGCT	1	2		1												1																																														5
AGCCC/CTGGG	3	1																																																												4
AGCCG/CGGCT	7	1																																																												8
AGCCT/AGGCT		2	1																																																											3
AGCGC/CGCTG	7	1	1																																																											9
AGCGG/CCGCT	1																																																													1
AGCTC/AGCTG	3																																																													3
AGGAT/ATCCT	4	2																																																												6
AGGCC/CCTGG	2	1	1																																																											4
AGGCG/CCTCG	1	1	1	1																																																										4
AGGGC/CCCTG	2	1	1																																																											4
AGGGG/CCCCT	2																																																													2
ATATC/ATATG	5	1																																																												6
ATCCC/ATGGG	1																																																													1
ATCGC/ATGCG	13		1																																																											14
ATGCC/ATGGC	7																																																													7
CCCCG/CGGGG	4	2																																																												6
CCCGG/CCGGG	2	2																																																												4
CCGCG/CGCGG	2	1																																																												3
AAAAAC/GTTTTT	64	12	2																																																											78
AAAAAG/CTTTTT	23	2		1																																																										26
AAAAAT/ATTTTT	43	10	1		1																																																									55
AAAACC/GGTTTT	1	2																																																												3
AAAACG/CGTTTT	9	2																																																												11
AAAACT/AGTTTT					1																																																									1
AAAAGC/CTTTTG	2							1																																																						3
AAAAGG/CCTTTT	3																																																													3
AAAAGT/ACTTTT	1																																																													1
AAAATC/ATTTTG	7																																																													7
AAAATG/ATTTTC	6																																																													6
AAAATT/AATTTT	1																																																													1
AAACAC/GTGTTT	2	1																																																												3
AAACAG/CTGTTT	1																																																													1
AAACAT/ATGTTT	1	1																																																												2
AAACCG/CGGTTT	4																																																													4
AAACGC/CGTTTG			1																																																											1
AAACGT/ACGTTT	1	1																																																												2
AAAGAG/CTCTTT	9																																																													9
AAAGCC/CTTTGG	3																																																													3
AAAGCT/AGCTTT	1																																																													1
AAAGGC/CCTTTG	4																																																													4
AAAGGT/ACCTTT	1																																																													1
AAAGTC/ACTTTG			1																																																											1
AAAGTT/AACTTT	1																																																													1
AAATAC/ATTTGT	2																																																													2
AAATAG/ATTTCT	6																																																													6
AAATAT/ATATTT	3	1							1																																																					5
AAATCC/ATTTGG	1																																																													1
AAATCG/ATTTCG	1																																																													1
AAATCT/AGATTT	1	1																																																												2
AAATGC/ATTTGC	1	1																																																												2
AAATGG/ATTTCC	4	1																																																												5
AAATGT/ACATTT	1																																																													1
AAATTG/AATTTC	2																																																													2
AAATTT/AAATTT	1	1																																																												2
AACAAG/CTTGTT	2																																																													2
AACAAT/ATTGTT	4	1																																																												5
AACACC/GGTGTT	1						1																																																							2
AACACG/CGTGTT	1																																																													1
AACACT/AGTGTT	1	1																																																												2
AACAGC/CTGTTG	14	6		1																																																										21
AACAGT/ACTGTT	1																																																													1
AACATC/ATGTTG	1	1																																																												2
AACCAC/GGTTGT	1																																																													1
AACCAG/CTGGTT	3																																																													3
AACCAT/ATGGTT	1																																																													1
AACCCG/CGGGTT	1																																																													1
AACCGC/CGGTTG	3	1																																																												4
AACCTC/AGGTTG	1																																																													1
AACCTG/AGGTTC	1																																																													1
AACGAC/CGTTGT	3		1																																																											4
AACGAG/CGTTCT	2																																																													2
AACGCC/CGTTGG	1	1																																																												2
AACGCG/CGCGTT	2																																																													2
AACGGC/CCGTTG	3																																																													3
AACGGG/CCCGTT	1																																																													1
AACGTC/ACGTTG	3																																																													3
AACGTG/ACGTTC	1																																																													1
AACGTT/AACGTT		1																																																												1
AACTAC/AGTTGT		1																																																												1
AACTAT/AGTTAT	1																																																													1
AACTCG/AGTTCG	1	1																																																												2
AACTGG/AGTTCC	1																																																													1
AACTGT/ACAGTT	1																																																													1
AACTTC/AAGTTG	2																																																													2
AACTTG/AAGTTC	2																																																													2
AAGACC/CTTGGT		1	2																																																											3
AAGACG/CGTCTT	10	1		1																																																										12
AAGAGC/CTCTTG	2																																																													2
AAGAGG/CCTCTT	1																																																													1
AAGATC/ATCTTG	1																																																													1
AAGATG/ATCTTC	9		1																																																											10
AAGCAG/CTGCTT	3	1																																																												4
AAGCAT/ATGCTT	1																																																													1
AAGCCG/CGGCTT	1																																																													1
AAGCTC/AGCTTG	1																																																													1
AAGCTG/AGCTTC	1			1																																																										2
AAGGAC/CCTTGT	1																																																													1
AAGGCC/CCTTGG	1																																																													1
AAGGCG/CCTTCG	3																																																													3
AAGGCT/AGCCTT	1																																																													1
AAGTAG/ACTTCT		1																																																												1
AAGTGC/ACTTGC	1																																																													1
AAGTGT/ACACTT	3																																																													3
AATACC/ATTGGT	1																																																													1
AATACG/ATTCGT		3																																																												3
AATAGC/ATTGCT	1																																																													1
AATAGG/ATTCCT	1																																																													1
AATAGT/ACTATT		1	1																																																											2
AATATC/ATATTG	1																																																													1
AATATG/ATATTC	1																																																													1
AATCAG/ATTCTG	2																																																													2
AATCGC/ATTGCG	1																																																													1
AATCGG/ATTCCG	1																																																													1
AATCGT/ACGATT	1	1																																																												2
AATGCC/ATTGGC	3	1																																																												4
AATGCG/ATTCGC	1	1																																																												2
AATGGC/ATTGCC	6																																																													6
AATGGG/ATTCCC	3	1																																																												4
AATGGT/ACCATT	3																																																													3
AATGTG/ACATTC	1																																																													1
AATTCG/AATTCG	3																																																													3
AATTGC/AATTGC	1																																																													1
ACACAG/CTGTGT	11			1																																																										12
ACACAT/ATGTGT	17	6	5					2																																																						30
ACACCC/GGGTGT	2																																																													2
ACACCT/AGGTGT	3		1																																																											4
ACACGC/CGTGTG	7	1																																																												8
ACACGG/CCGTGT	5																																																													5
ACACGT/ACGTGT		2																																																												2
ACAGAG/CTCTGT	3		1																																																											4
ACAGAT/ATCTGT	1																																																													1
ACAGCC/CTGTGG	1	1																																																												2
ACAGCG/CGCTGT	2																																																													2
ACAGTC/ACTGTG	2																																																													2
ACAGTG/ACTGTC	1																																																													1
ACATAG/ATGTCT	1	1																																																												2
ACATAT/ATATGT	4	2																																																												6
ACATCC/ATGTGG	2																																																													2
ACATCG/ATGTCG	2																																																													2
ACATCT/AGATGT	1																																																													1
ACATGC/ATGTGC	1																																																													1
ACATGG/ATGTCC	3																																																													3
ACATGT/ACATGT	1																																																													1
ACCACG/CGTGGT	2	1	1																																																											4
ACCACT/AGTGGT	3		1																																																											4
ACCAGC/CTGGTG	9								1																																																					10
ACCATC/ATGGTG	7																																																													7
ACCCCC/GGGGGT	4	1																																																												5
ACCCGC/CGGGTG	2																																																													2
ACCCTG/AGGGTC	1																																																													1
ACCGAT/ATCGGT	2																																																													2
ACCGCC/CGGTGG	1	1																																																												2
ACCGCT/AGCGGT	1																																																													1
ACCGGC/CCGGTG	4																																																													4
ACCGGG/CCCGGT	1																																																													1
ACCGTG/ACGGTC	1																																																													1
ACCTCC/AGGTGG	5																																																													5
ACCTCT/AGAGGT	1																																																													1
ACGACT/AGTCGT	1																																																													1
ACGAGC/CGTGCT	1																																																													1
ACGAGG/CCTCGT	2	1																																																												3
ACGATG/ATCGTC	6																																																													6
ACGCAG/CGTCTG	2																																																													2
ACGCAT/ATGCGT	1																																																													1
ACGCCC/CGTGGG	3																																																													3
ACGCCG/CGGCGT	4	1																																																												5
ACGCCT/AGGCGT	1																																																													1
ACGCGG/CCGCGT	4																																																													4
ACGCTC/AGCGTG	1																																																													1
ACGCTG/AGCGTC	2																																																													2
ACGGAG/CCGTCT	1																																																													1
ACGGCC/CCGTGG		4																																																												4
ACGGCG/CCGTCG	5	1																																																												6
ACGGCT/AGCCGT	3																																																													3
ACGGGC/CCCGTG	3	1																																																												4
ACGTCC/ACGTGG	2	1																																																												3
ACGTCG/ACGTCG	2																																																													2
ACTAGC/AGTGCT			1																																																											1
ACTAGT/ACTAGT		1																																																												1
ACTATC/AGTGAT	1																																																													1
ACTATG/AGTCAT	1																																																													1
ACTCGC/AGTGCG	2																																																													2
ACTCTC/AGAGTG	2																																																													2
ACTGCC/AGTGGC	2	2	1																																																											5
ACTGCT/AGCAGT	4			1																																																										5
ACTGGC/AGTGCC	2	1																																																												3
AGAGAT/ATCTCT	1	1																																																												2
AGAGCC/CTCTGG	1																																																													1
AGAGCG/CGCTCT	4	1	1																																																											6
AGAGGC/CCTCTG	1																																																													1
AGAGGG/CCCTCT		1																																																												1
AGATAT/ATATCT	2																																																													2
AGATCG/ATCTCG	1																																																													1
AGATCT/AGATCT	1																																																													1
AGATGG/ATCTCC	2																																																													2
AGCATC/ATGCTG	1		1				1																																																							3
AGCCAT/ATGGCT	1		1																																																											2
AGCCGC/CGGCTG	5																																																													5
AGCCGG/CCGGCT	3																																																													3
AGCCTC/AGGCTG	1																																																													1
AGCGCC/CGCTGG	1																																																													1
AGCGGC/CCGCTG	10	1	1																																																											12
AGCGGG/CCCGCT	1																																																													1
AGCTCC/AGCTGG	2	4																																																												6
AGCTGC/AGCTGC	1																																																													1
AGGATC/ATCCTG	1																																																													1
AGGATG/ATCCTC	2	1																																																												3
AGGCAT/ATGCCT	1																																																													1
AGGCCG/CCTCGG	1																																																													1
AGGCGG/CCGCCT	5			1																																																										6
AGGGCG/CCCTCG	2																																																													2
AGGGGC/CCCCTG	2																																																													2
AGGGGG/CCCCCT	2																																																													2
ATATCC/ATATGG	1																																																													1
ATCCGC/ATGCGG	3	1																																																												4
ATCGCC/ATGGCG	2																																																													2
ATCGGC/ATGCCG		1																																																												1
ATGCCC/ATGGGC	2																																																													2
CCCCGG/CCGGGG	2																																																													2
CCCGCG/CGCGGG	2	1	1																																																											4
CCCGGG/CCCGGG	1																																																													1
CCGCGG/CCGCGG	4																																																													4
CCGGCG/CCGGCG		1																																																												1
