Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_047372815.1/fasta/hub_GCA_047372815.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              20
Total size of examined sequences (bp):           67114787
Total number of identified SSRs:                 20760
Number of SSR containing sequences:              19
Number of sequences containing more than 1 SSR:  17
Number of SSRs present in compound formation:    2173


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	812
2	1070
3	9764
4	3628
5	3714
6	1772

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	229	230	231	232	233	234	235	236	237	238	239	240	241	242	243	244	245	246	247	248	249	250	251	252	253	254	255	256	257	258	259	260	261	262	263	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1				1	3		1	1			1					3		1		1																								1																						1																																																																																																																																																																																	16
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	61	56	49	60	41	26	23	19	19	12	4	3	2	2	1	1	2																																																																																																																																																																																																																																				381
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	75	69	57	40	42	21	24	25	16	6	5	4	3	3	2	1	1	1			1							1							1			1																															1																																																																																																																																																																																400
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1			3	1	1						2				1	2	1							1									1				1																																																																																																																																																																																																														15
AC	-	-	-	47	23	25	7	3	2	1		1	3		1	1		1						1																																																																																																																																																																																																																																														116
AG	-	-	-	45	14	7	3				2							1																																																																																																																																																																																																																																																				72
AT	-	-	-			2				1																																																																																																																																																																																																																																																												3
CA	-	-	-	108	55	39	35	11	10	2	6	1	1		1								1																																																																																																																																																																																																																																															270
CG	-	-	-	13	2			1																																																																																																																																																																																																																																																														16
CT	-	-	-	35	17	12	3	5	3	2				1																																																																						1																																																																																																																																																																																		79
GA	-	-	-	26	8	6	3	4	2	1	1	1				1							1																																																																																																																																																																																																																																															54
GC	-	-	-	41	5																																																																																																																																																																																																																																																																	46
GT	-	-	-	82	41	33	20	8	7	5	3	2	3				1					1							1																																																																																																																																																																																																																																									207
TA	-	-	-	3		1																																																																																																																																																																																																																																																																4
TC	-	-	-	30	5	3	1	1	1	1							1																																																																																																																																																																																																																																																					43
TG	-	-	-	66	34	20	9	6	9	3	1	1		1	2		1					2		1						1	1													1																																																																																																																															1																																																																																											160
AAC	-	-	1		2																																																																																																																																																																																																																																																																	3
AAG	-	-	32	6	15	4			1																																																																																				1																																																																																																																																																																									59
AAT	-	-																																																																																																																																							1																																																							1																																																																						2
ACA	-	-	4					1																																																																																																																																																																																																																																																														5
ACC	-	-	6	1				1																																																																																																																																																																																																																																																														8
AGA	-	-	2	1	1	1																								1																														1																																					1																				1										1																																																																																																																																							10
AGC	-	-	254	136	69	44	32	12	12	7	1	3	3	1	1	1							1							1	1																																																																																																																																																																																																																																							579
AGG	-	-	29	14	9	1	2						1																																																																																																																																																																																																																																																									56
ATC	-	-	1																																																1																																																																																																																																																																																																																			2
ATG	-	-	5														1																																																																																																																																																																																																																																																					6
CAA	-	-	9	5	1	2																																																																																																																																																																																																																																																																17
CAC	-	-	19	11	1	2	3																																																																																																																																																																																																																																																															36
CAG	-	-	402	203	103	58	49	22	25	14	9	8	7	9	2	5	1	5	2			1		1	1				1																																																																																																																																																																																																																																									928
CAT	-	-	2																																																																																																																																																																																																																																																																			2
CCA	-	-	29	14	12	4		1	1																																																																																																																																																																																																																																																													61
CCG	-	-	205	59	29	17	1	1	1																																																																																																																																																																																																																																																													313
CCT	-	-	73	28	12	4	2						1																																																																																																																																																																																																																																																									120
CGC	-	-	309	112	35	13	3	1	1	1																																																																																																																																																																																																																																																												475
CGG	-	-	164	57	15	7	1	2			1	1																																																																																																																																																																																																																																																										248
CGT	-	-	1																																																																																																																																																																																																																																																																			1
CTC	-	-	44	20	10	4	2	1	1			1			1																																																																																																																																																																																																																																																							84
CTG	-	-	456	241	133	73	39	41	26	23	13	5	9	7	7	5	1	2	2	2	2								1			1					1	1																																																																																																																																																																																																																																1091
CTT	-	-	34	9	8		1								1																																																																																																															1																																																																																																																																								54
GAA	-	-	4	5	3																										1																																																																																																																																																																																1																																																							14
GAC	-	-	1																																																																																																																																																																																																																																																																			1
GAG	-	-	112	43	16	9	4	2	2	2	3		2																					1																																																																																																																																																																																																																																				196
GAT	-	-	4	1		1																				1																																																																																																																																																																																																																																												7
GCA	-	-	574	254	150	91	56	35	40	23	20	9	7	3		3	1	3	5	2	2	2									1	1																			1							1																																																																																																																																																																																																												1284
GCC	-	-	481	133	70	21	14	1	2		1														1																																																																																																																																																																																																																																													724
GCG	-	-	333	129	41	16	7	2	3	1	1																																																																																																																																																																																																																																																											533
GCT	-	-	509	241	123	89	50	39	20	18	18	12	6	4	4	1	4	1	1		1			2				1																																																																																																																																																																																																																																										1144
GGA	-	-	35	13	6	1	1																																																																																																																																																																																																																																																															56
GGC	-	-	512	174	66	28	4	2	2																																																																																																																																																																																																																																																													788
GGT	-	-	21	10	3	1	1	2	1	1																																																																																																																																																																																																																																																												40
GTC	-	-	2																																																																																																																																																																																																																																																																			2
GTG	-	-	18	13	3	3	1				1																																																																																																																																																																																																																																																											39
GTT	-	-	3	1	1		1																																																																																																																																																																																																																																																															6
TAA	-	-			1																																																																																																																																																																																																																																																																	1
TAG	-	-																								1																																																																																																																																																																																																																																												1
TCA	-	-	1	2																																																																																																																																																																																																																																																																		3
TCC	-	-	37	18	4	4	2	1		1																																																																																																																																																																																																																																																												67
TCT	-	-	7	5	1																									1																																																																																																																																																																																																																																								14
TGA	-	-	3																																																																																																																																																																																																																																																																			3
TGC	-	-	281	135	72	51	25	19	11	10	11	5	3	2	3	3	2	2	1																							1					1																																																																																																																																																																																																																							638
TGG	-	-	14	1	2				1																																																																																																																																																																																																																																																													18
TGT	-	-	7	4																																																																																																																																																																																																																																																																		11
TTC	-	-	3	5	1		1	1																																																																																																																																																																																																																																																														11
TTG	-	-	2		1																																																																																																																																																																																																																																																																	3
AAAC	-	1																																																																																																																																																																																																																																																																				1
AAAG	-	3	1																																																																																																						2													1																																																																																																																																																7
AAGA	-	3	3		1																														1																															1							1		1																			1																																																																																																																																																																								12
AAGC	-	1							1	1																1																						1																																																																																																																																																																																																																						5
AAGG	-	3																																																																																																													1												1																																																																																																																																											5
AAGT	-	1																																																																																																																																																																																																																																																																				1
AATC	-	3																																																																																																																																																																																																																																																																			1	4
AATG	-	1																																																																																																																																																																																																																																																																				1
ACAA	-																						1																																																																																																																																																																																																																																															1
ACCA	-	2																																																																																																																																																																																																																																																																				2
ACCC	-	7	2	2	1																																																																																																																																																																																																																																																																	12
ACCG	-	1																																																																																																																																																																																																																																																																				1
ACTG	-	1																																																																																																																																																																																																																																																																				1
AGAA	-	11	1	2				1	1					1																																														1	1	1			1																1							1			1									1																																																																																																																																																																		25
AGCA	-	4	5					1								1																	1																																																																																																																																																																																																																																					12
AGCC	-	9	3	2	1																																																																																																																																																																																																																																																																	15
AGGA	-	1					1																										1																																																																																																																																																																																																																																					3
AGGC	-	83	23	12	4	5	2	4	2			2	2			1	1		1					1																																																																																																																																																																																																																																														143
AGGG	-	24	4	2																																																																																																																																																																																																																																																																		30
AGGT	-	1																																																																																																																																																																																																																																																																				1
AGTC	-					1																																																																																																																																																																																																																																																																1
ATCA	-	1	1																																																																																																																																																																						1																																																																																													3
ATCC	-	1	1																																																																																																																																																																																																																																																																			2
ATGA	-	1																																																																																																																																																																																																																																																																				1
ATGC	-	8																																																																																																																																																																																																																																																																				8
ATTG	-	2	2	1	1																							1																						1																																																																																																																																																																																																																				8
CAAA	-	1																																																																																																																																																																																																																																																																				1
CAAG	-	7	1	2							1								1										1																																																																																																																																																																																																																																									13
CAAT	-	2	1												1																																																																																																																																																																																																																																																							4
CACC	-	20	10	4	2																																																																																																																																																																																																																																																																	36
CACG	-	1																1																																																																																																																																																																																																																																																				2
CACT	-																								1																																																																																																																																																																																																																																													1
CAGA	-	1	1																																																																																																																																																																																																																																																																			2
CAGC	-	224	64	38	8	3	1	4	2			2	1																																																																																																																																																																																																																																																									347
CAGG	-	63	36	9	10	4	5	2	3	2		1		2					1	1	1	2	1		1													1		1																																																																																																																																																																																																																														146
CAGT	-	3	1																																																																																																																																																																																																																																																																			4
CATC	-	2	1																																																																																																																																																																																																																																																																			3
CATG	-	4	1	2	1																																																																																																																																																																																																																																																																	8
CATT	-		1																																																																																																																																																																																																																																																																			1
CCAA	-	2												1																																																																																																																																																																																																																																																								3
CCAC	-	16	8	4																																																																																																																																																																																																																																																																		28
CCAG	-	10	5	1	1	1			1	1																																																																																																																																																																																																																																																												20
CCAT	-		1																																																																																																																																																																																																																																																																			1
CCCA	-	50	26	7	3																																																																																																																																																																																																																																																																	86
CCCG	-	8		2																																																																																																																																																																																																																																																																		10
CCCT	-	27	7	4	1		1	1																																																																																																																																																																																																																																																														41
CCGC	-	11	2	1		1																																																																																																																																																																																																																																																																15
CCTC	-	12	3	4	1							1																																																																																																																																																																																																																																																										21
CCTG	-	112	41	26	10	3	5	2	3	2	1	3	1				1													1																																																																																																																																																																																																																																								211
CCTT	-						1																																																																																																																																																	1																1																																																																																														3
CGCC	-	6	2				1		1																																																																																																																																																																																																																																																													10
CGCT	-		1																																																																																																																																																																																																																																																																			1
CGGC	-	7																																																																																																																																																																																																																																																																				7
CGGG	-	1	2																																																																																																																																																																																																																																																																			3
CGTC	-	1																																																																																																																																																																																																																																																																				1
CGTG	-	1																																																																																																																																																																																																																																																																				1
CTCA	-	1																																																																																																																																																																																																																																																																				1
CTCC	-	12	5							1																																																																																																																																																																																																																																																												18
CTGA	-	1																																																																																																																																																																																																																																																																				1
CTGC	-	102	39	16	8	5	7	4	3	3	2	2	2	2	2	2	1	1		1			1					1																																																																																																																																																																																																																																										204
CTGG	-	39	20	8	7	1		1	1	1		1																																																																																																																																																																																																																																																										79
CTTA	-	1																																																																																																																																																																																																																																																																				1
CTTC	-	1	1	1																																																																																																																																				1																																																																																																																														4
CTTG	-	3									1																															1																																																																																																																																																																																																																												5
CTTT	-	2			1																																																							1																																																																																																																																																																																																										4
GAAA	-	10	4														1													1																1												1									1											1								1	1																				1																										1																																																																																																																																	24
GAAG	-						1																																																																																																																												1																																																																																																																																			2
GAAT	-	1																																																																																																																																																																																																																																																																				1
GACA	-	1																																																																																																																																																																																																																																																																				1
GACT	-	1	1																																																																																																																																																																																																																																																																			2
GAGG	-	14	5																																																																																																																																																																																																																																																																			19
GCAA	-	9	3			1	1			1				1																																																																																																																																																																																																																																																								16
GCAC	-	4	1	1				1																																																																																																																																																																																																																																																														7
GCAG	-	129	50	41	15	8	8	6	2	1	2		3	1	1						2																																																																																																																																																																																																																																																	269
GCAT	-	22	6	1																																																																																																																																																																																																																																																																		29
GCCA	-	25	9	1	3		3	1		1	1		1																																																																																																																																																																																																																																																									45
GCCC	-	20	3	1	2																																																																																																																																																																																																																																																																	26
GCCG	-	2	5																																																																																																																																																																																																																																																																			7
GCCT	-	120	49	23	10	13	7	2	6	3	6		3		1				1		1			1					1		1																																																																																																																																																																																																																																							248
GCGA	-	1																																																																																																																																																																																																																																																																				1
GCGG	-	12	5	1			1																																																																																																																																																																																																																																																															19
GCGT	-	2		1																																																																																																																																																																																																																																																																		3
GCTC	-		1																																																																																																																																																																																																																																																																			1
GCTG	-	40	35	20	11	6				1	1																																																																																																																																																																																																																																																											114
GCTT	-	9	1															1																						1																								1				1																1																																																																																																																																																																																		15
GGAA	-	2	1																																																																																																																																																																																																																																																																			3
GGAG	-	7	5	3					1																																											1																																																																																																																																																																																																																		17
GGAT	-		1																																																																																																																																																																																																																																																																			1
GGCA	-	140	53	26	11	12	6	1	6	3	2	3		1		1	1	2		1					1																																																																																																																																																																																																																																													270
GGCC	-	6	2																																																																																																																																																																																																																																																																			8
GGCG	-	22	9	5			1			1																																																																																																																																																																																																																																																												38
GGCT	-	190	20	9	6	4	1		1	1																																																																																																																																																																																																																																																												232
GGGA	-	13	3	5	1			1					1																																																																																																																																																																																																																																																									24
GGGC	-	19	3																																																																																																																																																																																																																																																																			22
GGGT	-	30	13	3	1	1																																																																																																																																																																																																																																																																48
GGTG	-	30	18	5	2	1																																																																																																																																																																																																																																																																56
GGTT	-	2																																																																																																																																																																																																																																																																				2
GTCA	-	2																																																																																																																																																																																																																																																																				2
GTCG	-	1																																																																																																																																																																																																																																																																				1
GTGC	-	1																																																																																																																																																																																																																																																																				1
GTGG	-	20	6	4	1	1																																																																																																																																																																																																																																																																32
GTTG	-	1																																																																																																																																																																																																																																																																				1
GTTT	-	1																																																																																																																																																																																																																																																																				1
TAAG	-		1																																																																																																																																																																																																																																																																			1
TACC	-			1																																																																																																																																																																																																																																																																		1
TCAA	-	2				1																																																																																																																																																																																																																																																																3
TCCA	-									1		1																																																																																																																																																																																																																																																										2
TCCC	-	12	1	1	1																																																																																																																																																																																																																																																																	15
TCCG	-														1																																																																																																																																																																																																																																																							1
TCCT	-	1											1																																																																																																																																																																																																																																																									2
TCTG	-				1																																																																																																																																																																																																																																																																	1
TCTT	-	4							1																			1																																			1				1					1																																																																																																																																																																																														9
TGAT	-	1																																																																																																																																																																																																																																																																				1
TGCA	-	9	9	1																																																																																																																																																																																																																																																																		19
TGCC	-	84	28	21	6	3	8	1	7	1	5	1		2				1			1	2															1																																1																																																																																																																																																																																																	173
TGCT	-	13	3			1										1																			1	1																																						1																																																																																																																																																																																												21
TGGC	-	13	19	8	1	1	1			1							1																																																																																																																																																																																																																																																					45
TGGG	-	14	4	2																																																																																																																																																																																																																																																																		20
TGTC	-	1																																																																																																																																																																																																																																																																				1
TGTT	-	1		1																																																																																																																																																																																																																																																																		2
TTCC	-																																											1																																																																																																																																																																																																																										1
TTCG	-			1																																																																																																																																																																																																																																																																		1
TTCT	-	8	5	1							1																																		1	1					1							1								2				1										1								1								1		1					1																		1																																																																																																																																													28
TTGA	-	2																																									1																																																																																																																																																																																																																											3
TTGC	-	7	2	1																											1																																																																																																																																																																																																																																							11
TTGG	-	1																																																																																																																																																																																																																																																																				1
TTTA	-	1																																																																																																																																																																																																																																																																				1
TTTC	-	1	1																																																																																			1																							1																																																																																																																																																									4
TTTG	-	1																																																																																																																																																																																																																																																																				1
AAAAC																				1																																																																																																																																																																																																																																																		1
AAAAG	2																																																																																																																																																																																																																																																																					2
AAACA	3																																																																																																																																																																																																																																																																					3
AACAG	1																																																																																																																																																																																																																																																																					1
AACCG	1																																																																																																																																																																																																																																																																					1
AACGC	1																																																																																																																																																																																																																																																																					1
AACTC	1																																																																																																																																																																																																																																																																					1
AAGAA	1																																																																																																																																																																																																																																																																					1
AAGAG	1																																																																																																																																																																																																																																																																					1
AAGAT	1																																																																																																																																																																																																																																																																					1
AAGCA	2																																																																																																																																																																																																																																																																					2
AAGGC	7	1																																																																																																																																																																																																																																																																				8
AAGGG	1																																																																																																																																																																																																																																																																					1
AAGTC	107	70	7	4	3																																																																																																																																																																																																																																																																	191
AATGC	1																																																																																																																																																																																																																																																																					1
ACAAA																															1																																																																																																																																																																																																																																							1
ACACC	1																																																																																																																																																																																																																																																																					1
ACAGC	10	2	1	1	1	1																																																																																																																																																																																																																																																																16
ACAGG		1	1																																																																																																																																																																																																																																																																			2
ACCAC	1																																																																																																																																																																																																																																																																					1
ACCCA	3																																																																																																																																																																																																																																																																					3
ACCCC	15	6	3		1																																																																																																																																																																																																																																																																	25
ACCGC	2																																																																																																																																																																																																																																																																					2
ACCTC	1																																																																																																																																																																																																																																																																					1
ACGGC	1																																																																																																																																																																																																																																																																					1
ACTAC							1																																																																																																																																																																																																																																																															1
ACTGG	2																																																																																																																																																																																																																																																																					2
ACTTG	3	1	1		1																																																																																																																																																																																																																																																																	6
AGAAC	2																																																																																																																																																																																																																																																																					2
AGACT	14	11	2			1																																																																																																																																																																																																																																																																28
AGAGA	1																																																																																																																																																																																																																																																																					1
AGAGC	2																																																																																																																																																																																																																																																																					2
AGAGG	4																																																																																																																																																																																																																																																																					4
AGATA												1																																																																																																																																																																																																																																																										1
AGCAA	2																																																																																																																																																																																																																																																																					2
AGCAC	14	3			1															1																																																																																																																																																																																																																																																		19
AGCAG	6	1																																																																																																																																																																																																																																																																				7
AGCAT																	1																																																																																																																																																																																																																																																					1
AGCCA		1																																																																																																																																																																																																																																																																				1
AGCCC	7	1																																																																																																																																																																																																																																																																				8
AGCCG	1																																																																																																																																																																																																																																																																					1
AGCGC	11	2																																																																																																																																																																																																																																																																				13
AGCGG	1																																																																																																																																																																																																																																																																					1
AGCTC	1																																																																																																																																																																																																																																																																					1
AGCTT	1																																																																																																																																																																																																																																																																					1
AGGAG	2																																																																																																																																																																																																																																																																					2
AGGAT	1																																																																																																																																																																																																																																																																					1
AGGCA	9																																																																																																																																																																																																																																																																					9
AGGCC	3																																																																																																																																																																																																																																																																					3
AGGCG	4																																																																																																																																																																																																																																																																					4
AGGGA	1																																																																																																																																																																																																																																																																					1
AGGGC	37	7	1	1																																																																																																																																																																																																																																																																		46
AGGGG	21	3																																																																																																																																																																																																																																																																				24
AGGTG	1																																																																																																																																																																																																																																																																					1
AGTCA	5	1																																																																																																																																																																																																																																																																				6
AGTCT	7	4	1													1															1																																																																																																																																																																																																																																							14
AGTGC	3																																																																																																																																																																																																																																																																					3
ATAAG	10																																																																																																																																																																																																																																																																					10
ATCAC	1																																																																																																																																																																																																																																																																					1
ATCTG	1																																																																																																																																																																																																																																																																					1
ATGCA	2	1																																																																																																																																																																																																																																																																				3
ATGCC	1																																																																																																																																																																																																																																																																					1
ATGGC	2																																																																																																																																																																																																																																																																					2
ATGTA	1																																																																																																																																																																																																																																																																					1
ATTCT	1																																																																																																																																																																																																																																																																					1
ATTGC	1																																																																																																																																																																																																																																																																					1
CAAAC	1																																																																																																																																																																																																																																																																					1
CAAAG	12																																																																																																																																																																																																																																																																					12
CAACA	1																																																																																																																																																																																																																																																																					1
CAACC	1																																																																																																																																																																																																																																																																					1
CAAGA	2																																																																																																																																																																																																																																																																					2
CAAGC	1																																																																																																																																																																																																																																																																					1
CAAGG	3						1																																																																																																																																																																																																																																																															4
CAAGT	7	1																																																																																																																																																																																																																																																																				8
CAATC	1																																																																																																																																																																																																																																																																					1
CACAA	1	1																																																																																																																																																																																																																																																																				2
CACAC	3																																																																																																																																																																																																																																																																					3
CACAG	15	5	4												1																																																																																																																																																																																																																																																							25
CACAT	1																																																																																																																																																																																																																																																																					1
CACCA	1																																																																																																																																																																																																																																																																					1
CACCC	34	5	2	1																																																																																																																																																																																																																																																																		42
CACCG	2																																																																																																																																																																																																																																																																					2
CACGG		1																																																																																																																																																																																																																																																																				1
CACTG	8	1	1																																																																																																																																																																																																																																																																			10
CAGAC	1																																																																																																																																																																																																																																																																					1
CAGAG	4																																																																																																																																																																																																																																																																					4
CAGCA	31	8	4	1	5																																																																																																																																																																																																																																																																	49
CAGCC	14	1		1			1																																																																																																																																																																																																																																																															17
CAGCG	23	3		2																																																																																																																																																																																																																																																																		28
CAGCT	5		1																																																																																																																																																																																																																																																																			6
CAGGA	2																																																																																																																																																																																																																																																																					2
CAGGC	11	2																																																																																																																																																																																																																																																																				13
CAGGG	32	6	2	1	1		1																																																																																																																																																																																																																																																															43
CAGTG	2	1																																																																																																																																																																																																																																																																				3
CATAG																																		1																																																																																																																																																																																																																																				1
CATCA		1																																																																																																																																																																																																																																																																				1
CATGC	6	2	3																																																																																																																																																																																																																																																																			11
CATGG	4	1	1																																																																																																																																																																																																																																																																			6
CCAAC	2																																																																																																																																																																																																																																																																					2
CCAAG	1																																																																																																																																																																																																																																																																					1
CCACA	3																																																																																																																																																																																																																																																																					3
CCACC	24	6	3																																																																																																																																																																																																																																																																			33
CCAGC	17	3		1																																																																																																																																																																																																																																																																		21
CCAGG	3	1																																																																																																																																																																																																																																																																				4
CCATG	3		1																																																																																																																																																																																																																																																																			4
CCCAA	4																																																																																																																																																																																																																																																																					4
CCCAC	34	10	2																																																																																																																																																																																																																																																																			46
CCCAG	10	5																																																																																																																																																																																																																																																																				15
CCCAT	2																																																	1																																																																																																																																																																																																																				3
CCCCA	96	23	8	1																																																																																																																																																																																																																																																																		128
CCCCG	7	2	1																																																																																																																																																																																																																																																																			10
CCCCT	20	1	1		1																																																																																																																																																																																																																																																																	23
CCCGC	11	1																																																																																																																																																																																																																																																																				12
CCCGG	6																																																																																																																																																																																																																																																																					6
CCCTA	1																																																																																																																																																																																																																																																																					1
CCCTC	27	3																																																																																																																																																																																																																																																																				30
CCCTG	71	8	6	2	2										1																																																																																																																																																																																																																																																							90
CCCTT	1																																																																																																																																																																																																																																																																					1
CCGAG	2																																																																																																																																																																																																																																																																					2
CCGCA	1																																																																																																																																																																																																																																																																					1
CCGCC	16	2																																																																																																																																																																																																																																																																				18
CCGCG	1																																																																																																																																																																																																																																																																					1
CCGGC	2																																																																																																																																																																																																																																																																					2
CCGGG	2																																																																																																																																																																																																																																																																					2
CCGTC	1																																																																																																																																																																																																																																																																					1
CCGTG	2																																																																																																																																																																																																																																																																					2
CCTAC	1																																																																																																																																																																																																																																																																					1
CCTAG	1																																																																																																																																																																																																																																																																					1
CCTCA	1																																																																																																																																																																																																																																																																					1
CCTCC	12	2								1																																																																																																																																																																																																																																																												15
CCTCT	4																																																																																																																																																																																																																																																																					4
CCTGC	93	16	5	1	1																																																																																																																																																																																																																																																																	116
CCTGG	5																																																																																																																																																																																																																																																																					5
CCTGT	1																																																																																																																																																																																																																																																																					1
CCTTG	3																																																																																																																																																																																																																																																																					3
CGAGC	2																																																																																																																																																																																																																																																																					2
CGCAC	2																																																																																																																																																																																																																																																																					2
CGCAG	13	3																																																																																																																																																																																																																																																																				16
CGCCA	18	1																																																																																																																																																																																																																																																																				19
CGCCC	15	2		1																																																																																																																																																																																																																																																																		18
CGCCG	15																																																																																																																																																																																																																																																																					15
CGCCT	3																																																																																																																																																																																																																																																																					3
CGCGC	12																																																																																																																																																																																																																																																																					12
CGCGG	7																																																																																																																																																																																																																																																																					7
CGCTC		1																																																																																																																																																																																																																																																																				1
CGCTG	50				1																																																																																																																																																																																																																																																																	51
CGGAA	1																																																																																																																																																																																																																																																																					1
CGGCA	1	1																																																																																																																																																																																																																																																																				2
CGGCC	2																																																																																																																																																																																																																																																																					2
CGGCG	8	1																																																																																																																																																																																																																																																																				9
CGGGC	3																																																																																																																																																																																																																																																																					3
CGGGG	2		2																																																																																																																																																																																																																																																																			4
CGGTG	1			1																																																																																																																																																																																																																																																																		2
CGTGC	1			1																																																																																																																																																																																																																																																																		2
CTAGA	1	1																																																																																																																																																																																																																																																																				2
CTAGT	9	2	1															1																																																																																																																																																																																																																																																				13
CTCAA	1																																																																																																																																																																																																																																																																					1
CTCAG	1																																																																																																																																																																																																																																																																					1
CTCCA	2																																																																																																																																																																																																																																																																					2
CTCCC	9					1																																																																																																																																																																																																																																																																10
CTCCG	1																																																																																																																																																																																																																																																																					1
CTCCT	5																																																																																																																																																																																																																																																																					5
CTCGC	1																																																																																																																																																																																																																																																																					1
CTCGG			1																																																																																																																																																																																																																																																																			1
CTCTC	2																																																																																																																																																																																																																																																																					2
CTCTG	8	1																																																																																																																																																																																																																																																																				9
CTGAA	1																																																																																																																																																																																																																																																																					1
CTGCA	11			1																																																																																																																																																																																																																																																																		12
CTGCC	53	9	3	1	1		1																																																																																																																																																																																																																																																															68
CTGCG	10	1	1																																																																																																																																																																																																																																																																			12
CTGCT	17																																																																																																																																																																																																																																																																					17
CTGGA	1																																																																																																																																																																																																																																																																					1
CTGGC	3	1																																																																																																																																																																																																																																																																				4
CTGGG	11	1																																																																																																																																																																																																																																																																				12
CTGGT		1																																																																																																																																																																																																																																																																				1
CTGTC	1																																																																																																																																																																																																																																																																					1
CTGTG	7						1																																																																																																																																																																																																																																																															8
CTTAT		1																																																																																																																																																																																																																																																																				1
CTTCC	2																																																																																																																																																																																																																																																																					2
CTTCT	3																																																																																																																																																																																																																																																																					3
CTTGA	104	39	11	6									1																																																																																																																																																																																																																																																									161
CTTGC	3	1	1																																																																																																																																																																																																																																																																			5
CTTGG	1																								1																																																																																																																																																																																																																																													2
CTTTC	1																																																			1																																																																																																																																																																																																																		2
CTTTG	11																																																																																																																																																																																																																																																																					11
GAACT	1																																																																																																																																																																																																																																																																					1
GAAGC	1																																																																																																																																																																																																																																																																					1
GAATT	1																																																																																																																																																																																																																																																																					1
GACCA	1																																																																																																																																																																																																																																																																					1
GACGT	1																																																																																																																																																																																																																																																																					1
GACTA	2																																																																																																																																																																																																																																																																					2
GACTC	1																																																																																																																																																																																																																																																																					1
GACTT	3	5		1	1																																																																																																																																																																																																																																																																	10
GAGAG	3																																																																																																																																																																																																																																																																					3
GAGCA	5																																																																																																																																																																																																																																																																					5
GAGCT	1																																																																																																																																																																																																																																																																					1
GAGGA	1																																																																																																																																																																																																																																																																					1
GAGGC	3																																																																																																																																																																																																																																																																					3
GAGGG	17	1	1		1																																																																																																																																																																																																																																																																	20
GATAA	1																																																																																																																																																																																																																																																																					1
GCAAC	1																																																																																																																																																																																																																																																																					1
GCAAG	5																																																																																																																																																																																																																																																																					5
GCAAT	1																																																																																																																																																																																																																																																																					1
GCACA	22	5	3		2	1																																																																																																																																																																																																																																																																33
GCACC	2																																																																																																																																																																																																																																																																					2
GCACG	5	1																																																																																																																																																																																																																																																																				6
GCACT	1	1																																																																																																																																																																																																																																																																				2
GCAGA	2	2																															1																																																																																																																																																																																																																																					5
GCAGC	79	5	1		1																																																																																																																																																																																																																																																																	86
GCAGG	72	9	5	3																																																																																																																																																																																																																																																																		89
GCAGT	7																																																																																																																																																																																																																																																																					7
GCATG	10	3																																																																																																																																																																																																																																																																				13
GCATT	2																																																																																																																																																																																																																																																																					2
GCCAA	1																																																																																																																																																																																																																																																																					1
GCCAG	5				1																																																																																																																																																																																																																																																																	6
GCCAT	3	4																																																																																																																																																																																																																																																																				7
GCCCA	10	1		2																																																																																																																																																																																																																																																																		13
GCCCC	13	1		1																																																																																																																																																																																																																																																																		15
GCCCG	2																																																																																																																																																																																																																																																																					2
GCCCT	51	3	2	2	2																																																																																																																																																																																																																																																																	60
GCCGC	9																																																																																																																																																																																																																																																																					9
GCCGG	2																																																																																																																																																																																																																																																																					2
GCCGT	2																																																																																																																																																																																																																																																																					2
GCCTC	5																																																																																																																																																																																																																																																																					5
GCCTG	8	1		1	1																																																																																																																																																																																																																																																																	11
GCCTT	1																																																																																																																																																																																																																																																																					1
GCGAG	2																																																																																																																																																																																																																																																																					2
GCGCA	17	3																																																																																																																																																																																																																																																																				20
GCGCC	11	1																																																																																																																																																																																																																																																																				12
GCGCG	7	1																																																																																																																																																																																																																																																																				8
GCGCT	22	2																																																																																																																																																																																																																																																																				24
GCGGA	2																																																																																																																																																																																																																																																																					2
GCGGC	22	1																																																																																																																																																																																																																																																																				23
GCGGG	12			1																																																																																																																																																																																																																																																																		13
GCGGT		1																																																																																																																																																																																																																																																																				1
GCGTG	2																																																																																																																																																																																																																																																																					2
GCTAG	1																																																																																																																																																																																																																																																																					1
GCTCA	1																																																																																																																																																																																																																																																																					1
GCTCC	1	1																																																																																																																																																																																																																																																																				2
GCTCT	4																																																																																																																																																																																																																																																																					4
GCTGA	2																																																																																																																																																																																																																																																																					2
GCTGC	44	5																																																																																																																																																																																																																																																																				49
GCTGG	5	1	1	1																																																																																																																																																																																																																																																																		8
GCTGT	17	9	6			2		1																																																																																																																																																																																																																																																														35
GCTTG	1																																																																																																																																																																																																																																																																					1
GCTTT	8																																																																																																																																																																																																																																																																					8
GGAAC	1																																																																																																																																																																																																																																																																					1
GGAAG	2																																																																																																																																																																																																																																																																					2
GGAAT	1																																																																																																																																																																																																																																																																					1
GGACA	1																																																																																																																																																																																																																																																																					1
GGAGA	1																																																																																																																																																																																																																																																																					1
GGAGG	9	2																																																																																																																																																																																																																																																																				11
GGATG	2																																																																																																																																																																																																																																																																					2
GGCAA	3	1	1																																																																																																																																																																																																																																																																			5
GGCAC	2																																																																																																																																																																																																																																																																					2
GGCAG	58	8	5	1									1																																																																																																																																																																																																																																																									73
GGCAT	5	1																																																																																																																																																																																																																																																																				6
GGCCA	1	1																																																																																																																																																																																																																																																																				2
GGCCC	3			1																																																																																																																																																																																																																																																																		4
GGCCG	1																																																																																																																																																																																																																																																																					1
GGCCT	5																																																																																																																																																																																																																																																																					5
GGCGA	2					1																																																																																																																																																																																																																																																																3
GGCGC	8	1																																																																																																																																																																																																																																																																				9
GGCGG	14	2	3																																																																																																																																																																																																																																																																			19
GGCGT	2	1																																																																																																																																																																																																																																																																				3
GGCTG	9				1																																																																																																																																																																																																																																																																	10
GGCTT	3																					1																																																																																																																																																																																																																																																4
GGGAA	1																																																																																																																																																																																																																																																																					1
GGGAG	24	3																																																																																																																																																																																																																																																																				27
GGGAT	1																																																																																																																																																																																																																																																																					1
GGGCA	64	26	3	1	1									1																																																																																																																																																																																																																																																								96
GGGCC	3	1																																																																																																																																																																																																																																																																				4
GGGCG	16	3																																																																																																																																																																																																																																																																				19
GGGCT	32	1	2																																																																																																																																																																																																																																																																			35
GGGGA	11	1			1	1																																																																																																																																																																																																																																																																14
GGGGC	21	3																																																																																																																																																																																																																																																																				24
GGGGT	64	23	3																																																																																																																																																																																																																																																																			90
GGGTG	42	12	2																																																																																																																																																																																																																																																																			56
GGGTT	1																																																																																																																																																																																																																																																																					1
GGTAG	1																																																																																																																																																																																																																																																																					1
GGTCA	1																																																																																																																																																																																																																																																																					1
GGTGC	1	1																																																																																																																																																																																																																																																																				2
GGTGG	34	11	2		1																																																																																																																																																																																																																																																																	48
GGTGT	6	2																																																																																																																																																																																																																																																																				8
GGTTG	1	1																																																																																																																																																																																																																																																																				2
GTAAA	1																																																																																																																																																																																																																																																																					1
GTCAA	3	4				1																																																																																																																																																																																																																																																																8
GTCAG	1																																																																																																																																																																																																																																																																					1
GTCCA		2																																																																																																																																																																																																																																																																				2
GTCTA	8	1																																																																																																																																																																																																																																																																				9
GTGAG	1																																																																																																																																																																																																																																																																					1
GTGAT			1																																																																																																																																																																																																																																																																			1
GTGCA	10																																																																																																																																																																																																																																																																					10
GTGCC	7																																																																																																																																																																																																																																																																					7
GTGCT	6	3	1	1																																																																																																																																																																																																																																																																		11
GTGGA	1																																																																																																																																																																																																																																																																					1
GTGGG	22	4	3																																																																																																																																																																																																																																																																			29
GTGGT	2				1																																																																																																																																																																																																																																																																	3
GTGTA	1																																																																																																																																																																																																																																																																					1
GTTGC	2																																																																																																																																																																																																																																																																					2
GTTGG	4	1																																																																																																																																																																																																																																																																				5
GTTGT	1																																										1																																																																																																																																																																																																																											2
GTTTG	1																																																																																																																																																																																																																																																																					1
TAAAC	1																																																																																																																																																																																																																																																																					1
TAAGA	3		1																																																																																																																																																																																																																																																																			4
TAATG			1																																																																																																																																																																																																																																																																			1
TACAG	1																																																																																																																																																																																																																																																																					1
TAGTC	2	1																																																																																																																																																																																																																																																																				3
TATGT	1																																																																																																																																																																																																																																																																					1
TCAAG	3	2	3						1																																																																																																																																																																																																																																																													9
TCACA	1																																																																																																																																																																																																																																																																					1
TCACT	1		1																																																																																																																																																																																																																																																																			2
TCCCA	3																																																																																																																																																																																																																																																																					3
TCCCC	7					1																																																																																																																																																																																																																																																																8
TCCCT	4																																																																																																																																																																																																																																																																					4
TCCGC	1																																																																																																																																																																																																																																																																					1
TCCTC		1																																																																																																																																																																																																																																																																				1
TCCTG	3																																																																																																																																																																																																																																																																					3
TCCTT	1																																																																																																																																																																																																																																																																					1
TCGAG	1	1																																																																																																																																																																																																																																																																				2
TCGGC	1																																																																																																																																																																																																																																																																					1
TCTAG	2																																																																																																																																																																																																																																																																					2
TCTCT	1																																																																																																																																																																																																																																																																					1
TCTGA	1																																																																																																																																																																																																																																																																					1
TCTGC	8																																																																																																																																																																																																																																																																					8
TCTGG	1																																																																																																																																																																																																																																																																					1
TCTGT	6																																																																																																																																																																																																																																																																					6
TCTTA	4																																																																																																																																																																																																																																																																					4
TGACT	5	2																																																																																																																																																																																																																																																																				7
TGAGC	1																																																																																																																																																																																																																																																																					1
TGATG					1																																																																																																																																																																																																																																																																	1
TGCAA	1																																																																																																																																																																																																																																																																					1
TGCAC	1	1																																																																																																																																																																																																																																																																				2
TGCAG	10	1																																																																																																																																																																																																																																																																				11
TGCCA	8	1	1																																																																																																																																																																																																																																																																			10
TGCCC	41	7	2	1																																																																																																																																																																																																																																																																		51
TGCCG	4					1	1																																																																																																																																																																																																																																																															6
TGCCT	5	1																																																																																																																																																																																																																																																																				6
TGCGC	14	1	1																																																																																																																																																																																																																																																																			16
TGCGG	1																																																																																																																																																																																																																																																																					1
TGCTA	3		1											1										1																																																																																																																																																																																																																																														6
TGCTC	5	1	1		1																																																																																																																																																																																																																																																																	8
TGCTG	30	6	2	3	2																																																																																																																																																																																																																																																																	43
TGCTT	3	1																																																																																																																																																																																																																																																																				4
TGGCA	12	1			1																																																																																																																																																																																																																																																																	14
TGGCC	3																																																																																																																																																																																																																																																																					3
TGGCG	19																																																																																																																																																																																																																																																																					19
TGGCT	1																						1																																																																																																																																																																																																																																															2
TGGGA	1																																																																																																																																																																																																																																																																					1
TGGGC	18	4																																																																																																																																																																																																																																																																				22
TGGGG	20	3	4				1																																																																																																																																																																																																																																																															28
TGGGT	1	1																																																																																																																																																																																																																																																																				2
TGGTA	1																																																																																																																																																																																																																																																																					1
TGGTG	2																																																																																																																																																																																																																																																																					2
TGTCT	1																																																																																																																																																																																																																																																																					1
TGTGC	16	8		1		2				1																																																																																																																																																																																																																																																												28
TGTGG	1																																																																																																																																																																																																																																																																					1
TGTGT	1																																																																																																																																																																																																																																																																					1
TGTTC	2																																																																																																																																																																																																																																																																					2
TGTTT	1																																																																																																																																																																																																																																																																					1
TTCCA	1																																																																																																																																																																																																																																																																					1
TTCTC	1																																																																																																																																																																																																																																																																					1
TTCTT	1																																																																																																																																																																																																																																																																					1
TTGAC	4																																																																																																																																																																																																																																																																					4
TTGCA	1																																																																																																																																																																																																																																																																					1
TTGCC	2																																																																																																																																																																																																																																																																					2
TTGCT	2	1																																																																																																																																																																																																																																																																				3
TTGGC	1																																																																																																																																																																																																																																																																					1
TTGGG	7	2																																																																																																																																																																																																																																																																				9
TTGTG	2																																																																																																																																																																																																																																																																					2
TTTCA	1																																																																																																																																																																																																																																																																					1
TTTGC	1																																																																																																																																																																																																																																																																					1
TTTTA	1																																																																																																																																																																																																																																																																					1
TTTTG	3																																																																																																																																																																																																																																																																					3
AAAAAC	1																																																																																																																																																																																																																																																																					1
AAAGGT	9	1																																																																																																																																																																																																																																																																				10
AACCCT	2																																																																																																																																																																																																																																																																					2
AAGGAG	1																																																																																																																																																																																																																																																																					1
AAGGCA	1																																																																																																																																																																																																																																																																					1
AAGGGC	1																																																																																																																																																																																																																																																																					1
AAGGTA	3							1																																																																																																																																																																																																																																																														4
AATGGC				1																																																																																																																																																																																																																																																																		1
ACACAA	1									1																																																																																																																																																																																																																																																												2
ACACCC	1					1																																																																																																																																																																																																																																																																2
ACACTC	1																																																																																																																																																																																																																																																																					1
ACAGAC						1																																																																																																																																																																																																																																																																1
ACAGCC	3																																																																																																																																																																																																																																																																					3
ACCAGC	1																																																																																																																																																																																																																																																																					1
ACCCAC		1																																																																																																																																																																																																																																																																				1
ACCCCA	3	1																																																																																																																																																																																																																																																																				4
ACCCCC	2																																																																																																																																																																																																																																																																					2
ACCCTG	2																																																																																																																																																																																																																																																																					2
ACCGGC	1																																																																																																																																																																																																																																																																					1
ACCTTT	35	13																																																																																																																																																																																																																																																																				48
ACTCCC	1																																																																																																																																																																																																																																																																					1
ACTGTG	1																																																																																																																																																																																																																																																																					1
AGAAGC	1																																																																																																																																																																																																																																																																					1
AGACGC		1																																																																																																																																																																																																																																																																				1
AGAGGA		1																																																																																																																																																																																																																																																																				1
AGAGGC	2																																																																																																																																																																																																																																																																					2
AGATGA	1																																																																																																																																																																																																																																																																					1
AGCACA						1																																																																																																																																																																																																																																																																1
AGCAGA	2																																																																																																																																																																																																																																																																					2
AGCAGG	11	1																																																																																																																																																																																																																																																																				12
AGCCAC	1																																																																																																																																																																																																																																																																					1
AGCCCA	1																																																																																																																																																																																																																																																																					1
AGCCCC	2																																																																																																																																																																																																																																																																					2
AGCCCG	1																																																																																																																																																																																																																																																																					1
AGCCGC	3			1																																																																																																																																																																																																																																																																		4
AGCCGG	1																																																																																																																																																																																																																																																																					1
AGCGCC	1																																																																																																																																																																																																																																																																					1
AGCGCT	1																																																																																																																																																																																																																																																																					1
AGCGGC	5		1																																																																																																																																																																																																																																																																			6
AGCTGC	4																																																																																																																																																																																																																																																																					4
AGGAAG	1																																																																																																																																																																																																																																																																					1
AGGAGC	5																																																																																																																																																																																																																																																																					5
AGGCAG	4	1																																																																																																																																																																																																																																																																				5
AGGCCG	1																																																																																																																																																																																																																																																																					1
AGGCGC	1																																																																																																																																																																																																																																																																					1
AGGGAG	3																																																																																																																																																																																																																																																																					3
AGGGCA	2																																																																																																																																																																																																																																																																					2
AGGGCG	1																																																																																																																																																																																																																																																																					1
AGGGGC	1	3																																																																																																																																																																																																																																																																				4
AGGGGG	4																																																																																																																																																																																																																																																																					4
AGGTAA	11																																																																																																																																																																																																																																																																					11
AGGTGC	1																																																																																																																																																																																																																																																																					1
AGTCCC	1																																																																																																																																																																																																																																																																					1
AGTGAT	1																																																																																																																																																																																																																																																																					1
ATGCCG					1																																																																																																																																																																																																																																																																	1
ATTACT	1																																																																																																																																																																																																																																																																					1
CAAAAA	1																																																																																																																																																																																																																																																																					1
CAACAG	2																																																																																																																																																																																																																																																																					2
CAACGG	1																																																																																																																																																																																																																																																																					1
CAAGGC	1																																																																																																																																																																																																																																																																					1
CAAGGG	2				1																																																																																																																																																																																																																																																																	3
CACACC	1		1																																																																																																																																																																																																																																																																			2
CACACT			1																																																																																																																																																																																																																																																																			1
CACAGC	1																																																																																																																																																																																																																																																																					1
CACAGG	1																																																																																																																																																																																																																																																																					1
CACATG	1																																																																																																																																																																																																																																																																					1
CACCAA	1																																																																																																																																																																																																																																																																					1
CACCAG	2																																																																																																																																																																																																																																																																					2
CACCCA	3	1																																																																																																																																																																																																																																																																				4
CACCCC	3	1	1	2																																																																																																																																																																																																																																																																		7
CACCTG	1																																																																																																																																																																																																																																																																					1
CACGCA	1																																																																																																																																																																																																																																																																					1
CACGGG	2																																																																																																																																																																																																																																																																					2
CACTAC	1																																																																																																																																																																																																																																																																					1
CAGAGG	2																																																																																																																																																																																																																																																																					2
CAGCAA	1																																																																																																																																																																																																																																																																					1
CAGCAC	3	1																																																																																																																																																																																																																																																																				4
CAGCAT	2																																																																																																																																																																																																																																																																					2
CAGCCC	2																																																																																																																																																																																																																																																																					2
CAGCCG	3																																																																																																																																																																																																																																																																					3
CAGCCT	1																																																																																																																																																																																																																																																																					1
CAGCGA	7																																																																																																																																																																																																																																																																					7
CAGCGC	6																																																																																																																																																																																																																																																																					6
CAGCGG	12	3																																																																																																																																																																																																																																																																				15
CAGCTC	1																																																																																																																																																																																																																																																																					1
CAGCTG	2																																																																																																																																																																																																																																																																					2
CAGGAG	1																																																																																																																																																																																																																																																																					1
CAGGCA	1																																																																																																																																																																																																																																																																					1
CAGGCC	1																																																																																																																																																																																																																																																																					1
CAGGCG	1																																																																																																																																																																																																																																																																					1
CAGGCT	1																																																																																																																																																																																																																																																																					1
CAGGGA	3																																																																																																																																																																																																																																																																					3
CAGGGG	2																																																																																																																																																																																																																																																																					2
CAGTGC	2																																																																																																																																																																																																																																																																					2
CATAAC	1																																																																																																																																																																																																																																																																					1
CATCAG	1																																																																																																																																																																																																																																																																					1
CATCCT	1																																																																																																																																																																																																																																																																					1
CATGCA	1																																																																																																																																																																																																																																																																					1
CATGCC	1																																																																																																																																																																																																																																																																					1
CCAACC	1																																																																																																																																																																																																																																																																					1
CCACAC	2	1																																																																																																																																																																																																																																																																				3
CCACCC	2																																																																																																																																																																																																																																																																					2
CCACCG	2																																																																																																																																																																																																																																																																					2
CCACCT	1																																																																																																																																																																																																																																																																					1
CCACGA	1																																																																																																																																																																																																																																																																					1
CCAGCA	5																																																																																																																																																																																																																																																																					5
CCAGCC	2	1																																																																																																																																																																																																																																																																				3
CCAGCG	5																																																																																																																																																																																																																																																																					5
CCAGCT	2																																																																																																																																																																																																																																																																					2
CCATCG	1																																																																																																																																																																																																																																																																					1
CCATGC	1																																																																																																																																																																																																																																																																					1
CCCAAA			1																																																																																																																																																																																																																																																																			1
CCCAAC	1						1																																																																																																																																																																																																																																																															2
CCCACC	7	3																																																																																																																																																																																																																																																																				10
CCCAGC	1	1																																																																																																																																																																																																																																																																				2
CCCCAA	2			1																																																																																																																																																																																																																																																																		3
CCCCAC	13	3																																																																																																																																																																																																																																																																				16
CCCCAG	2																																																																																																																																																																																																																																																																					2
CCCCCA	29	9																																																																																																																																																																																																																																																																				38
CCCCCT	1																																																																																																																																																																																																																																																																					1
CCCCGC	2																																																																																																																																																																																																																																																																					2
CCCCTC	3																																																																																																																																																																																																																																																																					3
CCCCTG	8	1																																																																																																																																																																																																																																																																				9
CCCGCA	4																																																																																																																																																																																																																																																																					4
CCCGCT	2																																																																																																																																																																																																																																																																					2
CCCTCA	1																																																																																																																																																																																																																																																																					1
CCCTCC	2																																																																																																																																																																																																																																																																					2
CCCTCG	21																																																																																																																																																																																																																																																																					21
CCCTGC	11	3	1																																																																																																																																																																																																																																																																			15
CCCTGG	2																																																																																																																																																																																																																																																																					2
CCCTTG		1	1																																																																																																																																																																																																																																																																			2
CCGCAC	1																																																																																																																																																																																																																																																																					1
CCGCAG	7	2																																																																																																																																																																																																																																																																				9
CCGCCA	13																																																																																																																																																																																																																																																																					13
CCGCCC	3																																																																																																																																																																																																																																																																					3
CCGCCT	5																																																																																																																																																																																																																																																																					5
CCGCGC	4																																																																																																																																																																																																																																																																					4
CCGCGG	1																																																																																																																																																																																																																																																																					1
CCGCTC	2																																																																																																																																																																																																																																																																					2
CCGCTG	18	2			1																																																																																																																																																																																																																																																																	21
CCGGCA	1																																																																																																																																																																																																																																																																					1
CCGGCC	1																																																																																																																																																																																																																																																																					1
CCGGCG	3																																																																																																																																																																																																																																																																					3
CCGGCT	1																																																																																																																																																																																																																																																																					1
CCGTTG	1																																																																																																																																																																																																																																																																					1
CCTCCA	3																																																																																																																																																																																																																																																																					3
CCTCCC	3	1																																																																																																																																																																																																																																																																				4
CCTCGC	5	1																																																																																																																																																																																																																																																																				6
CCTCGG	1																																																																																																																																																																																																																																																																					1
CCTCGT	1																																																																																																																																																																																																																																																																					1
CCTCTG	3																																																																																																																																																																																																																																																																					3
CCTGCA	3																																																																																																																																																																																																																																																																					3
CCTGCC	7	1																																																																																																																																																																																																																																																																				8
CCTGCG	3																																																																																																																																																																																																																																																																					3
CCTGCT	10																																																																																																																																																																																																																																																																					10
CCTGGC	1																																																																																																																																																																																																																																																																					1
CCTTGC		1																																																																																																																																																																																																																																																																				1
CCTTGG		1																																																																																																																																																																																																																																																																				1
CCTTTA	1	1																																																																																																																																																																																																																																																																				2
CGACCT	1																																																																																																																																																																																																																																																																					1
CGCAGC	12	1						1																																																																																																																																																																																																																																																														14
CGCAGG	1																																																																																																																																																																																																																																																																					1
CGCCAC	1																																																																																																																																																																																																																																																																					1
CGCCAG	7																																																																																																																																																																																																																																																																					7
CGCCCA	1																																																																																																																																																																																																																																																																					1
CGCCCC	2	1																																																																																																																																																																																																																																																																				3
CGCCCG	3																																																																																																																																																																																																																																																																					3
CGCCCT	2																																																																																																																																																																																																																																																																					2
CGCCGG	8																																																																																																																																																																																																																																																																					8
CGCCTC	2																																																																																																																																																																																																																																																																					2
CGCCTG	8																																																																																																																																																																																																																																																																					8
CGCGAC	1																																																																																																																																																																																																																																																																					1
CGCGCA	2																																																																																																																																																																																																																																																																					2
CGCGGC	2																																																																																																																																																																																																																																																																					2
CGCGGG	1																																																																																																																																																																																																																																																																					1
CGCTCC	1																																																																																																																																																																																																																																																																					1
CGCTGC	21	6																																																																																																																																																																																																																																																																				27
CGCTGG	1																																																																																																																																																																																																																																																																					1
CGGCAG	17	2																																																																																																																																																																																																																																																																				19
CGGCCG	1																																																																																																																																																																																																																																																																					1
CGGCGC	13	1																																																																																																																																																																																																																																																																				14
CGGCTG	13	1																																																																																																																																																																																																																																																																				14
CGGGCG	1																																																																																																																																																																																																																																																																					1
CGGGGG	2																																																																																																																																																																																																																																																																					2
CGGTGG	1																																																																																																																																																																																																																																																																					1
CGTCCT	1																																																																																																																																																																																																																																																																					1
CGTGAG	1																																																																																																																																																																																																																																																																					1
CGTGCT		1																																																																																																																																																																																																																																																																				1
CGTTGC	1																																																																																																																																																																																																																																																																					1
CTCAGC	1																																																																																																																																																																																																																																																																					1
CTCCCC	3																																																																																																																																																																																																																																																																					3
CTCCCG	1	1																																																																																																																																																																																																																																																																				2
CTCCTG	1	1																																																																																																																																																																																																																																																																				2
CTCCTT	3																																																																																																																																																																																																																																																																					3
CTCGCC	1																																																																																																																																																																																																																																																																					1
CTCGGG	1																																																																																																																																																																																																																																																																					1
CTCGTC	2																																																																																																																																																																																																																																																																					2
CTCTCA	1																																																																																																																																																																																																																																																																					1
CTCTGC	2																																																																																																																																																																																																																																																																					2
CTGCAG	1																																																																																																																																																																																																																																																																					1
CTGCAT		1																																																																																																																																																																																																																																																																				1
CTGCCA	5																																																																																																																																																																																																																																																																					5
CTGCCC	8																																																																																																																																																																																																																																																																					8
CTGCCG	14	4																																																																																																																																																																																																																																																																				18
CTGCCT	1	1																																																																																																																																																																																																																																																																				2
CTGCGC	6	1																																																																																																																																																																																																																																																																				7
CTGCGG	3																																																																																																																																																																																																																																																																					3
CTGCTC	4																																																																																																																																																																																																																																																																					4
CTGGAC	1																																																																																																																																																																																																																																																																					1
CTGGAG	1																																																																																																																																																																																																																																																																					1
CTGGCC	4				1																																																																																																																																																																																																																																																																	5
CTGGCG	1																																																																																																																																																																																																																																																																					1
CTGGGA	1																																																																																																																																																																																																																																																																					1
CTGGGC	2																																																																																																																																																																																																																																																																					2
CTGGTG		3																																																																																																																																																																																																																																																																				3
CTTGCC	1																																																																																																																																																																																																																																																																					1
CTTGGC	1																																																																																																																																																																																																																																																																					1
CTTGGG		1																																																																																																																																																																																																																																																																				1
GAAAGT	1																																																																																																																																																																																																																																																																					1
GAAGAG	1																																																																																																																																																																																																																																																																					1
GACACA	1																																																																																																																																																																																																																																																																					1
GACCTG	1	1																																																																																																																																																																																																																																																																				2
GACGAG	2																																																																																																																																																																																																																																																																					2
GACTGT	1																																																																																																																																																																																																																																																																					1
GAGCAG	3																																																																																																																																																																																																																																																																					3
GAGCCA	1																																																																																																																																																																																																																																																																					1
GAGCGA	1																																																																																																																																																																																																																																																																					1
GAGCGC		1																																																																																																																																																																																																																																																																				1
GAGCGG			1																																																																																																																																																																																																																																																																			1
GAGCTA	1																																																																																																																																																																																																																																																																					1
GAGCTG	1																																																																																																																																																																																																																																																																					1
GAGGCA	9																																																																																																																																																																																																																																																																					9
GAGGCG	2	1																																																																																																																																																																																																																																																																				3
GAGGCT	1																																																																																																																																																																																																																																																																					1
GAGGGA	2																																																																																																																																																																																																																																																																					2
GAGGGC	1																																																																																																																																																																																																																																																																					1
GAGGTG	2																																																																																																																																																																																																																																																																					2
GAGTGG	1																																																																																																																																																																																																																																																																					1
GATGCT	1																																																																																																																																																																																																																																																																					1
GCAAGA	1																																																																																																																																																																																																																																																																					1
GCAAGG	3																																																																																																																																																																																																																																																																					3
GCAAGT	1																																																																																																																																																																																																																																																																					1
GCACAG	1																																																																																																																																																																																																																																																																					1
GCACAT	2																																																																																																																																																																																																																																																																					2
GCACCA	2																																																																																																																																																																																																																																																																					2
GCAGAG	5	2																																																																																																																																																																																																																																																																				7
GCAGCC	16																																																																																																																																																																																																																																																																					16
GCAGCG	46	5																																																																																																																																																																																																																																																																				51
GCAGCT	7																																																																																																																																																																																																																																																																					7
GCAGGA	2		1																																																																																																																																																																																																																																																																			3
GCAGGC	10																																																																																																																																																																																																																																																																					10
GCAGGG	8	3																																																																																																																																																																																																																																																																				11
GCAGGT	1		1																																																																																																																																																																																																																																																																			2
GCAGTC	1																																																																																																																																																																																																																																																																					1
GCATGG	1	1	1																																																																																																																																																																																																																																																																			3
GCATGT	1																																																																																																																																																																																																																																																																					1
GCATTG							1																																																																																																																																																																																																																																																															1
GCCAAG	2																																																																																																																																																																																																																																																																					2
GCCAAT	1																																																																																																																																																																																																																																																																					1
GCCACC	4	2	1																																																																																																																																																																																																																																																																			7
GCCACT	1																																																																																																																																																																																																																																																																					1
GCCAGA	3																																																																																																																																																																																																																																																																					3
GCCAGC	3																																																																																																																																																																																																																																																																					3
GCCCAA	1																																																																																																																																																																																																																																																																					1
GCCCAG	2																																																																																																																																																																																																																																																																					2
GCCCCA	1																																																																																																																																																																																																																																																																					1
GCCCCC	4	1		1																																																																																																																																																																																																																																																																		6
GCCCCG	1																																																																																																																																																																																																																																																																					1
GCCCCT	2	1																																																																																																																																																																																																																																																																				3
GCCCTC	5																																																																																																																																																																																																																																																																					5
GCCCTG	1																																																																																																																																																																																																																																																																					1
GCCGCA	7	6																																																																																																																																																																																																																																																																				13
GCCGCG	4																																																																																																																																																																																																																																																																					4
GCCGCT	40	4	1	1																																																																																																																																																																																																																																																																		46
GCCGGC	9	1																																																																																																																																																																																																																																																																				10
GCCGTA	1																																																																																																																																																																																																																																																																					1
GCCGTT	2																																																																																																																																																																																																																																																																					2
GCCTCC	2																																																																																																																																																																																																																																																																					2
GCCTCG	1																																																																																																																																																																																																																																																																					1
GCCTCT	4	2	1																																																																																																																																																																																																																																																																			7
GCCTGA	1																																																																																																																																																																																																																																																																					1
GCCTGC	5																																																																																																																																																																																																																																																																					5
GCCTTG	1																																																																																																																																																																																																																																																																					1
GCGAGG	2	1																																																																																																																																																																																																																																																																				3
GCGCAG	5																																																																																																																																																																																																																																																																					5
GCGCCA	4																																																																																																																																																																																																																																																																					4
GCGCCC	1																																																																																																																																																																																																																																																																					1
GCGCCG	15	1																																																																																																																																																																																																																																																																				16
GCGCCT	5																																																																																																																																																																																																																																																																					5
GCGCGG	1	1																																																																																																																																																																																																																																																																				2
GCGCTG	7																																																																																																																																																																																																																																																																					7
GCGCTT	1																																																																																																																																																																																																																																																																					1
GCGGCA	41	2																																																																																																																																																																																																																																																																				43
GCGGCC	3																																																																																																																																																																																																																																																																					3
GCGGCT	10	1																																																																																																																																																																																																																																																																				11
GCGGGA	3	1																																																																																																																																																																																																																																																																				4
GCGGGC	2																																																																																																																																																																																																																																																																					2
GCGGGG	1		1		1																																																																																																																																																																																																																																																																	3
GCGGTG	2																																																																																																																																																																																																																																																																					2
GCGTAA	1																																																																																																																																																																																																																																																																					1
GCGTGT																		1																																																																																																																																																																																																																																																				1
GCGTTG		1																																																																																																																																																																																																																																																																				1
GCTCAC	1																																																																																																																																																																																																																																																																					1
GCTCAG	2																																																																																																																																																																																																																																																																					2
GCTCCA	1																																																																																																																																																																																																																																																																					1
GCTCCT	5																																																																																																																																																																																																																																																																					5
GCTCGT	1																																																																																																																																																																																																																																																																					1
GCTGCA	6																																																																																																																																																																																																																																																																					6
GCTGCC	41	6	2		1			1																																																																																																																																																																																																																																																														51
GCTGCG	17	2	2	1																																																																																																																																																																																																																																																																		22
GCTGGC	5																																																																																																																																																																																																																																																																					5
GCTGGG	3																																																																																																																																																																																																																																																																					3
GCTGTC	1																																																																																																																																																																																																																																																																					1
GCTTCC	1																																																																																																																																																																																																																																																																					1
GCTTCT		1																																																																																																																																																																																																																																																																				1
GCTTGG	1																																																																																																																																																																																																																																																																					1
GGAAGG	1																																																																																																																																																																																																																																																																					1
GGACCA	1																																																																																																																																																																																																																																																																					1
GGAGCA	4																																																																																																																																																																																																																																																																					4
GGAGCC	2																																																																																																																																																																																																																																																																					2
GGAGCG	3																																																																																																																																																																																																																																																																					3
GGAGGC	1																																																																																																																																																																																																																																																																					1
GGAGGG	5		1	1																																																																																																																																																																																																																																																																		7
GGATGT		1																																																																																																																																																																																																																																																																				1
GGCAAG	2	1																																																																																																																																																																																																																																																																				3
GGCAGA	1																																																																																																																																																																																																																																																																					1
GGCAGC	23	3	2	2	1	1																																																																																																																																																																																																																																																																32
GGCAGG	11	3																																																																																																																																																																																																																																																																				14
GGCAGT	2	1																																																																																																																																																																																																																																																																				3
GGCATG	1																																																																																																																																																																																																																																																																					1
GGCCAG	1																																																																																																																																																																																																																																																																					1
GGCCAT	1																																																																																																																																																																																																																																																																					1
GGCCCG	2																																																																																																																																																																																																																																																																					2
GGCCCT	3																																																																																																																																																																																																																																																																					3
GGCCGC	7																																																																																																																																																																																																																																																																					7
GGCCTG	1																																																																																																																																																																																																																																																																					1
GGCGAG	3	1	1	1																																																																																																																																																																																																																																																																		6
GGCGCA	5																																																																																																																																																																																																																																																																					5
GGCGCC	14																																																																																																																																																																																																																																																																					14
GGCGCG	1																																																																																																																																																																																																																																																																					1
GGCGCT	2																																																																																																																																																																																																																																																																					2
GGCGGG	6	1																																																																																																																																																																																																																																																																				7
GGCGGT	6	1																																																																																																																																																																																																																																																																				7
GGCTAC	1																																																																																																																																																																																																																																																																					1
GGCTCA	2																																																																																																																																																																																																																																																																					2
GGCTGC	14	4																																																																																																																																																																																																																																																																				18
GGCTGG	1																																																																																																																																																																																																																																																																					1
GGCTGT	1																																																																																																																																																																																																																																																																					1
GGCTTC	1																																																																																																																																																																																																																																																																					1
GGCTTG	1	1																																																																																																																																																																																																																																																																				2
GGGAAG		1																																																																																																																																																																																																																																																																				1
GGGAGA	2																																																																																																																																																																																																																																																																					2
GGGAGC			1																																																																																																																																																																																																																																																																			1
GGGAGG	5																																																																																																																																																																																																																																																																					5
GGGATG	2																																																																																																																																																																																																																																																																					2
GGGCAG	9	1							1																																																																																																																																																																																																																																																													11
GGGCAT	1																																																																																																																																																																																																																																																																					1
GGGCCA	1																																																																																																																																																																																																																																																																					1
GGGCCC	1																																																																																																																																																																																																																																																																					1
GGGCCT		1																																																																																																																																																																																																																																																																				1
GGGCGA	3	1																																																																																																																																																																																																																																																																				4
GGGCGC			1																																																																																																																																																																																																																																																																			1
GGGCGG	1																																																																																																																																																																																																																																																																					1
GGGCTG	2																																																																																																																																																																																																																																																																					2
GGGGAG	2																																																																																																																																																																																																																																																																					2
GGGGCA	6	1																																																																																																																																																																																																																																																																				7
GGGGCC	1																																																																																																																																																																																																																																																																					1
GGGGCG	1	2																																																																																																																																																																																																																																																																				3
GGGGCT	5	1																																																																																																																																																																																																																																																																				6
GGGGGA	4																																																																																																																																																																																																																																																																					4
GGGGGC	3																																																																																																																																																																																																																																																																					3
GGGGGT	18	2	1																																																																																																																																																																																																																																																																			21
GGGGTG	16	5																																																																																																																																																																																																																																																																				21
GGGGTT	1		1		1																																																																																																																																																																																																																																																																	3
GGGTGG	10	4																																																																																																																																																																																																																																																																				14
GGGTGT	1																																																																																																																																																																																																																																																																					1
GGGTTG	1																																																																																																																																																																																																																																																																					1
GGTAAA	7	3																																																																																																																																																																																																																																																																				10
GGTCCT	1																																																																																																																																																																																																																																																																					1
GGTGCA	2																																																																																																																																																																																																																																																																					2
GGTGCG	1																																																																																																																																																																																																																																																																					1
GGTGCT	3	1																																																																																																																																																																																																																																																																				4
GGTGGA	1																																																																																																																																																																																																																																																																					1
GGTGGC	5		2																																																																																																																																																																																																																																																																			7
GGTGGG	6																																																																																																																																																																																																																																																																					6
GGTTGG				1																1																																																																																																																																																																																																																																																		2
GGTTGT		1																																																																																																																																																																																																																																																																				1
GTAAAG	3	2																																																																																																																																																																																																																																																																				5
GTCACA	1																																																																																																																																																																																																																																																																					1
GTCAGT	1																																																																																																																																																																																																																																																																					1
GTCGCC	1																																																																																																																																																																																																																																																																					1
GTCGCT	2																																																																																																																																																																																																																																																																					2
GTCGGT	1																																																																																																																																																																																																																																																																					1
GTGCAG	1																																																																																																																																																																																																																																																																					1
GTGCCC	1																																																																																																																																																																																																																																																																					1
GTGCCG	1																																																																																																																																																																																																																																																																					1
GTGCTG	2	2																																																																																																																																																																																																																																																																				4
GTGGCG	5																																																																																																																																																																																																																																																																					5
GTGGCT	2																																																																																																																																																																																																																																																																					2
GTGGGG	6	1																																																																																																																																																																																																																																																																				7
GTGTGG	1		1																																																																																																																																																																																																																																																																			2
GTTGGT	1																																																																																																																																																																																																																																																																					1
TAAAGG	10	5																																																																																																																																																																																																																																																																				15
TATTTT	1																																																																																																																																																																																																																																																																					1
TCATCT	1																																																																																																																																																																																																																																																																					1
TCATGC	1																																																																																																																																																																																																																																																																					1
TCCATG	1																																																																																																																																																																																																																																																																					1
TCCCCG	1																																																																																																																																																																																																																																																																					1
TCCCTC	1																																																																																																																																																																																																																																																																					1
TCCTGA	1																																																																																																																																																																																																																																																																					1
TCCTTG	2																																																																																																																																																																																																																																																																					2
TCGCGG	1																																																																																																																																																																																																																																																																					1
TCGCTG	3		1																																																																																																																																																																																																																																																																			4
TCTCCA	1																																																																																																																																																																																																																																																																					1
TCTCCC	1																																																																																																																																																																																																																																																																					1
TCTCCT	1																																																																																																																																																																																																																																																																					1
TCTGCG												1																																																																																																																																																																																																																																																										1
TCTTTC	1																																																																																																																																																																																																																																																																					1
TGACTG	1																																																																																																																																																																																																																																																																					1
TGCACC	1																																																																																																																																																																																																																																																																					1
TGCACG	1																																																																																																																																																																																																																																																																					1
TGCAGC	3																																																																																																																																																																																																																																																																					3
TGCAGG	2																																																																																																																																																																																																																																																																					2
TGCCCA	2																																																																																																																																																																																																																																																																					2
TGCCCC	1																																																																																																																																																																																																																																																																					1
TGCCGC	20																																																																																																																																																																																																																																																																					20
TGCCGG	1																																																																																																																																																																																																																																																																					1
TGCCTC	3																																																																																																																																																																																																																																																																					3
TGCCTG	2																																																																																																																																																																																																																																																																					2
TGCGCC	2	2																																																																																																																																																																																																																																																																				4
TGCGCT	1																																																																																																																																																																																																																																																																					1
TGCTCA	1																																																																																																																																																																																																																																																																					1
TGCTGA	1																																																																																																																																																																																																																																																																					1
TGCTGG	7	3	1				1																																																																																																																																																																																																																																																															12
TGCTTC	1																																																																																																																																																																																																																																																																					1
TGGACG	1																																																																																																																																																																																																																																																																					1
TGGATG	1																																																																																																																																																																																																																																																																					1
TGGCGC	1																																																																																																																																																																																																																																																																					1
TGGCGG	5																																																																																																																																																																																																																																																																					5
TGGCTC	1																																																																																																																																																																																																																																																																					1
TGGCTG	1																																																																																																																																																																																																																																																																					1
TGGGCA	1																																																																																																																																																																																																																																																																					1
TGGGCC	1																																																																																																																																																																																																																																																																					1
TGGGCT	2																																																																																																																																																																																																																																																																					2
TGGGGG	8																																																																																																																																																																																																																																																																					8
TGGGGT	1																																																																																																																																																																																																																																																																					1
TGGTGC	1																																																																																																																																																																																																																																																																					1
TGGTGT	1																																																																																																																																																																																																																																																																					1
TGTCGC	2																																																																																																																																																																																																																																																																					2
TGTGCG	1																																																																																																																																																																																																																																																																					1
TGTTTG	1																																																																																																																																																																																																																																																																					1
TGTTTT		1																																																																																																																																																																																																																																																																				1
TTAATG	1																																																																																																																																																																																																																																																																					1
TTGACT		5																																																																																																																																																																																																																																																																				5
TTGCCC	1																																																																																																																																																																																																																																																																					1
TTGCCG	1																																																																																																																																																																																																																																																																					1
TTGCTG		1																																																																																																																																																																																																																																																																				1
TTGCTT	1																																																																																																																																																																																																																																																																					1
TTGGGC	1	1																																																																																																																																																																																																																																																																				2
TTTACC	1																																																																																																																																																																																																																																																																					1
TTTGTG			1																																																																																																																																																																																																																																																																			1
TTTTAT																																	1																																																																																																																																																																																																																																					1
TTTTCG	1																																																																																																																																																																																																																																																																					1
TTTTTA		1									1																																																																																																																																																																																																																																																											2
TTTTTG	1																																	1																																																																																																																																																																																																																																				2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	229	230	231	232	233	234	235	236	237	238	239	240	241	242	243	244	245	246	247	248	249	250	251	252	253	254	255	256	257	258	259	260	261	262	263	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	2			3	2	4		1	1			3				1	5	1	1		1				1									1				1							1																						1																																																																																																																																																																																	31
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	136	125	106	100	83	47	47	44	35	18	9	7	5	5	3	2	3	1			1							1							1			1																															1																																																																																																																																																																																781
AC/GT	-	-	-	303	153	117	71	28	28	11	10	5	7	1	4	1	2	1				3	1	2					1	1	1													1																																																																																																																															1																																																																																											753
AG/CT	-	-	-	136	44	28	10	10	6	4	3	1		1		1	1	1					1																																																													1																																																																																																																																																																																		248
AT/AT	-	-	-	3		3				1																																																																																																																																																																																																																																																												7
CG/CG	-	-	-	54	7			1																																																																																																																																																																																																																																																														62
AAC/GTT	-	-	26	10	5	2	1	1																																																																																																																																																																																																																																																														45
AAG/CTT	-	-	82	31	29	5	2	1	1						1															2	1																													1																																	1				1																				1									1	1																																																																																1																																																							162
AAT/ATT	-	-			1																																																																																																																																				1																																																							1																																																																						3
ACC/GGT	-	-	107	50	21	10	5	4	3	1	1																																																																																																																																																																																																																																																											202
ACG/CGT	-	-	4																																																																																																																																																																																																																																																																			4
ACT/AGT	-	-																								1																																																																																																																																																																																																																																												1
AGC/CTG	-	-	2476	1210	650	406	251	168	134	95	72	42	35	26	17	18	9	13	11	4	5	3	1	3	1			1	2	1	2	2					1	1				1					1				1							1																																																																																																																																																																																																												5664
AGG/CCT	-	-	330	136	57	23	13	4	3	3	3	1	4		1																			1																																																																																																																																																																																																																																				579
ATC/ATG	-	-	16	3		1											1									1																									1																																																																																																																																																																																																																			23
CCG/CGG	-	-	2004	664	256	102	30	9	9	2	3	1													1																																																																																																																																																																																																																																													3081
AAAC/GTTT	-	5		1																			1																																																																																																																																																																																																																																															7
AAAG/CTTT	-	42	15	3	2			1	2		1			1			1											1		1					1										1	2					1							2		2	1	1	1		1	3	2			1		1	1		1			1		1	1					2	1	2			1			1		1		1		1			1		2		1		1									1			1												1																																																																																																																																	113
AAAT/ATTT	-	1																																																																																																																																																																																																																																																																				1
AACC/GGTT	-	8												1																																																																																																																																																																																																																																																								9
AACG/CGTT	-			1																																																																																																																																																																																																																																																																		1
AAGC/CTTG	-	53	15	3		2	1	1	1	2	2			1		2		1	1							1			1		1		1		1	1				1		1						1																1				1						1										1																																																																																																																																																																																		98
AAGG/CCTT	-	8	2	1			3						1																				1											1																																																																			1												1								1					1																1																1																																																																																														23
AAGT/ACTT	-	2	1																																																																																																																																																																																																																																																																			3
AATC/ATTG	-	13	4	1	1	1									1													1															1							1																																																																																																																							1																																																																																												1	26
AATG/ATTC	-	3	1																																																																																																																																																																																																																																																																			4
ACAG/CTGT	-	3	1		1																																																																																																																																																																																																																																																																	5
ACCC/GGGT	-	187	87	31	10	3																																																																																																																																																																																																																																																																318
ACCG/CGGT	-	2																																																																																																																																																																																																																																																																				2
ACCT/AGGT	-	1		1																																																																																																																																																																																																																																																																		2
ACGC/CGTG	-	9	1	2				1										1																																																																																																																																																																																																																																																				14
ACGG/CCGT	-	1													1																																																																																																																																																																																																																																																							2
ACTC/AGTG	-	1																							1																																																																																																																																																																																																																																													2
ACTG/AGTC	-	8	2			1																																																																																																																																																																																																																																																																11
AGCC/CTGG	-	550	175	87	38	16	6	6	5	6	2	3	2				1																																																																																																																																																																																																																																																					897
AGCG/CGCT	-	1	2																																																																																																																																																																																																																																																																			3
AGGC/CCTG	-	833	319	174	74	53	48	22	32	15	18	12	11	8	4	4	4	4	3	3	5	4	2	2	2			1	1	1	1						1	1		1																													1																																																																																																																																																																																																	1664
AGGG/CCCT	-	121	33	19	4		1	2	1	1		1	1																																							1																																																																																																																																																																																																																		185
ATCC/ATGG	-	3	4							1		1																																																																																																																																																																																																																																																										9
ATGC/ATGC	-	43	16	4	1																																																																																																																																																																																																																																																																	64
CCCG/CGGG	-	99	26	10	2	1	3		1	1																																																																																																																																																																																																																																																												143
CCGG/CCGG	-	15	7																																																																																																																																																																																																																																																																			22
AAAAC/GTTTT	7																			1											1																																																																																																																																																																																																																																							9
AAAAG/CTTTT	4																																																																																																																																																																																																																																																																					4
AAAAT/ATTTT	1																																																																																																																																																																																																																																																																					1
AAACC/GGTTT	2																																																																																																																																																																																																																																																																					2
AAACT/AGTTT	1																																																																																																																																																																																																																																																																					1
AAAGC/CTTTG	41	2																																																																																																																																																																																																																																																																				43
AAAGG/CCTTT	2																																																			1																																																																																																																																																																																																																		3
AAAGT/ACTTT	1																																																																																																																																																																																																																																																																					1
AAATG/ATTTC	1																																																																																																																																																																																																																																																																					1
AACAC/GTGTT	6	1																																									1																																																																																																																																																																																																																											8
AACAG/CTGTT	11																																																																																																																																																																																																																																																																					11
AACAT/ATGTT	1																																																																																																																																																																																																																																																																					1
AACCC/GGGTT	24	5																																																																																																																																																																																																																																																																				29
AACCG/CGGTT	1																																																																																																																																																																																																																																																																					1
AACGC/CGTTG	4																																																																																																																																																																																																																																																																					4
AACGG/CCGTT	2																																																																																																																																																																																																																																																																					2
AACTC/AGTTG	2																																																																																																																																																																																																																																																																					2
AACTG/AGTTC	2																																																																																																																																																																																																																																																																					2
AAGAC/CTTGT	3																																																																																																																																																																																																																																																																					3
AAGAG/CTCTT	7																																																																																																																																																																																																																																																																					7
AAGAT/ATCTT	19	1	1									1																																																																																																																																																																																																																																																										22
AAGCC/CTTGG	10	1																				1	1		1																																																																																																																																																																																																																																													14
AAGCG/CGCTT	1																																																																																																																																																																																																																																																																					1
AAGCT/AGCTT	1																																																																																																																																																																																																																																																																					1
AAGGC/CCTTG	41	4	2				1																																																																																																																																																																																																																																																															48
AAGGG/CCCTT	12																																																																																																																																																																																																																																																																					12
AAGTC/ACTTG	244	125	22	11	5	1			1				1																																																																																																																																																																																																																																																									410
AAGTG/ACTTC	1		1																																																																																																																																																																																																																																																																			2
AATAG/ATTCT	1																																																																																																																																																																																																																																																																					1
AATCC/ATTGG	1																																																																																																																																																																																																																																																																					1
AATGC/ATTGC	9	1																																																																																																																																																																																																																																																																				10
AATGG/ATTCC	2																																																																																																																																																																																																																																																																					2
AATGT/ACATT	1		1																																																																																																																																																																																																																																																																			2
AATTC/AATTG	1																																																																																																																																																																																																																																																																					1
ACACC/GGTGT	20	2			1																																																																																																																																																																																																																																																																	23
ACACT/AGTGT	1						1																																																																																																																																																																																																																																																															2
ACAGC/CTGTG	168	49	21	7	11	6	1	1		1					1					1																																																																																																																																																																																																																																																		267
ACAGG/CCTGT	8	1	1																																																																																																																																																																																																																																																																			10
ACAGT/ACTGT	1																																																																																																																																																																																																																																																																					1
ACATC/ATGTG	3	1	1		1																																																																																																																																																																																																																																																																	6
ACCAG/CTGGT	3	1																																																																																																																																																																																																																																																																				4
ACCAT/ATGGT	1																																																																																																																																																																																																																																																																					1
ACCCC/GGGGT	385	103	32	2	2		1																																																																																																																																																																																																																																																															525
ACCCT/AGGGT	3																																																																																																																																																																																																																																																																					3
ACCGC/CGGTG	12	2		1																																																																																																																																																																																																																																																																		15
ACCTC/AGGTG	4																																																																																																																																																																																																																																																																					4
ACCTG/AGGTC	2																																																																																																																																																																																																																																																																					2
ACGCC/CGTGG	41	2																																																																																																																																																																																																																																																																				43
ACGGC/CCGTG	25	3		1		1	1																																																																																																																																																																																																																																																															31
ACGGG/CCCGT	1																																																																																																																																																																																																																																																																					1
ACGTC/ACGTG	1																																																																																																																																																																																																																																																																					1
ACTAG/AGTCT	45	20	4			1										1		1													1																																																																																																																																																																																																																																							73
ACTCC/AGTGG	3																																																																																																																																																																																																																																																																					3
ACTCG/AGTCG	2	1																																																																																																																																																																																																																																																																				3
ACTGC/AGTGC	53	5	1	1																																																																																																																																																																																																																																																																		60
ACTGG/AGTCC	3	2																																																																																																																																																																																																																																																																				5
AGAGC/CTCTG	61	5	1		1																												1																																																																																																																																																																																																																																					69
AGAGG/CCTCT	22	1																																																																																																																																																																																																																																																																				23
AGATC/ATCTG	2																																																																																																																																																																																																																																																																					2
AGCAT/ATGCT	3		1											1			1							1										1																																																																																																																																																																																																																																				8
AGCCC/CTGGG	133	18	3	5	1		1																																																																																																																																																																																																																																																															161
AGCCG/CGGCT	6		1																																																																																																																																																																																																																																																																			7
AGCCT/AGGCT	2																																																																																																																																																																																																																																																																					2
AGCGC/CGCTG	283	25	3	2	2																																																																																																																																																																																																																																																																	315
AGCGG/CCGCT	6	2																																																																																																																																																																																																																																																																				8
AGCTC/AGCTG	12		1																																																																																																																																																																																																																																																																			13
AGGAT/ATCCT	1																																																																																																																																																																																																																																																																					1
AGGCC/CCTGG	47	6		1	2																																																																																																																																																																																																																																																																	56
AGGCG/CCTCG	20					1																																																																																																																																																																																																																																																																21
AGGGC/CCCTG	572	99	34	14	8		2						1	1	1																																																																																																																																																																																																																																																							732
AGGGG/CCCCT	157	16	2		3	3				1																																																																																																																																																																																																																																																												182
ATCCC/ATGGG	9																																																	1																																																																																																																																																																																																																				10
ATGCC/ATGGC	54	13	6		1																																																																																																																																																																																																																																																																	74
CCCCG/CGGGG	127	16	6	3																																																																																																																																																																																																																																																																		152
CCCGG/CCGGG	26	1		1																																																																																																																																																																																																																																																																		28
CCGCG/CGCGG	100	5																																																																																																																																																																																																																																																																				105
AAAAAC/GTTTTT	3	1																																1																																																																																																																																																																																																																																				5
AAAAAT/ATTTTT	1	1									1																						1																																																																																																																																																																																																																																					4
AAAACG/CGTTTT	1																																																																																																																																																																																																																																																																					1
AAAAGC/CTTTTG	1																																																																																																																																																																																																																																																																					1
AAACAC/GTGTTT	2		1							1																																																																																																																																																																																																																																																												4
AAACCC/GGGTTT			1																																																																																																																																																																																																																																																																			1
AAAGAG/CTCTTT	1																																																																																																																																																																																																																																																																					1
AAAGGC/CCTTTG	1																																																																																																																																																																																																																																																																					1
AAAGGT/ACCTTT	80	25						1																																																																																																																																																																																																																																																														106
AAAGTC/ACTTTG		5																																																																																																																																																																																																																																																																				5
AAAGTG/ACTTTC	1																																																																																																																																																																																																																																																																					1
AACACC/GGTGTT	3																																																																																																																																																																																																																																																																					3
AACAGC/CTGTTG	3	1																																																																																																																																																																																																																																																																				4
AACATT/AATGTT	1																																																																																																																																																																																																																																																																					1
AACCAC/GGTTGT		1																																																																																																																																																																																																																																																																				1
AACCAT/ATGGTT	1																																																																																																																																																																																																																																																																					1
AACCCC/GGGGTT	10	1	1	2	1		1													1																																																																																																																																																																																																																																																		17
AACCCT/AGGGTT	2																																																																																																																																																																																																																																																																					2
AACGCC/CGTTGG		1																																																																																																																																																																																																																																																																				1
AACGGC/CCGTTG	6																																																																																																																																																																																																																																																																					6
AAGAGC/CTCTTG	1																																																																																																																																																																																																																																																																					1
AAGAGG/CCTCTT	2	1																																																																																																																																																																																																																																																																				3
AAGATG/ATCTTC	2																																																																																																																																																																																																																																																																					2
AAGCAC/CTTGTG						1																																																																																																																																																																																																																																																																1
AAGCAG/CTGCTT	4	1																																																																																																																																																																																																																																																																				5
AAGCCC/CTTGGG	7	3																																																																																																																																																																																																																																																																				10
AAGCCG/CGGCTT	1																																																																																																																																																																																																																																																																					1
AAGCGC/CGCTTG	2																																																																																																																																																																																																																																																																					2
AAGCGG/CCGCTT	1																																																																																																																																																																																																																																																																					1
AAGCGT/ACGCTT	1																																																																																																																																																																																																																																																																					1
AAGGAC/CCTTGT	2																																																																																																																																																																																																																																																																					2
AAGGAG/CCTTCT	5																																																																																																																																																																																																																																																																					5
AAGGCC/CCTTGG	5	1																																																																																																																																																																																																																																																																				6
AAGGGC/CCCTTG	12	3	1		1																																																																																																																																																																																																																																																																	17
AAGGGG/CCCCTT	1	1																																																																																																																																																																																																																																																																				2
AAGTGC/ACTTGC	1																																																																																																																																																																																																																																																																					1
AATAGT/ACTATT	1																																																																																																																																																																																																																																																																					1
AATGCC/ATTGGC	1						1																																																																																																																																																																																																																																																															2
AATGGC/ATTGCC				1																																																																																																																																																																																																																																																																		1
ACACAG/CTGTGT	1					1																																																																																																																																																																																																																																																																2
ACACCC/GGGTGT	9	3	2			1																																																																																																																																																																																																																																																																15
ACACCG/CGGTGT	1																																																																																																																																																																																																																																																																					1
ACACGC/CGTGTG	2																	1																																																																																																																																																																																																																																																				3
ACACTC/AGTGTG	1		1																																																																																																																																																																																																																																																																			2
ACACTG/AGTGTC	1																																																																																																																																																																																																																																																																					1
ACAGCC/CTGTGG	9																																																																																																																																																																																																																																																																					9
ACAGCG/CGCTGT	15		1																																																																																																																																																																																																																																																																			16
ACAGGC/CCTGTG	5																																																																																																																																																																																																																																																																					5
ACAGGG/CCCTGT	3																																																																																																																																																																																																																																																																					3
ACAGTC/ACTGTG	4																																																																																																																																																																																																																																																																					4
ACATCC/ATGTGG	1	1																																																																																																																																																																																																																																																																				2
ACATGC/ATGTGC	5																																																																																																																																																																																																																																																																					5
ACATGG/ATGTCC	1																																																																																																																																																																																																																																																																					1
ACCACG/CGTGGT	1																																																																																																																																																																																																																																																																					1
ACCACT/AGTGGT	1																																																																																																																																																																																																																																																																					1
ACCAGC/CTGGTG	26	10	1				1																																																																																																																																																																																																																																																															38
ACCAGG/CCTGGT	2																																																																																																																																																																																																																																																																					2
ACCCCC/GGGGGT	120	28	2	2																																																																																																																																																																																																																																																																		152
ACCCGC/CGGGTG	6																																																																																																																																																																																																																																																																					6
ACCCTC/AGGGTG	1																																																																																																																																																																																																																																																																					1
ACCCTG/AGGGTC	2																																																																																																																																																																																																																																																																					2
ACCGCC/CGGTGG	44	3	3																																																																																																																																																																																																																																																																			50
ACCGCG/CGCGGT	2																																																																																																																																																																																																																																																																					2
ACCGGC/CCGGTG	4																																																																																																																																																																																																																																																																					4
ACCTCC/AGGTGG	7																																																																																																																																																																																																																																																																					7
ACCTCG/AGGTCG	1																																																																																																																																																																																																																																																																					1
ACCTGC/AGGTGC	12		1																																																																																																																																																																																																																																																																			13
ACCTGG/AGGTCC	2	1																																																																																																																																																																																																																																																																				3
ACGAGC/CGTGCT	1	1																																																																																																																																																																																																																																																																				2
ACGAGG/CCTCGT	6																																																																																																																																																																																																																																																																					6
ACGCAG/CGTCTG		1										1																																																																																																																																																																																																																																																										2
ACGCCC/CGTGGG	1																																																																																																																																																																																																																																																																					1
ACGCGC/CGCGTG	2																																																																																																																																																																																																																																																																					2
ACGCTC/AGCGTG	2																																																																																																																																																																																																																																																																					2
ACGGCG/CCGTCG	1																																																																																																																																																																																																																																																																					1
ACGGCT/AGCCGT	2																																																																																																																																																																																																																																																																					2
ACGGGC/CCCGTG	3																																																																																																																																																																																																																																																																					3
ACGGGG/CCCCGT	1																																																																																																																																																																																																																																																																					1
ACGTCC/ACGTGG	1																																																																																																																																																																																																																																																																					1
ACGTGC/ACGTGC	1																																																																																																																																																																																																																																																																					1
ACTATC/AGTGAT	1																																																																																																																																																																																																																																																																					1
ACTCCC/AGTGGG	2																																																																																																																																																																																																																																																																					2
ACTCTC/AGAGTG	1																																																																																																																																																																																																																																																																					1
ACTGCC/AGTGGC	8	1																																																																																																																																																																																																																																																																				9
ACTGCG/AGTCGC	1																																																																																																																																																																																																																																																																					1
ACTGGC/AGTGCC	2																																																																																																																																																																																																																																																																					2
ACTGGG/AGTCCC	2																																																																																																																																																																																																																																																																					2
AGAGCC/CTCTGG	5																																																																																																																																																																																																																																																																					5
AGAGCG/CGCTCT	1																																																																																																																																																																																																																																																																					1
AGAGCT/AGCTCT	1																																																																																																																																																																																																																																																																					1
AGAGGC/CCTCTG	36	6	1																																																																																																																																																																																																																																																																			43
AGAGGG/CCCTCT	9																																																																																																																																																																																																																																																																					9
AGATGC/ATCTGC		1																																																																																																																																																																																																																																																																				1
AGATGG/ATCTCC	1																																																																																																																																																																																																																																																																					1
AGCAGG/CCTGCT	46	2	1																																																																																																																																																																																																																																																																			49
AGCATC/ATGCTG	5																																																																																																																																																																																																																																																																					5
AGCATG/ATGCTC	2																																																																																																																																																																																																																																																																					2
AGCCCC/CTGGGG	21	3																																																																																																																																																																																																																																																																				24
AGCCCG/CGGGCT	2																																																																																																																																																																																																																																																																					2
AGCCGC/CGGCTG	105	17	2	2				1																																																																																																																																																																																																																																																														127
AGCCGG/CCGGCT	4																																																																																																																																																																																																																																																																					4
AGCCTC/AGGCTG	3																																																																																																																																																																																																																																																																					3
AGCCTG/AGGCTC	6																																																																																																																																																																																																																																																																					6
AGCGCC/CGCTGG	43																																																																																																																																																																																																																																																																					43
AGCGCG/CGCGCT		1																																																																																																																																																																																																																																																																				1
AGCGCT/AGCGCT	1																																																																																																																																																																																																																																																																					1
AGCGGC/CCGCTG	298	37	6	3	3	1		1																																																																																																																																																																																																																																																														349
AGCGGG/CCCGCT	12	2	2																																																																																																																																																																																																																																																																			16
AGCTCC/AGCTGG	6																																																																																																																																																																																																																																																																					6
AGCTGC/AGCTGC	23																																																																																																																																																																																																																																																																					23
AGGATC/ATCCTG	1																																																																																																																																																																																																																																																																					1
AGGATG/ATCCTC	1																																																																																																																																																																																																																																																																					1
AGGCCC/CCTGGG	7	1																																																																																																																																																																																																																																																																				8
AGGCCG/CCTCGG	3																																																																																																																																																																																																																																																																					3
AGGCGC/CCTGCG	52	3																																																																																																																																																																																																																																																																				55
AGGCGG/CCGCCT	12	1																																																																																																																																																																																																																																																																				13
AGGGCC/CCCTGG	13				1																																																																																																																																																																																																																																																																	14
AGGGCG/CCCTCG	44	4	1	1																																																																																																																																																																																																																																																																		50
AGGGGC/CCCCTG	74	17	1						1																																																																																																																																																																																																																																																													93
AGGGGG/CCCCCT	32	1	1	1																																																																																																																																																																																																																																																																		35
ATCCCC/ATGGGG	2																																																																																																																																																																																																																																																																					2
ATCGCC/ATGGCG	1																																																																																																																																																																																																																																																																					1
ATCGGC/ATGCCG					1																																																																																																																																																																																																																																																																	1
ATGCCC/ATGGGC	8	1	1																																																																																																																																																																																																																																																																			10
ATGGCC/ATGGCC	1																																																																																																																																																																																																																																																																					1
CCCCCG/CGGGGG	25	5	1	1	1																																																																																																																																																																																																																																																																	33
CCCCGG/CCGGGG	3																																																																																																																																																																																																																																																																					3
CCCGCG/CGCGGG	14	1	1																																																																																																																																																																																																																																																																			16
CCCGGG/CCCGGG	3																																																																																																																																																																																																																																																																					3
CCGCGG/CCGCGG	18																																																																																																																																																																																																																																																																					18
CCGGCG/CCGGCG	62	3																																																																																																																																																																																																																																																																				65
