Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-32/megassr/results/hub_GCA_042257735.1/fasta/hub_GCA_042257735.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              155
Total size of examined sequences (bp):           39575170
Total number of identified SSRs:                 5587
Number of SSR containing sequences:              145
Number of sequences containing more than 1 SSR:  139
Number of SSRs present in compound formation:    301


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	229
2	855
3	1668
4	276
5	1212
6	1347

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	13	7	12	12	9	7	5	3	1	5	4	3	2	2	2	1	1	1	1		2	1					1																	105
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	1	2		1	1		1																																					8
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	4	2	1	2									1							1																								14
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	13	10	14	8	2	4	1	5	6	5	2	1	1	2		1	1		2		1	2	2		1									1	1								1	102
AC	-	-	-	24	15	8	5	3	2			1																																																		58
AG	-	-	-	53	41	18	11	4	3	1		1			2																																															134
AT	-	-	-	21	12	8	9	4	2				1																																																	57
CA	-	-	-	44	12	7	7	4	3	2	3	1		2																																																85
CG	-	-	-	3																																																										3
CT	-	-	-	52	17	17	4	3	3	1		2					1																																													100
GA	-	-	-	58	23	16	9				3			1		1	1																																													112
GC	-	-	-	8	1																																																									9
GT	-	-	-	21	5	5	7	3	1	1	1	2	1																																																	47
TA	-	-	-	25	7	5	2		1	1							1																																													42
TC	-	-	-	53	18	22	6	5	4	3	3	1		1	1	1																		1																												119
TG	-	-	-	42	17	9	5	5	3	2			2	2		1	1																																													89
AAC	-	-	14		1	3	2																																																							20
AAG	-	-	36	11	1	1																																																								49
AAT	-	-	6	2	1	2																																																								11
ACA	-	-	9	8	3	2	4	1														1																																								28
ACC	-	-	12	1	3		1																																																							17
ACG	-	-	20	8		1																																																								29
ACT	-	-	1																																																											1
AGA	-	-	11	6	3	1																		1																																						22
AGC	-	-	20	8	9	2	1																																																							40
AGG	-	-	11	3	1																																																									15
AGT	-	-	1																																																											1
ATA	-	-	23	12	8		1	1																																																						45
ATC	-	-	2																																																											2
ATG	-	-	2	1				1																																																						4
ATT	-	-	7	3										1	1																																															12
CAA	-	-	12	6	4	2	2	1		1		1																																																		29
CAC	-	-	16	4				1																																																						21
CAG	-	-	68	35	12	7	7	4	2	1																																																				136
CAT	-	-	1		2	1																																																								4
CCA	-	-	15	5	1	1																																																								22
CCG	-	-	17	3	4	1	1																																																							26
CCT	-	-	12	2	3	1		1																																																						19
CGA	-	-	20	6	1	1	2																																																							30
CGC	-	-	10	5	2																																																									17
CGG	-	-	23	4	2																																																									29
CGT	-	-	8	3	2	2																																																								15
CTC	-	-	12	2				1																																																						15
CTG	-	-	43	13	5	4																																																								65
CTT	-	-	32	7	1	1	1																																																							42
GAA	-	-	8	7	1			1																																																						17
GAC	-	-	38	9	5	1																																																								53
GAG	-	-	26	10	2		2																																																							40
GAT	-	-	4	1	1																																																									6
GCA	-	-	41	18	4	1	1	1		1																																																				67
GCC	-	-	28	9	2																																																									39
GCG	-	-	15	4	1	1		1																																																						22
GCT	-	-	30	14	9	3	1																																																							57
GGA	-	-	10	8			2																																																							20
GGC	-	-	30	7	1	2	1																																																							41
GGT	-	-	14	6		1																																																								21
GTA	-	-	1	1	1																																																									3
GTC	-	-	30	8	2	1																																																								41
GTG	-	-	13	5		1	1																																																							20
GTT	-	-	11	11	3	7	3	3	1							1							1	1																																						42
TAA	-	-	4	7	2																																																									13
TAC	-	-	4	5	1			1																																																						11
TAG	-	-	1	1	2					1			1																																																	6
TAT	-	-	9	8	2	3	1																																																							23
TCA	-	-	4	1				1																																																						6
TCC	-	-	22	5	4	3	3		1																																																					38
TCG	-	-	31	8	1	1																																																								41
TCT	-	-	19	1	2	1			1																																																					24
TGA	-	-	3	1		1																																																								5
TGC	-	-	53	30	9	7	2																																																							101
TGG	-	-	13	5	2	1																																																								21
TGT	-	-	10	7	5	2	1	1		2				1																																																29
TTA	-	-	10	9	5	2			1		1																																																			28
TTC	-	-	23	8	2						1							1		1																																										36
TTG	-	-	14	4	2	2	3	1	3	1	1																																																			31
AAAC	-	4	1	1																																																										6
AAAG	-	18	5	1	1																																																									25
AAAT	-	3	1	1																																																										5
AACA	-	5																																																												5
AAGA	-	6																																																												6
AAGG	-	1	1																																																											2
AATG	-	1																																																												1
AATT	-	1			1																																																									2
ACAA	-	1				1																																																								2
ACAG	-	2																																																												2
ACCG	-		1																																																											1
ACGA	-	1																																																												1
AGAA	-	7	2																																																											9
AGAC	-	5																																																												5
AGCA	-	2																																																												2
AGCC	-	2																																																												2
AGCG	-		1																																																											1
AGGA	-		1																																																											1
AGGC	-					1																																																								1
AGGT	-	1																																																												1
AGTG	-	1																																																												1
ATAA	-	1	1																																																											2
ATAC	-	1																																																												1
ATAG	-	1																																																												1
ATCC	-	1																																																												1
ATGA	-	1																																																												1
ATGG	-	1																																																												1
ATGT	-		1																																																											1
ATTT	-	4																																																												4
CAAA	-	2		1																																																										3
CAAG	-	1																																																												1
CAAT	-	2																																																												2
CACC	-	2																																																												2
CAGA	-	1							1																																																					2
CAGC	-	1		1																																																										2
CAGG	-		1																																																											1
CATT	-		1																																																											1
CCAC	-	1																																																												1
CCCT	-	1	1																																																											2
CCGC	-	1																																																												1
CCGG	-	2																																																												2
CCGT	-	1																																																												1
CCTA	-	1																																																												1
CGAA	-	1																																																												1
CGCC	-	1																																																												1
CGCT	-	1																																																												1
CGGA	-	1																																																												1
CTCA	-	1																																																												1
CTCC	-	3																																																												3
CTGG	-	1																																																												1
CTTC	-	1	1																																																											2
CTTT	-	5	2																																																											7
GAAA	-	3																																																												3
GAAC	-	1																																																												1
GAAG	-	4	1																																																											5
GACA	-	1	1	1																																																										3
GAGC	-	1																																																												1
GAGG	-	1																																																												1
GATT	-				1																																																									1
GCAA	-	1																																																												1
GCCA	-	2	1																																																											3
GCCG	-	1																																																												1
GCGT	-	1																																																												1
GCTG	-		1																																																											1
GGAA	-	1																																																												1
GGAG	-	1	1																																																											2
GGAT	-	2																																																												2
GGCA	-	1																																																												1
GGCC	-	2																																																												2
GGCT	-	1	1																																																											2
GGTA	-	1																																																												1
GGTT	-		1																																																											1
GTAC	-	1																																																												1
GTCA	-	1																																																												1
GTCG	-	1																																																												1
GTGA	-	1																																																												1
GTGC	-	3	1	1																																																										5
GTTT	-	2																																																												2
TAAA	-	2																																																												2
TACA	-	1																																																												1
TACC	-	1																																																												1
TATC	-	1																																																												1
TATG	-	1												1																																																2
TATT	-	4																																																												4
TCAC	-					1																																																								1
TCCA	-	1																																																												1
TCCC	-	1																																																												1
TCCT	-	1																																																												1
TCGC	-	1																																																												1
TCGT	-			1																																																										1
TCTA	-	1																																																												1
TCTG	-			1																																																										1
TCTT	-	6	2																																																											8
TGAT	-		1																																																											1
TGCA	-		1																																																											1
TGGC	-	3																																																												3
TGGG	-	1																																																												1
TGTA	-		1																																																											1
TGTC	-	2																																																												2
TGTT	-	3																																																												3
TTAA	-	1																																																												1
TTAT	-	2																																																												2
TTCC	-	1																																																												1
TTCG	-	1																																																												1
TTCT	-	5	3			1																																																								9
TTGA	-	1																																																												1
TTGC	-			1																																																										1
TTGT	-		2																																																											2
TTTA	-	7																																																												7
TTTC	-	20	6	4				1			1							1																																												33
TTTG	-	1																																																												1
AAAAC	5	2	1																																																											8
AAAAG	44	4	1	1										1																																																51
AAAAT	19	4	1																																																											24
AAACA	10	1	1																																																											12
AAACG	5						1																																																							6
AAACT	1																																																													1
AAAGA	20	3	1	1																																																										25
AAAGC		2																																																												2
AAAGG	2																																																													2
AAAGT	1																																																													1
AAATA	14																																																													14
AAATC	3																																																													3
AAATG	1																																																													1
AACAA	4																																																													4
AACAC	2																																																													2
AACAG	1																																																													1
AACGA	4																																																													4
AACGC	1																																																													1
AACGG	1																																																													1
AACTG	1																																																													1
AAGAA	30	2																																																												32
AAGAC	1			1																																																										2
AAGAG	6																																																													6
AAGCA	3																																																													3
AAGCC	1																																																													1
AAGGA	2	1																																																												3
AAGGC	1																																																													1
AAGGG	1																																																													1
AAGTC	1																																																													1
AATAA	5																																																													5
AATCA	1	1																																																												2
AATGA	1																																																													1
AATTC	2																																																													2
ACAAA	9																																																													9
ACAAC	4	1																																																												5
ACACA	2																																																													2
ACACC	1																																																													1
ACAGA	3																																																													3
ACAGC	1																																																													1
ACAGG	1																																																													1
ACATC	1	1																																																												2
ACCAC	3																																																													3
ACCGA	1																																																													1
ACCGG	1																																																													1
ACGAA	1																																																													1
ACGAC	1			1																																																										2
ACGAG	1																																																													1
ACGGA	1																																																													1
ACTCG	1																																																													1
ACTGG	1																																																													1
ACTGT	1																																																													1
ACTTT	1																																																													1
AGAAA	17	2	1																																																											20
AGAAG	8	1																																																												9
AGACA	4																																																													4
AGACG	1																																																													1
AGAGA	3	1																																																												4
AGAGG	1																																																													1
AGATC	1																																																													1
AGATG	1																																																													1
AGCAA	1		1																																																											2
AGCAC	2																																																													2
AGCAG	1																																																													1
AGCTC	1																																																													1
AGCTG	1																																																													1
AGGAA	1																																																													1
AGGAC		1																																																												1
AGGAG	2																																																													2
AGGAT	1																																																													1
AGGCA	1																																																													1
AGGCC	4																																																													4
AGGGA	1																																																													1
AGGGG	1																																																													1
AGTAA	1																																																													1
AGTCC	1	1																																																												2
AGTCG	1																																																													1
ATAAA	19				1					1																																																				21
ATACG	1																																																													1
ATAGA	2																																																													2
ATATA	1																																																													1
ATCAA	2																																																													2
ATCAC	2																																																													2
ATCAG	1																																																													1
ATCGC	1																																																													1
ATGAA	1																																																													1
ATGAC	1																																																													1
ATGAG	2	1																																																												3
ATGCC	1																																																													1
ATGCG	1	1																																																												2
ATGGG	2																																																													2
ATTAT	1																																																													1
ATTCA	1																																																													1
ATTGC	1																																																													1
ATTGT			1																																																											1
ATTTC	1																																																													1
ATTTG		1																																																												1
ATTTT	7	1																																																												8
CAAAA	7	1																																																												8
CAAAT	2																																																													2
CAACG	1	1																																																												2
CAACT	3																																																													3
CAAGA	3																																																													3
CAAGG	1																																																													1
CAAGT	1																																																													1
CAATG	1																																																													1
CAATT		1																																																												1
CACAA	2																																																													2
CACAC	2																																																													2
CACCA	1																																																													1
CACCT	1																																																													1
CACGA	1																																																													1
CACGC	1																																																													1
CACTC	1																																																													1
CACTG	1																																																													1
CAGAA	1																																																													1
CAGAC	1																																																													1
CAGAG	2																																																													2
CAGCA	1																																																													1
CAGCC	2																																																													2
CAGCG	1																																																													1
CAGCT	1																																																													1
CAGGA	1																																																													1
CAGGC	3																																																													3
CAGGG	1																																																													1
CATCA	1																																																													1
CATCC	2	2																																																												4
CATCG	4																																																													4
CATTG	1																																																													1
CCAAG	1																																																													1
CCACA	1																																																													1
CCACC	1																																																													1
CCAGA	2																																																													2
CCAGC	2																																																													2
CCAGG	3	2																																																												5
CCAGT	2																																																													2
CCCCT	1	1																																																												2
CCCTC	1																																																													1
CCCTG	1							1																																																						2
CCGGC	1																																																													1
CCTCC	2																																																													2
CCTCT	5	1																																																												6
CCTGA	1																																																													1
CCTGG	2																																																													2
CCTGT	1																																																													1
CCTTC	2																																																													2
CCTTG	2																																																													2
CCTTT	4																																																													4
CGAAC	2																																																													2
CGAAG	1																																																													1
CGACA	2																																																													2
CGAGG	3																																																													3
CGATG	1																																																													1
CGCAG	1																																																													1
CGCAT	1	1																																																												2
CGCCT	1																																																													1
CGCGT	1																																																													1
CGCTC	1																																																													1
CGCTT	1																																																													1
CGTAT	1																																																													1
CGTGT	1																																																													1
CGTTT	2																																																													2
CTCAA	1																																																													1
CTCAC	1	1																																																												2
CTCAG	1																																																													1
CTCAT	2																																																													2
CTCCA	1																																																													1
CTCCC	1																																																													1
CTCGA	1	1																																																												2
CTCGC	2	1																																																												3
CTCGT	1																																																													1
CTCTC	6	1																																																												7
CTCTT	5	1																																																												6
CTGGA	1																																																													1
CTGGC	2	2																																																												4
CTGGG	1																																																													1
CTGGT	3																																																													3
CTGTG	1																																																													1
CTGTT	1																																																													1
CTTAT	1																																																													1
CTTCT	4																																																													4
CTTGC		1																																																												1
CTTGG	1																																																													1
CTTGT	1																																																													1
CTTTA	2																																																													2
CTTTC	9																																																													9
CTTTT	22	3		1		1						1																																																		28
GAAAA	22	4	1																																																											27
GAAAC	4	2																																																												6
GAAAG	3																																																													3
GAAGA	6	1																																																												7
GAAGC	1																																																													1
GAAGG	2	1																																																												3
GAAGT	2																																																													2
GAATA	1																																																													1
GACAA	1																																																													1
GACAC	3																																																													3
GACAG	1	1																																																												2
GACAT	1																																																													1
GACCA	2	1																																																												3
GACGA	1																																																													1
GACGC	1																																																													1
GACGT	1																																																													1
GAGAC									1																																																					1
GAGAG	3																																																													3
GAGAT	3																																																													3
GAGGA	4																																																													4
GAGGG	1																																																													1
GAGGT	1																																																													1
GAGTC	2																																																													2
GATAC	1																																																													1
GATGA	1																																																													1
GATGG	2																																																													2
GATGT					1																																																									1
GATTA	1																																																													1
GATTT	1																																																													1
GCAAG	1																																																													1
GCAGC	2																																																													2
GCATC	1	1																																																												2
GCATG	1																																																													1
GCATT	1																																																													1
GCCAA	2																																																													2
GCCAC	1																																																													1
GCCAG	1																																																													1
GCCCA	3																																																													3
GCCGT	1																																																													1
GCCTC	1																																																													1
GCCTG	5																																																													5
GCCTT	1																																																													1
GCGAG		1																																																												1
GCGAT	1	1																																																												2
GCGCG	1																																																													1
GCTCT	1																																																													1
GCTTC	1																																																													1
GCTTT	2																																																													2
GGAAA	2																																																													2
GGAAC	1																																																													1
GGAAG	2																																																													2
GGACA	2																																																													2
GGAGA	2																																																													2
GGAGG	2																																																													2
GGATG	1																																																													1
GGATT	1																																																													1
GGCAA	2																																																													2
GGCAC		1																																																												1
GGCAG	2																																																													2
GGCAT	1																																																													1
GGCCA	13	2																																																												15
GGCCT	9																																																													9
GGCGA	2																																																													2
GGCGC	1																																																													1
GGCTG	2																																																													2
GGCTT	1																																																													1
GGGAA	2																																																													2
GGGAG	1																																																													1
GGGCT	1																																																													1
GGGGA	1	1																																																												2
GGGGC	1																																																													1
GGTAA	1																																																													1
GGTAT	2	1																																																												3
GGTCT	1																																																													1
GGTGA	1																																																													1
GGTGT	1																																																													1
GGTTG	1																																																													1
GTAGA	1																																																													1
GTAGC	1																																																													1
GTAGT	1																																																													1
GTATG	2																																																													2
GTCCA	1	2																																																												3
GTCGA	2	1																																																												3
GTCGC	1																																																													1
GTCTC	1																																																													1
GTCTG	2																																																													2
GTCTT	1																																																													1
GTGAC	1																																																													1
GTGAG	2																																																													2
GTGAT	1	2																																																												3
GTGCA	1																																																													1
GTGGT	2	1																																																												3
GTGTA		1																																																												1
GTGTT	1																																																													1
GTTAT	1																																																													1
GTTGA	1																																																													1
GTTGC	3																																																													3
GTTGT	2																																																													2
GTTTC	4	1																																																												5
GTTTG	1																																																													1
GTTTT	7	1																																																												8
TAAAA	10	1																																																												11
TAACA	3																																																													3
TAAGA	1																																																													1
TAATC	1																																																													1
TAATT			1																																																											1
TACAA	1																																																													1
TACCC	1																																																													1
TAGAG	1																																																													1
TATAG	1																																																													1
TATCC	1																																																													1
TATCG	1																																																													1
TATTT	8																																																													8
TCAAA	1																																																													1
TCAAC	1																																																													1
TCAAG	1																																																													1
TCACC	1																																																													1
TCATC		1	1																																																											2
TCATT	1																																																													1
TCCAC	1																																																													1
TCCAG	2																																																													2
TCCTC	3	1																																																												4
TCCTG		1																																																												1
TCCTT	4																																																													4
TCGAC	1																																																													1
TCGAT	2																																																													2
TCGCA		2																																																												2
TCGCC	1																																																													1
TCGCT	1																																																													1
TCGTC	2																																																													2
TCGTG	2																																																													2
TCGTT	2																																																													2
TCTCA	4	1																																																												5
TCTCC	4																																																													4
TCTCG	1																																																													1
TCTCT	7	1																																																												8
TCTGA	1																																																													1
TCTTC	6	2																																																												8
TCTTG	2																																																													2
TCTTT	21																																																													21
TGAAA	2																																																													2
TGACG	1																																																													1
TGACT	1																																																													1
TGATG	1																																																													1
TGATT	1																																																													1
TGCAA	1																																																													1
TGCAC	1																																																													1
TGCAG	1																																																													1
TGCAT		1																																																												1
TGCGA	1		1																																																											2
TGCTA	1																																																													1
TGCTC	2																																																													2
TGGAA	1																																																													1
TGGCC	5	5																																																												10
TGGCG	1																																																													1
TGGTC	1	1																																																												2
TGTCC	1																																																													1
TGTCG	1																																																													1
TGTGA	2																																																													2
TGTGC	3																																																													3
TGTGT	1																																																													1
TGTTC	2																																																													2
TGTTT	7	3																																																												10
TTAAA	1																																																													1
TTAGT		1																																																												1
TTATA		1																																																												1
TTATT	10																																																													10
TTCAT	1																																																													1
TTCCT	5																																																													5
TTCGA	1																																																													1
TTCGC	1																																																													1
TTCGT	3																																																													3
TTCTC	6	1																																																												7
TTCTG	2	1								1																																																				4
TTCTT	21	2	1																																																											24
TTGAC	1																																																													1
TTGCC	4																																																													4
TTGCG	1	1																																																												2
TTGCT	1																																																													1
TTGGA	1																																																													1
TTGTA		1																																																												1
TTGTC	2																																																													2
TTGTT	4		2																																																											6
TTTAA	1																																																													1
TTTAT	13	3																																																												16
TTTCA	1																																																													1
TTTCC	3																																																													3
TTTCG	4																																																													4
TTTCT	28	3	1																																																											32
TTTGA	1																																																													1
TTTGC	5																																																													5
TTTGG	2																																																													2
TTTGT	7	2	1																																																											10
TTTTA	19	4																																																												23
TTTTC	41	10	1																																																											52
TTTTG	11	1	1																																																											13
AAAAAC	3																																																													3
AAAAAG	5	1					1																																																							7
AAAAAT	4	1																																																												5
AAAACA	3	1																																																												4
AAAACC	1	1																																																												2
AAAAGA	9			1																																																										10
AAAAGC	1	1																																																												2
AAAAGG	1																																																													1
AAAATA	3		1																																																											4
AAAATC	2	1																																																												3
AAAATG		1																																																												1
AAACAA	2																																																													2
AAACAG	1		1																																																											2
AAACGC										1																																																				1
AAAGAA	8																																																													8
AAAGCC								1																																																						1
AAAGGA	1																																																													1
AAAGGC	1																																																													1
AAATAA	5	1	1	1																																																										8
AAATAC	1																																																													1
AAATAG	1																																																													1
AAATCA		1																																																												1
AAATCG		1																																																												1
AAATGC	2																																																													2
AACAAA	1																																																													1
AACAAT	1																																																													1
AACACC	1																																																													1
AACACT										1																																																				1
AACAGA	1																																																													1
AACAGC	3																																																													3
AACATC	1																																																													1
AACATG	2																																																													2
AACGCA		1																																																												1
AACGGA	1																																																													1
AACGGC	1	2																																																												3
AACGTC	1																																																													1
AACTCG	1																																																													1
AAGAAA	6	2																																																												8
AAGAGC	1																																																													1
AAGAGG		1																																																												1
AAGCAA	1	1																																																												2
AAGCGG	1																																																													1
AAGGAC	1																																																													1
AAGGAG	2																																																													2
AAGGCA			1																																																											1
AAGGCT	1																																																													1
AAGGGA	2																																																													2
AAGGGC	2																																																													2
AAGGTT	1																																																													1
AAGTCC	1																																																													1
AAGTGG	1																																																													1
AATAAA	3																																																													3
AATAAC	1																																																													1
AATACA			1																																																											1
AATAGA	1																																																													1
AATCAA	2																																																													2
AATCGA	3																																																													3
AATGAC	1																																																													1
AATGAG	1																																																													1
AATGAT	1																																																													1
AATGCG	1																																																													1
AATGGC	1																																																													1
AATTAA		1																																																												1
AATTAG	1																																																													1
AATTGG	1																																																													1
AATTTT	1																																																													1
ACAACC	1																																																													1
ACAACG	3	1																																																												4
ACAACT	1																																																													1
ACAAGG	2																																																													2
ACACAA	1																																																													1
ACACCC	1																																																													1
ACACCG		1																																																												1
ACACTA										1																																																				1
ACAGAA	1		1																																																											2
ACAGAT	1																																																													1
ACAGCA	1																																																													1
ACAGCT	1																																																													1
ACAGGA	3																																																													3
ACAGGC	1	1																																																												2
ACATCG	2																																																													2
ACCAAG	2																																																													2
ACCACA	1	1																																																												2
ACCAGA	1																																																													1
ACCAGC	1																																																													1
ACCCCG	1																																																													1
ACCGCC	1																																																													1
ACCGCG		1																																																												1
ACCGGC	1																																																													1
ACCTCG	2	1																																																												3
ACGAAA	1																																																													1
ACGACA	1																																																													1
ACGACC	1																																																													1
ACGACT	1																																																													1
ACGAGG	1																																																													1
ACGATG	1																																																													1
ACGCAG				1																																																										1
ACGCAT	1																																																													1
ACGGCA	1																																																													1
ACTAAC				1						1																																																				2
ACTCAC		1																																																												1
ACTGCA	2																																																													2
ACTGCC		1																																																												1
ACTGGG	1																																																													1
ACTTCG	1																																																													1
AGAAAA	8	1																																																												9
AGAAAG	1																																																													1
AGAAAT	1																																																													1
AGAACC	1																																																													1
AGAAGC	1																																																													1
AGAAGG	1	1		1																																																										3
AGACAA	2																																																													2
AGACCA	1	1																																																												2
AGACGA	1																																																													1
AGACTA	1																																																													1
AGAGAA	2																																																													2
AGAGAC	2	1																																																												3
AGAGCA	1																																																													1
AGAGGA	1	1																																																												2
AGAGTA				1																																																										1
AGAGTC	1																																																													1
AGATCA	1																																																													1
AGATCC		1																																																												1
AGATGG	1																																																													1
AGCAAA	2	1																																																												3
AGCAAC		1	1																																																											2
AGCAAG		1																																																												1
AGCCAC	1																																																													1
AGCCGG				1																																																										1
AGCGAG	1																																																													1
AGCGAT	1																																																													1
AGCTCG	1																																																													1
AGCTGG	1																																																													1
AGCTGT	1																																																													1
AGGAAA			1																																																											1
AGGAAG	2																																																													2
AGGACA	1																																																													1
AGGACG	1																																																													1
AGGATG	1																																																													1
AGGCAC	1																																																													1
AGGCGA	1																																																													1
AGGGAG		2																																																												2
AGGGCC	1																																																													1
AGGTCG	2																																																													2
AGGTGT		1																																																												1
AGTATG	1																																																													1
AGTCGC	1	1																																																												2
AGTCGG		1																																																												1
AGTGGC	2																																																													2
AGTGGT	1																																																													1
AGTTTT	1																																																													1
ATAAAA	2	1																																																												3
ATAACG	1																																																													1
ATACAC	1																																																													1
ATATTG	1																																																													1
ATCAAA	2																																																													2
ATCAGA	1																																																													1
ATCCTC	1																																																													1
ATCGGC	1																																																													1
ATGACA	1																																																													1
ATGAGA		1																																																												1
ATGCAA	1																																																													1
ATGCAG	1																																																													1
ATGCCA	2																																																													2
ATGCCC	1																																																													1
ATGGAA	1																																																													1
ATGGAG	1	1																																																												2
ATGGCC	1																																																													1
ATGGTA	1																																																													1
ATGGTC	1																																																													1
ATGTCG	1																																																													1
ATGTTG	1																																																													1
ATTATC		1																																																												1
ATTATG				1																																																										1
ATTCCT	1																																																													1
ATTGTC		1																																																												1
ATTTGG	1																																																													1
ATTTTC			1																																																											1
ATTTTG	2	1																																																												3
ATTTTT	3																																																													3
CAAAAA	3																																																													3
CAAAAG	1	1																																																												2
CAAAAT	1																																																													1
CAAATC	1																																																													1
CAACAG	4	1	1																																																											6
CAACAT	2	1																																																												3
CAACCT	1																																																													1
CAACGC	1			1																																																										2
CAACGT	1																																																													1
CAAGAA		1																																																												1
CAAGCA	1																																																													1
CAAGCT	1																																																													1
CAAGGC	2																																																													2
CAAGTC	1																																																													1
CAATAT	1																																																													1
CACAAC	1																																																													1
CACACC	1																																																													1
CACAGA		1																																																												1
CACAGT	1																																																													1
CACATC		1																																																												1
CACATG	1																																																													1
CACATT		1																																																												1
CACCAA	1																																																													1
CACCAG	2		1																																																											3
CACCCA	1																																																													1
CACCGC	1																																																													1
CACCTT	1																																																													1
CACGAC		1																																																												1
CACGAG	1																																																													1
CACGCA	1																																																													1
CACGGT	1																																																													1
CACTGG	1																																																													1
CACTTG	1																																																													1
CAGAAA	1																																																													1
CAGAAC	1																																																													1
CAGACA	1	1																																																												2
CAGAGC	1																																																													1
CAGATG		1																																																												1
CAGCAA	11	5																																																												16
CAGCCG	1																																																													1
CAGCCT	1	1																																																												2
CAGCGC	1																																																													1
CAGGAC	1																																																													1
CAGGCC	1																																																													1
CAGGGC		1																																																												1
CAGGTT	1																																																													1
CAGTCG	1																																																													1
CAGTCT	2																																																													2
CAGTGG	1																																																													1
CATATA		1																																																												1
CATCAA		1																																																												1
CATCAC	1																																																													1
CATCGA	1																																																													1
CATCGG				1																																																										1
CATCTC		1																																																												1
CATCTT		1																																																												1
CATGCA	1																																																													1
CATGGA	1																																																													1
CATGTC	1																																																													1
CATTCA	1																																																													1
CATTCG	1																																																													1
CATTGC	1																																																													1
CATTTT	2																																																													2
CCAAAA	1																																																													1
CCAAAG	1																																																													1
CCAACA	1																																																													1
CCAACC	1																																																													1
CCAAGC		1																																																												1
CCAAGG	2																																																													2
CCAATC	1																																																													1
CCACAA	1																																																													1
CCACAG	1																																																													1
CCACGA		1																																																												1
CCACTG		1																																																												1
CCAGAA		1																																																												1
CCAGAG	1			1																																																										2
CCAGCA	2																																																													2
CCAGGA	1																																																													1
CCAGTC					1																																																									1
CCAGTG	1																																																													1
CCATAA	1																																																													1
CCATCT	2																																																													2
CCATGT	1																																																													1
CCATTT	1																																																													1
CCCAGC		1																																																												1
CCCCTC	1																																																													1
CCCCTT	1																																																													1
CCCGCC	1																																																													1
CCCTCG				1																																																										1
CCCTGG			1																																																											1
CCCTTT	1																																																													1
CCGAGA	1																																																													1
CCGAGC	1																																																													1
CCGCCA	1																																																													1
CCGCCT	1																																																													1
CCGCTG	1																																																													1
CCGGCA	4																																																													4
CCGGCG	1																																																													1
CCGGCT	1	1	1																																																											3
CCGTAC		1																																																												1
CCGTGG	1																																																													1
CCGTTG	3																																																													3
CCTCCA	1																																																													1
CCTCCG	1																																																													1
CCTCGC	3																																																													3
CCTCGG	1																																																													1
CCTCGT			1																																																											1
CCTCTC	1																																																													1
CCTCTT	1	1																																																												2
CCTGAA	1																																																													1
CCTGGA	1																																																													1
CCTGGC	1																																																													1
CCTGTA	1																																																													1
CCTTCC	1																																																													1
CCTTCT	3																																																													3
CCTTGC	2		1																																																											3
CCTTTC	1																																																													1
CGAAGC	1																																																													1
CGAAGG	1																																																													1
CGACAG	2																																																													2
CGACCA	1																																																													1
CGACGG	1																																																													1
CGACTC	1																																																													1
CGACTT	1																																																													1
CGAGAA	1																																																													1
CGAGGA	4																																																													4
CGAGGC	2																																																													2
CGATGA	1																																																													1
CGCAAC	1	1																																																												2
CGCACA		1																																																												1
CGCAGA	2																																																													2
CGCAGC		1																																																												1
CGCCAA	2																																																													2
CGCCCA	1																																																													1
CGCGGG	1																																																													1
CGCTCG	1																																																													1
CGCTGC	1																																																													1
CGCTTT	1																																																													1
CGGAAT	1																																																													1
CGGAGC	1																																																													1
CGGCAG	6																																																													6
CGGCCA	1																																																													1
CGGCCC	1																																																													1
CGGCTC					1																																																									1
CGGGCT		1																																																												1
CGGGGG	1																																																													1
CGGTAG	1																																																													1
CGGTCA	1	1																																																												2
CGGTCT	1	1																																																												2
CGGTGC	1																																																													1
CGGTGG	2																																																													2
CGTCAA	1																																																													1
CGTCAT		2																																																												2
CGTCCA	1																																																													1
CGTCCT			1																																																											1
CGTCGA	1																																																													1
CGTCGC	1																																																													1
CGTCTC	1																																																													1
CGTCTG	1																																																													1
CGTGAG			1																																																											1
CGTGAT	2																																																													2
CGTGGC			1																																																											1
CGTGGT	1																																																													1
CGTTGA	1																																																													1
CGTTGC		1																																																												1
CGTTGG	1	1																																																												2
CGTTGT	1																																																													1
CGTTTT	2																																																													2
CTAACA										3																																																				3
CTACCT	1																																																													1
CTCACA	1																																																													1
CTCACT	1	1																																																												2
CTCAGC	1																																																													1
CTCAGG	1		1																																																											2
CTCAGT	1																																																													1
CTCATC	1																																																													1
CTCCAA	1																																																													1
CTCCAC				1																																																										1
CTCCAG	2																																																													2
CTCCAT	1																																																													1
CTCCGG	1																																																													1
CTCCGT	1																																																													1
CTCCTT	2																																																													2
CTCGGC	1																																																													1
CTCTCG	1																																																													1
CTCTGC	1																																																													1
CTCTTG	1																																																													1
CTCTTT	2																																																													2
CTGAAA	1																																																													1
CTGAAC	2																																																													2
CTGCAA	2																																																													2
CTGCAC	1																																																													1
CTGCAG	1																																																													1
CTGCCA		1																																																												1
CTGCCG	1																																																													1
CTGCCT	2																																																													2
CTGCGG	1																																																													1
CTGCGT		1																																																												1
CTGCTT	2																																																													2
CTGGAA	2																																																													2
CTGGAC	1																																																													1
CTGGAG	1																																																													1
CTGGCA	1																																																													1
CTGGCC	1																																																													1
CTGGGC	1																																																													1
CTGTAG	1																																																													1
CTGTCA	3																																																													3
CTGTCG	1																																																													1
CTGTCT	2	1																																																												3
CTGTGC	2																																																													2
CTGTGG		1																																																												1
CTGTTG	3			1																																																										4
CTGTTT		1		1																																																										2
CTTCAC	1																																																													1
CTTCCA	1																																																													1
CTTCCT			1																																																											1
CTTCTA	1																																																													1
CTTCTC	1	1																																																												2
CTTCTG	1	1																																																												2
CTTGGA	1																																																													1
CTTGGG	1																																																													1
CTTGTC	2																																																													2
CTTTCA	1																																																													1
CTTTCT	1																																																													1
CTTTTC	2		1																																																											3
CTTTTG	1																																																													1
CTTTTT	3																																																													3
GAAAAA	2	1	1																																																											4
GAAAAG	2																																																													2
GAAACA	1																																																													1
GAAACG	1																																																													1
GAAAGA	1																																																													1
GAAATA		1																																																												1
GAAGAC	1																																																													1
GAAGAG	2																																																													2
GAAGAT	1																																																													1
GAAGCA	2																																																													2
GAAGGA	1																																																													1
GAAGGC	1																																																													1
GAAGGG	1																																																													1
GAAGTG	1																																																													1
GACAAA	1																																																													1
GACAAC	1																																																													1
GACAAT	1																																																													1
GACACC	1																																																													1
GACACT	1																																																													1
GACAGC	3																																																													3
GACCAA	1																																																													1
GACCAC	1																																																													1
GACCCT	2																																																													2
GACCGA	1																																																													1
GACCGG	1																																																													1
GACCTG	1																																																													1
GACCTT			1																																																											1
GACGAA	5																																																													5
GACGAG	5	1	1																																																											7
GACGTC	3																																																													3
GACTGA	1																																																													1
GACTGC	1																																																													1
GACTGT		1																																																												1
GAGAAA	2																																																													2
GAGAAG	1																																																													1
GAGACA	1																																																													1
GAGAGC	1																																																													1
GAGATC	1																																																													1
GAGCAA		1																																																												1
GAGCAG	1																																																													1
GAGCCA	1		1																																																											2
GAGCCG	1	1																																																												2
GAGCCT		1																																																												1
GAGCGA	1																																																													1
GAGCGT	1																																																													1
GAGGAA	2																																																													2
GAGGAC	2				1																																																									3
GAGGCA	1																																																													1
GAGGCC	1																																																													1
GAGGCT			1																																																											1
GAGGGT	2																																																													2
GAGGTG	3																																																													3
GAGGTT	1																																																													1
GAGTCA	1																																																													1
GAGTCC	1																																																													1
GAGTCG	1																																																													1
GAGTGG		1																																																												1
GATCAC			1																																																											1
GATCGT	1																																																													1
GATCTC	1																																																													1
GATGAA	1																																																													1
GATGAC	2																																																													2
GATGCA	1																																																													1
GATGCC	1																																																													1
GATGGA	1																																																													1
GATGTC	1																																																													1
GATTAT	1																																																													1
GATTTC	1																																																													1
GCAACA	1																																																													1
GCAACC	1																																																													1
GCAACG	1																																																													1
GCAAGG	1																																																													1
GCAAGT			1																																																											1
GCAATG	1																																																													1
GCACAA	1	1																																																												2
GCACCA	1				1																																																									2
GCACCG	3																																																													3
GCACCT	1																																																													1
GCACGA	1																																																													1
GCACTG	1																																																													1
GCAGAA	1																																																													1
GCAGAC		1																																																												1
GCAGAG		1																																																												1
GCAGAT	1																																																													1
GCAGCC	3																																																													3
GCAGTC	1																																																													1
GCAGTG	1																																																													1
GCATAT	1																																																													1
GCATCC	1																																																													1
GCATGG	1																																																													1
GCCAAC	4																																																													4
GCCAAT	1																																																													1
GCCACA	1																																																													1
GCCAGA	1																																																													1
GCCAGC	1																																																													1
GCCAGG	1																																																													1
GCCAGT	1																																																													1
GCCCAA	1																																																													1
GCCCAT	1																																																													1
GCCCTC	2																																																													2
GCCGAC	1																																																													1
GCCGCA	1																																																													1
GCCGCT	2																																																													2
GCCGTG	1																																																													1
GCCGTT	2																																																													2
GCCTCC	2																																																													2
GCCTCG	1																																																													1
GCCTGA		1	1																																																											2
GCCTGG	2	1																																																												3
GCGACA	1																																																													1
GCGACG	1																																																													1
GCGCAT	1																																																													1
GCGCCG	1																																																													1
GCGCTG	1																																																													1
GCGGCA	8																																																													8
GCGGGT	1																																																													1
GCGTCT	2																																																													2
GCGTTC	1																																																													1
GCTCAA	1																																																													1
GCTCCC	1																																																													1
GCTCCG	1																																																													1
GCTCCT	1																																																													1
GCTCGA	1																																																													1
GCTCGC	1																																																													1
GCTGAA		1																																																												1
GCTGAG	1	1																																																												2
GCTGCA	1																																																													1
GCTGCC	6																																																													6
GCTGCG	1	1																																																												2
GCTGGA	2	1																																																												3
GCTGGC	1																																																													1
GCTGGT	1	1																																																												2
GCTGTC	1																																																													1
GCTGTG	1																																																													1
GCTGTT	2	1																																																												3
GCTTCA	2																																																													2
GCTTCC		1																																																												1
GCTTCT		1																																																												1
GCTTGG	1																																																													1
GCTTGT	1																																																													1
GCTTTG	1																																																													1
GGAAGT	1																																																													1
GGACGA	3																																																													3
GGAGAC	1																																																													1
GGAGCA	2	1																																																												3
GGAGCC	1																																																													1
GGAGCG	1																																																													1
GGATGG	1																																																													1
GGCAAA	1																																																													1
GGCAAC	1																																																													1
GGCAAG	1																																																													1
GGCACA	1																																																													1
GGCACC	1																																																													1
GGCACG	1																																																													1
GGCAGA	1																																																													1
GGCAGC	2	2																																																												4
GGCATG	1																																																													1
GGCATT	1																																																													1
GGCCAC	1																																																													1
GGCCAG	2																																																													2
GGCCCC	1																																																													1
GGCCGT	3																																																													3
GGCCTG	2																																																													2
GGCCTT	1																																																													1
GGCGAC	1																																																													1
GGCGAG	2	1																																																												3
GGCGGT	2	1																																																												3
GGCTAC	1																																																													1
GGCTCA	2																																																													2
GGCTCG		1																																																												1
GGCTCT	1	1																																																												2
GGCTGC	1																																																													1
GGCTTC	1																																																													1
GGGAAG	1																																																													1
GGGAGA	2																																																													2
GGGCTT	1																																																													1
GGGGAA	1																																																													1
GGGGTC		1	1																																																											2
GGGTCA	1																																																													1
GGGTCT	1																																																													1
GGGTTT	1																																																													1
GGTAAC		1																																																												1
GGTCGT	1																																																													1
GGTGAT		1																																																												1
GGTGCA	1																																																													1
GGTGCT	2																																																													2
GGTGGA	3																																																													3
GGTGGC	1																																																													1
GGTTCA	1																																																													1
GGTTGA	1																																																													1
GGTTGC	1		1																																																											2
GGTTGT	1																																																													1
GTACAA		1																																																												1
GTAGAT	1																																																													1
GTAGTC	1																																																													1
GTATGG	1																																																													1
GTATGT	1	1																																																												2
GTCAAG		1																																																												1
GTCATC	1																																																													1
GTCCCA	2																																																													2
GTCCGA	1																																																													1
GTCCTC	1																																																													1
GTCCTG	1																																																													1
GTCCTT						1																																																								1
GTCGAG	1																																																													1
GTCGCA	2																																																													2
GTCGCC	1																																																													1
GTCGCG	2																																																													2
GTCGCT	1																																																													1
GTCGTA	1																																																													1
GTCGTG	1																																																													1
GTCTAC		1																																																												1
GTCTCG	1																																																													1
GTCTGA	1																																																													1
GTCTGT	1																																																													1
GTGAAA		1																																																												1
GTGAAC	1																																																													1
GTGACA	1																																																													1
GTGCAT	1																																																													1
GTGCCA	1																																																													1
GTGCCT	3																																																													3
GTGGAG	2																																																													2
GTGGCA	2																																																													2
GTGGGT	1																																																													1
GTGGTA		1																																																												1
GTGGTT	2																																																													2
GTGTGC	2																																																													2
GTGTTA										2																																																				2
GTGTTG	1																																																													1
GTGTTT	1																																																													1
GTTACC	1																																																													1
GTTAGT										1																																																				1
GTTATG	1																																																													1
GTTCTC	1																																																													1
GTTCTG	1																																																													1
GTTGAC	1																																																													1
GTTGAG	1																																																													1
GTTGAT	1																																																													1
GTTGCC	3																																																													3
GTTGCG	1																																																													1
GTTGCT	3				1																																																									4
GTTGGT	1																																																													1
GTTGTC	1																																																													1
GTTGTG			1																																																											1
GTTTCC	1																																																													1
GTTTCT	1																																																													1
GTTTGA	1																																																													1
GTTTTG	2																																																													2
GTTTTT	1																																																													1
TAAAAA	1																																																													1
TAAAAT	1																																																													1
TACGCC	3																																																													3
TACTAT	1																																																													1
TAGTAA	1																																																													1
TATCAA	1																																																													1
TATGAT	1																																																													1
TATTTC	1																																																													1
TATTTT	1																																																													1
TCAAAA		1						1																																																						2
TCAAAC	1																																																													1
TCAAAT	1																																																													1
TCAACA	1																																																													1
TCAACT	1																																																													1
TCAATG			1																																																											1
TCACAC	1																																																													1
TCACAT	1																																																													1
TCACCA	1																																																													1
TCACGG	1																																																													1
TCAGAA	1																																																													1
TCATAC	2																																																													2
TCATCG	1																																																													1
TCATCT	2																																																													2
TCATTT	1																																																													1
TCCACG	1																																																													1
TCCACT	1																																																													1
TCCAGA		1																																																												1
TCCATT	1																																																													1
TCCCCA	1																																																													1
TCCCGA	1																																																													1
TCCCGG	1																																																													1
TCCCTG	1																																																													1
TCCGAC	1																																																													1
TCCGAG	1																																																													1
TCCGAT	1																																																													1
TCCGGC	1	1																																																												2
TCCTAC	1																																																													1
TCCTCA	2		1																																																											3
TCCTCG	3																																																													3
TCCTCT	2																																																													2
TCCTGC			1																																																											1
TCCTGG	1		1																																																											2
TCCTGT	1																																																													1
TCCTTC	2																																																													2
TCGACA	2																																																													2
TCGACC	1																																																													1
TCGACG	1																																																													1
TCGAGG	1																																																													1
TCGATG					1																																																									1
TCGCAC	1																																																													1
TCGCCA	1																																																													1
TCGCCC	3																																																													3
TCGCTG	2																																																													2
TCGGAC	1																																																													1
TCGGCA	1																																																													1
TCGGTG	2																																																													2
TCGTCA	3																																																													3
TCGTCC	3																																																													3
TCGTGC	1																																																													1
TCGTGG		2																																																												2
TCGTGT	1																																																													1
TCGTTG	1																																																													1
TCTATT			1																																																											1
TCTCAC	1																																																													1
TCTCCA		1																																																												1
TCTCCG	1																																																													1
TCTCCT	3																																																													3
TCTCGA	2																																																													2
TCTCTG	1																																																													1
TCTCTT	1																																																													1
TCTGAA	1																																																													1
TCTGAT			1																																																											1
TCTGCA	2																																																													2
TCTGCC	1																																																													1
TCTGGT				1																																																										1
TCTGTA	1																																																													1
TCTGTT	2	1																																																												3
TCTTCA	2																																																													2
TCTTCC	1																																																													1
TCTTCG	1																																																													1
TCTTGT	1																																																													1
TCTTTC	2	1																																																												3
TCTTTT	6																																																													6
TGAAAA							1																																																							1
TGAAGA	1																																																													1
TGAAGG		1																																																												1
TGAATG	1																																																													1
TGACAC	1																																																													1
TGACAG	1																																																													1
TGACCA	1																																																													1
TGACTC	1																																																													1
TGAGGG	1																																																													1
TGATTT	1	1																																																												2
TGCAAG					1																																																									1
TGCACC			1																																																											1
TGCAGA	1																																																													1
TGCAGC	1																																																													1
TGCATC	1																																																													1
TGCATT	2																																																													2
TGCCCT	1																																																													1
TGCCGC	2																																																													2
TGCCTT	2																																																													2
TGCGAC	1			1																																																										2
TGCGGC	1																																																													1
TGCTCG	1																																																													1
TGCTGA	2																																																													2
TGCTGG					1				1																																																					2
TGCTGT	8	2		1																																																										11
TGCTTC	2																																																													2
TGCTTG	3																																																													3
TGCTTT	1					1																																																								2
TGGATG	1																																																													1
TGGCAG		1																																																												1
TGGCCA	1																																																													1
TGGCCG	1																																																													1
TGGCCT	1																																																													1
TGGCGA	1																																																													1
TGGCGG	1																																																													1
TGGGAC	1																																																													1
TGGGCA	1																																																													1
TGGGGA	1																																																													1
TGGTCT	1	1																																																												2
TGGTGC	2																																																													2
TGGTGT	2																																																													2
TGGTTG	1																																																													1
TGGTTT	1																																																													1
TGTATG	2																																																													2
TGTCCA	1																																																													1
TGTCCT	1																																																													1
TGTCGA	1	1	1																																																											3
TGTCGT	3																																																													3
TGTCTT	1																																																													1
TGTGAC	1	1																																																												2
TGTGAG	1																																																													1
TGTGAT	1																																																													1
TGTGCG	1																																																													1
TGTGGA	1																																																													1
TGTGGT	2	1						1																																																						4
TGTTAG	1									1																																																				2
TGTTCC	1	1																																																												2
TGTTCT		1																																																												1
TGTTGA	2																																																													2
TGTTGC	9	1	2						1																																																					13
TGTTGG		1																																																												1
TGTTTT	1		1																																																											2
TTAGTC	3																																																													3
TTAGTT	1																																																													1
TTATAT	1																																																													1
TTATCG		1																																																												1
TTATTT	1																																																													1
TTCCTC		1																																																												1
TTCCTT	1																																																													1
TTCGGG	1																																																													1
TTCGTC	2																																																													2
TTCTCC	2																																																													2
TTCTGA	1																																																													1
TTCTGG	1	1																																																												2
TTCTGT	2																																																													2
TTCTTT	2	1																																																												3
TTGAAC	1																																																													1
TTGATG		1																																																												1
TTGCAC	1																																																													1
TTGCAG	1																																																													1
TTGCAT	1																																																													1
TTGCCA	1																																																													1
TTGCCT	1																																																													1
TTGCTG	2																																																													2
TTGGCC	1																																																													1
TTGGCG	1																																																													1
TTGGTG	1																																																													1
TTGGTT	2																																																													2
TTGTAT	2																																																													2
TTGTCT	1																																																													1
TTGTGC	1																																																													1
TTGTGG		1																																																												1
TTGTTC	1																																																													1
TTGTTT	3																																																													3
TTTACT	1																																																													1
TTTATA	1																																																													1
TTTATT	2																																																													2
TTTCAT	1																																																													1
TTTCCA		1																																																												1
TTTCCC	2																																																													2
TTTCCT	2	1		1																																																										4
TTTCGT	1																																																													1
TTTCTC	1																																																													1
TTTCTT	6	3								1	1																																																			11
TTTGAA	1																																																													1
TTTGAT	3				1																																																									4
TTTGCG			1																																																											1
TTTGTA	2																																																													2
TTTGTT			1																																																											1
TTTTAC	2																																																													2
TTTTAT	4	1																																																												5
TTTTCA	2																																																													2
TTTTCC		1																																																												1
TTTTCT	11	1	1																																																											13
TTTTGA	1																																																													1
TTTTGG	1																																																													1
TTTTGT	4	1	1																																																											6
TTTTTA	6	1																																																												7
TTTTTC	14			1																																																										15
TTTTTG	2	1	1																																																											4

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	25	26	17	26	20	11	11	6	8	7	10	6	4	3	4	2	2	2	1	3		3	3	2		1		1							1	1								1	207
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	5	4	1	3	1		1						1							1																								22
AC/GT	-	-	-	131	49	29	24	15	9	5	4	4	3	4		1	1																																													279
AG/CT	-	-	-	216	99	73	30	12	10	5	6	4		2	3	2	2																	1																												465
AT/AT	-	-	-	46	19	13	11	4	3	1			1				1																																													99
CG/CG	-	-	-	11	1																																																									12
AAC/GTT	-	-	70	36	18	18	15	7	4	4	1	1		1		1						1	1	1																																						179
AAG/CTT	-	-	129	40	10	4	1	1	1		1							1		1				1																																						190
AAT/ATT	-	-	59	41	18	7	2	1	1		1			1	1																																															132
ACC/GGT	-	-	83	26	6	4	2	1																																																						122
ACG/CGT	-	-	147	42	11	7	2																																																							209
ACT/AGT	-	-	8	7	4			1		1			1																																																	22
AGC/CTG	-	-	255	118	48	24	12	5	2	2																																																				466
AGG/CCT	-	-	93	30	10	4	7	2	1																																																					147
ATC/ATG	-	-	16	4	3	2		2																																																						27
CCG/CGG	-	-	123	32	12	4	2	1																																																						174
AAAC/GTTT	-	18	3	2		1																																																								24
AAAG/CTTT	-	70	20	5	1	1		1			1							1																																												100
AAAT/ATTT	-	23	2	1																																																										26
AACC/GGTT	-		1																																																											1
AACG/CGTT	-	4		1																																																										5
AAGC/CTTG	-	4		1																																																										5
AAGG/CCTT	-	9	4																																																											13
AATC/ATTG	-	3	1		1																																																									5
AATG/ATTC	-	2	1																																																											3
AATT/AATT	-	2			1																																																									3
ACAG/CTGT	-	11	1	2					1																																																					15
ACAT/ATGT	-	3	2											1																																																6
ACCC/GGGT	-	4																																																												4
ACCG/CGGT	-	1	1																																																											2
ACCT/AGGT	-	4																																																												4
ACGC/CGTG	-	4	1	1																																																										6
ACGG/CCGT	-	2																																																												2
ACGT/ACGT	-	1																																																												1
ACTC/AGTG	-	3				1																																																								4
ACTG/AGTC	-	1																																																												1
AGAT/ATCT	-	3																																																												3
AGCC/CTGG	-	10	3	1																																																										14
AGCG/CGCT	-	3	1																																																											4
AGGC/CCTG	-	1	1			1																																																								3
AGGG/CCCT	-	7	2																																																											9
ATCC/ATGG	-	5																																																												5
ATGC/ATGC	-		1																																																											1
CCCG/CGGG	-	2																																																												2
CCGG/CCGG	-	5																																																												5
AAAAC/GTTTT	71	11	6																																																											88
AAAAG/CTTTT	266	33	7	3		1						1		1																																																312
AAAAT/ATTTT	124	13	1		1					1																																																				140
AAACC/GGTTT	3																																																													3
AAACG/CGTTT	29	3					1																																																							33
AAACT/AGTTT	1	1																																																												2
AAAGC/CTTTG	12	2	1																																																											15
AAAGG/CCTTT	35	1																																																												36
AAAGT/ACTTT	5																																																													5
AAATC/ATTTG	12	2																																																												14
AAATG/ATTTC	9																																																													9
AAATT/AATTT	2		1																																																											3
AACAC/GTGTT	14	1																																																												15
AACAG/CTGTT	10	1								1																																																				12
AACAT/ATGTT	4																																																													4
AACCC/GGGTT	1																																																													1
AACCG/CGGTT	3																																																													3
AACGC/CGTTG	6	2																																																												8
AACGG/CCGTT	3																																																													3
AACTC/AGTTG	6																																																													6
AACTG/AGTTC	1																																																													1
AAGAC/CTTGT	15			1																																																										16
AAGAG/CTCTT	51	8																																																												59
AAGAT/ATCTT	2																																																													2
AAGCC/CTTGG	6																																																													6
AAGCG/CGCTT	6																																																													6
AAGGC/CCTTG	13	1																																																												14
AAGGG/CCCTT	10	1																																																												11
AAGGT/ACCTT	1																																																													1
AAGTC/ACTTG	5																																																													5
AAGTG/ACTTC	2																																																													2
AATAC/ATTGT	1	1	1																																																											3
AATAG/ATTCT	3																																																													3
AATAT/ATATT	2	1																																																												3
AATCC/ATTGG	2																																																													2
AATCG/ATTCG	3																																																													3
AATCT/AGATT	2																																																													2
AATGC/ATTGC	5	1																																																												6
AATGG/ATTCC	1																																																													1
AATTC/AATTG	3	1																																																												4
ACACC/GGTGT	11	1																																																												12
ACACG/CGTGT	11			1																																																										12
ACACT/AGTGT	1	1																																																												2
ACAGC/CTGTG	8																																																													8
ACAGG/CCTGT	7	3																																																												10
ACAGT/ACTGT	1																																																													1
ACATC/ATGTG	8	3			1																																																									12
ACATG/ATGTC	2																																																													2
ACCAG/CTGGT	12	2																																																												14
ACCAT/ATGGT	4	1																																																												5
ACCCC/GGGGT	1																																																													1
ACCCT/AGGGT	1																																																													1
ACCGG/CCGGT	1																																																													1
ACCTC/AGGTG	7	1																																																												8
ACCTG/AGGTC	1																																																													1
ACGAG/CGTCT	8								1																																																					9
ACGAT/ATCGT	4																																																													4
ACGCC/CGTGG	3																																																													3
ACGCG/CGCGT	3																																																													3
ACGCT/AGCGT	1																																																													1
ACGGC/CCGTG	1	1																																																												2
ACGTC/ACGTG	3																																																													3
ACTAT/AGTAT	1																																																													1
ACTCC/AGTGG	3																																																													3
ACTCG/AGTCG	8	2																																																												10
ACTCT/AGAGT	2																																																													2
ACTGC/AGTGC	4																																																													4
ACTGG/AGTCC	8	3																																																												11
AGAGC/CTCTG	6																																																													6
AGAGG/CCTCT	30	3																																																												33
AGATC/ATCTG	3																																																													3
AGATG/ATCTC	13	3	1																																																											17
AGCAT/ATGCT	1																																																													1
AGCCC/CTGGG	11																																																													11
AGCGC/CGCTG	4																																																													4
AGCGG/CCGCT	1																																																													1
AGCTC/AGCTG	4																																																													4
AGGAT/ATCCT	2																																																													2
AGGCC/CCTGG	47	11																																																												58
AGGCG/CCTCG	10	2																																																												12
AGGGC/CCCTG	4							1																																																						5
AGGGG/CCCCT	11	2																																																												13
ATCCC/ATGGG	7	2																																																												9
ATCGC/ATGCG	11	6	1																																																											18
ATGCC/ATGGC	3																																																													3
CCCCG/CGGGG	1																																																													1
CCCGG/CCGGG	1																																																													1
CCGCG/CGCGG	2																																																													2
AAAAAC/GTTTTT	23	3	4																																																											30
AAAAAG/CTTTTT	80	10	2	2			1			1	1																																																			97
AAAAAT/ATTTTT	35	5	2	1																																																										43
AAAACC/GGTTTT	8	1																																																												9
AAAACG/CGTTTT	4																																																													4
AAAACT/AGTTTT	2																																																													2
AAAAGC/CTTTTG	7	4				1																																																								12
AAAAGG/CCTTTT	9	2	2	1																																																										14
AAAAGT/ACTTTT	3																																																													3
AAAATC/ATTTTG	14	5			1			1																																																						21
AAAATG/ATTTTC	6	1	1				1																																																							9
AAAATT/AATTTT	2	1																																																												3
AAACAC/GTGTTT	2																																																													2
AAACAG/CTGTTT	10	2	2	1																																																										15
AAACCC/GGGTTT	1																																																													1
AAACGC/CGTTTG		1	1							1																																																				3
AAACGG/CCGTTT	3																																																													3
AAACTC/AGTTTG	2																																																													2
AAACTG/AGTTTC	1																																																													1
AAAGAC/CTTTGT	5																																																													5
AAAGAG/CTCTTT	13	1																																																												14
AAAGCC/CTTTGG	2							1																																																						3
AAAGCG/CGCTTT	1																																																													1
AAAGGC/CCTTTG	5		1																																																											6
AAAGGG/CCCTTT	6																																																													6
AAAGTG/ACTTTC	1	1																																																												2
AAATAC/ATTTGT	5		1																																																											6
AAATAG/ATTTCT	4	1	1																																																											6
AAATAT/ATATTT	2																																																													2
AAATCC/ATTTGG	2																																																													2
AAATCG/ATTTCG	4	1																																																												5
AAATGC/ATTTGC	6																																																													6
AAATGG/ATTTCC	3	1																																																												4
AAATTC/AATTTG	2																																																													2
AACAAG/CTTGTT	2	2																																																												4
AACAAT/ATTGTT	2																																																													2
AACACC/GGTGTT	8	1																																																												9
AACACG/CGTGTT	1																																																													1
AACACT/AGTGTT	1			1						10																																																				12
AACAGC/CTGTTG	47	11	4	2	1				1																																																					66
AACAGG/CCTGTT	5	1																																																												6
AACATC/ATGTTG	8	3																																																												11
AACATG/ATGTTC	2																																																													2
AACCAC/GGTTGT	10	3	1					1																																																						15
AACCAG/CTGGTT	5	2		1																																																										8
AACCAT/ATGGTT	2																																																													2
AACCCC/GGGGTT	1																																																													1
AACCCG/CGGGTT	1																																																													1
AACCGC/CGGTTG	4	1	1																																																											6
AACCTC/AGGTTG	4																																																													4
AACCTG/AGGTTC	5																																																													5
AACCTT/AAGGTT	1																																																													1
AACGAC/CGTTGT	11	1																																																												12
AACGAG/CGTTCT	2																																																													2
AACGAT/ATCGTT	1	1																																																												2
AACGCC/CGTTGG	9	1		1																																																										11
AACGCG/CGCGTT	1																																																													1
AACGGC/CCGTTG	12	3																																																												15
AACGGT/ACCGTT	1	1																																																												2
AACGTC/ACGTTG	5																																																													5
AACGTG/ACGTTC	1																																																													1
AACTAC/AGTTGT	1																																																													1
AACTCC/AGTTGG	1																																																													1
AACTCG/AGTTCG	1																																																													1
AACTGC/AGTTGC	5																																																													5
AACTGG/AGTTCC	2																																																													2
AACTTC/AAGTTG	1																																																													1
AACTTG/AAGTTC	1																																																													1
AAGACC/CTTGGT	5	2																																																												7
AAGACG/CGTCTT	10																																																													10
AAGACT/AGTCTT	4																																																													4
AAGAGC/CTCTTG	3	2																																																												5
AAGAGG/CCTCTT	11	4	1																																																											16
AAGAGT/ACTCTT				1																																																										1
AAGATC/ATCTTG	1																																																													1
AAGATG/ATCTTC	7	1																																																												8
AAGCAC/CTTGTG	7	1																																																												8
AAGCAG/CTGCTT	9	2																																																												11
AAGCCC/CTTGGG	4	1																																																												5
AAGCCG/CGGCTT	2																																																													2
AAGCGG/CCGCTT	1	1																																																												2
AAGCTC/AGCTTG	2																																																													2
AAGCTG/AGCTTC	2	1																																																												3
AAGGAC/CCTTGT	7					1																																																								8
AAGGAG/CCTTCT	18	2		1																																																										21
AAGGCC/CCTTGG	7																																																													7
AAGGCG/CCTTCG	3																																																													3
AAGGCT/AGCCTT	1																																																													1
AAGGGC/CCCTTG	7		1																																																											8
AAGGGG/CCCCTT	5																																																													5
AAGGTC/ACCTTG		1	1																																																											2
AAGGTG/ACCTTC	2	1																																																												3
AAGTAC/ACTTGT		1																																																												1
AAGTAG/ACTTCT	1																																																													1
AAGTCC/ACTTGG	3																																																													3
AAGTCG/ACTTCG	2																																																													2
AAGTGC/ACTTGC	2		1		1																																																									4
AAGTGG/ACTTCC	5																																																													5
AATAGG/ATTCCT	1																																																													1
AATAGT/ACTATT	2																																																													2
AATATC/ATATTG	3																																																													3
AATCAC/ATTGTG	1																																																													1
AATCAG/ATTCTG	3		1																																																											4
AATCAT/ATGATT	2			1																																																										3
AATCCC/ATTGGG	1																																																													1
AATCGG/ATTCCG	2																																																													2
AATCTG/AGATTC	1																																																													1
AATGAC/ATTGTC	3	1																																																												4
AATGAG/ATTCTC	1	1																																																												2
AATGAT/ATCATT	1	1																																																												2
AATGCC/ATTGGC	4																																																													4
AATGCG/ATTCGC	2																																																													2
AATGGC/ATTGCC	4																																																													4
AATGGT/ACCATT	1																																																													1
AATGTC/ACATTG			1																																																											1
AATGTG/ACATTC	3	1																																																												4
AATTAG/AATTCT	1																																																													1
AATTCC/AATTGG	1																																																													1
ACACAG/CTGTGT	2	2																																																												4
ACACAT/ATGTGT	4	1																																																												5
ACACCC/GGGTGT	4																																																													4
ACACCG/CGGTGT	3	1																																																												4
ACACCT/AGGTGT		1																																																												1
ACACGC/CGTGTG	4	1																																																												5
ACACTC/AGTGTG	3	1																																																												4
ACACTG/AGTGTC	2																																																													2
ACAGAG/CTCTGT	6	2																																																												8
ACAGAT/ATCTGT	2																																																													2
ACAGCC/CTGTGG	4	1																																																												5
ACAGCG/CGCTGT	11																																																													11
ACAGCT/AGCTGT	3																																																													3
ACAGGC/CCTGTG	8	1																																																												9
ACAGGG/CCCTGT	1																																																													1
ACAGGT/ACCTGT	1																																																													1
ACAGTC/ACTGTG	2	2																																																												4
ACAGTG/ACTGTC	5																																																													5
ACATAT/ATATGT		1																																																												1
ACATCC/ATGTGG	2	1																																																												3
ACATCG/ATGTCG	8	1	1		1																																																									11
ACATCT/AGATGT	1																																																													1
ACATGC/ATGTGC	3																																																													3
ACATGG/ATGTCC	4																																																													4
ACCACG/CGTGGT	6	4																																																												10
ACCACT/AGTGGT	1	1																																																												2
ACCAGC/CTGGTG	11	1	1		2				1																																																					16
ACCAGG/CCTGGT	4		1																																																											5
ACCATC/ATGGTG	2	1																																																												3
ACCATG/ATGGTC	2																																																													2
ACCCAG/CTGGGT	1																																																													1
ACCCAT/ATGGGT	1																																																													1
ACCCCG/CGGGGT	1	1	1																																																											3
ACCCGC/CGGGTG	1																																																													1
ACCCGT/ACGGGT		1																																																												1
ACCCTC/AGGGTG	3																																																													3
ACCCTG/AGGGTC	3																																																													3
ACCGAG/CGGTCT	4	1																																																												5
ACCGCC/CGGTGG	9	1																																																												10
ACCGCG/CGCGGT	2	1																																																												3
ACCGCT/AGCGGT	1																																																													1
ACCGGC/CCGGTG	10																																																													10
ACCGGG/CCCGGT	2																																																													2
ACCGTG/ACGGTC	3	1																																																												4
ACCTCC/AGGTGG	9			1																																																										10
ACCTCG/AGGTCG	7	1																																																												8
ACCTCT/AGAGGT	1																																																													1
ACCTGC/AGGTGC	3		1																																																											4
ACCTGG/AGGTCC	3																																																													3
ACGACT/AGTCGT	3																																																													3
ACGAGC/CGTGCT	4																																																													4
ACGAGG/CCTCGT	23	1	3		1																																																									28
ACGATC/ATCGTG	3		1																																																											4
ACGATG/ATCGTC	9	2																																																												11
ACGCAG/CGTCTG	5	2		1																																																										8
ACGCAT/ATGCGT	1																																																													1
ACGCCC/CGTGGG	1																																																													1
ACGCCG/CGGCGT	1																																																													1
ACGCCT/AGGCGT	3																																																													3
ACGCTC/AGCGTG	1		1																																																											2
ACGGAG/CCGTCT	4																																																													4
ACGGCC/CCGTGG	8		1																																																											9
ACGGCG/CCGTCG	5																																																													5
ACGGCT/AGCCGT	1																																																													1
ACGGGC/CCCGTG	1																																																													1
ACGTAG/ACGTCT		1																																																												1
ACGTCC/ACGTGG	2																																																													2
ACGTCG/ACGTCG	5																																																													5
ACTCAG/AGTCTG	1																																																													1
ACTCAT/AGTATG	3																																																													3
ACTCCC/AGTGGG		1																																																												1
ACTCCG/AGTCGG	3	1																																																												4
ACTCCT/AGGAGT	1																																																													1
ACTCGC/AGTGCG	1																																																													1
ACTCGG/AGTCCG	4																																																													4
ACTCTC/AGAGTG	2	1																																																												3
ACTCTG/AGAGTC	3																																																													3
ACTGAG/AGTCTC	4																																																													4
ACTGCC/AGTGGC	6	4																																																												10
ACTGCG/AGTCGC	7	1		1																																																										9
ACTGGC/AGTGCC	6																																																													6
ACTGGG/AGTCCC	4				1																																																									5
AGAGCC/CTCTGG	5	1	1	1																																																										8
AGAGCG/CGCTCT	4																																																													4
AGAGGC/CCTCTG	6	1																																																												7
AGAGGG/CCCTCT	3	2																																																												5
AGATCC/ATCTGG		2																																																												2
AGATCG/ATCTCG	4																																																													4
AGATGC/ATCTGC	7	1																																																												8
AGATGG/ATCTCC	6	3																																																												9
AGCAGG/CCTGCT	4	1	1																																																											6
AGCATC/ATGCTG	2																																																													2
AGCCCC/CTGGGG		1																																																												1
AGCCCG/CGGGCT	1	2																																																												3
AGCCGC/CGGCTG	9	2																																																												11
AGCCGG/CCGGCT	7	3	1	1	1																																																									13
AGCCTC/AGGCTG	3	2	1																																																											6
AGCCTG/AGGCTC	3	2	2																																																											7
AGCGAT/ATCGCT	1																																																													1
AGCGCC/CGCTGG	4																																																													4
AGCGCG/CGCGCT	2																																																													2
AGCGGC/CCGCTG	29	2																																																												31
AGCGGG/CCCGCT	2																																																													2
AGCTCC/AGCTGG	6	1																																																												7
AGCTCG/AGCTCG	2																																																													2
AGCTGC/AGCTGC	3																																																													3
AGGATG/ATCCTC	5		1																																																											6
AGGCCC/CCTGGG	6	1																																																												7
AGGCCG/CCTCGG	6																																																													6
AGGCGG/CCGCCT	4																																																													4
AGGGCC/CCCTGG	6	1	1																																																											8
AGGGCG/CCCTCG	10	1		1																																																										12
AGGGGG/CCCCCT	1																																																													1
ATATGC/ATATGC	1																																																													1
ATCCCC/ATGGGG	3																																																													3
ATCCCG/ATCGGG	1																																																													1
ATCCGC/ATGCGG	1																																																													1
ATCGCC/ATGGCG	2																																																													2
ATCGGC/ATGCCG	3			1																																																										4
ATGCCC/ATGGGC	5																																																													5
ATGCGC/ATGCGC	1																																																													1
ATGGCC/ATGGCC	2																																																													2
CCCCCG/CGGGGG	2																																																													2
CCCCGG/CCGGGG	2																																																													2
CCCGCG/CGCGGG	1																																																													1
CCGGCG/CCGGCG	2																																																													2
