Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_049481365.1/fasta/hub_GCA_049481365.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              4839
Total size of examined sequences (bp):           28279160
Total number of identified SSRs:                 15497
Number of SSR containing sequences:              2597
Number of sequences containing more than 1 SSR:  1746
Number of SSRs present in compound formation:    2077


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	11
2	10968
3	3477
4	307
5	185
6	549

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	229	230	231	232	233	234	235	236	237	238	239	240	241	242	243	244	245	246	247	248	249	250	251	252	253	254	255	256	257	258	259	260	261	262	263	264	265	266	267	268	269	270	271	272	273	274	275	276	277	278	279	280	281	282	283	284	285	286	287	288	289	290	291	292	293	294	295	296	297	298	299	300	301	302	303	304	305	306	307	308	309	310	311	312	313	314	315	316	317	318	319	320	321	322	323	324	325	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-												1								1									1																																																																																																																																																																																																																																																																																						3
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1		1							1																																																							1																																																																																																																																																																																																																																																	4
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-				1										1																																																																			1										1																																																																																																																																																																																																																								4
AC	-	-	-	654	409	264	220	124	65	66	48	38	21	12	11	12	15	7	8	5	2	2	1	1	4		1	1			2				1	2																																																																																																																																																																																																																							1																																				1																																					1998
AG	-	-	-	217	116	85	38	22	18	7	2	1		2	3	3	2	1				1	1																																																																																																																																																																																																																																																																																																													519
AT	-	-	-	388	235	171	164	119	95	83	68	56	20	27	21	22	18	11	9	7	10	2	3		2	2	3							1																																																																																																																																																																																																																																																																																																		1537
CA	-	-	-	509	296	199	125	92	54	40	31	13	17	14	9	6	4	5	5	3	7	2		1				1			1	1			1		1																																																																																																																																																																																																																					1																																																																										1438
CG	-	-	-	2																																																																																																																																																																																																																																																																																																																																2
CT	-	-	-	178	84	48	32	14	9	2			2	1																																																																																																																																																																																																																																																																																																																						370
GA	-	-	-	110	60	41	21	8	5	5	2	1	2	1	1			1				1																																																																																																																																																																																																																																																																																																														259
GC	-	-	-	3	1																																																																																																																																																																																																																																																																																																																															4
GT	-	-	-	418	292	162	112	65	50	35	19	22	14	10	7	7	5	8	4	1			1	2	1					1	1						1																																																																																																																																																																																																																																																																																															1238
TA	-	-	-	296	165	121	112	84	67	44	34	29	30	25	16	8	9	6	8	3	5	5	2	2	3		2			2																																																																																																																																																																																																																																																																																																						1078
TC	-	-	-	184	114	54	28	17	11	6	10	1	2	2	1		1	1		1	1	1				2				1																																																																																																																																																																																																																																																																																																						438
TG	-	-	-	686	425	289	209	150	76	65	39	27	26	23	23	7	5	5	5	6	3	1	3	1	1	1	1	1	1					1		3																																																																																																																																																																		1																																																												1																																								1																									1	2087
AAC	-	-	61	22	8	2		1																																																																																																																																																																																																																																																																																																																												94
AAG	-	-	20	8	1	1																																																																																																																																																																																																																																																																																																																														30
AAT	-	-	10	2	1																																																																																																																																																																																																																																																																																																																															13
ACA	-	-	100	36	17	4	2																																																																																																																																																																																																																																																																																																																													159
ACC	-	-	12	5																																																																																																																																																																																																																																																																																																																																17
ACG	-	-	22	9	1																																																																																																																																																																																																																																																																																																																															32
ACT	-	-	131	62	26	8	4	2								1																																																																																																																																																																																																																																																																																																																				234
AGA	-	-	27	4		1																																																																																																																																																																																																																																																																																																																														32
AGC	-	-	32	4																																																																																																																																																																																																																																																																																																																																36
AGG	-	-	6																																																																																																																																																																																																																																																																																																																																	6
AGT	-	-	111	42	18	11	4		1		1																																																																																																																																																																																																																																																																																																																									188
ATA	-	-	5																																																																																																																																																																																																																																																																																																																																	5
ATC	-	-	9	6																																																																																																																																																																																																																																																																																																																																15
ATG	-	-	15	6	1	2																																																																																																																																																																																																																																																																																																																														24
ATT	-	-	6	2	1																																																																																																																																																																																																																																																																																																																															9
CAA	-	-	82	19	8	4	1																																																																																																																																																																																																																																																																																																																													114
CAC	-	-	30	8	5		1																																																																																																																																																																																																																																																																																																																													44
CAG	-	-	57	12	1																																																																																																																																																																																																																																																																																																																															70
CAT	-	-	42	9	1																																																																																																																																																																																																																																																																																																																															52
CCA	-	-	25	6	2	1		1																																																																																																																																																																																																																																																																																																																												35
CCG	-	-	6		2																																																																																																																																																																																																																																																																																																																															8
CCT	-	-	10	1																																																																																																																																																																																																																																																																																																																																11
CGA	-	-	26	6	2																																																																																																																																																																																																																																																																																																																															34
CGC	-	-	18	6	2																																																																																																																																																																																																																																																																																																																															26
CGG	-	-	6	1	1			1																																																																																																																																																																																																																																																																																																																												9
CGT	-	-	20	9	3																																																																																																																																																																																																																																																																																																																															32
CTA	-	-	55	33	18	5	6	2	1																																																																																																																																																																																																																																																																																																																											120
CTC	-	-	8	1	1																																																																																																																																																																																																																																																																																																																															10
CTG	-	-	53	17	8	1																																																																																																																																																																																																																																																																																																																														79
CTT	-	-	26	12	2																																																																																																																																																																																																																																																																																																																															40
GAA	-	-	45	5	6																																																																																																																																																																																																																																																																																																																															56
GAC	-	-	17	3	2	1	1																																																																																																																																																																																																																																																																																																																													24
GAG	-	-	7	3																																																																																																																																																																																																																																																																																																																																10
GAT	-	-	20	6	2		1																																																																																																																																																																																																																																																																																																																													29
GCA	-	-	47	12	2							1																																																																																																																																																																																																																																																																																																																								62
GCC	-	-	12	3	2	1																																																																																																																																																																																																																																																																																																																														18
GCG	-	-	19	4		2																																																																																																																																																																																																																																																																																																																														25
GCT	-	-	33	12	2	1																																																																																																																																																																																																																																																																																																																														48
GGA	-	-	8	2																																																																																																																																																																																																																																																																																																																																10
GGC	-	-	12	5		2																																																																																																																																																																																																																																																																																																																														19
GGT	-	-	28	10	1																																																																																																																																																																																																																																																																																																																															39
GTA	-	-	112	53	15	7	3	2		1																																																																																																																																																																																																																																																																																																																										193
GTC	-	-	16	6																																																																																																																																																																																																																																																																																																																																22
GTG	-	-	41	13	1																																																																																																																																																																																																																																																																																																																															55
GTT	-	-	49	18	5	1																																																																																																																																																																																																																																																																																																																														73
TAA	-	-	5	6																																																																																																																																																																																																																																																																																																																																11
TAC	-	-	97	27	18	7			1																																																																																																																																																																																																																																																																																																																											150
TAG	-	-	198	86	29	14	4		1																																																																																																																																																																																																																																																																																																																											332
TAT	-	-	3	1											1																																																																																																																																																																																																																																																																																																																					5
TCA	-	-	18	8	2																																																																																																																																																																																																																																																																																																																															28
TCC	-	-	13	2			1																																																																																																																																																																																																																																																																																																																													16
TCG	-	-	29	8	2																																																																																																																																																																																																																																																																																																																															39
TCT	-	-	42	12	1	2		1																																																																																																																																																																																																																																																																																																																												58
TGA	-	-	11	2	1																																																																																																																																																																																																																																																																																																																															14
TGC	-	-	47	6	4	1																																																																																																																																																																																																																																																																																																																														58
TGG	-	-	14	5		1																																																																																																																																																																																																																																																																																																																														20
TGT	-	-	157	67	20	7	2																																																																																																																																																																																																																																																																																																																													253
TTA	-	-	3	2	1	3																																																																																																																																																																																																																																																																																																																														9
TTC	-	-	23	4	3																																																																																																																																																																																																																																																																																																																															30
TTG	-	-	121	49	17	5	1																																																																																																																																																																																																																																																																																																																													193
AAAC	-	3																																																																																																																																																																																																																																																																																																																																		3
AAAG	-	6																																																																																																																																																																																																																																																																																																																																		6
AAAT	-	5																																																																																																																																																																																																																																																																																																																																		5
AACA	-	1																																																																																																																																																																																																																																																																																																																																		1
AAGA	-	3	1																																																																																																																																																																																																																																																																																																																																	4
AAGC	-	1																																																																																																																																																																																																																																																																																																																																		1
AATA	-	2			1																																																																																																																																																																																																																																																																																																																															3
ACAA	-	2	1																																																																																																																																																																																																																																																																																																																																	3
ACAT	-	30	5	1	1																																																																																																																																																																																																																																																																																																																															37
ACTC	-		1																																																																																																																																																																																																																																																																																																																																	1
AGAC	-	1																																																																																																																																																																																																																																																																																																																																		1
AGAT	-	1		1																																																																																																																																																																																																																																																																																																																																2
AGCA	-	1																																																																																																																																																																																																																																																																																																																																		1
AGGG	-	3																																																																																																																																																																																																																																																																																																																																		3
AGTG	-	1																																																																																																																																																																																																																																																																																																																																		1
ATAA	-	2	1		1	1																																																																																																																																																																																																																																																																																																																														5
ATAC	-	24	8	1																																																																																																																																																																																																																																																																																																																																33
ATAG	-	4	1	3																																																																																																																																																																																																																																																																																																																																8
ATCT	-	1																																																																																																																																																																																																																																																																																																																																		1
ATGT	-	18	3																																																																																																																																																																																																																																																																																																																																	21
ATTT	-		1																																																																																																																																																																																																																																																																																																																																	1
CACT	-	3	1	1																																																																																																																																																																																																																																																																																																																																5
CATA	-	13	4																																																																																																																																																																																																																																																																																																																																	17
CCTA	-	1																																																																																																																																																																																																																																																																																																																																		1
CCTC	-	1																																																																																																																																																																																																																																																																																																																																		1
CGTA	-	1																																																																																																																																																																																																																																																																																																																																		1
CTAC	-	1																																																																																																																																																																																																																																																																																																																																		1
CTAT	-		1																																																																																																																																																																																																																																																																																																																																	1
CTCA	-	1	1																																																																																																																																																																																																																																																																																																																																	2
CTTT	-	2																																																																																																																																																																																																																																																																																																																																		2
GAAA	-	3																																																																																																																																																																																																																																																																																																																																		3
GAGG	-	1																																																																																																																																																																																																																																																																																																																																		1
GAGT	-	2																																																																																																																																																																																																																																																																																																																																		2
GATA	-		1																																																																																																																																																																																																																																																																																																																																	1
GCAC	-	2																																																																																																																																																																																																																																																																																																																																		2
GGAG	-	1																																																																																																																																																																																																																																																																																																																																		1
GTAA	-	2																																																																																																																																																																																																																																																																																																																																		2
GTAT	-	9		1																																																																																																																																																																																																																																																																																																																																10
GTGA	-	2																																																																																																																																																																																																																																																																																																																																		2
GTTT	-	1																																																																																																																																																																																																																																																																																																																																		1
TAAA	-	1	1																																																																																																																																																																																																																																																																																																																																	2
TACA	-	7	1																																																																																																																																																																																																																																																																																																																																	8
TACG	-	1																																																																																																																																																																																																																																																																																																																																		1
TAGA	-	1			1																																																																																																																																																																																																																																																																																																																															2
TATC	-	3	2	2			1																																																																																																																																																																																																																																																																																																																													8
TATG	-	25	3	2																																																																																																																																																																																																																																																																																																																																30
TATT	-	4	2																																																																																																																																																																																																																																																																																																																																	6
TCAC	-	1																																																																																																																																																																																																																																																																																																																																		1
TCTA	-	4	1	1																																																																																																																																																																																																																																																																																																																																6
TCTG	-		1																																																																																																																																																																																																																																																																																																																																	1
TCTT	-	6	2																																																																																																																																																																																																																																																																																																																																	8
TGAT	-	1																																																																																																																																																																																																																																																																																																																																		1
TGCA	-	1																																																																																																																																																																																																																																																																																																																																		1
TGCT	-	1																																																																																																																																																																																																																																																																																																																																		1
TGTA	-	17		1																																																																																																																																																																																																																																																																																																																																18
TGTC	-			1																																																																																																																																																																																																																																																																																																																																1
TGTT	-	1	1																																																																																																																																																																																																																																																																																																																																	2
TTAC	-	1	1																																																																																																																																																																																																																																																																																																																																	2
TTAT	-	1																																																																																																																																																																																																																																																																																																																																		1
TTCT	-	1																																																																																																																																																																																																																																																																																																																																		1
TTGT	-	1																																																																																																																																																																																																																																																																																																																																		1
TTTA	-	1	1																																																																																																																																																																																																																																																																																																																																	2
TTTC	-	4																																																																																																																																																																																																																																																																																																																																		4
TTTG	-	2																																																																																																																																																																																																																																																																																																																																		2
AAAAG	3																																																																																																																																																																																																																																																																																																																																			3
AAAAT	1																																																																																																																																																																																																																																																																																																																																			1
AAAGA	2	1																																																																																																																																																																																																																																																																																																																																		3
AAAGC	2																																																																																																																																																																																																																																																																																																																																			2
AAAGT	1																																																																																																																																																																																																																																																																																																																																			1
AAATA	1																																																																																																																																																																																																																																																																																																																																			1
AACAG	1																																																																																																																																																																																																																																																																																																																																			1
AAGAA	5																																																																																																																																																																																																																																																																																																																																			5
AAGGA	3																																																																																																																																																																																																																																																																																																																																			3
AAGGG	1																																																																																																																																																																																																																																																																																																																																			1
AAGTG	1																																																																																																																																																																																																																																																																																																																																			1
AATAG	1																																																																																																																																																																																																																																																																																																																																			1
ACAAA	1																																																																																																																																																																																																																																																																																																																																			1
ACAAC	3																																																																																																																																																																																																																																																																																																																																			3
ACACA	1	1																																																																																																																																																																																																																																																																																																																																		2
ACACT	2																																																																																																																																																																																																																																																																																																																																			2
ACCAA	1																																																																																																																																																																																																																																																																																																																																			1
ACCCC	2																																																																																																																																																																																																																																																																																																																																			2
ACCGC	1																																																																																																																																																																																																																																																																																																																																			1
ACGCT	1																																																																																																																																																																																																																																																																																																																																			1
ACTCG	3																																																																																																																																																																																																																																																																																																																																			3
ACTGT	1																																																																																																																																																																																																																																																																																																																																			1
AGAAG	2	1																																																																																																																																																																																																																																																																																																																																		3
AGAGA	1																																																																																																																																																																																																																																																																																																																																			1
AGAGC	1																																																																																																																																																																																																																																																																																																																																			1
AGAGG	1																																																																																																																																																																																																																																																																																																																																			1
AGCAA	1																																																																																																																																																																																																																																																																																																																																			1
AGGGC	1																																																																																																																																																																																																																																																																																																																																			1
AGGGG	1																																																																																																																																																																																																																																																																																																																																			1
AGTTT	1																																																																																																																																																																																																																																																																																																																																			1
ATGCA	2																																																																																																																																																																																																																																																																																																																																			2
CACCA	1																																																																																																																																																																																																																																																																																																																																			1
CACCT		1																																																																																																																																																																																																																																																																																																																																		1
CAGCA	1																																																																																																																																																																																																																																																																																																																																			1
CATGC	1																																																																																																																																																																																																																																																																																																																																			1
CATTA	1																																																																																																																																																																																																																																																																																																																																			1
CCCCT	1																																																																																																																																																																																																																																																																																																																																			1
CCCGC	1																																																																																																																																																																																																																																																																																																																																			1
CCCTC	1																																																																																																																																																																																																																																																																																																																																			1
CCCTG	1																																																																																																																																																																																																																																																																																																																																			1
CCGCA	1																																																																																																																																																																																																																																																																																																																																			1
CCGCC	3																																																																																																																																																																																																																																																																																																																																			3
CCGGC	1																																																																																																																																																																																																																																																																																																																																			1
CCGGG	1																																																																																																																																																																																																																																																																																																																																			1
CCTAC	1																																																																																																																																																																																																																																																																																																																																			1
CCTCG	1																																																																																																																																																																																																																																																																																																																																			1
CCTCT	1																																																																																																																																																																																																																																																																																																																																			1
CCTTC	1																																																																																																																																																																																																																																																																																																																																			1
CGAGC	1																																																																																																																																																																																																																																																																																																																																			1
CGAGT	1																																																																																																																																																																																																																																																																																																																																			1
CGCCG	1																																																																																																																																																																																																																																																																																																																																			1
CGCTG	1																																																																																																																																																																																																																																																																																																																																			1
CGGCG	1																																																																																																																																																																																																																																																																																																																																			1
CTAGA	1																																																																																																																																																																																																																																																																																																																																			1
CTCCT	2																																																																																																																																																																																																																																																																																																																																			2
CTCTC	2																																																																																																																																																																																																																																																																																																																																			2
CTGCA	1																																																																																																																																																																																																																																																																																																																																			1
CTGCG	2																																																																																																																																																																																																																																																																																																																																			2
CTTCT	1																																																																																																																																																																																																																																																																																																																																			1
CTTTC	3																																																																																																																																																																																																																																																																																																																																			3
GAAAA	2	1																																																																																																																																																																																																																																																																																																																																		3
GAAAG		1																																																																																																																																																																																																																																																																																																																																		1
GAAGA	1																																																																																																																																																																																																																																																																																																																																			1
GACAA	1																																																																																																																																																																																																																																																																																																																																			1
GAGAG	3																																																																																																																																																																																																																																																																																																																																			3
GAGGG	2																																																																																																																																																																																																																																																																																																																																			2
GAGTG	1																																																																																																																																																																																																																																																																																																																																			1
GCATG	1																																																																																																																																																																																																																																																																																																																																			1
GCCCG	1																																																																																																																																																																																																																																																																																																																																			1
GCCGT	1																																																																																																																																																																																																																																																																																																																																			1
GCGGC	1																																																																																																																																																																																																																																																																																																																																			1
GCGGG	2	1																																																																																																																																																																																																																																																																																																																																		3
GCGTG	1																																																																																																																																																																																																																																																																																																																																			1
GCTCG	1																																																																																																																																																																																																																																																																																																																																			1
GCTGC	2																																																																																																																																																																																																																																																																																																																																			2
GGAAG	1																																																																																																																																																																																																																																																																																																																																			1
GGCAG	1																																																																																																																																																																																																																																																																																																																																			1
GGCGG	6																																																																																																																																																																																																																																																																																																																																			6
GGCGT	1																																																																																																																																																																																																																																																																																																																																			1
GGGAG	1																																																																																																																																																																																																																																																																																																																																			1
GGGCA	1																																																																																																																																																																																																																																																																																																																																			1
GGGCG	4																																																																																																																																																																																																																																																																																																																																			4
GGGGA	1																																																																																																																																																																																																																																																																																																																																			1
GGGGC	2																																																																																																																																																																																																																																																																																																																																			2
GGGGT	1																																																																																																																																																																																																																																																																																																																																			1
GGTGT	1																																																																																																																																																																																																																																																																																																																																			1
GTAAA	1																																																																																																																																																																																																																																																																																																																																			1
GTAAG	1																																																																																																																																																																																																																																																																																																																																			1
GTCGT	1																																																																																																																																																																																																																																																																																																																																			1
GTGCG	1																																																																																																																																																																																																																																																																																																																																			1
GTGGT		1																																																																																																																																																																																																																																																																																																																																		1
GTGTG	1																																																																																																																																																																																																																																																																																																																																			1
GTTGT	1																																																																																																																																																																																																																																																																																																																																			1
GTTTT	1																																																																																																																																																																																																																																																																																																																																			1
TAAAC	2																																																																																																																																																																																																																																																																																																																																			2
TAAAG	1																																																																																																																																																																																																																																																																																																																																			1
TAATA	1																																																																																																																																																																																																																																																																																																																																			1
TACCT	1																																																																																																																																																																																																																																																																																																																																			1
TACGT	1																																																																																																																																																																																																																																																																																																																																			1
TAGTG	1																																																																																																																																																																																																																																																																																																																																			1
TCCCC	1																																																																																																																																																																																																																																																																																																																																			1
TCCTT		1																																																																																																																																																																																																																																																																																																																																		1
TCGCG	1																																																																																																																																																																																																																																																																																																																																			1
TCTCT	2																																																																																																																																																																																																																																																																																																																																			2
TCTTT	3																																																																																																																																																																																																																																																																																																																																			3
TGCAA	1																																																																																																																																																																																																																																																																																																																																			1
TGCAT	1																																																																																																																																																																																																																																																																																																																																			1
TGCGG	1																																																																																																																																																																																																																																																																																																																																			1
TGGGC	1																																																																																																																																																																																																																																																																																																																																			1
TGGGG		1																																																																																																																																																																																																																																																																																																																																		1
TGTAA	1																																																																																																																																																																																																																																																																																																																																			1
TGTAC	1																																																																																																																																																																																																																																																																																																																																			1
TGTAG	1																																																																																																																																																																																																																																																																																																																																			1
TGTCC	1																																																																																																																																																																																																																																																																																																																																			1
TGTGT	2																																																																																																																																																																																																																																																																																																																																			2
TGTTT	1																																																																																																																																																																																																																																																																																																																																			1
TTACT	2																																																																																																																																																																																																																																																																																																																																			2
TTAGA	1																																																																																																																																																																																																																																																																																																																																			1
TTATC	2																																																																																																																																																																																																																																																																																																																																			2
TTATG	1																																																																																																																																																																																																																																																																																																																																			1
TTCTC	1																																																																																																																																																																																																																																																																																																																																			1
TTCTT	2																																																																																																																																																																																																																																																																																																																																			2
TTTCC		2																																																																																																																																																																																																																																																																																																																																		2
TTTCT	4																																																																																																																																																																																																																																																																																																																																			4
TTTGC	2																																																																																																																																																																																																																																																																																																																																			2
TTTTA	1																																																																																																																																																																																																																																																																																																																																			1
TTTTC	1																																																																																																																																																																																																																																																																																																																																			1
AAACCC						1		1																																																																																																																																																																																																																																																																																																																												2
AAAGAG	3																																																																																																																																																																																																																																																																																																																																			3
AACAAT	2																																																																																																																																																																																																																																																																																																																																			2
AACACA		1																																																																																																																																																																																																																																																																																																																																		1
AACACC	1																																																																																																																																																																																																																																																																																																																																			1
AACAGT	1																																																																																																																																																																																																																																																																																																																																			1
AACCCA	2			1				2	1																																																																																																																																																																																																																																																																																																																											6
AACCCT			1	1			1	1																																																																																																																																																																																																																																																																																																																												4
AAGAGA	1																																																																																																																																																																																																																																																																																																																																			1
AAGAGG	2																																																																																																																																																																																																																																																																																																																																			2
AAGAGT	1																																																																																																																																																																																																																																																																																																																																			1
AATAAC	1																																																																																																																																																																																																																																																																																																																																			1
AATACT	1																																																																																																																																																																																																																																																																																																																																			1
AATAGT	2																																																																																																																																																																																																																																																																																																																																			2
ACAAAC	1																																																																																																																																																																																																																																																																																																																																			1
ACAACG	2																																																																																																																																																																																																																																																																																																																																			2
ACACAA	2																																																																																																																																																																																																																																																																																																																																			2
ACACAG	1																																																																																																																																																																																																																																																																																																																																			1
ACACAT	12	1																																																																																																																																																																																																																																																																																																																																		13
ACACCC	1																																																																																																																																																																																																																																																																																																																																			1
ACACTA	9																																																																																																																																																																																																																																																																																																																																			9
ACAGCA	6																																																																																																																																																																																																																																																																																																																																			6
ACATAC	3																																																																																																																																																																																																																																																																																																																																			3
ACATAT	2																																																																																																																																																																																																																																																																																																																																			2
ACCACT		2																																																																																																																																																																																																																																																																																																																																		2
ACCCAA				1																																																																																																																																																																																																																																																																																																																																1
ACCGCA	1																																																																																																																																																																																																																																																																																																																																			1
ACGATG	1																																																																																																																																																																																																																																																																																																																																			1
ACGGCT	2																																																																																																																																																																																																																																																																																																																																			2
ACTACA	1																																																																																																																																																																																																																																																																																																																																			1
ACTAGT	1																																																																																																																																																																																																																																																																																																																																			1
ACTATC	1																																																																																																																																																																																																																																																																																																																																			1
ACTATT	4																																																																																																																																																																																																																																																																																																																																			4
AGAAAG	4		1																																																																																																																																																																																																																																																																																																																																	5
AGAAGG	2																																																																																																																																																																																																																																																																																																																																			2
AGAAGT	1																																																																																																																																																																																																																																																																																																																																			1
AGAGAA	5																																																																																																																																																																																																																																																																																																																																			5
AGAGCG	1																																																																																																																																																																																																																																																																																																																																			1
AGAGGG	1																																																																																																																																																																																																																																																																																																																																			1
AGCACT	1																																																																																																																																																																																																																																																																																																																																			1
AGCCGT	1																																																																																																																																																																																																																																																																																																																																			1
AGGCAA	1																																																																																																																																																																																																																																																																																																																																			1
AGGGTT			1			1																																																																																																																																																																																																																																																																																																																														2
AGGTGA	1																																																																																																																																																																																																																																																																																																																																			1
AGTAGA	1																																																																																																																																																																																																																																																																																																																																			1
AGTCCA	1																																																																																																																																																																																																																																																																																																																																			1
AGTCTG	1																																																																																																																																																																																																																																																																																																																																			1
AGTGAG	1																																																																																																																																																																																																																																																																																																																																			1
AGTGAT	1																																																																																																																																																																																																																																																																																																																																			1
AGTGGG	1																																																																																																																																																																																																																																																																																																																																			1
AGTGGT	2																																																																																																																																																																																																																																																																																																																																			2
ATAACA	2																																																																																																																																																																																																																																																																																																																																			2
ATAAGA	1																																																																																																																																																																																																																																																																																																																																			1
ATACAC	6	1																																																																																																																																																																																																																																																																																																																																		7
ATACAT	3																																																																																																																																																																																																																																																																																																																																			3
ATACGA	1																																																																																																																																																																																																																																																																																																																																			1
ATACTA	1																																																																																																																																																																																																																																																																																																																																			1
ATAGTG	1																																																																																																																																																																																																																																																																																																																																			1
ATATAC	2																																																																																																																																																																																																																																																																																																																																			2
ATCACT	1																																																																																																																																																																																																																																																																																																																																			1
ATCGCC	1																																																																																																																																																																																																																																																																																																																																			1
ATCGTC	2																																																																																																																																																																																																																																																																																																																																			2
ATCTAT		1																																																																																																																																																																																																																																																																																																																																		1
ATGAAG	1																																																																																																																																																																																																																																																																																																																																			1
ATGACG	1																																																																																																																																																																																																																																																																																																																																			1
ATGAGT	1																																																																																																																																																																																																																																																																																																																																			1
ATGTAT	2																																																																																																																																																																																																																																																																																																																																			2
ATGTGT	5																																																																																																																																																																																																																																																																																																																																			5
ATTACT	5																																																																																																																																																																																																																																																																																																																																			5
ATTCGT	1																																																																																																																																																																																																																																																																																																																																			1
ATTGTT	4																																																																																																																																																																																																																																																																																																																																			4
CAACAG	8	1																																																																																																																																																																																																																																																																																																																																		9
CAACAT	1																																																																																																																																																																																																																																																																																																																																			1
CAACCA	1																																																																																																																																																																																																																																																																																																																																			1
CAACGA	1																																																																																																																																																																																																																																																																																																																																			1
CAATAA	1																																																																																																																																																																																																																																																																																																																																			1
CACAAC	1																																																																																																																																																																																																																																																																																																																																			1
CACACG	1																																																																																																																																																																																																																																																																																																																																			1
CACACT	1																																																																																																																																																																																																																																																																																																																																			1
CACATA	4																																																																																																																																																																																																																																																																																																																																			4
CACATG		1																																																																																																																																																																																																																																																																																																																																		1
CACATT	2																																																																																																																																																																																																																																																																																																																																			2
CACCCC	1																																																																																																																																																																																																																																																																																																																																			1
CACCTC	2																																																																																																																																																																																																																																																																																																																																			2
CACTAC		1																																																																																																																																																																																																																																																																																																																																		1
CACTAT	1																																																																																																																																																																																																																																																																																																																																			1
CACTCA	1																																																																																																																																																																																																																																																																																																																																			1
CACTCC	1																																																																																																																																																																																																																																																																																																																																			1
CAGCAA	2	1																																																																																																																																																																																																																																																																																																																																		3
CAGCCA	1																																																																																																																																																																																																																																																																																																																																			1
CAGTAG	1																																																																																																																																																																																																																																																																																																																																			1
CATACA	4																																																																																																																																																																																																																																																																																																																																			4
CATATA	3																																																																																																																																																																																																																																																																																																																																			3
CATCAC	1																																																																																																																																																																																																																																																																																																																																			1
CATCCT	2	1																																																																																																																																																																																																																																																																																																																																		3
CATGCC	1																																																																																																																																																																																																																																																																																																																																			1
CATTAC	1																																																																																																																																																																																																																																																																																																																																			1
CCAAAC			1						1																																																																																																																																																																																																																																																																																																																											2
CCAACA	1																																																																																																																																																																																																																																																																																																																																			1
CCACAG	1																																																																																																																																																																																																																																																																																																																																			1
CCACCG	2	1																																																																																																																																																																																																																																																																																																																																		3
CCACTA	1																																																																																																																																																																																																																																																																																																																																			1
CCCCCA	1																																																																																																																																																																																																																																																																																																																																			1
CCCCGC	2																																																																																																																																																																																																																																																																																																																																			2
CCCCTC	1																																																																																																																																																																																																																																																																																																																																			1
CCCGAA			1																																																																																																																																																																																																																																																																																																																																	1
CCCTAA	1	1																																																																																																																																																																																																																																																																																																																																		2
CCGCGA	1																																																																																																																																																																																																																																																																																																																																			1
CCTAAC					2																																																																																																																																																																																																																																																																																																																															2
CCTATA	1																																																																																																																																																																																																																																																																																																																																			1
CCTCGT	1																																																																																																																																																																																																																																																																																																																																			1
CCTCTT	2		1																																																																																																																																																																																																																																																																																																																																	3
CCTTCT	1																																																																																																																																																																																																																																																																																																																																			1
CGAACA	1																																																																																																																																																																																																																																																																																																																																			1
CGAAGA	1																																																																																																																																																																																																																																																																																																																																			1
CGACAC	1																																																																																																																																																																																																																																																																																																																																			1
CGACCA	1																																																																																																																																																																																																																																																																																																																																			1
CGAGGA	2																																																																																																																																																																																																																																																																																																																																			2
CGATGA	2																																																																																																																																																																																																																																																																																																																																			2
CGCACC	1																																																																																																																																																																																																																																																																																																																																			1
CGCCAC	1																																																																																																																																																																																																																																																																																																																																			1
CGCCGT	1																																																																																																																																																																																																																																																																																																																																			1
CGGCCT	1																																																																																																																																																																																																																																																																																																																																			1
CGGCGT	1																																																																																																																																																																																																																																																																																																																																			1
CGTCAA	1																																																																																																																																																																																																																																																																																																																																			1
CGTGTG	1	1																																																																																																																																																																																																																																																																																																																																		2
CGTTGT	1																																																																																																																																																																																																																																																																																																																																			1
CTAATG	1																																																																																																																																																																																																																																																																																																																																			1
CTACAA	1																																																																																																																																																																																																																																																																																																																																			1
CTACGA	3																																																																																																																																																																																																																																																																																																																																			3
CTACTC	1																																																																																																																																																																																																																																																																																																																																			1
CTACTG	1																																																																																																																																																																																																																																																																																																																																			1
CTATTA	1																																																																																																																																																																																																																																																																																																																																			1
CTCATC	1																																																																																																																																																																																																																																																																																																																																			1
CTCGGC	1																																																																																																																																																																																																																																																																																																																																			1
CTCGTC	1																																																																																																																																																																																																																																																																																																																																			1
CTCTCA	1																																																																																																																																																																																																																																																																																																																																			1
CTCTCG	1																																																																																																																																																																																																																																																																																																																																			1
CTCTTC	5																																																																																																																																																																																																																																																																																																																																			5
CTGAGG	1																																																																																																																																																																																																																																																																																																																																			1
CTGTTG	5																																																																																																																																																																																																																																																																																																																																			5
CTTACC	1																																																																																																																																																																																																																																																																																																																																			1
CTTCAC	1																																																																																																																																																																																																																																																																																																																																			1
CTTCAT	1																																																																																																																																																																																																																																																																																																																																			1
CTTCCT	1																																																																																																																																																																																																																																																																																																																																			1
CTTTCT	2																																																																																																																																																																																																																																																																																																																																			2
GAAAGA	1																																																																																																																																																																																																																																																																																																																																			1
GAAGAC	2																																																																																																																																																																																																																																																																																																																																			2
GAAGAG	5	1																																																																																																																																																																																																																																																																																																																																		6
GAAGGA	1																																																																																																																																																																																																																																																																																																																																			1
GAAGTA	1																																																																																																																																																																																																																																																																																																																																			1
GAATAA	1																																																																																																																																																																																																																																																																																																																																			1
GACACA	1																																																																																																																																																																																																																																																																																																																																			1
GACGAG	1	1																																																																																																																																																																																																																																																																																																																																		2
GACGAT	2																																																																																																																																																																																																																																																																																																																																			2
GAGAAT	1																																																																																																																																																																																																																																																																																																																																			1
GAGAGT	2																																																																																																																																																																																																																																																																																																																																			2
GAGGAA	2																																																																																																																																																																																																																																																																																																																																			2
GATAGT	1																																																																																																																																																																																																																																																																																																																																			1
GATGAA	1																																																																																																																																																																																																																																																																																																																																			1
GATGAC	2																																																																																																																																																																																																																																																																																																																																			2
GATGAG	1																																																																																																																																																																																																																																																																																																																																			1
GCAACA	1																																																																																																																																																																																																																																																																																																																																			1
GCACAC	1																																																																																																																																																																																																																																																																																																																																			1
GCAGCC	1																																																																																																																																																																																																																																																																																																																																			1
GCAGCG	2																																																																																																																																																																																																																																																																																																																																			2
GCAGTA	1																																																																																																																																																																																																																																																																																																																																			1
GCATCA	1																																																																																																																																																																																																																																																																																																																																			1
GCCGCA	1																																																																																																																																																																																																																																																																																																																																			1
GCGGAG	1																																																																																																																																																																																																																																																																																																																																			1
GCGGCT	1																																																																																																																																																																																																																																																																																																																																			1
GCGGGG	1																																																																																																																																																																																																																																																																																																																																			1
GCGGTC	2																																																																																																																																																																																																																																																																																																																																			2
GCTGCC	1																																																																																																																																																																																																																																																																																																																																			1
GCTGCG	1																																																																																																																																																																																																																																																																																																																																			1
GCTGTG	1																																																																																																																																																																																																																																																																																																																																			1
GCTGTT	2																																																																																																																																																																																																																																																																																																																																			2
GGCAGC	1																																																																																																																																																																																																																																																																																																																																			1
GGCGGG	1																																																																																																																																																																																																																																																																																																																																			1
GGGTGT	1																																																																																																																																																																																																																																																																																																																																			1
GGGTTA	1		1				1		1	1																																																																																																																																																																																																																																																																																																																										5
GGGTTC			1																																																																																																																																																																																																																																																																																																																																	1
GGGTTT		1						1		1																																																																																																																																																																																																																																																																																																																										3
GGTAGT	1																																																																																																																																																																																																																																																																																																																																			1
GGTGAG	1																																																																																																																																																																																																																																																																																																																																			1
GGTGCG	1																																																																																																																																																																																																																																																																																																																																			1
GGTTAG		1																																																																																																																																																																																																																																																																																																																																		1
GTAGTG	2																																																																																																																																																																																																																																																																																																																																			2
GTAGTT	1																																																																																																																																																																																																																																																																																																																																			1
GTATAT	1																																																																																																																																																																																																																																																																																																																																			1
GTATGT	3																																																																																																																																																																																																																																																																																																																																			3
GTCATC	1																																																																																																																																																																																																																																																																																																																																			1
GTCCCA	1	1																																																																																																																																																																																																																																																																																																																																		2
GTCCTC	1																																																																																																																																																																																																																																																																																																																																			1
GTCGCC	1																																																																																																																																																																																																																																																																																																																																			1
GTGAGG	1	1																																																																																																																																																																																																																																																																																																																																		2
GTGATG	2																																																																																																																																																																																																																																																																																																																																			2
GTGCCT	1																																																																																																																																																																																																																																																																																																																																			1
GTGCTG	1																																																																																																																																																																																																																																																																																																																																			1
GTGGCG	1																																																																																																																																																																																																																																																																																																																																			1
GTGGTA	3																																																																																																																																																																																																																																																																																																																																			3
GTGTAT	6	1																																																																																																																																																																																																																																																																																																																																		7
GTGTGA		1																																																																																																																																																																																																																																																																																																																																		1
GTGTGG	2																																																																																																																																																																																																																																																																																																																																			2
GTGTTG	1																																																																																																																																																																																																																																																																																																																																			1
GTTAGG			1																																																																																																																																																																																																																																																																																																																																	1
GTTGCT	2																																																																																																																																																																																																																																																																																																																																			2
GTTGTG	1																																																																																																																																																																																																																																																																																																																																			1
GTTTGG	1																																																																																																																																																																																																																																																																																																																																			1
TAACAA	2																																																																																																																																																																																																																																																																																																																																			2
TAATAG	1																																																																																																																																																																																																																																																																																																																																			1
TAATGA	1																																																																																																																																																																																																																																																																																																																																			1
TAATGG	1																																																																																																																																																																																																																																																																																																																																			1
TACACA	5		1																																																																																																																																																																																																																																																																																																																																	6
TACATA	3	1																																																																																																																																																																																																																																																																																																																																		4
TACTAG	2																																																																																																																																																																																																																																																																																																																																			2
TACTAT	1																																																																																																																																																																																																																																																																																																																																			1
TAGCAG	1																																																																																																																																																																																																																																																																																																																																			1
TAGTAA	2																																																																																																																																																																																																																																																																																																																																			2
TAGTCA		1																																																																																																																																																																																																																																																																																																																																		1
TAGTCG	1																																																																																																																																																																																																																																																																																																																																			1
TAGTGA	1																																																																																																																																																																																																																																																																																																																																			1
TAGTGT	1																																																																																																																																																																																																																																																																																																																																			1
TAGTTA	1																																																																																																																																																																																																																																																																																																																																			1
TATAAA		1																																																																																																																																																																																																																																																																																																																																		1
TATACA	2	1																																																																																																																																																																																																																																																																																																																																		3
TATATC	1	1		1																																																																																																																																																																																																																																																																																																																																3
TATATG	5	1	1																																																																																																																																																																																																																																																																																																																																	7
TATATT	1																																																																																																																																																																																																																																																																																																																																			1
TATCTT	1																																																																																																																																																																																																																																																																																																																																			1
TATGTA	5		1																																																																																																																																																																																																																																																																																																																																	6
TATGTG	3	1	1																																																																																																																																																																																																																																																																																																																																	5
TATTAC	2																																																																																																																																																																																																																																																																																																																																			2
TCACTA	1																																																																																																																																																																																																																																																																																																																																			1
TCACTC		1																																																																																																																																																																																																																																																																																																																																		1
TCATCG	3																																																																																																																																																																																																																																																																																																																																			3
TCATCT	1																																																																																																																																																																																																																																																																																																																																			1
TCATTA	2																																																																																																																																																																																																																																																																																																																																			2
TCCTCG	1	1																																																																																																																																																																																																																																																																																																																																		2
TCCTCT	3																																																																																																																																																																																																																																																																																																																																			3
TCCTTA	2																																																																																																																																																																																																																																																																																																																																			2
TCGACC	1																																																																																																																																																																																																																																																																																																																																			1
TCGCAC	1																																																																																																																																																																																																																																																																																																																																			1
TCGTAG	1																																																																																																																																																																																																																																																																																																																																			1
TCGTCC	1																																																																																																																																																																																																																																																																																																																																			1
TCGTCT	2																																																																																																																																																																																																																																																																																																																																			2
TCTATA			1																																																																																																																																																																																																																																																																																																																																	1
TCTCCC	2																																																																																																																																																																																																																																																																																																																																			2
TCTCCG	1																																																																																																																																																																																																																																																																																																																																			1
TCTCTT	3																																																																																																																																																																																																																																																																																																																																			3
TCTGTG	1																																																																																																																																																																																																																																																																																																																																			1
TCTTCA	2																																																																																																																																																																																																																																																																																																																																			2
TCTTCC	3		1																																																																																																																																																																																																																																																																																																																																	4
TCTTTC	1																																																																																																																																																																																																																																																																																																																																			1
TGAGGC	1																																																																																																																																																																																																																																																																																																																																			1
TGATAG	1																																																																																																																																																																																																																																																																																																																																			1
TGATGG	2																																																																																																																																																																																																																																																																																																																																			2
TGCAGC	1																																																																																																																																																																																																																																																																																																																																			1
TGCGGC	1																																																																																																																																																																																																																																																																																																																																			1
TGCGTG	1																																																																																																																																																																																																																																																																																																																																			1
TGCTAA	1																																																																																																																																																																																																																																																																																																																																			1
TGCTGT	7																																																																																																																																																																																																																																																																																																																																			7
TGGGTT		2					1	1																																																																																																																																																																																																																																																																																																																												4
TGGTAG	2																																																																																																																																																																																																																																																																																																																																			2
TGTATA	1																																																																																																																																																																																																																																																																																																																																			1
TGTATG	11	1																																																																																																																																																																																																																																																																																																																																		12
TGTCTG	1																																																																																																																																																																																																																																																																																																																																			1
TGTGAG		1																																																																																																																																																																																																																																																																																																																																		1
TGTGCG	2																																																																																																																																																																																																																																																																																																																																			2
TGTGGG	1																																																																																																																																																																																																																																																																																																																																			1
TGTGGT	1																																																																																																																																																																																																																																																																																																																																			1
TGTGTA	10																																																																																																																																																																																																																																																																																																																																			10
TGTGTC	1																																																																																																																																																																																																																																																																																																																																			1
TGTGTT	3																																																																																																																																																																																																																																																																																																																																			3
TGTTAG	1																																																																																																																																																																																																																																																																																																																																			1
TGTTAT	1																																																																																																																																																																																																																																																																																																																																			1
TGTTGC	6																																																																																																																																																																																																																																																																																																																																			6
TGTTGG	1																																																																																																																																																																																																																																																																																																																																			1
TGTTTT	1																																																																																																																																																																																																																																																																																																																																			1
TTACTA	3																																																																																																																																																																																																																																																																																																																																			3
TTATAA	1																																																																																																																																																																																																																																																																																																																																			1
TTATTG	1																																																																																																																																																																																																																																																																																																																																			1
TTCACT	1																																																																																																																																																																																																																																																																																																																																			1
TTCTCT	2																																																																																																																																																																																																																																																																																																																																			2
TTCTTT	1																																																																																																																																																																																																																																																																																																																																			1
TTGCCT	1																																																																																																																																																																																																																																																																																																																																			1
TTGCTG	2																																																																																																																																																																																																																																																																																																																																			2
TTGTAG	2																																																																																																																																																																																																																																																																																																																																			2
TTGTGT	1																																																																																																																																																																																																																																																																																																																																			1
TTGTTA	4																																																																																																																																																																																																																																																																																																																																			4
TTTCCC	1																																																																																																																																																																																																																																																																																																																																			1
TTTCTT	1																																																																																																																																																																																																																																																																																																																																			1
TTTTTC	1																																																																																																																																																																																																																																																																																																																																			1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	229	230	231	232	233	234	235	236	237	238	239	240	241	242	243	244	245	246	247	248	249	250	251	252	253	254	255	256	257	258	259	260	261	262	263	264	265	266	267	268	269	270	271	272	273	274	275	276	277	278	279	280	281	282	283	284	285	286	287	288	289	290	291	292	293	294	295	296	297	298	299	300	301	302	303	304	305	306	307	308	309	310	311	312	313	314	315	316	317	318	319	320	321	322	323	324	325	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-												1								1									1																																																																																																																																																																																																																																																																																						3
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1		2							1			1																																																				1															1										1																																																																																																																																																																																																																								8
AC/GT	-	-	-	2267	1422	914	666	431	245	206	137	100	78	59	50	32	29	25	22	15	12	5	5	5	6	1	2	3	1	1	4	1		1	2	5	2																																																																																																																																																																	1																																																				1	1							1																													1											1																									1	6761
AG/CT	-	-	-	689	374	228	119	61	43	20	14	3	6	6	5	3	3	3		1	1	3	1			2				1																																																																																																																																																																																																																																																																																																						1586
AT/AT	-	-	-	684	400	292	276	203	162	127	102	85	50	52	37	30	27	17	17	10	15	7	5	2	5	2	5			2				1																																																																																																																																																																																																																																																																																																		2615
CG/CG	-	-	-	5	1																																																																																																																																																																																																																																																																																																																															6
AAC/GTT	-	-	570	211	75	23	6	1																																																																																																																																																																																																																																																																																																																												886
AAG/CTT	-	-	183	45	13	4		1																																																																																																																																																																																																																																																																																																																												246
AAT/ATT	-	-	32	13	3	3									1																																																																																																																																																																																																																																																																																																																					52
ACC/GGT	-	-	150	47	9	2	1	1																																																																																																																																																																																																																																																																																																																												210
ACG/CGT	-	-	130	41	10	1	1																																																																																																																																																																																																																																																																																																																													183
ACT/AGT	-	-	704	303	124	52	21	6	4	1	1					1																																																																																																																																																																																																																																																																																																																				1217
AGC/CTG	-	-	269	63	17	3						1																																																																																																																																																																																																																																																																																																																								353
AGG/CCT	-	-	52	9	1		1																																																																																																																																																																																																																																																																																																																													63
ATC/ATG	-	-	115	37	7	2	1																																																																																																																																																																																																																																																																																																																													162
CCG/CGG	-	-	73	19	7	5		1																																																																																																																																																																																																																																																																																																																												105
AAAC/GTTT	-	11	2																																																																																																																																																																																																																																																																																																																																	13
AAAG/CTTT	-	25	3																																																																																																																																																																																																																																																																																																																																	28
AAAT/ATTT	-	16	6		2	1																																																																																																																																																																																																																																																																																																																														25
AAGC/CTTG	-	3																																																																																																																																																																																																																																																																																																																																		3
AAGT/ACTT	-	3	1																																																																																																																																																																																																																																																																																																																																	4
AATC/ATTG	-	1																																																																																																																																																																																																																																																																																																																																		1
ACAG/CTGT	-	1	1	1																																																																																																																																																																																																																																																																																																																																3
ACAT/ATGT	-	143	24	6	1																																																																																																																																																																																																																																																																																																																															174
ACCT/AGGT	-	2																																																																																																																																																																																																																																																																																																																																		2
ACGC/CGTG	-	2																																																																																																																																																																																																																																																																																																																																		2
ACGT/ACGT	-	2																																																																																																																																																																																																																																																																																																																																		2
ACTC/AGTG	-	10	3	1																																																																																																																																																																																																																																																																																																																																14
AGAT/ATCT	-	14	6	7	1		1																																																																																																																																																																																																																																																																																																																													29
AGGG/CCCT	-	6																																																																																																																																																																																																																																																																																																																																		6
ATGC/ATGC	-	1																																																																																																																																																																																																																																																																																																																																		1
AAAAC/GTTTT	3																																																																																																																																																																																																																																																																																																																																			3
AAAAG/CTTTT	22	2																																																																																																																																																																																																																																																																																																																																		24
AAAAT/ATTTT	3																																																																																																																																																																																																																																																																																																																																			3
AAACC/GGTTT	1																																																																																																																																																																																																																																																																																																																																			1
AAACT/AGTTT	3																																																																																																																																																																																																																																																																																																																																			3
AAAGC/CTTTG	5																																																																																																																																																																																																																																																																																																																																			5
AAAGG/CCTTT	6	4																																																																																																																																																																																																																																																																																																																																		10
AAAGT/ACTTT	5																																																																																																																																																																																																																																																																																																																																			5
AACAC/GTGTT	7	1																																																																																																																																																																																																																																																																																																																																		8
AACAG/CTGTT	1																																																																																																																																																																																																																																																																																																																																			1
AACAT/ATGTT	1																																																																																																																																																																																																																																																																																																																																			1
AACGT/ACGTT	1																																																																																																																																																																																																																																																																																																																																			1
AAGAC/CTTGT	1																																																																																																																																																																																																																																																																																																																																			1
AAGAG/CTCTT	8	1																																																																																																																																																																																																																																																																																																																																		9
AAGAT/ATCTT	2																																																																																																																																																																																																																																																																																																																																			2
AAGGG/CCCTT	3																																																																																																																																																																																																																																																																																																																																			3
AAGGT/ACCTT	2																																																																																																																																																																																																																																																																																																																																			2
AAGTG/ACTTC	1																																																																																																																																																																																																																																																																																																																																			1
AATAG/ATTCT	1																																																																																																																																																																																																																																																																																																																																			1
AATAT/ATATT	1																																																																																																																																																																																																																																																																																																																																			1
AATCT/AGATT	1																																																																																																																																																																																																																																																																																																																																			1
AATGC/ATTGC	4																																																																																																																																																																																																																																																																																																																																			4
AATGT/ACATT	2																																																																																																																																																																																																																																																																																																																																			2
ACACC/GGTGT	3	1																																																																																																																																																																																																																																																																																																																																		4
ACACG/CGTGT	1																																																																																																																																																																																																																																																																																																																																			1
ACACT/AGTGT	4																																																																																																																																																																																																																																																																																																																																			4
ACAGC/CTGTG	1																																																																																																																																																																																																																																																																																																																																			1
ACAGG/CCTGT	1																																																																																																																																																																																																																																																																																																																																			1
ACAGT/ACTGT	2																																																																																																																																																																																																																																																																																																																																			2
ACCCC/GGGGT	3	1																																																																																																																																																																																																																																																																																																																																		4
ACCCT/AGGGT	1																																																																																																																																																																																																																																																																																																																																			1
ACCGC/CGGTG	4																																																																																																																																																																																																																																																																																																																																			4
ACCTC/AGGTG		1																																																																																																																																																																																																																																																																																																																																		1
ACGCC/CGTGG	2																																																																																																																																																																																																																																																																																																																																			2
ACGCG/CGCGT	1																																																																																																																																																																																																																																																																																																																																			1
ACGCT/AGCGT	1																																																																																																																																																																																																																																																																																																																																			1
ACGGC/CCGTG	1																																																																																																																																																																																																																																																																																																																																			1
ACTAG/AGTCT	1																																																																																																																																																																																																																																																																																																																																			1
ACTCC/AGTGG	1																																																																																																																																																																																																																																																																																																																																			1
ACTCG/AGTCG	4																																																																																																																																																																																																																																																																																																																																			4
ACTGC/AGTGC	1																																																																																																																																																																																																																																																																																																																																			1
AGAGC/CTCTG	1																																																																																																																																																																																																																																																																																																																																			1
AGAGG/CCTCT	9																																																																																																																																																																																																																																																																																																																																			9
AGCCC/CTGGG	1																																																																																																																																																																																																																																																																																																																																			1
AGCCG/CGGCT	2																																																																																																																																																																																																																																																																																																																																			2
AGCGC/CGCTG	5																																																																																																																																																																																																																																																																																																																																			5
AGGCG/CCTCG	1																																																																																																																																																																																																																																																																																																																																			1
AGGGC/CCCTG	4																																																																																																																																																																																																																																																																																																																																			4
AGGGG/CCCCT	8																																																																																																																																																																																																																																																																																																																																			8
ATGCC/ATGGC	2																																																																																																																																																																																																																																																																																																																																			2
CCCCG/CGGGG	18	1																																																																																																																																																																																																																																																																																																																																		19
CCCGG/CCGGG	3																																																																																																																																																																																																																																																																																																																																			3
CCGCG/CGCGG	3																																																																																																																																																																																																																																																																																																																																			3
AAAAAC/GTTTTT	1																																																																																																																																																																																																																																																																																																																																			1
AAAAAG/CTTTTT	3																																																																																																																																																																																																																																																																																																																																			3
AAACAC/GTGTTT	7	1																																																																																																																																																																																																																																																																																																																																		8
AAACCC/GGGTTT	3	3	1	2		1	1	5	2	1																																																																																																																																																																																																																																																																																																																										19
AAAGAG/CTCTTT	22		1																																																																																																																																																																																																																																																																																																																																	23
AAAGAT/ATCTTT	1																																																																																																																																																																																																																																																																																																																																			1
AAAGGC/CCTTTG	2																																																																																																																																																																																																																																																																																																																																			2
AAAGGG/CCCTTT	1																																																																																																																																																																																																																																																																																																																																			1
AAAGTG/ACTTTC	1																																																																																																																																																																																																																																																																																																																																			1
AAATAT/ATATTT	1	1																																																																																																																																																																																																																																																																																																																																		2
AACAAT/ATTGTT	18																																																																																																																																																																																																																																																																																																																																			18
AACACC/GGTGTT	4																																																																																																																																																																																																																																																																																																																																			4
AACACG/CGTGTT	1																																																																																																																																																																																																																																																																																																																																			1
AACACT/AGTGTT	11																																																																																																																																																																																																																																																																																																																																			11
AACAGC/CTGTTG	41	2																																																																																																																																																																																																																																																																																																																																		43
AACAGT/ACTGTT	1																																																																																																																																																																																																																																																																																																																																			1
AACATC/ATGTTG	1																																																																																																																																																																																																																																																																																																																																			1
AACCAC/GGTTGT	4																																																																																																																																																																																																																																																																																																																																			4
AACCCG/CGGGTT			2																																																																																																																																																																																																																																																																																																																																	2
AACCCT/AGGGTT	2	2	4	1	2	1	2	1	1	1																																																																																																																																																																																																																																																																																																																										17
AACCGC/CGGTTG	1																																																																																																																																																																																																																																																																																																																																			1
AACGAC/CGTTGT	4																																																																																																																																																																																																																																																																																																																																			4
AACGTC/ACGTTG	1																																																																																																																																																																																																																																																																																																																																			1
AACTAC/AGTTGT	5																																																																																																																																																																																																																																																																																																																																			5
AACTAT/AGTTAT	1																																																																																																																																																																																																																																																																																																																																			1
AAGAAT/ATTCTT	2																																																																																																																																																																																																																																																																																																																																			2
AAGACG/CGTCTT	5																																																																																																																																																																																																																																																																																																																																			5
AAGAGG/CCTCTT	23	1	2																																																																																																																																																																																																																																																																																																																																	26
AAGAGT/ACTCTT	1																																																																																																																																																																																																																																																																																																																																			1
AAGATG/ATCTTC	6																																																																																																																																																																																																																																																																																																																																			6
AAGGAG/CCTTCT	4																																																																																																																																																																																																																																																																																																																																			4
AAGGAT/ATCCTT	2																																																																																																																																																																																																																																																																																																																																			2
AAGGGT/ACCCTT	1																																																																																																																																																																																																																																																																																																																																			1
AAGGTG/ACCTTC	2																																																																																																																																																																																																																																																																																																																																			2
AAGTAG/ACTTCT	3																																																																																																																																																																																																																																																																																																																																			3
AAGTCC/ACTTGG	1																																																																																																																																																																																																																																																																																																																																			1
AATACG/ATTCGT	2																																																																																																																																																																																																																																																																																																																																			2
AATACT/AGTATT	2																																																																																																																																																																																																																																																																																																																																			2
AATAGT/ACTATT	21																																																																																																																																																																																																																																																																																																																																			21
AATGAG/ATTCTC	1																																																																																																																																																																																																																																																																																																																																			1
AATGAT/ATCATT	3																																																																																																																																																																																																																																																																																																																																			3
AATGCT/AGCATT	2																																																																																																																																																																																																																																																																																																																																			2
AATGGT/ACCATT	2																																																																																																																																																																																																																																																																																																																																			2
AATGTG/ACATTC	2																																																																																																																																																																																																																																																																																																																																			2
AATTAT/AATTAT	1																																																																																																																																																																																																																																																																																																																																			1
ACACAG/CTGTGT	5																																																																																																																																																																																																																																																																																																																																			5
ACACAT/ATGTGT	72	5	2																																																																																																																																																																																																																																																																																																																																	79
ACACCC/GGGTGT	5																																																																																																																																																																																																																																																																																																																																			5
ACACCG/CGGTGT	1																																																																																																																																																																																																																																																																																																																																			1
ACACGC/CGTGTG	6	1																																																																																																																																																																																																																																																																																																																																		7
ACACTC/AGTGTG	2	2																																																																																																																																																																																																																																																																																																																																		4
ACAGCC/CTGTGG	3																																																																																																																																																																																																																																																																																																																																			3
ACAGGC/CCTGTG	1																																																																																																																																																																																																																																																																																																																																			1
ACATAT/ATATGT	29	3	2																																																																																																																																																																																																																																																																																																																																	34
ACATGC/ATGTGC		1																																																																																																																																																																																																																																																																																																																																		1
ACCACG/CGTGGT	1																																																																																																																																																																																																																																																																																																																																			1
ACCACT/AGTGGT	11	3																																																																																																																																																																																																																																																																																																																																		14
ACCAGC/CTGGTG	1																																																																																																																																																																																																																																																																																																																																			1
ACCATC/ATGGTG	5																																																																																																																																																																																																																																																																																																																																			5
ACCCCC/GGGGGT	2																																																																																																																																																																																																																																																																																																																																			2
ACCCGC/CGGGTG	2																																																																																																																																																																																																																																																																																																																																			2
ACCCTC/AGGGTG	2	1																																																																																																																																																																																																																																																																																																																																		3
ACCGCC/CGGTGG	4	1																																																																																																																																																																																																																																																																																																																																		5
ACCGCG/CGCGGT	3																																																																																																																																																																																																																																																																																																																																			3
ACCTAT/AGGTAT	1																																																																																																																																																																																																																																																																																																																																			1
ACCTCC/AGGTGG	2																																																																																																																																																																																																																																																																																																																																			2
ACCTCG/AGGTCG	1																																																																																																																																																																																																																																																																																																																																			1
ACGACT/AGTCGT	5																																																																																																																																																																																																																																																																																																																																			5
ACGAGG/CCTCGT	8	2																																																																																																																																																																																																																																																																																																																																		10
ACGATG/ATCGTC	14																																																																																																																																																																																																																																																																																																																																			14
ACGCCG/CGGCGT	1																																																																																																																																																																																																																																																																																																																																			1
ACGGAG/CCGTCT	1																																																																																																																																																																																																																																																																																																																																			1
ACGGCG/CCGTCG	2																																																																																																																																																																																																																																																																																																																																			2
ACGGCT/AGCCGT	3																																																																																																																																																																																																																																																																																																																																			3
ACTAGC/AGTGCT	1																																																																																																																																																																																																																																																																																																																																			1
ACTAGT/ACTAGT	3																																																																																																																																																																																																																																																																																																																																			3
ACTATC/AGTGAT	9																																																																																																																																																																																																																																																																																																																																			9
ACTATG/AGTCAT		1																																																																																																																																																																																																																																																																																																																																		1
ACTCAG/AGTCTG	1																																																																																																																																																																																																																																																																																																																																			1
ACTCAT/AGTATG	1																																																																																																																																																																																																																																																																																																																																			1
ACTCCC/AGTGGG	2																																																																																																																																																																																																																																																																																																																																			2
ACTCCT/AGGAGT	1																																																																																																																																																																																																																																																																																																																																			1
ACTCGC/AGTGCG	1																																																																																																																																																																																																																																																																																																																																			1
ACTCTC/AGAGTG	4	1																																																																																																																																																																																																																																																																																																																																		5
ACTGCT/AGCAGT	4																																																																																																																																																																																																																																																																																																																																			4
ACTGGG/AGTCCC	1	1																																																																																																																																																																																																																																																																																																																																		2
AGAGCG/CGCTCT	2																																																																																																																																																																																																																																																																																																																																			2
AGAGGG/CCCTCT	3																																																																																																																																																																																																																																																																																																																																			3
AGATAT/ATATCT	1	2	1	1																																																																																																																																																																																																																																																																																																																																5
AGCATC/ATGCTG	1																																																																																																																																																																																																																																																																																																																																			1
AGCCGC/CGGCTG	5																																																																																																																																																																																																																																																																																																																																			5
AGCCTC/AGGCTG	2																																																																																																																																																																																																																																																																																																																																			2
AGCGGC/CCGCTG	4																																																																																																																																																																																																																																																																																																																																			4
AGCTGC/AGCTGC	1																																																																																																																																																																																																																																																																																																																																			1
AGGATG/ATCCTC	4	1																																																																																																																																																																																																																																																																																																																																		5
AGGCCG/CCTCGG	2																																																																																																																																																																																																																																																																																																																																			2
AGGCGG/CCGCCT	1																																																																																																																																																																																																																																																																																																																																			1
AGGGGG/CCCCCT	1																																																																																																																																																																																																																																																																																																																																			1
ATCGCC/ATGGCG	1																																																																																																																																																																																																																																																																																																																																			1
ATGCCC/ATGGGC	1																																																																																																																																																																																																																																																																																																																																			1
CCCCCG/CGGGGG	4																																																																																																																																																																																																																																																																																																																																			4
