Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_056903915.1/fasta/hub_GCA_056903915.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              38692
Total size of examined sequences (bp):           129192457
Total number of identified SSRs:                 44178
Number of SSR containing sequences:              20969
Number of sequences containing more than 1 SSR:  9388
Number of SSRs present in compound formation:    6079


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	58
2	16368
3	7524
4	11641
5	7055
6	1532

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	6	5	1	2	1	1			2																																																28
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1																																												1											1	3
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	11	2	2	5	3	2		1										1																																								27
AC	-	-	-	595	403	278	185	164	141	119	108	97	90	50	45	51	28	27	30	24	19	15	11	6	6	7	7	4	6	4	7	1	2	9	6																																								2545
AG	-	-	-	354	213	175	134	101	96	79	70	71	62	44	66	38	29	34	39	23	14	15	15	11	13	2	10	5	2	3	3	2	5	2	4	2																																							1736
AT	-	-	-	242	119	50	44	24	7		2																																																																488
CA	-	-	-	734	480	290	180	114	85	88	72	58	48	40	36	35	20	19	19	12	12	14	11	6	3	3	3	4		5	4	2		6	5																																								2408
CG	-	-	-	25	3		1																																																																				29
CT	-	-	-	210	155	85	76	77	50	55	40	45	33	27	22	23	21	16	10	15	12	7	4	3	5	3	2	3	1	2	2		1	1	2	3																																							1011
GA	-	-	-	270	155	140	91	78	57	57	41	61	42	30	32	30	32	22	18	19	14	15	13	11	7	8	9	7	4	3	6		1	2	3																																								1278
GC	-	-	-	24	17	1																																																																					42
GT	-	-	-	501	316	187	132	106	81	69	82	53	45	44	38	25	18	19	14	15	13	7	6	8	12	5	5	1		3	2	4	1	6	6																																								1824
TA	-	-	-	165	74	45	30	13	5	4	2		1																																																														339
TC	-	-	-	358	264	182	139	120	97	83	77	78	86	69	46	41	46	30	26	16	20	15	15	10	8	8	8	6	3		2	1	4	2	3																																								1863
TG	-	-	-	780	458	282	222	163	136	118	91	97	82	68	43	39	40	28	25	19	13	21	10	11	6	11	7	3	4	3	2	3	3	5	11	1																																							2805
AAC	-	-	110	53	30	18	12	12	5	3	2	2	3			2			1				1																																																				254
AAG	-	-	46	17	10	13	2	1	1	3	8	4	2	2	3	9	1	3	2	2	5	9	3																																																				146
AAT	-	-	101	32	14	10	7	6	7	3	3	5	5		4	7	5	4	2	6	12	34	2																																																				269
ACA	-	-	35	23	13	5	8	3	4		4	1	1	1			1							1																																																			100
ACC	-	-	54	20	14	4	1	4	3	1																																																																	101
ACG	-	-	1																																																																								1
ACT	-	-	6	2	2	2	1	4	3	2		1	1	2		1	3	5	1	1		2	1																																																				40
AGA	-	-	22	5	2		5	4	3	2	4			3	2	2	2	5	4	6	1	5	2																																																				79
AGC	-	-	60	29	10	11	4	1		2								1																																																									118
AGG	-	-	80	37	29	16	11	8	4	6	2			1						1																																																							195
AGT	-	-	3	7	3	4	2	2	2		2		3	1	1	1	1	2	1	2		2																																																					39
ATA	-	-	28	14	10	6	2	2	4	7	7	3	7	3	3	9	4	3	5	3	7	22	3																																																				152
ATC	-	-	47	36	33	16	15	14	15	9	6	1	8	5	1	6	3	4				1																																																					220
ATG	-	-	47	20	25	16	12	10	6	5	9	4	4	4	2	7	5		1	1	2	1																																																					181
ATT	-	-	66	34	15	15	2	4	5	3	2	1	2	9	2	6	4	3	3	2	9	26	1																																																				214
CAA	-	-	76	38	14	16	10	2	3	2	1	2	3	1	1	1		2																																																									172
CAC	-	-	79	39	15	7	5	3	1	1	2																																																																152
CAG	-	-	63	35	13	12	5	4	4	1																																																																	137
CAT	-	-	47	23	10	13	10	6	6	8	4	1	2	2	3	1	1		1			1																																																					139
CCA	-	-	172	54	22	7	2	1	4			1																																																															263
CCG	-	-	17	7	4	1																																																																					29
CCT	-	-	109	49	32	14	9	8	5	3	5	3	2	1		3																																																											243
CGA	-	-	1	1																																																																							2
CGC	-	-	22	5	5	3																																																																					35
CGG	-	-	12	3	2																																																																						17
CGT	-	-	1	1																																																																							2
CTA	-	-	8	8	1	2	3	3	2	2		2		1	1	1	1				3	1																																																					39
CTC	-	-	64	50	24	17	8	7	7	5		3	3	2	2			1																																																									193
CTG	-	-	51	18	12	7	3		1								1																																																										93
CTT	-	-	30	14	12	4	1	1	1		1	2	1	3	1	2	4	2	2	3	1	3	1																																																				89
GAA	-	-	29	10	4	2	5	3	3	4	5	2	3	4	3	7	7	6	1	3	6	10	4																																																				121
GAC	-	-	1	1																																																																							2
GAG	-	-	120	64	34	21	14	12	7	5	5	2	1		1					1																																																							287
GAT	-	-	48	22	27	11	9	6	6	4	7	6	7	2	1	1	3	1	2																																																								163
GCA	-	-	58	21	7	11	2	2	1			1																																																															103
GCC	-	-	35	20	8	5	2																																																																				70
GCG	-	-	12	7	6		1																																																																				26
GCT	-	-	47	20	12	3	3	1	2	2																																																																	90
GGA	-	-	94	58	28	19	15	10	6		1			1	1																																																												233
GGC	-	-	45	18	7	3	2	1	1																																																																		77
GGT	-	-	78	29	11	4	4	1	2																																																																		129
GTA	-	-	9	2	2	2	2	2	3	1	2	1	2	2	2	3	1	3			1	2	3																																																				45
GTC	-	-	4				1																																																																				5
GTG	-	-	123	46	24	12		4	2	1	2		1																																																														215
GTT	-	-	60	17	12	11	6	8	4	4					1																																																												123
TAA	-	-	46	15	8	4	5	3	4	3	3	2		7	5	4	3	2	1	4	5	28	2																																																				154
TAC	-	-	5	6		4	1	3	5	4	4			1	5	2	3	2	1	1	3		1																																																				51
TAG	-	-	12	5	4	2	5	1		1	4	4		3	1	2	2	3	2		1	1																																																					53
TAT	-	-	32	11	9	4	2	2	3	4	7	3	1	3	4	2	4	1	3	2	7	24	1																																																				129
TCA	-	-	36	23	18	10	13	5	2	4	5	5	3		2	3		1	1	2		3																																																					136
TCC	-	-	92	66	49	25	23	12	8	4	3	2	1	1																																																													286
TCG	-	-	5	1																																																																							6
TCT	-	-	21	17	9	2	4	5	3	1	6	2	1	2		5	1	4	3	4	3	7	2																																																				102
TGA	-	-	43	36	24	22	9	9	4	4	3	4	6	1	4	3	2	1	1		1	1	1																																																				179
TGC	-	-	60	29	21	12	6	5	2	1			1																																																														137
TGG	-	-	102	31	18	6	7	3	2		1																																																																170
TGT	-	-	69	23	10	10	6	5	1			3	1	1				1																																																									130
TTA	-	-	51	24	15	10	6	4	8	7	2	4	7	6	9	1	7	8	5	3	9	20	3																																																				209
TTC	-	-	45	16	18	2	8	3	4	2	4	2	7	4	6	4	1		2	5	5	9																																																					147
TTG	-	-	94	61	18	19	8	12	5	3	2	2	2	2			1			2			1																																																				232
AAAC	-	193	83	27	11	2	1																																																																				317
AAAG	-	78	29	28	22	16	10	14	13	14	14	12	10	13	7	9																																																											289
AAAT	-	361	188	108	55	49	32	17	8	13	3	4	4																																																														842
AACA	-	48	11	12	6	1	1																																																																				79
AACC	-	13	2	1	2																																																																						18
AACT	-	5	2		1	1	2				1			2	1	2	1																																																										18
AAGA	-	18	6	8	12	8	8	6	11	3	9	8	8	12	8	11																																																											136
AAGC	-	16	2	2	1	1																																																																					22
AAGG	-	29	14	7	10	13	3	5	4		2	2	1		1	3	1																																																										95
AAGT	-	1		2	1			1		1					1	2																																																											9
AATA	-	187	98	74	38	35	30	29	11	10	5	5	1	1	1																																																												525
AATC	-	17	11	4	3	3	1	3		2			1		1																																																												46
AATG	-	26	16	20	10	5	8	1	1	1	1																																																																89
AATT	-	15	6	6	2							1																																																															30
ACAA	-	35	9	9		2		1																																																																			56
ACAG	-	16	11	5	4	1	1	2	1	1																																																																	42
ACAT	-	3	1		1		1	1	2		3	1	2			9																																																											24
ACCA	-	1			1				1																																																																		3
ACCC	-	5																																																																									5
ACCT	-	3		1						1	1																																																																6
ACGA	-	1																																																																									1
ACGC	-	1		1																																																																							2
ACGG	-	1		1																																																																							2
ACTA	-	1	1	2	1	1						2	1	1																																																													10
ACTC	-	2	1		1		1		1		1																																																																7
ACTG	-	6	2	2																																																																							10
ACTT	-	3	1			1	1	1			1				1																																																												9
AGAA	-	20	17	8	8	5	7	6	6	7	3	7	9	4	5	8																																																											120
AGAC	-	26	19	11	12	2	5	2			2	2	1																																																														82
AGAT	-	5	10	4	4	5	3	2	4	7	5	3	2	5	9	19																																																											87
AGCA	-	8						1																																																																			9
AGCC	-	17	2		1	1																																																																					21
AGCG	-	1																																																																									1
AGGA	-	14	11	3	7	6	2	3	3	4	2	3	2		2	2	1																																																										65
AGGC	-	21	13	3				1																																																																			38
AGGG	-	22	13	3	1			1																																																																			40
AGGT	-	2		3									1			1																																																											7
AGTA	-	1	1	2	1			1			1						1																																																										8
AGTC	-	2	1	2	1																																																																						6
AGTG	-	1	3			1		1		3																																																																	9
AGTT	-					1	1			1		2				1	1																																																										7
ATAA	-	104	85	51	32	40	22	21	18	12	8	8	3	1	1																																																												406
ATAC	-	3	1	1	1		2	1	2		1		1	3	3	13	1																																																										33
ATAG	-	7	4	1	3	3	2	6	5	4	2	2	4	2	2	27	1																																																										75
ATCA	-	10	7	1	6	1	1	1	1	1																																																																	29
ATCC	-	7	2	2	3		1		1	1	1				1																																																												19
ATCT	-	12	4	6	4	4	4	3	3	4	1	6	4	5	2	20																																																											82
ATGA	-	9	12	4	2	3	3	3				1		1	1																																																												39
ATGC	-	4	1	1		1																																																																					7
ATGG	-	14	4	3	2	1	1	2	1	1	1																																																																30
ATGT	-	5	3	2	1		2	2	1		2		2	2	1	10	1																																																										34
ATTA	-	16	2	2																																																																							20
ATTC	-	34	23	17	5	8	5	2																																																																			94
ATTG	-	12	9	5	3	2	1	1		2			1		1																																																												37
ATTT	-	240	131	93	50	37	33	11	10	9	3	4	2			1																																																											624
CAAA	-	73	21	7	6	2																																																																					109
CAAC	-	5		1	1	1		2	1																																																																		11
CAAG	-	14	5	3																																																																							22
CAAT	-	12	4	7	2	6	2	1			1																																																																35
CACC	-	16	5																																																																								21
CACG	-	8	1	1			1																																																																				11
CACT	-	4	1			1	2		1		2					1																																																											12
CAGA	-	11	4	5	1	3			1	2				1																																																													28
CAGC	-	9	2	3																																																																							14
CAGG	-	14	8	2		1																																																																					25
CAGT	-	3	3	1																																																																							7
CATA	-	4	1	2	3	1	1	3	1	2	1	5	2		1	5	2																																																										34
CATC	-	9	4	3	3				2	2																																																																	23
CATG	-	10	1		1																																																																						12
CATT	-	19	9	5	5	1	1			1		1																																																															42
CCAA	-	9	1	2												1																																																											13
CCAC	-	11	2	1																																																																							14
CCAG	-	7	3	1	1	1																																																																					13
CCAT	-	11	3	1	1					2		1																																																															19
CCCA	-	19	5																																																																								24
CCCT	-	34	10	4	1	2																																																																					51
CCGC	-	4	1																																																																								5
CCGG	-	1																																																																									1
CCGT	-	1																																																																									1
CCTA	-	2	1	1	1	2						1																																																															8
CCTC	-	33	12	4	1	2	2																																																																				54
CCTG	-	17	4	2	1	1					1																																																																26
CCTT	-	12	10	11	5	4	8	1	3	3	3		1		1	1																																																											63
CGAC	-	1																																																																									1
CGAG	-	1																																																																									1
CGCA	-	1	2				1																																																																				4
CGCC	-	7	2																																																																								9
CGCT	-	2	1																																																																								3
CGGG	-	3	1																																																																								4
CGGT	-			1																																																																							1
CGTG	-	1	1		1	1																																																																					4
CTAA	-	5	1	1	1	2				1	1		2																																																														14
CTAC	-		2	1		1	1						1				1																																																										7
CTAG	-	2	3																																																																								5
CTAT	-	3	1	2	3	2	1	3	1	3	2	1	5		6	14																																																											47
CTCA	-	8	1			1			1			1																																																															12
CTCC	-	38	8	6																																																																							52
CTCG	-	4	2		1																																																																						7
CTGA	-	3	2																																																																								5
CTGC	-	28	9		1																																																																						38
CTGG	-	5	1	2			1																																																																				9
CTGT	-	8	5	3	4	2	1	3	1		1																																																																28
CTTA	-	3	3		1			1		4	1					1																																																											14
CTTC	-	20	10	5	8	7	3	3	5	2	1		2			1																																																											67
CTTG	-	13	1		2	1																																																																					17
CTTT	-	26	10	7	6	9	4	7	7	7	2	5	8	5	9	5																																																											117
GAAA	-	20	9	9	9	10	10	4	10	4	12	7	7	4	6	14																																																											135
GAAG	-	19	13	9	7	3	5	8	3	2	3	5	3			1	1																																																										82
GAAT	-	13	10	5	2	4	2	2	1		1				1																																																												41
GACA	-	9	8	5	4	1	3			1																																																																	31
GACC	-	1	1																																																																								2
GACG	-					1																																																																					1
GACT	-	2	2																																																																								4
GAGC	-	6	3																																																																								9
GAGG	-	35	6	4	2	1																																																																					48
GAGT	-	2	11	3	1	1	1									1																																																											20
GATA	-	8	7	3	3	5	5	5	3	5	5	3	1	5	6	17																																																											81
GATG	-	8	4	1	3	2	2	2		2		1			1		1																																																										27
GATT	-	8	6		4										1	1																																																											20
GCAA	-	4	3		1																																																																						8
GCAC	-	11	4	1																																																																							16
GCAG	-	9	7	2		1	1																																																																				20
GCAT	-	4																																																																									4
GCCA	-	6	1	2																																																																							9
GCCC	-	1																																																																									1
GCCT	-	17	6	3	2	1	2																																																																				31
GCGA	-	4																																																																									4
GCGG	-	3	1																																																																								4
GCGT	-	5	1								1																																																																7
GCTC	-	3																																																																									3
GCTG	-	3	3		1																																																																						7
GCTT	-	3	1																																																																								4
GGAA	-	27	11	6	14		3	4	4	3	8	2	2	3	4	2																																																											93
GGAC	-	2		1																																																																							3
GGAG	-	40	13	2	1																																																																						56
GGAT	-	6		4	3	1	2				1	1																																																															18
GGCA	-	13	3		1																																																																						17
GGCC	-	2																																																																									2
GGCG	-	5																																																																									5
GGCT	-	4	1																																																																								5
GGGA	-	23	4	4	2																																																																						33
GGGC	-	3	2																																																																								5
GGGT	-	15	1																																																																								16
GGTA	-	2				1			1	1					1																																																												6
GGTC	-							1																																																																			1
GGTG	-	15			1																																																																						16
GGTT	-	6	1	1																																																																							8
GTAA	-	2	2		2										1		1																																																										8
GTAG	-	1	1	2		2				1				1																																																													8
GTAT	-	5		2			1			2		2	2	3		2																																																											19
GTCA	-						1																																																																				1
GTCC	-	1			1																																																																						2
GTCT	-	10	7	8	1	3	1		2	1																																																																	33
GTGA	-	3	5	1		2		1																																																																			12
GTGC	-	13	2	3	1																																																																						19
GTGG	-	12	5	2																																																																							19
GTTA	-	2	3										1																																																														6
GTTC	-		1																																																																								1
GTTG	-	4	2	1									1																																																														8
GTTT	-	50	20	11	1	1																																																																					83
TAAA	-	209	115	62	50	25	21	24	8	3	1	2	1																																																														521
TAAC	-	4	2		1	1	1	1	1	1	3		3																																																														18
TAAG	-	5	1	3	1	1	1	1	1	1		1	1	1	1																																																												19
TAAT	-	9	2		1		1	1																																																																			14
TACA	-	3	2	4	2	1				2		3	1	1	3	18	2																																																										42
TACC	-	7	1			1		1									1																																																										11
TACT	-	3	1	2		3	1	1			1					1	3																																																										16
TAGA	-	8	4		3	2	2	5	5	2	4	6		5	5	17																																																											68
TAGC	-	2	1	1	1																																																																						5
TAGG	-	5	4	1	3								1		1		2																																																										17
TAGT	-	2	2								1					1																																																											6
TATC	-	11	3	4	8	4	4	2	2	11	5	3	8	7	6	18	1																																																										97
TATG	-	5	5	1	3	1	1	1	1	4	1	2	2	2	3	10																																																											42
TATT	-	209	101	76	39	24	31	19	15	10	6				1																																																												531
TCAA	-	12	9	5	4	2	1	1		1	1																																																																36
TCAC	-	7	4	3	2					1		1					1																																																										19
TCAG	-	8	3			1	1		1																																																																		14
TCAT	-	16	12	4	5	2	1	2	1																																																																		43
TCCA	-	11	3	3	3		2	1	3				1																																																														27
TCCC	-	29	7	4	1	1																																																																					42
TCCG	-	1	2	1		1			1																																																																		6
TCCT	-	18	11	10	7	4	6	4	1	6	2	1	1	1		1	1																																																										74
TCGA	-				1																																																																						1
TCGC	-	1																																																																									1
TCGT	-		1																																																																								1
TCTA	-	9	7	6	4	3		2	2	4		3	6	3	11	16																																																											76
TCTG	-	19	18	15	8	5	6	1	1	2	1		1																																																														77
TCTT	-	30	13	8	6	12	6	11	6	9	7	9	4	7	5	13																																																											146
TGAA	-	23	23	7	8	7	3	1	1			1																																																															74
TGAC	-	3	2	2		1																																																																					8
TGAG	-	6	3	2	1	1	1		1			1	1																																																														17
TGAT	-	16	3	4	1	2			2	1																																																																	29
TGCA	-	8	2		1																																																																						11
TGCC	-	11	6	7			1																																																																				25
TGCG	-	2	3	1																																																																							6
TGCT	-	5	3	1																																																																							9
TGGA	-	8	5	3	3		2		1	1					3																																																												26
TGGC	-	8	1	2	1																																																																						12
TGGG	-	16	2																																																																								18
TGGT	-	7	3	2			1	1				1																																																															15
TGTA	-	7	2	2		2				1	1			3	3	6																																																											27
TGTC	-	16	10	8	7	3	3	2	2		1																																																																52
TGTT	-	59	18	10	4	1	2	1																																																																			95
TTAA	-	23	8			1																																																																					32
TTAC	-	3	3	2	2	2	1	2		2	1		1		3	2																																																											24
TTAG	-	4	2	3	5		2				2		1		1																																																												20
TTAT	-	167	75	54	33	30	22	17	11	6	4	3	1	1	1																																																												425
TTCA	-	26	16	9	5	6	2	4		1			1	1																																																													71
TTCC	-	36	16	14	12	10	4	5	4	1	3	2	5	2	2	2																																																											118
TTCG	-	1	2		1																																																																						4
TTCT	-	38	18	10	9	4	1	7	3	9	8	5	6	4	4	9	1																																																										136
TTGA	-	16	4	2	2	1	2	3			1			1																																																													32
TTGC	-	15	8	2	1																																																																						26
TTGG	-	12	2	3		1	2																																																																				20
TTGT	-	53	20	5	2				1																																																																		81
TTTA	-	248	141	81	57	43	29	37	16	8	11	4	2	1	1		1																																																										680
TTTC	-	84	32	20	21	21	13	10	13	22	9	9	12	13	12	14																																																											305
TTTG	-	178	54	20	8	5	1																																																																				266
AAAAC	338	46	7																																																																								391
AAAAG	126	23	6	3		1																																																																					159
AAAAT	217	53	10	4	1																																																																						285
AAACA	133	19	2	1		1																																																																					156
AAACC	15																																																																										15
AAACG	3																																																																										3
AAACT	5																																																																										5
AAAGA	46	7	8	2	2	1	1																																																																				67
AAAGC	59	7																																																																									66
AAAGG	25	2	1	1				1																																																																			30
AAATA	118	29	11	1		1	1																																																																				161
AAATC	20	6																																																																									26
AAATG	109	9	3																																																																								121
AAATT	15	5																																																																									20
AACAA	72	7		1			1																																																																				81
AACAC	7	1																																																																									8
AACAG	2																																																																										2
AACAT	1																																																																										1
AACCA	4	2																																																																									6
AACCC	6		1																																																																								7
AACGA	2																																																																										2
AACTA	2																																																																										2
AACTC	2	1																																																																									3
AACTG	1																																																																										1
AAGAA	27	9		2																																																																							38
AAGAG	2																																																																										2
AAGAT	1	1																																																																									2
AAGCA	17																																																																										17
AAGCC	7																																																																										7
AAGGA	11	1	1						1																																																																		14
AAGGC	6		1																																																																								7
AAGGG	6			1																																																																							7
AAGGT	2																																																																										2
AAGTC	1																																																																										1
AAGTG	1																																																																										1
AATAA	66	19	4	3		1			1																																																																		94
AATAC	5																																																																										5
AATAG	7	3			1																																																																						11
AATAT	4	1																																																																									5
AATCA	1																																																																										1
AATCC		1																																																																									1
AATCT	1																																																																										1
AATGA	42	5	2																																																																								49
AATGC	4																																																																										4
AATGG	5																																																																										5
AATGT				1																																																																							1
AATTA	9	2	1																																																																								12
AATTC	2																																																																										2
AATTG	5																																																																										5
AATTT	7	2		2																																																																							11
ACAAA	41	8																																																																									49
ACAAC	8	3																																																																									11
ACAAG	5																																																																										5
ACAAT	1		1					1																																																																			3
ACACA	4	1																																																																									5
ACAGA	4																																																																										4
ACAGG	1																																																																										1
ACAGT	1																																																																										1
ACATA	1																																																																										1
ACATG	1																																																																										1
ACATT	5	1																																																																									6
ACCAA	2																																																																										2
ACCAG				1																																																																							1
ACCAT	1																																																																										1
ACCCA	10	1																																																																									11
ACCCC	21		1																																																																								22
ACCCT	1																																																																										1
ACCTC	2																																																																										2
ACCTG	2																																																																										2
ACGAA	1	1																																																																									2
ACTAA	1																																																																										1
ACTAT	2									1			1																																																														4
ACTCA	1																																																																										1
ACTGA	2	1																																																																									3
ACTGC	1																																																																										1
ACTGG	1																																																																										1
ACTGT	3	1																																																																									4
ACTTG	1																																																																										1
AGAAA	30	3	2	1																																																																							36
AGAAC	8		1																																																																								9
AGAAG	2							1																																																																			3
AGAAT	7	3																																																																									10
AGACA	1																																																																										1
AGACC	1																																																																										1
AGAGA	2	1		1																																																																							4
AGAGC	1																																																																										1
AGAGG	1	1																																																																									2
AGATA	2		1					1																																																																			4
AGATT	1										1																																																																2
AGCAA	9	2																																																																									11
AGCAG		1																																																																									1
AGCAT	2																																																																										2
AGCCA	1																																																																										1
AGCCC	2	1				1																																																																					4
AGCGG	1																																																																										1
AGCTC	4																																																																										4
AGCTG		1																																																																									1
AGGAA	8		2																																																																								10
AGGAC	1																																																																										1
AGGAG	4		1																																																																								5
AGGAT	1	1																																																																									2
AGGCA	2																																																																										2
AGGCC	4																																																																										4
AGGCG	1																																																																										1
AGGGA	4	2	2																																																																								8
AGGGC	3	1																																																																									4
AGGGG	17																																																																										17
AGGTA	1																																																																										1
AGGTC	2																																																																										2
AGGTT	2																																																																										2
AGTAC	4																																																																										4
AGTAT	3	1																																																																									4
AGTCA	2																																																																										2
AGTGG	2																																																																										2
AGTTC	3																																																																										3
AGTTG	1																																																																										1
AGTTT	2																																																																										2
ATAAA	61	11	1	4		1																																																																					78
ATAAC	3		1																																																																								4
ATAAG			1																																																																								1
ATAAT	7		1	1		1																																																																					10
ATACA	1																																																																										1
ATACC	1																																																																										1
ATACT	1	1							1																																																																		3
ATAGA	2		1		3																																																																						6
ATAGT	1																																																																										1
ATATA	9			1		1	1				1																																																																13
ATATC	1																																																																										1
ATATG					1																																																																						1
ATATT	2					1																																																																					3
ATCAA	3	1																																																																									4
ATCAC	1																																																																										1
ATCAG	2																																																																										2
ATCCA	1				1																																																																						2
ATCCC	2				1																																																																						3
ATCCT		1																																																																									1
ATCTA	2	1	1																																																																								4
ATCTC	1																																																																										1
ATCTG	2																																																																										2
ATCTT				1																																																																							1
ATGAA	30	4	1																																																																								35
ATGAC	1																																																																										1
ATGCA	1																																																																										1
ATGGA	2																																																																										2
ATGGC	2																																																																										2
ATGGG	1		1																																																																								2
ATGGT	1																																																																										1
ATGTA	1																																																																										1
ATGTC	1																																																																										1
ATGTG	2																																																																										2
ATGTT	2																																																																										2
ATTAA	4	2		1																																																																							7
ATTAC	2																																																																										2
ATTAT	3				2																																																																						5
ATTCA	4																																																																										4
ATTCC	4																																																																										4
ATTCT	6	2			1																																																																						9
ATTGC	2																																																																										2
ATTGG	1																																																																										1
ATTGT	3		1																																																																								4
ATTTA	8	3																																																																									11
ATTTC	27	3			1																																																																						31
ATTTG	10	2																																																																									12
ATTTT	106	25	8	2																																																																							141
CAAAA	111	15		1		1																																																																					128
CAAAC	6	1	1																																																																								8
CAAAG	34	7	1																																																																								42
CAAAT	4	3	1																																																																								8
CAACA	5																																																																										5
CAACC	1		1																																																																								2
CAACG	1																																																																										1
CAACT	2																																																																										2
CAAGA	1																																																																										1
CAAGC	1																																																																										1
CAAGG	2		1																																																																								3
CAAGT		1																																																																									1
CAATA	6																																																																										6
CAATG	3																																																																										3
CAATT		1																																																																									1
CACAA	3																																																																										3
CACAC	2																																																																										2
CACAG	1																																																																										1
CACAT	1																																																																										1
CACCA	1																																																																										1
CACCC	28	2																																																																									30
CACCT	1																																																																										1
CACTA	1																																																																										1
CACTC	1																																																																										1
CACTG	2	1																																																																									3
CAGAA	9	1																																																																									10
CAGAC	1																																																																										1
CAGAG	3																																																																										3
CAGCA	4																																																																										4
CAGCC	2	2																																																																									4
CAGCT	3																																																																										3
CAGGA	7	1																																																																									8
CAGGC	1	1																																																																									2
CAGGG	2	1																																																																									3
CAGGT	2																																																																										2
CAGTA	3																																																																										3
CAGTT	3																																																																										3
CATAA							1																																																																				1
CATAG	1																																																																										1
CATAT	2																																																																										2
CATCA	1																																																																										1
CATCC	3																																																																										3
CATGA	1																																																																										1
CATGC	1																																																																										1
CATGG	1																																																																										1
CATTA	3		1																																																																								4
CATTC	2																																																																										2
CATTG	4	1																																																																									5
CATTT	60	9	2																																																																								71
CCAAA	4																																																																										4
CCAAG	7																																																																										7
CCAAT	1																																																																										1
CCACA	1																																																																										1
CCACC	24	5	4	1																																																																							34
CCACG	1																																																																										1
CCACT	2																																																																										2
CCAGC	2																																																																										2
CCAGG	2																																																																										2
CCAGT	2																																																																										2
CCATA	1																																																																										1
CCATC	4																																																																										4
CCATG	2	1																																																																									3
CCCAA	1																																																																										1
CCCAC	20	5	2																																																																								27
CCCAG	7	1					1																																																																				9
CCCAT	2																																																																										2
CCCCA	113	15	6																																																																								134
CCCCG	2	2																																																																									4
CCCCT	18	3	1	2																																																																							24
CCCGA	1																																																																										1
CCCGC	1																																																																										1
CCCGG	1	1																																																																									2
CCCTA	1																																																																										1
CCCTC	15	1	2																																																																								18
CCCTG	2		1																																																																								3
CCCTT	8																																																																										8
CCGAG	1																																																																										1
CCGCC	2																																																																										2
CCGGA	1																																																																										1
CCGGC	1																																																																										1
CCGGG	1																																																																										1
CCTAG	1																																																																										1
CCTCC	11	1																																																																									12
CCTCG		1																																																																									1
CCTCT	4	1																																																																									5
CCTGC	2																																																																										2
CCTGG	3	3																																																																									6
CCTGT	4																																																																										4
CCTTA	5																																																																										5
CCTTC	7	2																																																																									9
CCTTG	5																																																																										5
CCTTT	5	1				1																																																																					7
CGAAA	2																																																																										2
CGCCA	1																																																																										1
CGCCC	4																																																																										4
CGCCT	2	1																																																																									3
CGGAG	2																																																																										2
CGGCC	1																																																																										1
CGGGA	1																																																																										1
CGGGC	2																																																																										2
CGGGG	2																																																																										2
CGTTT	3																																																																										3
CTACA	1																																																																										1
CTACC	1																																																																										1
CTAGG	1																																																																										1
CTATA	1	2																																																																									3
CTATG							1																																																																				1
CTCAC	2																																																																										2
CTCAG	1																																																																										1
CTCAT	1																																																																										1
CTCCA	2																																																																										2
CTCCC	18	1	2																																																																								21
CTCCT	5																																																																										5
CTCTC	5	2																																																																									7
CTCTG	2																																																																										2
CTCTT	1																																																																										1
CTGAA	2	1																																																																									3
CTGAT	2																																																																										2
CTGCA	2																																																																										2
CTGCC	4	1																																																																									5
CTGGC	2																																																																										2
CTGGG	4																																																																										4
CTGGT	1	1																																																																									2
CTGTA	1	1																																																																									2
CTGTC	2																																																																										2
CTGTG		1																																																																									1
CTGTT	1																																																																										1
CTTAG	1																																																																										1
CTTAT	1	1						1																																																																			3
CTTCA	3																																																																										3
CTTCC	8	2					1																																																																				11
CTTCT	3						1																																																																				4
CTTGA	1																																																																										1
CTTGC	2	1																																																																									3
CTTGG	4																																																																										4
CTTGT	1																																																																										1
CTTTA	3																																																																										3
CTTTC	11	4				1			1																																																																		17
CTTTG	76	14	4		1																																																																						95
CTTTT	49	2	1																																																																								52
GAAAA	50	1		2			1																																																																				54
GAAAC	9																																																																										9
GAAAG	4	3	2																																																																								9
GAAAT	32	2		1																																																																							35
GAACA	5	1																																																																									6
GAACC	2																																																																										2
GAACT	1																																																																										1
GAAGA	3		2							1																																																																	6
GAAGC	1																																																																										1
GAAGG	2																																																																										2
GAATA	4	3		1																																																																							8
GAATG	4																																																																										4
GAATT	1																																																																										1
GACAA	1																																																																										1
GACAT	1																																																																										1
GACCA	1																																																																										1
GACCC	2																																																																										2
GACCT	4																																																																										4
GACGG	1																																																																										1
GACTG	3																																																																										3
GAGAA	4	2																																																																									6
GAGAG	2	2	1																																																																								5
GAGAT	3																																																																										3
GAGCA	1																																																																										1
GAGGA	7	2	1																																																																								10
GAGGC	1	1																																																																									2
GAGGG	5	1			1																																																																						7
GAGTG	1																																																																										1
GAGTT	1																																																																										1
GATAA	3	1	1																																																																								5
GATCA	1																																																																										1
GATCG	1																																																																										1
GATCT	2																																																																										2
GATGG	1																																																																										1
GATTA		1																																																																									1
GATTG	2																																																																										2
GATTT	2	2																																																																									4
GCAAA	16	3	1																																																																								20
GCAAG		1																																																																									1
GCAAT	2																																																																										2
GCACG	1																																																																										1
GCAGA	3																																																																										3
GCAGG	4	1																																																																									5
GCATA	1																																																																										1
GCATG	2																																																																										2
GCATT		1																																																																									1
GCCAA	5	1																																																																									6
GCCAC	2																																																																										2
GCCAG	3	2																																																																									5
GCCAT	1																																																																										1
GCCCA	7	1																																																																									8
GCCCC	2																																																																										2
GCCCG	1																																																																										1
GCCCT	2																																																																										2
GCCGG	2																																																																										2
GCCGT			1																																																																								1
GCCTC	1	1																																																																									2
GCCTG	2																																																																										2
GCCTT	5	1																																																																									6
GCGAG	1																																																																										1
GCGGC	1																																																																										1
GCGGG	1																																																																										1
GCGGT	1																																																																										1
GCGTG	1	1																																																																									2
GCTCG	1																																																																										1
GCTCT	3																																																																										3
GCTGA	2																																																																										2
GCTGC	1																																																																										1
GCTGG	5																																																																										5
GCTGT	2																																																																										2
GCTTG	14	2																																																																									16
GCTTT	12	2	2																																																																								16
GGAAA	11	1	1	1	1																																																																						15
GGAAG	11	2																																																																									13
GGACA	1																																																																										1
GGAGA	5	2																																																																									7
GGAGC	1																																																																										1
GGAGG	9	5	1																																																																								15
GGAGT	1																																																																										1
GGATA		1																																																																									1
GGATG	3																																																																										3
GGCAG	5																																																																										5
GGCCA	3	1																																																																									4
GGCCC	2																																																																										2
GGCCT	4																																																																										4
GGCGA	1																																																																										1
GGCGG	2																																																																										2
GGCGT	1																																																																										1
GGCTC	2																																																																										2
GGCTG	5																																																																										5
GGCTT	1	1																																																																									2
GGGAA	3																																																																										3
GGGAC	1																																																																										1
GGGAG	19	2	1		1																																																																						23
GGGCA	5	1																																																																									6
GGGCC	3																																																																										3
GGGCT	5	3	1																																																																								9
GGGGA	30	4	4																																																																								38
GGGGC	2		1																																																																								3
GGGGT	39	11	1																																																																								51
GGGTA			1																																																																								1
GGGTC	2																																																																										2
GGGTG	26	7	1																																																																								34
GGGTT	1		1																																																																								2
GGTCA	1																																																																										1
GGTCC	1																																																																										1
GGTGA	1																																																																										1
GGTGG	14	5																																																																									19
GGTGT	1																																																																										1
GGTTA	1																																																																										1
GGTTC	1																																																																										1
GGTTG	1	1																																																																									2
GGTTT	3																																																																										3
GTACA	1																																																																										1
GTACT	4																																																																										4
GTATA	2																																																																										2
GTATT			1																																																																								1
GTGAA	1																																																																										1
GTGCA	1																																																																										1
GTGCC	2																																																																										2
GTGCT	1																																																																										1
GTGGA	2																																																																										2
GTGGC		1																																																																									1
GTGGG	24	4																																																																									28
GTGGT	1																																																																										1
GTGTA	3																																																																										3
GTGTG	2	1																																																																									3
GTGTT	2																																																																										2
GTTAG	1					1																																																																					2
GTTAT	2																																																																										2
GTTCA	2																																																																										2
GTTCT	3	1																																																																									4
GTTGA	1																																																																										1
GTTGG		1	1																																																																								2
GTTGT	4																																																																										4
GTTTA	2																																																																										2
GTTTC	7																																																																										7
GTTTG	9	1																																																																									10
GTTTT	123	17	6																																																																								146
TAAAA	95	10	7																																																																								112
TAAAC	5																																																																										5
TAAAG	2	1																																																																									3
TAAAT	2	1	1																																																																								4
TAACA	2																																																																										2
TAACC	2																																																																										2
TAAGA	2	1					1																																																																				4
TAAGC	1																																																																										1
TAAGG	8																																																																										8
TAATA	6		1			1				1	1																																																																10
TAATG	1																																																																										1
TAATT	9	2	1																																																																								12
TACAA	3	1	2																																																																								6
TACAC	1				1																																																																						2
TACAG	4																																																																										4
TACAT	1																																																																										1
TACCC	1																																																																										1
TACTA		1			1																																																																						2
TACTG	6			1																																																																							7
TAGAA	5	4		1																																																																							10
TAGAC	1																																																																										1
TAGAG	1																																																																										1
TAGCA	3																																																																										3
TAGCC	1																																																																										1
TAGGA	1																																																																										1
TAGGC	1																																																																										1
TAGGT	2																																																																										2
TAGTA	2		1																																																																								3
TAGTG	2																																																																										2
TAGTT	1																																																																										1
TATAA	1			2	2		1																																																																				6
TATAC	1																																																																										1
TATAG	2						1																																																																				3
TATAT	3																																																																										3
TATCA	1																																																																										1
TATCC	1	1																																																																									2
TATCT	1																																																																										1
TATGC		1																																																																									1
TATGT	1																																																																										1
TATTA		3				1			1																																																																		5
TATTC	4	2																																																																									6
TATTG	2																																																																										2
TATTT	71	13	2	2																																																																							88
TCAAA	4	1																																																																									5
TCAAC	3																																																																										3
TCAAG	1																																																																										1
TCAAT	3																																																																										3
TCACA	1																																																																										1
TCAGA	1																																																																										1
TCAGC	1																																																																										1
TCAGT	2																																																																										2
TCATA	1																																																																										1
TCATG	2																																																																										2
TCATT	16	3																																																																									19
TCCAA	1																																																																										1
TCCAC	1																																																																										1
TCCAG	1																																																																										1
TCCCA	1	2																																																																									3
TCCCC	15	1																																																																									16
TCCCT	4																																																																										4
TCCTC	8	2																																																																									10
TCCTG	3																																																																										3
TCCTT	4	1																																																																									5
TCGCC	1																																																																										1
TCTAA		1																																																																									1
TCTAT	3	2	1		1																																																																						7
TCTCA	1																																																																										1
TCTCC	5	1																																																																									6
TCTCT	3	2			1																																																																						6
TCTGC	2	1																																																																									3
TCTGT	2																																																																										2
TCTTA	1																																																																										1
TCTTC	4																																																																										4
TCTTG		1																																																																									1
TCTTT	21	4	2	2																																																																							29
TGAAA	19	4																																																																									23
TGAAC	3																																																																										3
TGAAT	1	1																																																																									2
TGACC	1																																																																										1
TGACT	1																																																																										1
TGAGA	1	1																																																																									2
TGAGC	1																																																																										1
TGAGG			1																																																																								1
TGATA	2																																																																										2
TGATC	1																																																																										1
TGATT	1	4																																																																									5
TGCAA	2																																																																										2
TGCAG	1																																																																										1
TGCAT	3	1																																																																									4
TGCCA		1																																																																									1
TGCCC	1																																																																										1
TGCCT	2																																																																										2
TGCTA	1																																																																										1
TGCTC		1																																																																									1
TGCTT	14		1																																																																								15
TGGAA	2	1																																																																									3
TGGAC	2																																																																										2
TGGAG	2																																																																										2
TGGAT	3																																																																										3
TGGCA	3																																																																										3
TGGCC	1	2																																																																									3
TGGCG		1																																																																									1
TGGCT	2																																																																										2
TGGGA	1	1																																																																									2
TGGGC	5																																																																										5
TGGGG	88	10	2																																																																								100
TGGGT	7																																																																										7
TGGTG	2																																																																										2
TGGTT	3	1																																																																									4
TGTAA	3																																																																										3
TGTAC	2																																																																										2
TGTAG	1																																																																										1
TGTAT	3																																																																										3
TGTCC	3																																																																										3
TGTCT	1		1																																																																								2
TGTGC	1	1																																																																									2
TGTGT	14	1					1																																																																				16
TGTTA	1																																																																										1
TGTTC	7																																																																										7
TGTTG	3	1																																																																									4
TGTTT	152	17	3																																																																								172
TTAAA	11	2																																																																									13
TTAAG	1																																																																										1
TTAAT	4	4																																																																									8
TTACA	2																																																																										2
TTACC	1																																																																										1
TTACT	1																																																																										1
TTAGG	1																																																																										1
TTAGT	1	1	1																																																																								3
TTATA	4						1	1																																																																			6
TTATC	12	3						1																																																																			16
TTATG	4				1																																																																						5
TTATT	76	16	2	2																																																																							96
TTCAA	2	1																																																																									3
TTCAG	2	2	1																																																																								5
TTCAT	28	2																																																																									30
TTCCA	6																																																																										6
TTCCC	6		1																																																																								7
TTCCT	6																																																																										6
TTCGT	1																																																																										1
TTCTA	11	1	1																																																																								13
TTCTC	5		1																																																																								6
TTCTG	9				1																																																																						10
TTCTT	30	5	1																																																																								36
TTGAA	2																																																																										2
TTGAG	1																																																																										1
TTGAT	12	8																																																																									20
TTGCA	2	1																																																																									3
TTGCC	3																																																																										3
TTGCT	6	1																																																																									7
TTGGA	2																																																																										2
TTGGC	3																																																																										3
TTGGG	3			1																																																																							4
TTGGT	3																																																																										3
TTGTA	2		1																																																																								3
TTGTG	3																																																																										3
TTGTT	62	5	2																																																																								69
TTTAA	16	4	1																																																																								21
TTTAC	3																																																																										3
TTTAG	6	1																																																																									7
TTTAT	119	34	5	2			1																																																																				161
TTTCA	87	1	1																																																																								89
TTTCC	29	3							1																																																																		33
TTTCT	58	12																																																																									70
TTTGA	12			1																																																																							13
TTTGC	24	1	2																																																																								27
TTTGG	11		1																																																																								12
TTTGT	68	9																																																																									77
TTTTA	146	42	12	3		1																																																																					204
TTTTC	115	17	6	2																																																																							140
TTTTG	263	41	8	2	1																																																																						315
AAAAAC	24																																																																										24
AAAAAG	22	4																																																																									26
AAAAAT	47	1								1																																																																	49
AAAACA	14		1																																																																								15
AAAACC	3																																																																										3
AAAACT	1																																																																										1
AAAAGA	11																																																																										11
AAAAGG	5																																																																										5
AAAAGT	1																																																																										1
AAAATA	30																																																																										30
AAAATC	2																																																																										2
AAAATG	1																																																																										1
AAAATT	2																																																																										2
AAACAA	12	2																																																																									14
AAACCA	1																																																																										1
AAACTA	1																																																																										1
AAAGAA	7																																																																										7
AAAGAG	2																																																																										2
AAAGCA	4																																																																										4
AAAGCG	1																																																																										1
AAAGGT	5																																																																										5
AAATAA	11	1																																																																									12
AAATAG	2				1																																																																						3
AAATAT	9	1																																																																									10
AAATTA	2																																																																										2
AACAAA	2																																																																										2
AACACC	1																																																																										1
AACACT	1																																																																										1
AACCCT	12	3																																																																									15
AACTAC	1																																																																										1
AACTAG	1																																																																										1
AAGAAA	1																																																																										1
AAGAAT	3																																																																										3
AAGACG	1																																																																										1
AAGACT		1																																																																									1
AAGAGA	1																																																																										1
AAGGAA	1																																																																										1
AAGGGG	1																																																																										1
AAGTTC	1																																																																										1
AATAAA	9	1																																																																									10
AATAGC	1																																																																										1
AATATA	2																																																																										2
AATATC		1																																																																									1
AATATG	1																																																																										1
AATATT	1																																																																										1
AATCAG	1																																																																										1
AATGAC	1																																																																										1
AATGCT	1																																																																										1
AATTAA	1																																																																										1
AATTAT	1																																																																										1
AATTCT	1																																																																										1
AATTGT	1																																																																										1
AATTTA	1																																																																										1
AATTTG	1																																																																										1
AATTTT	2																																																																										2
ACAAAA	4																																																																										4
ACAAAC	1																																																																										1
ACAACC	1																																																																										1
ACAATG	1																																																																										1
ACACAG		1																																																																									1
ACACAT	4																																																																										4
ACACCC	1	1																																																																									2
ACACGC			1																																																																								1
ACAGAC						1																																																																					1
ACAGAG	1	1																																																																									2
ACATAA	1																																																																										1
ACATCC	1																																																																										1
ACCAAA	1																																																																										1
ACCATC	1																																																																										1
ACCCCC	2																																																																										2
ACCCTA	9	2	2	1																																																																							14
ACCGAT	1																																																																										1
ACCTTA	1																																																																										1
ACCTTT	9																																																																										9
AGAAAA	7																																																																										7
AGAAGC	1																																																																										1
AGAAGG	1																																																																										1
AGAATA	1																																																																										1
AGAATC	1																																																																										1
AGAATG	1																																																																										1
AGACAA	1																																																																										1
AGACAG	3			1																																																																							4
AGAGAA	2																																																																										2
AGAGAC	2	1																																																																									3
AGAGAT	2																																																																										2
AGAGGA	3																																																																										3
AGAGGG	2	1																																																																									3
AGATAA	1																																																																										1
AGATAG	1		1																																																																								2
AGATAT	1	1																																																																									2
AGATGG	1																																																																										1
AGCAAA	3		1																																																																								4
AGCAGA	1																																																																										1
AGCAGT	1																																																																										1
AGCATT	1																																																																										1
AGCCAA	1																																																																										1
AGCGGC	1																																																																										1
AGGAAA	2																																																																										2
AGGAGA	3	1																																																																									4
AGGAGT	2																																																																										2
AGGCGG	1																																																																										1
AGGGAG	1																																																																										1
AGGGGC	1																																																																										1
AGGGGG	2																																																																										2
AGGGTT	12																																																																										12
AGTAAT	1																																																																										1
AGTAGC	1																																																																										1
AGTCTT	1																																																																										1
AGTTCC		1																																																																									1
AGTTGT		1																																																																									1
AGTTTT	1																																																																										1
ATAAAA	7																																																																										7
ATAAAG	1																																																																										1
ATAAAT	3																																																																										3
ATAAGA				1																																																																							1
ATAATC	1																																																																										1
ATAATG	1																																																																										1
ATAATT	2																																																																										2
ATACAC	1																																																																										1
ATACTA	1																																																																										1
ATAGAT	3	3	1	1																																																																							8
ATAGCA	1																																																																										1
ATAGGA	1																																																																										1
ATATAA	1																																																																										1
ATATAG	1		1			1																																																																					3
ATATTC			1																																																																								1
ATATTT	2																																																																										2
ATCATG	1																																																																										1
ATCCAT	1																																																																										1
ATCCTA	2																																																																										2
ATCTTA	1																																																																										1
ATGACA		1																																																																									1
ATGAGT		1																																																																									1
ATGATT		1																																																																									1
ATGCAT	1																																																																										1
ATGGGT	1																																																																										1
ATGGTG	1																																																																										1
ATGTTC	1																																																																										1
ATTAAT	1																																																																										1
ATTCAA	1																																																																										1
ATTCAT	1																																																																										1
ATTCGC	8																																																																										8
ATTCTG	1																																																																										1
ATTCTT			1																																																																								1
ATTTAG	1																																																																										1
ATTTAT	3																																																																										3
ATTTCC	1																																																																										1
ATTTTA	3																																																																										3
ATTTTC	1																																																																										1
ATTTTT	24	2																																																																									26
CAAAAA	16	2																																																																									18
CAAAAC	1																																																																										1
CAAAAG	1																																																																										1
CAAAGC	1																																																																										1
CAAATA	1																																																																										1
CAACAG	1																																																																										1
CAACCC	1																																																																										1
CAAGAT	1																																																																										1
CAATAA	1																																																																										1
CAATAT	1																																																																										1
CAATGA	1																																																																										1
CACAAA	1																																																																										1
CACACC	3	2																																																																									5
CACATG	2																																																																										2
CACCCA	4																																																																										4
CACCCC	6	1																																																																									7
CACCCT	1																																																																										1
CACCTC	1																																																																										1
CACGCA	1																																																																										1
CACGCG	1																																																																										1
CACTCC		1																																																																									1
CAGAAG		1																																																																									1
CAGAGA	1	1																																																																									2
CAGAGT	1																																																																										1
CAGCGG	1																																																																										1
CAGGAG	1																																																																										1
CAGGGA	1																																																																										1
CATAAT			1																																																																								1
CATACA	1																																																																										1
CATATA	2																																																																										2
CATCAC	2																																																																										2
CATCTG	2																																																																										2
CATCTT	1																																																																										1
CATGGC	1																																																																										1
CATGTA	1																																																																										1
CATTGG	1																																																																										1
CATTTC	2																																																																										2
CATTTT	1																																																																										1
CCAACA	1																																																																										1
CCAAGT	2																																																																										2
CCAATA	1																																																																										1
CCACAC	2																																																																										2
CCACCC	8																																																																										8
CCACCT	3																																																																										3
CCACTG	1																																																																										1
CCAGCA		1																																																																									1
CCAGCC	1																																																																										1
CCATAG			1																																																																								1
CCATCA	1																																																																										1
CCATCC	1																																																																										1
CCCAAT	1																																																																										1
CCCACA	1																																																																										1
CCCACC	2	1																																																																									3
CCCCAC	12																																																																										12
CCCCAG		1																																																																									1
CCCCCA	12																																																																										12
CCCCCT	5																																																																										5
CCCCTA	1																																																																										1
CCCCTC	3																																																																										3
CCCGCC		1																																																																									1
CCCGGC	1																																																																										1
CCCTAA	12	1																																																																									13
CCCTCC	4	1																																																																									5
CCCTCT	1																																																																										1
CCGCCC		1																																																																									1
CCGGTC	1																																																																										1
CCTAAC	13					1																																																																					14
CCTCCC	2	2																																																																									4
CCTCCG	2																																																																										2
CCTCTG	1																																																																										1
CCTCTT	1	1																																																																									2
CCTGCC	1																																																																										1
CCTTCT	1																																																																										1
CCTTTC	2																																																																										2
CCTTTT	1																																																																										1
CGGATG	4																																																																										4
CGGTGG	1																																																																										1
CGTCCT	1																																																																										1
CGTGCA	1																																																																										1
CTAAAC	1																																																																										1
CTAACA	2																																																																										2
CTAACC	12	1		1																																																																							14
CTACAG	1																																																																										1
CTACCC	1																																																																										1
CTACCT			1																																																																								1
CTATAA	1																																																																										1
CTATAT	1																																																																										1
CTATTT	1																																																																										1
CTCATC	1																																																																										1
CTCCAC	1																																																																										1
CTCCAG	2																																																																										2
CTCCGA	1																																																																										1
CTCCTG	1																																																																										1
CTCCTT	1																																																																										1
CTCTAA	1																																																																										1
CTCTCC	3																																																																										3
CTCTCG	1																																																																										1
CTCTGT	2		1																																																																								3
CTCTTC	2																																																																										2
CTCTTT	1																																																																										1
CTGATC	2																																																																										2
CTGCCT	2																																																																										2
CTGGCT	1																																																																										1
CTGGGG	1																																																																										1
CTGGTG		1																																																																									1
CTGTGT		1																																																																									1
CTGTTG	3																																																																										3
CTTATT	1		1																																																																								2
CTTCCC	2																																																																										2
CTTCCT	3																																																																										3
CTTCTC	3					1																																																																					4
CTTGGA	1																																																																										1
CTTGGG	1																																																																										1
CTTTCC	1																																																																										1
CTTTGG	1																																																																										1
CTTTTT	7																																																																										7
GAAAAA	3	1																																																																									4
GAAAAT	1																																																																										1
GAAACT	1																																																																										1
GAAAGA	1																																																																										1
GAAAGG	1																																																																										1
GAAGAG	4																																																																										4
GAAGTG	1																																																																										1
GAATAA	1	1																																																																									2
GAATTG	1																																																																										1
GACAAG		1																																																																									1
GACCGA	1																																																																										1
GACCTT	1																																																																										1
GACTCC	1																																																																										1
GACTCT	1																																																																										1
GAGAAA	1																																																																										1
GAGAAG								1																																																																			1
GAGAGG		1																																																																									1
GAGAGT						1																																																																					1
GAGGAA	1	1																																																																									2
GAGGCA	1																																																																										1
GAGGGA	1																																																																										1
GAGGGG	1																																																																										1
GAGGGT	1																																																																										1
GAGGTG	2																																																																										2
GATATA	1																																																																										1
GATGAC		1																																																																									1
GATTCT	1																																																																										1
GCACAC	1																																																																										1
GCAGAA	1																																																																										1
GCAGAG	3	1																																																																									4
GCAGGA	1																																																																										1
GCATCC	1																																																																										1
GCCACA	1																																																																										1
GCCACT	1																																																																										1
GCCCAC	1																																																																										1
GCCGCT	1																																																																										1
GCCGGA	1																																																																										1
GCCTCT	2																																																																										2
GCGCCC	1																																																																										1
GCGGCA	1																																																																										1
GCGGGA	1																																																																										1
GCGGGG	2																																																																										2
GCTACA	1																																																																										1
GCTCTC	1																																																																										1
GCTCTG	1																																																																										1
GCTGCA	1																																																																										1
GCTGCC	1																																																																										1
GCTGCG	1																																																																										1
GGAAAA	2																																																																										2
GGAAAG	1																																																																										1
GGAAAT	1																																																																										1
GGAAGC	1																																																																										1
GGACTG	1																																																																										1
GGAGGC	1																																																																										1
GGAGGG	2	1																																																																									3
GGAGTA	1																																																																										1
GGATAG	1																																																																										1
GGATGA	1																																																																										1
GGCGGA	1	1																																																																									2
GGCGGT	1																																																																										1
GGCTGC	1																																																																										1
GGCTGG	1																																																																										1
GGGACA	1																																																																										1
GGGAGA		1																																																																									1
GGGAGG	3																																																																										3
GGGCAA	1																																																																										1
GGGGAG	1																																																																										1
GGGGCC	1																																																																										1
GGGGGA	4																																																																										4
GGGGGC	2																																																																										2
GGGGGT	5																																																																										5
GGGGTG	6																																																																										6
GGGTGG	3																																																																										3
GGGTGT	2																																																																										2
GGGTTA	10	5																																																																									15
GGTCCT	1																																																																										1
GGTCGT		1																																																																									1
GGTGAG	1																																																																										1
GGTGGA	1																																																																										1
GGTGGC	1																																																																										1
GGTGGG	4																																																																										4
GGTGTG	4																																																																										4
GGTGTT		1																																																																									1
GGTTAG	8	2																																																																									10
GGTTGG	1	1																																																																									2
GGTTTT	2																																																																										2
GTAAAG	2																																																																										2
GTACGT	1																																																																										1
GTAGCA	1																																																																										1
GTAGTT	1																																																																										1
GTATGT	2																																																																										2
GTCCTT	1																																																																										1
GTCTCT	1			1																																																																							2
GTCTGC	1																																																																										1
GTGAGA	1																																																																										1
GTGAGC	1																																																																										1
GTGAGT	1																																																																										1
GTGATG		1																																																																									1
GTGCGC	1																																																																										1
GTGCGT	1																																																																										1
GTGGCA	1																																																																										1
GTGGGG	13																																																																										13
GTGGGT	3																																																																										3
GTGGTT	1																																																																										1
GTGTGC	4																																																																										4
GTGTGG	3	2	1																																																																								6
GTGTTG	1																																																																										1
GTTAGG	2	1																																																																									3
GTTAGT				1																																																																							1
GTTGTG	1																																																																										1
GTTTAG	1																																																																										1
GTTTTG	1																																																																										1
GTTTTT	6	1																																																																									7
TAAAAA	16		1																																																																								17
TAAAAT	4																																																																										4
TAAAGG	3																																																																										3
TAAATA	4																																																																										4
TAACAA	1																																																																										1
TAACCC	14	3	1																																																																								18
TAACTC	1																																																																										1
TAAGAG	1																																																																										1
TAAGGA	1																																																																										1
TAATCA	1																																																																										1
TAATTA	2																																																																										2
TAATTT	1																																																																										1
TACAAC	1																																																																										1
TACATA	1																																																																										1
TACCTT	2																																																																										2
TAGAAA	2																																																																										2
TAGAAT	1																																																																										1
TAGCAG	1																																																																										1
TAGCAT				1																																																																							1
TAGGGT	3																																																																										3
TAGTAA	1	1																																																																									2
TAGTAT	1																																																																										1
TAGTGG	1																																																																										1
TATAAA	1	2																																																																									3
TATAGA	2		1		1	1																																																																					5
TATAGG	1																																																																										1
TATATC	3	2	2																																																																								7
TATATT	2																																																																										2
TATCAA	1																																																																										1
TATCAG	1																																																																										1
TATCTA	3	2																																																																									5
TATCTC	1																																																																										1
TATGAT	1																																																																										1
TATGTA			1	1																																																																							2
TATTAC		1																																																																									1
TATTAG			1		1																																																																						2
TATTCA	2																																																																										2
TATTCG	1																																																																										1
TATTCT	1																																																																										1
TATTGT	1																																																																										1
TATTTA	4		1		1																																																																						6
TATTTC	1																																																																										1
TATTTT	15	2																																																																									17
TCAAAA	1																																																																										1
TCAAAT	1																																																																										1
TCACAC	1																																																																										1
TCAGAA	1	1																																																																									2
TCATAT	1																																																																										1
TCCAAG	1																																																																										1
TCCACC	2																																																																										2
TCCATC	1																																																																										1
TCCCAA		1																																																																									1
TCCCCC	2																																																																										2
TCCCCT	2																																																																										2
TCCCTT	1																																																																										1
TCCGGC	1																																																																										1
TCCTCG	1																																																																										1
TCCTCT	1						1																																																																				2
TCCTGC	1																																																																										1
TCCTTT	1																																																																										1
TCGTCT	1																																																																										1
TCTAAA	1																																																																										1
TCTAGA	1																																																																										1
TCTATA	1			1																																																																							2
TCTCCC	1																																																																										1
TCTCTA	3																																																																										3
TCTCTG	4	1		1																																																																							6
TCTCTT	3																																																																										3
TCTGAA	1																																																																										1
TCTGCC	1																																																																										1
TCTGGA		1																																																																									1
TCTGTC		1																																																																									1
TCTGTG	1																																																																										1
TCTTCC	3	1																																																																									4
TCTTCG	1																																																																										1
TCTTTC	1																																																																										1
TCTTTT	4																																																																										4
TGAAAT	3																																																																										3
TGACAG	1																																																																										1
TGAGAA	1																																																																										1
TGAGGA	1																																																																										1
TGAGTC	1																																																																										1
TGCACA	1																																																																										1
TGCCCC	1																																																																										1
TGCCCT	1																																																																										1
TGCGAA	17																																																																										17
TGCTGT	1																																																																										1
TGGAGG	1																																																																										1
TGGATT	1																																																																										1
TGGCAG	1																																																																										1
TGGCTC	1																																																																										1
TGGGCC	1																																																																										1
TGGGGA	1																																																																										1
TGGGGC	1																																																																										1
TGGGGG	4		1																																																																								5
TGGGGT	1																																																																										1
TGGGTG	2																																																																										2
TGGGTT	1																																																																										1
TGGTCT	1																																																																										1
TGGTGA	1																																																																										1
TGGTGC	2																																																																										2
TGGTGT	1																																																																										1
TGGTTT	2																																																																										2
TGTATA			1																																																																								1
TGTATT	1	1																																																																									2
TGTCAT	1																																																																										1
TGTCTC	1																																																																										1
TGTCTG	1																																																																										1
TGTGCA	1																																																																										1
TGTGGG	1																																																																										1
TGTGTC		1																																																																									1
TGTTGC	2		1																																																																								3
TGTTTT	13																																																																										13
TTAACA	1																																																																										1
TTAATC	1																																																																										1
TTAATT		1																																																																									1
TTACTT	1																																																																										1
TTAGAA	1																																																																										1
TTAGGA	1																																																																										1
TTAGGG	10	3																																																																									13
TTAGGT	1																																																																										1
TTAGTC	2																																																																										2
TTATAA	1	1																																																																									2
TTATAT	1	3																																																																									4
TTATTC		1	1																																																																								2
TTATTG	2																																																																										2
TTATTT	19																																																																										19
TTCCTC		1																																																																									1
TTCGCA	6																																																																										6
TTCTAT	1																																																																										1
TTCTCC			1																																																																								1
TTCTGG	1																																																																										1
TTCTTG	2																																																																										2
TTCTTT	3																																																																										3
TTGAAC	1																																																																										1
TTGATT	1																																																																										1
TTGCTT	1																																																																										1
TTGGAT	1																																																																										1
TTGGTT	1																																																																										1
TTGTCT	1																																																																										1
TTGTTA	1																																																																										1
TTGTTT	6																																																																										6
TTTAAA	2																																																																										2
TTTAAT	2																																																																										2
TTTACC		1																																																																									1
TTTATA	2																																																																										2
TTTATG	1																																																																										1
TTTATT	22	3																																																																									25
TTTCAG	1																																																																										1
TTTCAT	1																																																																										1
TTTCCC	1																																																																										1
TTTCCT	4																																																																										4
TTTCTT	17	1		1																																																																							19
TTTGCT	5	1																																																																									6
TTTGGC	1																																																																										1
TTTGGG	1																																																																										1
TTTGTC	1																																																																										1
TTTGTT	10																																																																										10
TTTTAA	7	1																																																																									8
TTTTAT	16	1		1																																																																							18
TTTTCA	2																																																																										2
TTTTCT	13																																																																										13
TTTTGA	1																																																																										1
TTTTGC	3																																																																										3
TTTTGT	5																																																																										5
TTTTTA	31	1																																																																									32
TTTTTC	13	1	1	1																																																																							16
TTTTTG	23	1																																																																									24

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	8	7	6	5	3	1	1		2								1																																								55
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1																																												1											1	3
AC/GT	-	-	-	2610	1657	1037	719	547	443	394	353	305	265	202	162	150	106	93	88	70	57	57	38	31	27	26	22	12	10	15	15	10	6	26	28	1																																							9582
AG/CT	-	-	-	1192	787	582	440	376	300	274	228	255	223	170	166	132	128	102	93	73	60	52	47	35	33	21	29	21	10	8	13	3	11	7	12	5																																							5888
AT/AT	-	-	-	407	193	95	74	37	12	4	4		1																																																														827
CG/CG	-	-	-	49	20	1	1																																																																				71
AAC/GTT	-	-	444	215	97	79	50	42	22	12	9	10	10	5	2	3	2	3	1	2			2	1																																																			1011
AAG/CTT	-	-	193	79	55	23	25	17	15	12	28	12	14	18	15	29	16	20	14	23	21	43	12																																																				684
AAT/ATT	-	-	324	130	71	49	24	21	31	27	24	18	22	28	27	29	27	21	19	20	49	154	12																																																				1127
ACC/GGT	-	-	608	219	104	40	19	16	14	3	5	1	1																																																														1030
ACG/CGT	-	-	13	4			1																																																																				18
ACT/AGT	-	-	43	30	12	16	14	15	15	10	12	8	6	10	10	10	11	15	5	4	8	8	5																																																				267
AGC/CTG	-	-	339	152	75	56	23	13	10	6		1	1				1	1																																																									678
AGG/CCT	-	-	559	324	196	112	80	57	37	23	16	10	7	6	4	3		1		2																																																							1437
ATC/ATG	-	-	268	160	137	88	68	50	39	34	34	21	30	14	13	21	14	7	6	3	3	7	1																																																				1018
CCG/CGG	-	-	143	60	32	12	5	1	1																																																																		254
AAAC/GTTT	-	689	236	101	38	14	5	2	1																																																																		1086
AAAG/CTTT	-	314	134	98	93	85	59	65	69	75	64	62	64	62	56	83	1																																																										1384
AAAT/ATTT	-	1725	934	599	354	283	220	175	97	71	41	30	14	4	5	1	1																																																										4554
AACC/GGTT	-	57	11	11	4	2	3	3	2			1	1			1																																																											96
AACG/CGTT	-	2	4		1																																																																						7
AACT/AGTT	-	23	13	6	9	6	6	1	1	3	8	4	8	3	2	4	2																																																										99
AAGC/CTTG	-	78	23	8	5	2		1																																																																			117
AAGG/CCTT	-	175	96	65	70	47	34	33	27	21	24	15	17	6	10	13	4																																																										657
AAGT/ACTT	-	21	12	11	8	7	4	8	1	8	5	1	2	1	7	6	5																																																										107
AATC/ATTG	-	103	53	28	25	17	8	10	3	7	3		2	1	3	1																																																											264
AATG/ATTC	-	166	121	71	42	36	25	15	4	3	2	3	1	2	2																																																												493
AATT/AATT	-	63	18	8	3	1	1	1				1																																																															96
ACAG/CTGT	-	115	82	60	41	20	20	10	8	7	5	2	2	1																																																													373
ACAT/ATGT	-	35	15	14	11	5	8	8	7	11	9	13	12	14	14	73	6																																																										255
ACCC/GGGT	-	109	20	3	1																																																																						133
ACCG/CGGT	-	2	1	1				1																																																																			5
ACCT/AGGT	-	22	9	9	4	7	1	1	1	3	1	1	3	1	2	1	4																																																										70
ACGC/CGTG	-	42	14	7	2	1	2				1																																																																69
ACGG/CCGT	-	6	2	3	1	2			1																																																																		15
ACTC/AGTG	-	33	29	9	5	7	5	2	4	4	3	3	1			2	1																																																										108
ACTG/AGTC	-	27	15	7	1	2	2		1																																																																		55
AGAT/ATCT	-	63	40	26	32	28	21	28	25	40	24	27	30	32	47	148	2																																																										613
AGCC/CTGG	-	59	14	10	4	2	1																																																																				90
AGCG/CGCT	-	22	6		1																																																																						29
AGCT/AGCT	-	4	4	1	1																																																																						10
AGGC/CCTG	-	130	56	19	5	4	4	1			1																																																																220
AGGG/CCCT	-	254	73	31	9	6	2	1																																																																			376
ATCC/ATGG	-	74	25	20	21	4	10	5	8	9	3	3	1		5		1																																																										189
ATCG/ATCG	-				1																																																																						1
ATGC/ATGC	-	26	4	1	2	1																																																																					34
CCCG/CGGG	-	26	7																																																																								33
CCGG/CCGG	-	3																																																																									3
AAAAC/GTTTT	1363	184	28	5	1	2	1																																																																				1584
AAAAG/CTTTT	552	83	26	14	2	2	2																																																																				681
AAAAT/ATTTT	1075	252	62	23	1	4	2		1																																																																		1420
AAACC/GGTTT	60	5	2																																																																								67
AAACG/CGTTT	28	1																																																																									29
AAACT/AGTTT	25	2	1																																																																								28
AAAGC/CTTTG	267	37	11		1																																																																						316
AAAGG/CCTTT	114	16	7	2	1	2		1	3																																																																		146
AAAGT/ACTTT	9	1																																																																									10
AAATC/ATTTG	69	27	1	1																																																																							98
AAATG/ATTTC	450	42	9	1	1																																																																						503
AAATT/AATTT	85	27	4	3																																																																							119
AACAC/GTGTT	53	7					1																																																																				61
AACAG/CTGTT	50	3	1		1																																																																						55
AACAT/ATGTT	17		1		1		1																																																																				20
AACCC/GGGTT	30	3	4	1																																																																							38
AACCG/CGGTT	3																																																																										3
AACCT/AGGTT	9					1																																																																					10
AACGC/CGTTG	1																																																																										1
AACTC/AGTTG	12	1																																																																									13
AACTG/AGTTC	21	4	1																																																																								26
AACTT/AAGTT	1																																																																										1
AAGAC/CTTGT	10	1	1																																																																								12
AAGAG/CTCTT	29	5	3	1	1		1	1		1																																																																	42
AAGAT/ATCTT	23	7	3	1			1	3																																																																			38
AAGCC/CTTGG	45	4																																																																									49
AAGCG/CGCTT	1																																																																										1
AAGCT/AGCTT	2																																																																										2
AAGGC/CCTTG	27	3	2																																																																								32
AAGGG/CCCTT	59	8	3	1			1																																																																				72
AAGGT/ACCTT	17																																																																										17
AAGTC/ACTTG	7	1																																																																									8
AAGTG/ACTTC	5																																																																										5
AATAC/ATTGT	26	1	6					1																																																																			34
AATAG/ATTCT	49	20	3	2	6																																																																						80
AATAT/ATATT	39	4	2	4	4	5	3	1	1	1	2																																																																66
AATCC/ATTGG	11	1			1																																																																						13
AATCT/AGATT	4	3	1								1																																																																9
AATGC/ATTGC	23	4																																																																									27
AATGG/ATTCC	25	1																																																																									26
AATGT/ACATT	18	1	1	1																																																																							21
AATTC/AATTG	20	3																																																																									23
ACACC/GGTGT	10	1																																																																									11
ACACT/AGTGT	9				1																																																																						10
ACAGC/CTGTG	9	2																																																																									11
ACAGG/CCTGT	22	1																																																																									23
ACAGT/ACTGT	29	2		1																																																																							32
ACATC/ATGTG	6																																																																										6
ACATG/ATGTC	7																																																																										7
ACCAG/CTGGT	4	1		1																																																																							6
ACCAT/ATGGT	4																																																																										4
ACCCC/GGGGT	397	64	17	1																																																																							479
ACCCG/CGGGT	5																																																																										5
ACCCT/AGGGT	4		1																																																																								5
ACCGC/CGGTG	1																																																																										1
ACCGG/CCGGT	2																																																																										2
ACCTC/AGGTG	6		1																																																																								7
ACCTG/AGGTC	12																																																																										12
ACGCC/CGTGG	6	3																																																																									9
ACGGC/CCGTG	3		1																																																																								4
ACGGG/CCCGT	3																																																																										3
ACTAG/AGTCT	1																																																																										1
ACTAT/AGTAT	15	5	1		1		1		1	1			1																																																														26
ACTCC/AGTGG	14																																																																										14
ACTCT/AGAGT	1																																																																										1
ACTGC/AGTGC	7	1																																																																									8
ACTGG/AGTCC	9																																																																										9
AGAGC/CTCTG	15	3																																																																									18
AGAGG/CCTCT	46	13	3																																																																								62
AGATC/ATCTG	11																																																																										11
AGATG/ATCTC	7	1																																																																									8
AGCAT/ATGCT	8	1					1																																																																				10
AGCCC/CTGGG	44	8	1			1	1																																																																				55
AGCCG/CGGCT	4																																																																										4
AGCCT/AGGCT	4																																																																										4
AGCGC/CGCTG	1																																																																										1
AGCGG/CCGCT	4																																																																										4
AGCTC/AGCTG	12	1																																																																									13
AGGAT/ATCCT	3	4																																																																									7
AGGCC/CCTGG	25	9																																																																									34
AGGCG/CCTCG	8	4																																																																									12
AGGGC/CCCTG	30	5	1																																																																								36
AGGGG/CCCCT	157	19	11	2	2																																																																						191
ATATC/ATATG	7				1																																																																						8
ATCCC/ATGGG	18	3	1		1																																																																						23
ATCCG/ATCGG	1																																																																										1
ATGCC/ATGGC	12	2																																																																									14
CCCCG/CGGGG	18	2	1																																																																								21
CCCGG/CCGGG	14	1																																																																									15
CCGCG/CGCGG	1																																																																										1
AAAAAC/GTTTTT	135	6	1																																																																								142
AAAAAG/CTTTTT	108	7	1	2																																																																							118
AAAAAT/ATTTTT	247	12	1	1						1																																																																	262
AAAACC/GGTTTT	12																																																																										12
AAAACT/AGTTTT	3																																																																										3
AAAAGC/CTTTTG	17	1	1																																																																								19
AAAAGG/CCTTTT	16																																																																										16
AAAAGT/ACTTTT	2																																																																										2
AAAATC/ATTTTG	5																																																																										5
AAAATG/ATTTTC	7																																																																										7
AAAATT/AATTTT	24	2																																																																									26
AAACAC/GTGTTT	2																																																																										2
AAACAT/ATGTTT	2																																																																										2
AAACCC/GGGTTT	2																																																																										2
AAACCT/AGGTTT	3																																																																										3
AAACTG/AGTTTC	2																																																																										2
AAAGAC/CTTTGT	3																																																																										3
AAAGAG/CTCTTT	12																																																																										12
AAAGAT/ATCTTT	2																																																																										2
AAAGCC/CTTTGG	4																																																																										4
AAAGCG/CGCTTT	1																																																																										1
AAAGGG/CCCTTT	7																																																																										7
AAAGGT/ACCTTT	21	1																																																																									22
AAATAC/ATTTGT	2	1																																																																									3
AAATAG/ATTTCT	7				1																																																																						8
AAATAT/ATATTT	34	6	1		1																																																																						42
AAATCC/ATTTGG	2																																																																										2
AAATCT/AGATTT	2																																																																										2
AAATGG/ATTTCC	4																																																																										4
AAATTC/AATTTG	3																																																																										3
AAATTG/AATTTC	3																																																																										3
AAATTT/AAATTT	3																																																																										3
AACAAG/CTTGTT	2																																																																										2
AACAAT/ATTGTT	6																																																																										6
AACACC/GGTGTT	4	1																																																																									5
AACACT/AGTGTT	3			1																																																																							4
AACAGC/CTGTTG	7		1																																																																								8
AACATG/ATGTTC	1																																																																										1
AACATT/AATGTT	1																																																																										1
AACCAC/GGTTGT	3																																																																										3
AACCAG/CTGGTT	1																																																																										1
AACCCC/GGGGTT	3	1																																																																									4
AACCCT/AGGGTT	117	21	3	2		1																																																																					144
AACCTT/AAGGTT	1																																																																										1
AACTAC/AGTTGT	3	1																																																																									4
AACTAG/AGTTCT	1																																																																										1
AACTAT/AGTTAT	1																																																																										1
AACTCT/AGAGTT	2																																																																										2
AACTGG/AGTTCC		1																																																																									1
AACTTG/AAGTTC	2																																																																										2
AAGAAT/ATTCTT	7	2	3	1																																																																							13
AAGACC/CTTGGT	1																																																																										1
AAGACG/CGTCTT	3																																																																										3
AAGACT/AGTCTT	3	1																																																																									4
AAGAGG/CCTCTT	18	4					1																																																																				23
AAGAGT/ACTCTT	1																																																																										1
AAGATC/ATCTTG	1																																																																										1
AAGATG/ATCTTC	1																																																																										1
AAGATT/AATCTT	2																																																																										2
AAGCAG/CTGCTT	3	1																																																																									4
AAGCCC/CTTGGG	1																																																																										1
AAGCGG/CCGCTT	1																																																																										1
AAGGAC/CCTTGT	1	1																																																																									2
AAGGAG/CCTTCT	9	1	1			1		1																																																																			13
AAGGAT/ATCCTT	1																																																																										1
AAGGGC/CCCTTG	2																																																																										2
AAGGGG/CCCCTT	5																																																																										5
AAGGTC/ACCTTG	1																																																																										1
AAGTCC/ACTTGG	4																																																																										4
AAGTGG/ACTTCC	1																																																																										1
AATACC/ATTGGT	1																																																																										1
AATACG/ATTCGT	1																																																																										1
AATACT/AGTATT	2		1		1																																																																						4
AATAGC/ATTGCT	2																																																																										2
AATAGG/ATTCCT	1																																																																										1
AATAGT/ACTATT	2	2																																																																									4
AATATC/ATATTG	2	1																																																																									3
AATATG/ATATTC	5		1																																																																								6
AATATT/AATATT	2																																																																										2
AATCAG/ATTCTG	5	1																																																																									6
AATCAT/ATGATT	3	1	1																																																																								5
AATCCC/ATTGGG	1	1																																																																									2
AATCCT/AGGATT	3																																																																										3
AATCTG/AGATTC	1																																																																										1
AATGAC/ATTGTC	4	1																																																																									5
AATGAG/ATTCTC	2																																																																										2
AATGAT/ATCATT	1																																																																										1
AATGCC/ATTGGC	1																																																																										1
AATGCG/ATTCGC	31																																																																										31
AATGCT/AGCATT	2			1																																																																							3
AATTAC/AATTGT	1																																																																										1
AATTAG/AATTCT	3																																																																										3
AATTAT/AATTAT	6	1																																																																									7
AATTCC/AATTGG	1																																																																										1
ACACAG/CTGTGT	2	3				1																																																																					6
ACACAT/ATGTGT	8																																																																										8
ACACCC/GGGTGT	26	5	1																																																																								32
ACACGC/CGTGTG	7		1																																																																								8
ACACGT/ACGTGT	1																																																																										1
ACACTC/AGTGTG	2																																																																										2
ACAGAG/CTCTGT	15	5	1	3																																																																							24
ACAGCC/CTGTGG	1																																																																										1
ACAGCT/AGCTGT	2																																																																										2
ACAGGG/CCCTGT	2																																																																										2
ACAGTG/ACTGTC	1																																																																										1
ACATAT/ATATGT	3		2	1																																																																							6
ACATCC/ATGTGG	1																																																																										1
ACATGC/ATGTGC	4																																																																										4
ACATGT/ACATGT	1																																																																										1
ACCACG/CGTGGT		1																																																																									1
ACCACT/AGTGGT	1																																																																										1
ACCAGC/CTGGTG	2	2																																																																									4
ACCAGG/CCTGGT	1																																																																										1
ACCATC/ATGGTG	6	1																																																																									7
ACCCAT/ATGGGT	1																																																																										1
ACCCCC/GGGGGT	77	2	1																																																																								80
ACCCCT/AGGGGT	2																																																																										2
ACCCTC/AGGGTG	3																																																																										3
ACCGAG/CGGTCT	1																																																																										1
ACCGAT/ATCGGT	1																																																																										1
ACCGCC/CGGTGG	3																																																																										3
ACCGGG/CCCGGT	1																																																																										1
ACCTAT/AGGTAT	1																																																																										1
ACCTCC/AGGTGG	11																																																																										11
ACCTCT/AGAGGT			1																																																																								1
ACGAGG/CCTCGT	2																																																																										2
ACGATG/ATCGTC		1																																																																									1
ACGCAG/CGTCTG	1																																																																										1
ACGCCC/CGTGGG	1																																																																										1
ACGCGC/CGCGTG	2																																																																										2
ACGCTC/AGCGTG	1																																																																										1
ACGTGC/ACGTGC	1																																																																										1
ACTCAG/AGTCTG	1																																																																										1
ACTCAT/AGTATG		1																																																																									1
ACTCCC/AGTGGG		1																																																																									1
ACTCCG/AGTCGG	2																																																																										2
ACTCCT/AGGAGT	3																																																																										3
ACTCTC/AGAGTG	1					1																																																																					2
ACTCTG/AGAGTC	2																																																																										2
ACTGAT/AGTATC	1																																																																										1
ACTGCC/AGTGGC	4																																																																										4
ACTGCT/AGCAGT	4																																																																										4
ACTGGG/AGTCCC	1																																																																										1
AGAGAT/ATCTCT	7		1																																																																								8
AGAGCC/CTCTGG	3																																																																										3
AGAGCG/CGCTCT	2																																																																										2
AGAGGC/CCTCTG	10	1																																																																									11
AGAGGG/CCCTCT	9	3																																																																									12
AGATAT/ATATCT	16	8	5	2	1	2																																																																					34
AGATCC/ATCTGG		1																																																																									1
AGATCT/AGATCT	1																																																																										1
AGATGC/ATCTGC	2																																																																										2
AGATGG/ATCTCC	2																																																																										2
AGCAGG/CCTGCT	4																																																																										4
AGCCAT/ATGGCT			1																																																																								1
AGCCCC/CTGGGG	4	1																																																																									5
AGCCGC/CGGCTG	2																																																																										2
AGCCGG/CCGGCT	2																																																																										2
AGCGGC/CCGCTG	5																																																																										5
AGCGGG/CCCGCT	1																																																																										1
AGCTCC/AGCTGG	2																																																																										2
AGCTGC/AGCTGC	1																																																																										1
AGGATC/ATCCTG	2																																																																										2
AGGATG/ATCCTC	3																																																																										3
AGGCCC/CCTGGG	1																																																																										1
AGGCGG/CCGCCT	5	1																																																																									6
AGGGAT/ATCCCT	1																																																																										1
AGGGGC/CCCCTG	3																																																																										3
AGGGGG/CCCCCT	29	4																																																																									33
ATATCC/ATATGG	1																																																																										1
ATATGC/ATATGC	1																																																																										1
ATCATG/ATCATG	1																																																																										1
ATCCCC/ATGGGG	2																																																																										2
ATCCGC/ATGCGG	5																																																																										5
ATGGCC/ATGGCC	1																																																																										1
CCCCCG/CGGGGG	4	2																																																																									6
CCCCGG/CCGGGG	2																																																																										2
CCCGCG/CGCGGG	1																																																																										1
