Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-31/megassr/results/hub_GCA_042257725.1/fasta/hub_GCA_042257725.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              139
Total size of examined sequences (bp):           39563291
Total number of identified SSRs:                 5593
Number of SSR containing sequences:              133
Number of sequences containing more than 1 SSR:  126
Number of SSRs present in compound formation:    300


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	241
2	853
3	1664
4	276
5	1212
6	1347

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	14	13	13	10	10	6	5	6	4	6	4	4	4	2	3	1	1	2	1	2			1	1	1	1		1			1		1			1	119
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8		4	2		1		1								1																					17
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	5	4	2	1																											1					18
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	18	7	11	8	7	4	1	2	4		1	3	1	3	1	1		2		1		1				1			1						1	87
AC	-	-	-	24	11	3	1	5	2	1		2	2	1		1																																						53
AG	-	-	-	54	36	21	11	7	3	3	1	2		1																																								139
AT	-	-	-	22	14	9	6	3	3	1			1																																									59
CA	-	-	-	36	12	6	7	4	2		1	1		1																																								70
CG	-	-	-	4																																																		4
CT	-	-	-	43	20	15	6	3	2	1		2		1	1																																							94
GA	-	-	-	54	17	14	7	2	1		2						1																																					98
GC	-	-	-	7	1																																																	8
GT	-	-	-	20	8	9	6	3	2	3	2	1		1																																								55
TA	-	-	-	24	6	5	6	1									1																																					43
TC	-	-	-	65	26	22	5		3	1	3				2	2	1								1																													131
TG	-	-	-	49	18	11	10	3	3	1	1		1	1			1																																					99
AAC	-	-	13	6	3	2	3									1																																						28
AAG	-	-	42	7	1	1	1																																															52
AAT	-	-	4	4							1																																											9
ACA	-	-	9	6	1	4	2		1	2																																												25
ACC	-	-	16	3	3		1																																															23
ACG	-	-	14	7	1	1																																																23
ACT	-	-	1	1	1																																																	3
AGA	-	-	16	7	3	1					1													1																														29
AGC	-	-	20	6	6	2																																																34
AGG	-	-	11	1	1																																																	13
ATA	-	-	18	13	6	1	1	1																																														40
ATC	-	-	2					1																																														3
ATG	-	-	2					1																																														3
ATT	-	-	6	2	2	1	1							1																																								13
CAA	-	-	14	5	6	5	1	2	1																																													34
CAC	-	-	11	3		1	1																																															16
CAG	-	-	67	30	12	5	4	1		1																																												120
CAT	-	-	2	1		1																																																4
CCA	-	-	12	5		2																																																19
CCG	-	-	18	5	4		1																																															28
CCT	-	-	19	4	1		1																																															25
CGA	-	-	23	4			1																																															28
CGC	-	-	9	4	1																																																	14
CGG	-	-	19	5		1																																																25
CGT	-	-	9	3	2																																																	14
CTA	-	-			1																																																	1
CTC	-	-	13	5	3		1																																															22
CTG	-	-	44	13	14	5		1																																														77
CTT	-	-	27	5	1	2																																																35
GAA	-	-	12	4	1			1																																														18
GAC	-	-	32	8	3	1																																																44
GAG	-	-	27	9	1		2	2																																														41
GAT	-	-	5		2																																																	7
GCA	-	-	39	19	2	4	2	1		1																																												68
GCC	-	-	27	11	3	1																																																42
GCG	-	-	12	2	4	1		1																																														20
GCT	-	-	39	19	4	3	2	1	1																																													69
GGA	-	-	8	3	1	2	3																																															17
GGC	-	-	37	5		1	1																																															44
GGT	-	-	15	7	1																																																	23
GTA	-	-	1																																																			1
GTC	-	-	35	14	2	2	1																																															54
GTG	-	-	13	5	1			1																																														20
GTT	-	-	15	6	3	5	3	2	1													1	1																															37
TAA	-	-	4	3	3																																																	10
TAC	-	-	4	4	1								1																																									10
TAG	-	-	2	2	1			1		1																																												7
TAT	-	-	9	11	2	3	1																																															26
TCA	-	-	4	2																																																		6
TCC	-	-	16	8	3	2			1																																													30
TCG	-	-	34	6	3	3																																																46
TCT	-	-	17	4	1				1																																													23
TGA	-	-	1	1	1	1																																																4
TGC	-	-	47	30	10	5	4	1	1																																													98
TGG	-	-	15	4	1	1																																																21
TGT	-	-	11	9	5	1	3	1		1				1																																								32
TTA	-	-	16	9	5	1			1																																													32
TTC	-	-	15	12	3													1		1																																		32
TTG	-	-	8	4		1	3	2	1	1	1	1																																										22
AAAC	-	5	1	1																																																		7
AAAG	-	9	4		1			1																																														15
AAAT	-	4	1	1																																																		6
AACA	-	2																																																				2
AACC	-		1																																																			1
AAGA	-	7	1																																																			8
AAGG	-	1																																																				1
AATA	-	2																																																				2
AATT	-				1																																																	1
ACAA	-	1																																																				1
ACAG	-	1		1																																																		2
ACCT	-	1																																																				1
ACGA	-	1																																																				1
AGAA	-	11	4	2													1																																					18
AGAC	-	1																																																				1
AGAT	-	1																																																				1
AGCA	-	1																																																				1
AGCC	-	1																																																				1
AGCG	-		1																																																			1
AGGC	-					1																																																1
AGTG	-	1																																																				1
ATAA	-	2																																																				2
ATAC	-	1																																																				1
ATAG	-	1																																																				1
ATCA	-		1																																																			1
ATGG	-	1																																																				1
ATGT	-		1																																																			1
ATTT	-	2	1																																																			3
CAAA	-	1		1																																																		2
CAAG	-	1		1																																																		2
CAAT	-	3			1																																																	4
CACC	-	2																																																				2
CATC	-	1																																																				1
CATT	-		1																																																			1
CCCT	-	1																																																				1
CCTC	-	1	1																																																			2
CCTT	-	1	1																																																			2
CGAA	-	1																																																				1
CGAC	-	1																																																				1
CGAG	-	1																																																				1
CGCA	-	1		1																																																		2
CGCC	-	1																																																				1
CGGT	-		1																																																			1
CTAC	-	1																																																				1
CTCA	-	1																																																				1
CTCC	-	2																																																				2
CTGG	-	1																																																				1
CTGT	-	5							1																																													6
CTTC	-	1	1																																																			2
CTTG	-	1																																																				1
CTTT	-	7	1																																																			8
GAAA	-	10	1																																																			11
GAAG	-	3	1																																																			4
GACA	-		1																																																			1
GACT	-	1																																																				1
GAGC	-	1																																																				1
GAGG	-		1																																																			1
GCAA	-	1																																																				1
GCAC	-	1	1																																																			2
GCCA	-	1	1																																																			2
GCCG	-	2																																																				2
GCGG	-	1																																																				1
GCGT	-	1																																																				1
GCTG	-	1	1																																																			2
GGAA	-	2																																																				2
GGAC	-	1																																																				1
GGAG	-	2																																																				2
GGAT	-	1																																																				1
GGCA	-	1																																																				1
GGCC	-	3																																																				3
GGCT	-	1	1	1																																																		3
GTAC	-	1																																																				1
GTCC	-	1																																																				1
GTCT	-	1		1																																																		2
GTGA	-					1																																																1
GTGC	-	1																																																				1
GTGG	-	1																																																				1
GTTC	-	1																																																				1
GTTT	-	1																																																				1
TAAA	-	1																																																				1
TAAT	-	1																																																				1
TACA	-	1																																																				1
TACC	-	1																																																				1
TAGG	-	1																																																				1
TATG	-	1												1																																								2
TATT	-	3																																																				3
TCAC	-	1																																																				1
TCCA	-	2																																																				2
TCCC	-	1																																																				1
TCCT	-	1																																																				1
TCGC	-	1																																																				1
TCGT	-			1																																																		1
TCTA	-	1																																																				1
TCTT	-	8	2	1																																																		11
TGCA	-		1																																																			1
TGCC	-		1																																																			1
TGGC	-	5																																																				5
TGGG	-	1																																																				1
TGTA	-		1																																																			1
TGTC	-	3																																																				3
TGTT	-	6				1																																																7
TTAA	-	1																																																				1
TTAT	-	2																																																				2
TTCA	-	2																																																				2
TTCC	-		1																																																			1
TTCG	-	1																																																				1
TTCT	-	4	3			1																																																8
TTGT	-	1	2																																																			3
TTTA	-	7																																																				7
TTTC	-	14	4	2							1																																											21
TTTG	-	1																																																				1
AAAAC	16	3	1																																																			20
AAAAG	40	5	1	1		1							2																																									50
AAAAT	26	4																																																				30
AAACA	5	1																																																				6
AAACG	5						1																																															6
AAACT	1																																																					1
AAAGA	30	2																																																				32
AAAGC	1	1																																																				2
AAAGG	5																																																					5
AAATA	12	1																																																				13
AAATC	3																																																					3
AAATG	2																																																					2
AACAA	2																																																					2
AACAC	1																																																					1
AACAG	1																																																					1
AACCA	1																																																					1
AACGA	5																																																					5
AACGC		1																																																				1
AACGG	1																																																					1
AACTG	1																																																					1
AAGAA	27	3																																																				30
AAGAC	1			1																																																		2
AAGAG	5	1																																																				6
AAGCA	1																																																					1
AAGCG	1																																																					1
AAGGA	5																																																					5
AAGGG	1																																																					1
AATAA	5	1																																																				6
AATAT		1																																																				1
AATCA		1																																																				1
AATGA	1																																																					1
ACAAA	9																																																					9
ACAAC	2	1																																																				3
ACAAT		1																																																				1
ACACA	1																																																					1
ACACC	1																																																					1
ACACG	1																																																					1
ACACT		1																																																				1
ACAGA	1																																																					1
ACAGC	1																																																					1
ACAGG		1																																																				1
ACATC		1																																																				1
ACCAA	1																																																					1
ACCAC	2																																																					2
ACCAG	1																																																					1
ACCGA	1																																																					1
ACCGG	1																																																					1
ACGAA	1																																																					1
ACGAC	1																																																					1
ACGAG	1																																																					1
ACGCA	1																																																					1
ACGCG	1																																																					1
ACGTC	1																																																					1
ACTCG	2																																																					2
ACTCT	1																																																					1
ACTGG	2																																																					2
ACTTT	2																																																					2
AGAAA	12	1																																																				13
AGAAC	1									1																																												2
AGAAG	9																																																					9
AGACA	2																																																					2
AGACC	1																																																					1
AGACG	3																																																					3
AGAGA	6	1																																																				7
AGAGC	1																																																					1
AGAGG	3	1																																																				4
AGATC	1																																																					1
AGATG	2																																																					2
AGATT	1																																																					1
AGCAA	1		1																																																			2
AGCAG	1																																																					1
AGCGA	1																																																					1
AGCTC	1																																																					1
AGCTG	1																																																					1
AGGAA	2																																																					2
AGGAG	1																																																					1
AGGCA	1	1																																																				2
AGGCC	7																																																					7
AGGGG	2																																																					2
AGTCA	1																																																					1
AGTTG	2																																																					2
ATAAA	14																																																					14
ATACG	1																																																					1
ATATA	1																																																					1
ATCAG	1																																																					1
ATCCT	1																																																					1
ATCGA	1																																																					1
ATCGC	1																																																					1
ATCTA	1																																																					1
ATCTC	2																																																					2
ATGAA	1																																																					1
ATGAC	1																																																					1
ATGAG	1	1																																																				2
ATGCA	2																																																					2
ATGCG		1																																																				1
ATGGC	1																																																					1
ATGGG	1																																																					1
ATTAA	1																																																					1
ATTGA	1																																																					1
ATTGT			1																																																			1
ATTTA	1																																																					1
ATTTC	2																																																					2
ATTTG	1																																																					1
ATTTT	6	1																																																				7
CAAAA	5	1	1																																																			7
CAAAC	1																																																					1
CAAAT	2	1																																																				3
CAACG	1	1																																																				2
CAACT	1																																																					1
CAAGA	1																																																					1
CAAGG	1																																																					1
CAAGT	1																																																					1
CAATT		1																																																				1
CACAA	2																																																					2
CACAC	2	1																																																				3
CACAG	1																																																					1
CACCA	1																																																					1
CACGA	3																																																					3
CACTC	1																																																					1
CACTG	1																																																					1
CAGAA	1	1																																																				2
CAGAG	2																																																					2
CAGCA	1																																																					1
CAGCG	1																																																					1
CAGGA	1																																																					1
CAGGC	5	1																																																				6
CAGGG	2							1																																														3
CATAC	2																																																					2
CATCA	2																																																					2
CATCC	4	1																																																				5
CATCG	3		1																																																			4
CATTG	1																																																					1
CCAAT	1																																																					1
CCACA	1																																																					1
CCACC	1																																																					1
CCAGA	2																																																					2
CCAGG	3	1																																																				4
CCCAA	1																																																					1
CCCAT	2																																																					2
CCCCT	1	1																																																				2
CCCTC	2																																																					2
CCCTT	1																																																					1
CCGCG	1																																																					1
CCTCC	1																																																					1
CCTCT	3																																																					3
CCTGG	2																																																					2
CCTGT	1																																																					1
CCTTC	1																																																					1
CCTTG	2																																																					2
CCTTT	1																																																					1
CGAAA	1																																																					1
CGAAC	2																																																					2
CGAAG	1																																																					1
CGACA	1																																																					1
CGAGG	3																																																					3
CGATA	1																																																					1
CGATG	1																																																					1
CGCAG	1																																																					1
CGCAT	2	1																																																				3
CGCCA	1																																																					1
CGCCT	1																																																					1
CGCGC	1																																																					1
CGTAT	1																																																					1
CGTCA	1																																																					1
CGTTT	2																																																					2
CTATA	1																																																					1
CTCAC	2	1																																																				3
CTCAG	2																																																					2
CTCAT	2																																																					2
CTCCC	1																																																					1
CTCCT	2																																																					2
CTCGA	1	1																																																				2
CTCGC	1	1																																																				2
CTCTC	5	1																																																				6
CTCTT	4	1																																																				5
CTGAT	1																																																					1
CTGCT	1																																																					1
CTGGA	3																																																					3
CTGGC	4	3																																																				7
CTGGG	3																																																					3
CTGGT	1																																																					1
CTGTC		1																																																				1
CTTCC	1																																																					1
CTTCT	2																																																					2
CTTGA	1																																																					1
CTTGC	3																																																					3
CTTGG	1																																																					1
CTTGT	1																																																					1
CTTTA	1																																																					1
CTTTC	5																																																					5
CTTTT	30	4										1																																										35
GAAAA	21	5																																																				26
GAAAC	3	1																																																				4
GAAAG	8																																																					8
GAAGA	8	1																																																				9
GAAGC	1																																																					1
GAAGG	1	1																																																				2
GAAGT	2																																																					2
GACAA	1																																																					1
GACAC	1																																																					1
GACAG	2	1																																																				3
GACCA	1	1																																																				2
GACGA	1																																																					1
GACGC	1																																																					1
GACTC	1																																																					1
GACTG	1																																																					1
GACTT	1																																																					1
GAGAA	4																																																					4
GAGAG	5																																																					5
GAGAT	2																																																					2
GAGCG	1																																																					1
GAGGA	3	1																																																				4
GAGGG	2																																																					2
GAGGT	2																																																					2
GATAA	1																																																					1
GATAC	1																																																					1
GATGA	1	1																																																				2
GATGC		2																																																				2
GATGT		1																																																				1
GATTT	1																																																					1
GCAAG	1																																																					1
GCAGC	1																																																					1
GCATC	1																																																					1
GCATT	1																																																					1
GCCAA	1																																																					1
GCCAG	3																																																					3
GCCCA	1																																																					1
GCCGG	1																																																					1
GCCGT	1																																																					1
GCCTC	2																																																					2
GCCTG	3																																																					3
GCCTT	1																																																					1
GCGAC	1																																																					1
GCGAG		1																																																				1
GCGAT	2	1																																																				3
GCGTT	1																																																					1
GCTCT	1																																																					1
GCTGC	1																																																					1
GCTGG	1																																																					1
GCTTC	1																																																					1
GCTTG	1																																																					1
GCTTT	1																																																					1
GGAAA	1																																																					1
GGAAC	1																																																					1
GGAAG	4																																																					4
GGACA	2																																																					2
GGACT	1	2																																																				3
GGAGA	3																																																					3
GGAGG		1																																																				1
GGATG		1																																																				1
GGCAA	2																																																					2
GGCAC		1																																																				1
GGCAG	2																																																					2
GGCAT	1																																																					1
GGCCA	5	1																																																				6
GGCCT	5	1																																																				6
GGCGA	2																																																					2
GGCGT	1																																																					1
GGCTG	3																																																					3
GGCTT	2																																																					2
GGGAG	1																																																					1
GGGCT	2																																																					2
GGGGA	1																																																					1
GGGGC	1																																																					1
GGTAA	1																																																					1
GGTAT	1	1																																																				2
GGTCT	1																																																					1
GGTGA	1																																																					1
GGTGT	1																																																					1
GTAGC	1																																																					1
GTAGG	1																																																					1
GTAGT	1																																																					1
GTATG	1																																																					1
GTATT	1																																																					1
GTCAG	1																																																					1
GTCCA	1	1																																																				2
GTCGA	3	1																																																				4
GTCGT	1																																																					1
GTCTC	2								1																																													3
GTCTG	2																																																					2
GTCTT	3																																																					3
GTGAG	1																																																					1
GTGAT	3	1																																																				4
GTGCA	1																																																					1
GTGGA	2																																																					2
GTGGT	3																																																					3
GTGTT	1																																																					1
GTTAT	1																																																					1
GTTGA	1																																																					1
GTTGC	2																																																					2
GTTGT	4																																																					4
GTTTC	2	2																																																				4
GTTTT	4	1																																																				5
TAAAA	7	1																																																				8
TAAAG	1																																																					1
TAACA	2																																																					2
TAAGA	1																																																					1
TAATT			1																																																			1
TACAG	1																																																					1
TATAA	1																																																					1
TATCC	1																																																					1
TATTT	6		1																																																			7
TCAAC	1																																																					1
TCACA	1				1																																																	2
TCACC	1																																																					1
TCATC			1																																																			1
TCATG	1																																																					1
TCCCT	1																																																					1
TCCTC	2																																																					2
TCCTT	1																																																					1
TCGAA	1																																																					1
TCGAC	1																																																					1
TCGAT	1																																																					1
TCGCA		1																																																				1
TCGCC	1																																																					1
TCGTG	1			1																																																		2
TCGTT	1																																																					1
TCTAC	1																																																					1
TCTAT	1																																																					1
TCTCA	3																																																					3
TCTCC	3																																																					3
TCTCG	1																																																					1
TCTCT	5																																																					5
TCTGG	1																																																					1
TCTGT	2																																																					2
TCTTC	5	3																																																				8
TCTTG	3																																																					3
TCTTT	20			1																																																		21
TGAAA	1																																																					1
TGACG	1																																																					1
TGACT	1																																																					1
TGAGA		1																																																				1
TGATG	1																																																					1
TGATT	2																																																					2
TGCAC	1																																																					1
TGCAG	1																																																					1
TGCAT		1																																																				1
TGCCA	1																																																					1
TGCCT	1																																																					1
TGCGA	1																																																					1
TGCGT	1																																																					1
TGCTA	1																																																					1
TGCTT		1																																																				1
TGGAA	1																																																					1
TGGCC	10	4																																																				14
TGGCG	1																																																					1
TGGCT	1																																																					1
TGGGC	1																																																					1
TGGTC	2	1																																																				3
TGTCC	1																																																					1
TGTCG	2																																																					2
TGTCT	2																																																					2
TGTGA	1																																																					1
TGTGC	5																																																					5
TGTGT	3																																																					3
TGTTC	1																																																					1
TGTTT	1	3	1																																																			5
TTACT	1																																																					1
TTATT	8	1																																																				9
TTCAT	1																																																					1
TTCCG	1																																																					1
TTCCT	3																																																					3
TTCGC	1																																																					1
TTCGT	2																																																					2
TTCTA	2																																																					2
TTCTC	3	1																																																				4
TTCTG	3																																																					3
TTCTT	18	3	1																																																			22
TTGAA	2																																																					2
TTGAG	1																																																					1
TTGAT	2																																																					2
TTGCA	1																																																					1
TTGCC	1																																																					1
TTGCT	2																																																					2
TTGGA	1																																																					1
TTGTC	1																																																					1
TTGTT	7		3																																																			10
TTTAA	1																																																					1
TTTAT	10	1			1					1																																												13
TTTCA	1																																																					1
TTTCC	4	1																																																				5
TTTCG	7																																																					7
TTTCT	21	2	3																																																			26
TTTGA	1																																																					1
TTTGC	6																																																					6
TTTGT	9	2																																																				11
TTTTA	30	3																																																				33
TTTTC	47	8	2	1																																																		58
TTTTG	13																																																					13
AAAAAC	1																																																					1
AAAAAG	8	1	1				1																																															11
AAAAAT	1																																																					1
AAAACA	6	2																																																				8
AAAACC	1	1																																																				2
AAAACG	1																																																					1
AAAACT	1																																																					1
AAAAGA	5	1									1																																											7
AAAAGC	1	1																																																				2
AAAAGG				1																																																		1
AAAAGT	1																																																					1
AAAATA	3		1																																																			4
AAAATG	1	1																																																				2
AAAATT	1																																																					1
AAACAG	1																																																					1
AAACCA	1																																																					1
AAAGAA	13																																																					13
AAAGCC								1																																														1
AAAGCG	1																																																					1
AAAGGA	1																																																					1
AAAGGC	1																																																					1
AAAGGG	1																																																					1
AAATAA	4																																																					4
AAATAC	3																																																					3
AAATCA	1																																																					1
AAATGC	2																																																					2
AACAAA	4		1																																																			5
AACAAG	1																																																					1
AACACC	1																																																					1
AACACT										1																																												1
AACCAA	3																																																					3
AACCAG	1																																																					1
AACCAT	1																																																					1
AACGCA		1																																																				1
AACGGA	1																																																					1
AACGGC	2	1																																																				3
AACGGT	1																																																					1
AACGTC	1																																																					1
AACTAA	1																																																					1
AAGAAA	11	3					1																																															15
AAGAGA	2	1																																																				3
AAGATG	1																																																					1
AAGCAA		1																																																				1
AAGCAC	1																																																					1
AAGGAC	1																																																					1
AAGGCA	1																																																					1
AAGGCC	1																																																					1
AAGGGC	1																																																					1
AAGGGG	1																																																					1
AAGGTT	1																																																					1
AAGTGG	1																																																					1
AATAAA	2																																																					2
AATAAC	1																																																					1
AATACA			1																																																			1
AATCGA	3																																																					3
AATGAA	1																																																					1
AATGAG	1																																																					1
AATGCG	1																																																					1
AATGGC	1																																																					1
AATTGG	1																																																					1
ACAAAA		1	1																																																			2
ACAACC	1							1																																														2
ACAACG	4	1																																																				5
ACAACT	1																																																					1
ACAAGG	1																																																					1
ACACAA	1																																																					1
ACACGC	1																																																					1
ACACTA										1																																												1
ACAGAA	1																																																					1
ACAGAG	1																																																					1
ACAGAT	1																																																					1
ACAGCA	2																																																					2
ACAGGA	1																																																					1
ACAGGC	1	1																																																				2
ACATCG	2																																																					2
ACATGC	1																																																					1
ACCAAG	1																																																					1
ACCACA	2	1																																																				3
ACCAGA	1																																																					1
ACCAGC									1																																													1
ACCAGG	1																																																					1
ACCCCG	1																																																					1
ACCGCG		1																																																				1
ACCGGC	1																																																					1
ACCTCA	1																																																					1
ACCTCC	1																																																					1
ACCTCG	2	1																																																				3
ACCTGA	1																																																					1
ACGAAA	1																																																					1
ACGACC	1	1																																																				2
ACGACT	2																																																					2
ACGAGG	1																																																					1
ACGATA		1																																																				1
ACGCCA		1																																																				1
ACGGCA	1																																																					1
ACTAAC																1																																						1
ACTCAC		1																																																				1
ACTCAT	1																																																					1
ACTGCA	2																																																					2
ACTGCC		1																																																				1
ACTGTG	1																																																					1
AGAAAA	8	2								1																																												11
AGAAAG	3																																																					3
AGAACA	1																																																					1
AGAACC	1																																																					1
AGAAGG	2			1																																																		3
AGACAG		1																																																				1
AGACCA		2																																																				2
AGACCC	1																																																					1
AGACCG	1																																																					1
AGACGA	1																																																					1
AGACGC	1																																																					1
AGACGG	1																																																					1
AGACTA	1																																																					1
AGAGAC	1	1																																																				2
AGAGCA	1																																																					1
AGAGCC	1																																																					1
AGAGGA	1																																																					1
AGAGTC	1																																																					1
AGAGTG	1																																																					1
AGATCC		1																																																				1
AGATGA	1																																																					1
AGATGG	1																																																					1
AGCAAA	2																																																					2
AGCAAC		2	1																																																			3
AGCAAG		1																																																				1
AGCACA	1																																																					1
AGCACG	2																																																					2
AGCAGA	2	1																																																				3
AGCCAC	1																																																					1
AGCGAG	1																																																					1
AGCGGC	2																																																					2
AGCGGG	1																																																					1
AGCTCC	1																																																					1
AGCTCG	1																																																					1
AGCTGG	1																																																					1
AGCTGT	1																																																					1
AGGAAG	1																																																					1
AGGAGA	3																																																					3
AGGCAC	1																																																					1
AGGCAG	1																																																					1
AGGGAG		1																																																				1
AGGTCG	1																																																					1
AGGTGT		1																																																				1
AGGTTC	1																																																					1
AGTGGA	1																																																					1
AGTGGT	1																																																					1
AGTTGA	1																																																					1
ATAAAA	2	1																																																				3
ATAATC				1																																																		1
ATACAC	1																																																					1
ATATTA	1																																																					1
ATCAAA	2	1			1																																																	4
ATCAAC	1																																																					1
ATCACG	1																																																					1
ATCAGA	1		1																																																			2
ATCCTC	1																																																					1
ATCGAG	1																																																					1
ATGACA	1																																																					1
ATGCAA	3																																																					3
ATGCAG	1																																																					1
ATGCCA	1																																																					1
ATGCCC	1																																																					1
ATGCGT	1																																																					1
ATGGAA	1																																																					1
ATGGAG	1																																																					1
ATGGCC	1																																																					1
ATGTGA	1																																																					1
ATGTTG	1																																																					1
ATTACC	1																																																					1
ATTATC		1																																																				1
ATTCCT	1																																																					1
ATTGAC			1																																																			1
ATTTGG	1																																																					1
ATTTTC			1																																																			1
ATTTTG	1																																																					1
ATTTTT	2																																																					2
CAAAAA		1																																																				1
CAAAAC	1																																																					1
CAAAAG	1																																																					1
CAAAAT	1																																																					1
CAAAGA	1																																																					1
CAAATC	1																																																					1
CAACAC	2																																																					2
CAACAG	6	2	1																																																			9
CAACAT	3																																																					3
CAACCA		1																																																				1
CAACCT	1																																																					1
CAAGAA		1																																																				1
CAAGAC	1																																																					1
CAAGCA	1																																																					1
CAAGCC	1																																																					1
CAAGGC	2																																																					2
CAAGTC	1																																																					1
CAATAT	1																																																					1
CAATCA	1																																																					1
CACAAC	2																																																					2
CACACC	1																																																					1
CACACG	1																																																					1
CACAGC		1																																																				1
CACAGT		1																																																				1
CACATA	1																																																					1
CACATG	1																																																					1
CACATT		1																																																				1
CACCAG	2		1		1																																																	4
CACCGA	1																																																					1
CACCGC	1																																																					1
CACCTT		1																																																				1
CACGAC		1																																																				1
CACGCA	1																																																					1
CACGGC	1		1																																																			2
CACTGC	1																																																					1
CAGAAA	1																																																					1
CAGAAC	1																																																					1
CAGATA	1																																																					1
CAGCAA	11	2		1																																																		14
CAGCCG	1																																																					1
CAGCCT		1																																																				1
CAGCGC	3																																																					3
CAGCTC	1																																																					1
CAGGAG	1																																																					1
CAGGCA	1																																																					1
CAGGCC	1																																																					1
CAGGGC		1																																																				1
CAGGTC	1																																																					1
CAGTCG	1																																																					1
CAGTCT	2																																																					2
CAGTGC	1																																																					1
CAGTGG	1																																																					1
CAGTTC	1																																																					1
CATAAT	1																																																					1
CATATA		1																																																				1
CATCCC	1																																																					1
CATCCT	1																																																					1
CATCGG				1																																																		1
CATGCC	1																																																					1
CATGGA	1																																																					1
CATGTG	1																																																					1
CATGTT	1																																																					1
CATTCA	1																																																					1
CATTGG	1																																																					1
CATTTT	1						1																																															2
CCAAAA	1																																																					1
CCAAAG	2																																																					2
CCAAGC	1																																																					1
CCAAGG	2																																																					2
CCACAA			1																																																			1
CCACCG	1																																																					1
CCACGA		1																																																				1
CCACGG	2																																																					2
CCACTG		1																																																				1
CCAGAG	1			1																																																		2
CCAGCA	1																																																					1
CCAGGG	1																																																					1
CCAGTG	1																																																					1
CCATAC	1																																																					1
CCATCA		1																																																				1
CCATGT	1																																																					1
CCATTT	1																																																					1
CCCAAG	1																																																					1
CCCAGT	1																																																					1
CCCCTT	1																																																					1
CCCGAG		1																																																				1
CCCTCA	1																																																					1
CCCTCG				1																																																		1
CCCTCT		1																																																				1
CCCTGG	1		1																																																			2
CCCTTC	1																																																					1
CCGACA	1																																																					1
CCGAGA	1																																																					1
CCGCCA	3																																																					3
CCGCGC	1																																																					1
CCGCTG	3																																																					3
CCGCTT	1																																																					1
CCGGAG	1																																																					1
CCGGCA	2																																																					2
CCGGCG	1																																																					1
CCGTAC		1																																																				1
CCGTGA	2																																																					2
CCGTTG	1																																																					1
CCTCAG		1																																																				1
CCTCCA	5																																																					5
CCTCGC	1	1																																																				2
CCTCGG	1																																																					1
CCTCGT			1																																																			1
CCTCTC	1																																																					1
CCTCTT	2	2																																																				4
CCTGAA	2																																																					2
CCTGAG	1																																																					1
CCTGCT	1																																																					1
CCTGGC	1																																																					1
CCTGTA	1																																																					1
CCTTCC	1																																																					1
CCTTCT	2																																																					2
CCTTGC	2		1																																																			3
CCTTTG			1																																																			1
CGAACA	1																																																					1
CGAAGC	1																																																					1
CGAAGG	1																																																					1
CGAATG	1																																																					1
CGACAG	1																																																					1
CGACAT	1					1																																																2
CGACCG	1																																																					1
CGACCT	1																																																					1
CGACGG	1																																																					1
CGACTC	1	1																																																				2
CGACTG	1																																																					1
CGAGAA	1																																																					1
CGAGAC	1																																																					1
CGAGGA	3																																																					3
CGAGGT	1																																																					1
CGATGA	1																																																					1
CGATTT		1																																																				1
CGCAAC	1		1																																																			2
CGCACA		1																																																				1
CGCAGA	1																																																					1
CGCAGC	1	1																																																				2
CGCCAA	2																																																					2
CGCCCA	1																																																					1
CGCGAG	1																																																					1
CGCTCC	1																																																					1
CGCTGC	2																																																					2
CGGAAT	1																																																					1
CGGAGG	1																																																					1
CGGCAA	1																																																					1
CGGCAG	1																																																					1
CGGCCA	1																																																					1
CGGCCC	1																																																					1
CGGCCT	2																																																					2
CGGCTC					1																																																	1
CGGCTG	1																																																					1
CGGGAT	1																																																					1
CGGTAG	1																																																					1
CGGTCA	1																																																					1
CGGTGC	2																																																					2
CGGTGG	2																																																					2
CGTCAA	1																																																					1
CGTCAT		2																																																				2
CGTCCA	1																																																					1
CGTCGA	1																																																					1
CGTCGC	1																																																					1
CGTCTC	2																																																					2
CGTGAG			1																																																			1
CGTGAT	1																																																					1
CGTGGT	2	1																																																				3
CGTTAT	1																																																					1
CGTTCT	1																																																					1
CGTTGC	1																																																					1
CGTTGG				1																																																		1
CGTTTT	1																																																					1
CTAACA										1																																												1
CTACCA		1																																																				1
CTACCT	1																																																					1
CTATTT	1																																																					1
CTCAGC	1																																																					1
CTCAGG		1																																																				1
CTCAGT	1																																																					1
CTCATC	1																																																					1
CTCCAG	2																																																					2
CTCCGG	1																																																					1
CTCCGT	1																																																					1
CTCCTT	2																																																					2
CTCGAC	1																																																					1
CTCGCC	1																																																					1
CTCGGA	1																																																					1
CTCGTC	1																																																					1
CTCTTC	1																																																					1
CTCTTG	1																																																					1
CTCTTT	2																																																					2
CTGAAA	1																																																					1
CTGCAA	1																																																					1
CTGCAC	1																																																					1
CTGCAG	1																																																					1
CTGCAT	1																																																					1
CTGCCA	2	1																																																				3
CTGCCG	4																																																					4
CTGCCT	2																																																					2
CTGCGG	1																																																					1
CTGCTC		1																																																				1
CTGGAA	1																																																					1
CTGGAG	1																																																					1
CTGGAT		1																																																				1
CTGGCA	1																																																					1
CTGGGA	1				1																																																	2
CTGGTC	1																																																					1
CTGGTT		1																																																				1
CTGTAG	1																																																					1
CTGTCG	2																																																					2
CTGTCT	1																																																					1
CTGTGC	1																																																					1
CTGTGG	1																																																					1
CTGTTC	1																																																					1
CTGTTG	3			1																																																		4
CTGTTT		1		1																																																		2
CTTCCA	1																																																					1
CTTCGC	1																																																					1
CTTCGG	1																																																					1
CTTCGT	2																																																					2
CTTCTA	1																																																					1
CTTCTC	2	1																																																				3
CTTCTG	2																																																					2
CTTGAG	1																																																					1
CTTGGA	1																																																					1
CTTGTC	3																																																					3
CTTGTG	1																																																					1
CTTTCA	1	1																																																				2
CTTTCT	1																																																					1
CTTTTC	2		2																																																			4
CTTTTG	2	2																																																				4
CTTTTT	2																																																					2
GAAAAA	3																																																					3
GAAAAG	1	1																																																				2
GAAACA		1																																																				1
GAAACG	1																																																					1
GAAATA		1																																																				1
GAACGC	1																																																					1
GAAGAG	3	1																																																				4
GAAGCA	1																																																					1
GAAGGG	1																																																					1
GACAAC	2																																																					2
GACACC	1																																																					1
GACACT	1																																																					1
GACAGT	1																																																					1
GACATG	1																																																					1
GACCAA	1																																																					1
GACCAC	1																																																					1
GACCAT	1																																																					1
GACCCT	2																																																					2
GACCGA	1																																																					1
GACCGC	1																																																					1
GACCGG	1																																																					1
GACCGT		1																																																				1
GACCTT			1																																																			1
GACGAA	3																																																					3
GACGAG	5			1																																																		6
GACGCA	1																																																					1
GACGTA		1																																																				1
GACGTC	3																																																					3
GACTAA	1																																																					1
GACTCG	2																																																					2
GACTCT	1																																																					1
GACTGA	1																																																					1
GACTGT		1																																																				1
GAGAAA	1																																																					1
GAGAAG	1																																																					1
GAGACA	2																																																					2
GAGACC		1																																																				1
GAGATG		1																																																				1
GAGCAA		1																																																				1
GAGCAG	1																																																					1
GAGCCA	1		1																																																			2
GAGCCG		2																																																				2
GAGCCT	1																																																					1
GAGCGA	1																																																					1
GAGCGT	1																																																					1
GAGCTT	1																																																					1
GAGGAA	2																																																					2
GAGGAC	2																																																					2
GAGGCG	2																																																					2
GAGGCT	1		1																																																			2
GAGGGC	2																																																					2
GAGGGG	1																																																					1
GAGGGT	1																																																					1
GAGGTC	1																																																					1
GAGGTT	1																																																					1
GAGTAG	1																																																					1
GAGTCA	1																																																					1
GAGTCG	1																																																					1
GAGTGA		1																																																				1
GAGTGG		1																																																				1
GAGTGT	1																																																					1
GAGTTC	1																																																					1
GATCAC			1																																																			1
GATCGA	1																																																					1
GATCGT	1																																																					1
GATCTC	1																																																					1
GATGAC	2																																																					2
GATGAG			1																																																			1
GATGTC	1																																																					1
GATGTT	1	1																																																				2
GATTTC	1																																																					1
GATTTT	1																																																					1
GCAAAA						1																																																1
GCAACA	1																																																					1
GCAAGG	3																																																					3
GCAAGT	1		1																																																			2
GCAATG	2																																																					2
GCACAA		1																																																				1
GCACCA	1				1																																																	2
GCACCC	1																																																					1
GCACCG	2																																																					2
GCACCT	2																																																					2
GCACGA	1																																																					1
GCACTG	1																																																					1
GCACTT					1																																																	1
GCAGAC		1																																																				1
GCAGAT	1																																																					1
GCAGCC	2																																																					2
GCAGCG	2																																																					2
GCAGTC	1																																																					1
GCAGTT	1																																																					1
GCATAT	1																																																					1
GCCAAC	4																																																					4
GCCAAT	1																																																					1
GCCACT	1																																																					1
GCCAGA	1																																																					1
GCCAGG	1																																																					1
GCCAGT	1																																																					1
GCCATG	1																																																					1
GCCCAA	1																																																					1
GCCCAG	2																																																					2
GCCCAT	2																																																					2
GCCCCC	1																																																					1
GCCCGT	1																																																					1
GCCCTC	1																																																					1
GCCGAG	1																																																					1
GCCGAT	1																																																					1
GCCGGA	1	1	1																																																			3
GCCGTG	1																																																					1
GCCGTT	3																																																					3
GCCTCC	1																																																					1
GCCTCG	1																																																					1
GCCTCT		1																																																				1
GCCTGA			1																																																			1
GCCTGG	1	1																																																				2
GCCTGT	2																																																					2
GCCTTT	1																																																					1
GCGACA	1																																																					1
GCGACG	1																																																					1
GCGACT	1	1																																																				2
GCGCAT	1																																																					1
GCGCCG	1																																																					1
GCGGCA	4																																																					4
GCGTCG	1																																																					1
GCGTCT	1																																																					1
GCGTTG	2																																																					2
GCTCAG		1																																																				1
GCTCGA	1																																																					1
GCTCGC	1																																																					1
GCTCTC	1																																																					1
GCTGAG	1																																																					1
GCTGCA	1																																																					1
GCTGCC	6																																																					6
GCTGGA		1																																																				1
GCTGGC	1																																																					1
GCTGGG		1																																																				1
GCTGGT	1	1																																																				2
GCTGTC	1																																																					1
GCTGTT	3																																																					3
GCTTCA	2	1																																																				3
GCTTCC		1																																																				1
GCTTCT		1																																																				1
GCTTGG		1																																																				1
GCTTGT	1																																																					1
GGAAAG	1																																																					1
GGAAGT	1																																																					1
GGACGA	1																																																					1
GGAGAT	1																																																					1
GGAGCC	1																																																					1
GGATGC	1																																																					1
GGATGG	1																																																					1
GGCAAA	1																																																					1
GGCAAC		1																																																				1
GGCAAG	1																																																					1
GGCACA	1																																																					1
GGCACC	1																																																					1
GGCACT	1																																																					1
GGCAGA	1																																																					1
GGCAGC	2	1																																																				3
GGCCAC	1																																																					1
GGCCAG	2																																																					2
GGCCGA	1																																																					1
GGCCGT	2																																																					2
GGCCTG	1																																																					1
GGCGAC	1																																																					1
GGCGAG	3																																																					3
GGCGGG	1																																																					1
GGCGGT	2	1																																																				3
GGCGTA	1																																																					1
GGCTAC	1																																																					1
GGCTCC	1			1																																																		2
GGCTCG		1																																																				1
GGCTCT	1	1																																																				2
GGCTGC	1	1																																																				2
GGGAAA	1																																																					1
GGGAGA	2																																																					2
GGGATT	1																																																					1
GGGCAT	1																																																					1
GGGCGA	1																																																					1
GGGGCC	1																																																					1
GGGGTC		1	1																																																			2
GGGTCA	1																																																					1
GGGTTT	1																																																					1
GGTAAC		1																																																				1
GGTCCA	1																																																					1
GGTCCT	1																																																					1
GGTGAA	1																																																					1
GGTGCA			1																																																			1
GGTGCT	2																																																					2
GGTGGA	2																																																					2
GGTTGA	1																																																					1
GGTTGC	2																																																					2
GGTTGG	1																																																					1
GGTTGT	1																																																					1
GTACTT		1																																																				1
GTATGT		1																																																				1
GTCAAC	1																																																					1
GTCAAG		1																																																				1
GTCATC	1																																																					1
GTCCAG	1																																																					1
GTCCCA	1																																																					1
GTCCTC	1	1	1																																																			3
GTCCTG	1																																																					1
GTCCTT	1					1																																																2
GTCGAA	1																																																					1
GTCGAC	1																																																					1
GTCGCA	2																																																					2
GTCGCC	1																																																					1
GTCGCT	3																																																					3
GTCGTG	1																																																					1
GTCTGA	1																																																					1
GTCTGC	1	1																																																				2
GTCTGT	1	1																																																				2
GTCTTC	1																																																					1
GTCTTG	1																																																					1
GTGAAC	1																																																					1
GTGAAG	1																																																					1
GTGACA	1																																																					1
GTGAGA	1																																																					1
GTGCCT	1																																																					1
GTGCTC	1																																																					1
GTGCTG	1																																																					1
GTGGAC	1																																																					1
GTGGAG				1																																																		1
GTGGAT		1																																																				1
GTGGCT	1																																																					1
GTGGGT	2																																																					2
GTGGTC	1																																																					1
GTGGTT	2																																																					2
GTGTCT		1																																																				1
GTGTGA	1																																																					1
GTGTGC	1																																																					1
GTGTTA										1																																												1
GTGTTT	1																																																					1
GTTATG	1																																																					1
GTTCAG	1																																																					1
GTTGAC	2																																																					2
GTTGCC	3																																																					3
GTTGCG	1	1																																																				2
GTTGCT	3				1																																																	4
GTTGGC	1																																																					1
GTTGGT	1																																																					1
GTTTCT	1																																																					1
GTTTGA	1																																																					1
GTTTTT	1																																																					1
TAAAAA	3																																																					3
TAAAAT	1																																																					1
TAATAG	1																																																					1
TAATTC	1																																																					1
TAATTT		1																																																				1
TACGAC	1																																																					1
TACGCC	2																																																					2
TAGCCT	1																																																					1
TAGCTG	1																																																					1
TATAAA	1																																																					1
TATCAA	1																																																					1
TATCGC	1																																																					1
TATGAT	1																																																					1
TATTAC	1																																																					1
TATTTC	1																																																					1
TATTTT	1																																																					1
TCAAAA		1																																																				1
TCAAAC	1																																																					1
TCAAGT	1																																																					1
TCACAT	1																																																					1
TCACCC	1																																																					1
TCACTG	1																																																					1
TCAGAA	1																																																					1
TCAGCA	1																																																					1
TCATAC	2																																																					2
TCATCG	3																																																					3
TCATCT	1																																																					1
TCATTC		1																																																				1
TCATTG	1																																																					1
TCATTT	1																																																					1
TCCAAG	1																																																					1
TCCACC	1																																																					1
TCCATC	2	1																																																				3
TCCATT	1																																																					1
TCCCAG	1																																																					1
TCCCGG	1																																																					1
TCCCTG	1																																																					1
TCCCTT	1																																																					1
TCCGAT	1																																																					1
TCCGGC	1																																																					1
TCCGTT	1																																																					1
TCCTCA	2																																																					2
TCCTCG	5				1																																																	6
TCCTCT	1																																																					1
TCCTGC			1																																																			1
TCCTGG			1																																																			1
TCCTGT	1																																																					1
TCCTTC	3																																																					3
TCCTTG	1																																																					1
TCGAAG	1																																																					1
TCGAGA	1																																																					1
TCGATG	2																																																					2
TCGCAC	1																																																					1
TCGCCC	1																																																					1
TCGCCT	1																																																					1
TCGCTG	3																																																					3
TCGGAC	1																																																					1
TCGGAG	1																																																					1
TCGGCA	1																																																					1
TCGGGC	1																																																					1
TCGTCA	1																																																					1
TCGTCC	4																																																					4
TCGTCT	1																																																					1
TCGTTG	2																																																					2
TCTACA	1																																																					1
TCTATT	1		1																																																			2
TCTCCA		1																																																				1
TCTCCT	2																																																					2
TCTCGC	1																																																					1
TCTGAA	1																																																					1
TCTGCA	2																																																					2
TCTGCC	2																																																					2
TCTGCG				1																																																		1
TCTGCT	1																																																					1
TCTGGT				1																																																		1
TCTGTG	1																																																					1
TCTGTT	2		1																																																			3
TCTTCA	2																																																					2
TCTTCG	1																																																					1
TCTTGG	1																																																					1
TCTTTC	2																																																					2
TCTTTT	3																																																					3
TGAAGA		1																																																				1
TGACAA		1																																																				1
TGACAC	1																																																					1
TGACAG	2																																																					2
TGACCA	1																																																					1
TGACGA	1																																																					1
TGAGCC	1		1																																																			2
TGATGT	1																																																					1
TGATTT	3																																																					3
TGCAGA	1																																																					1
TGCAGC	1																																																					1
TGCATC	1	1																																																				2
TGCCAC	1																																																					1
TGCCGA	1																																																					1
TGCCGC	3	1																																																				4
TGCCGG	2																																																					2
TGCCGT		1																																																				1
TGCGAC	1			1																																																		2
TGCGGC	2																																																					2
TGCGTT										1																																												1
TGCTCC	1																																																					1
TGCTGA	1																																																					1
TGCTGT	7	4																																																				11
TGCTTC	3																																																					3
TGCTTG	2																																																					2
TGCTTT	1																																																					1
TGGAAA		1																																																				1
TGGAAG	1																																																					1
TGGACA	1																																																					1
TGGAGA	1																																																					1
TGGATG	1																																																					1
TGGCAG		1																																																				1
TGGCAT	1																																																					1
TGGCCT	1																																																					1
TGGCGA	2																																																					2
TGGCTG	1																																																					1
TGGGCC	1																																																					1
TGGGGA	1																																																					1
TGGGTG	1																																																					1
TGGTGA	2																																																					2
TGGTGC	3																																																					3
TGGTGT	1																																																					1
TGGTTG	1																																																					1
TGTATG	2																																																					2
TGTCGA	2	1	1																																																			4
TGTCGG		1																																																				1
TGTCGT	3																																																					3
TGTCTC	1																																																					1
TGTGAC	1																																																					1
TGTGAG	1																																																					1
TGTGGA	1																																																					1
TGTGGT	1	1																																																				2
TGTTAG	1							1		2																																												4
TGTTCC	1	1																																																				2
TGTTCT		1																																																				1
TGTTGA	2																																																					2
TGTTGC	7	1	2						1																																													11
TGTTGG	2	1																																																				3
TGTTTC	1																																																					1
TGTTTT			1																																																			1
TTACTC				1																																																		1
TTAGTC	2																																																					2
TTAGTG										1																																												1
TTATAT	1																																																					1
TTATCA	1																																																					1
TTATTT	3																																																					3
TTCAAA	1																																																					1
TTCAGA	1																																																					1
TTCATC	2																																																					2
TTCATG	1																																																					1
TTCCTC		2																																																				2
TTCCTG	1																																																					1
TTCCTT	1																																																					1
TTCGGG	1																																																					1
TTCGTC	1																																																					1
TTCTAT	1																																																					1
TTCTCC	1																																																					1
TTCTGA	1																																																					1
TTCTGG	1	1																																																				2
TTCTGT	3		1																																																			4
TTCTTT	3																																																					3
TTGATA	1																																																					1
TTGATC	1																																																					1
TTGATG		1																																																				1
TTGATT		1						1																																														2
TTGCAC	1																																																					1
TTGCAG	1																																																					1
TTGCAT	1																																																					1
TTGCCA	1																																																					1
TTGCCT	1																																																					1
TTGCTC	1																																																					1
TTGCTG	4																																																					4
TTGGAG	1																																																					1
TTGGCC	1																																																					1
TTGGTG	1																																																					1
TTGGTT	1																																																					1
TTGTAT	2																																																					2
TTGTCA	1																																																					1
TTGTCT	3																																																					3
TTGTTA	1																																																					1
TTGTTT	3																																																					3
TTTATT	4	1	1																																																			6
TTTCAT	1																																																					1
TTTCCC	2																																																					2
TTTCCT	3																																																					3
TTTCGT	1																																																					1
TTTCTC	2																																																					2
TTTCTT	5	1																																																				6
TTTGAA	1																																																					1
TTTGAT	4																																																					4
TTTGCG			1																																																			1
TTTGTC	1																																																					1
TTTGTT	2																																																					2
TTTTAC	2																																																					2
TTTTAT	5	1		1																																																		7
TTTTCA	1																																																					1
TTTTCC	1	1																																																				2
TTTTCT	14	1	1																																																			16
TTTTGA	1	2																																																				3
TTTTGT	2																																																					2
TTTTTA	5	2																																																				7
TTTTTC	5	1		2																																																		8
TTTTTG	5																																																					5

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	22	31	20	21	18	13	9	7	6	10	4	5	7	3	6	2	2	2	3	2	1		2	1	1	1	1	1		1	1		1			2	206
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	13	5	8	4	1	1		1								1																1					35
AC/GT	-	-	-	129	49	29	24	15	9	5	4	4	3	4		1	1																																					277
AG/CT	-	-	-	216	99	72	29	12	9	5	6	4		2	3	2	2								1																													462
AT/AT	-	-	-	46	20	14	12	4	3	1			1				1																																					102
CG/CG	-	-	-	11	1																																																	12
AAC/GTT	-	-	70	36	18	18	15	7	4	4	1	1		1		1						1	1																															178
AAG/CTT	-	-	129	39	10	4	1	1	1		1							1		1				1																														189
AAT/ATT	-	-	57	42	18	6	3	1	1		1			1																																								130
ACC/GGT	-	-	82	27	6	4	2	1																																														122
ACG/CGT	-	-	147	42	11	7	2																																															209
ACT/AGT	-	-	8	7	4			1		1			1																																									22
AGC/CTG	-	-	256	117	48	24	12	5	2	2																																												466
AGG/CCT	-	-	94	30	10	4	7	2	1																																													148
ATC/ATG	-	-	16	4	3	2		2																																														27
CCG/CGG	-	-	122	32	12	4	2	1																																														173
AAAC/GTTT	-	18	3	2		1																																																24
AAAG/CTTT	-	70	20	5	1	1		1			1						1																																					100
AAAT/ATTT	-	23	2	1																																																		26
AACC/GGTT	-		1																																																			1
AACG/CGTT	-	4		1																																																		5
AAGC/CTTG	-	4		1																																																		5
AAGG/CCTT	-	9	4																																																			13
AATC/ATTG	-	3	1		1																																																	5
AATG/ATTC	-	2	1																																																			3
AATT/AATT	-	2			1																																																	3
ACAG/CTGT	-	11	1	2					1																																													15
ACAT/ATGT	-	3	2											1																																								6
ACCC/GGGT	-	4																																																				4
ACCG/CGGT	-	1	1																																																			2
ACCT/AGGT	-	4																																																				4
ACGC/CGTG	-	4	1	1																																																		6
ACGG/CCGT	-	2																																																				2
ACGT/ACGT	-	1																																																				1
ACTC/AGTG	-	3				1																																																4
ACTG/AGTC	-	1																																																				1
AGAT/ATCT	-	3																																																				3
AGCC/CTGG	-	10	3	1																																																		14
AGCG/CGCT	-	3	1																																																			4
AGGC/CCTG	-	1	1			1																																																3
AGGG/CCCT	-	7	2																																																			9
ATCC/ATGG	-	5																																																				5
ATGC/ATGC	-		1																																																			1
CCCG/CGGG	-	2																																																				2
CCGG/CCGG	-	5																																																				5
AAAAC/GTTTT	71	11	6																																																			88
AAAAG/CTTTT	266	33	7	3		1						1	2																																									313
AAAAT/ATTTT	124	13	1		1					1																																												140
AAACC/GGTTT	3																																																					3
AAACG/CGTTT	29	3					1																																															33
AAACT/AGTTT	1																																																					1
AAAGC/CTTTG	12	2	1																																																			15
AAAGG/CCTTT	35	1																																																				36
AAAGT/ACTTT	5																																																					5
AAATC/ATTTG	12	2																																																				14
AAATG/ATTTC	9																																																					9
AAATT/AATTT	3		1																																																			4
AACAC/GTGTT	14	1																																																				15
AACAG/CTGTT	10	1								1																																												12
AACAT/ATGTT	3																																																					3
AACCC/GGGTT	1																																																					1
AACCG/CGGTT	3																																																					3
AACGC/CGTTG	6	2																																																				8
AACGG/CCGTT	3																																																					3
AACTC/AGTTG	6																																																					6
AACTG/AGTTC	1																																																					1
AAGAC/CTTGT	15			1																																																		16
AAGAG/CTCTT	51	8																																																				59
AAGAT/ATCTT	2																																																					2
AAGCC/CTTGG	6																																																					6
AAGCG/CGCTT	6																																																					6
AAGGC/CCTTG	13	1																																																				14
AAGGG/CCCTT	10	1																																																				11
AAGGT/ACCTT	1																																																					1
AAGTC/ACTTG	5																																																					5
AAGTG/ACTTC	2																																																					2
AATAC/ATTGT	1	1	1																																																			3
AATAG/ATTCT	3																																																					3
AATAT/ATATT	2	1																																																				3
AATCC/ATTGG	2																																																					2
AATCG/ATTCG	3																																																					3
AATCT/AGATT	2																																																					2
AATGC/ATTGC	5	1																																																				6
AATGG/ATTCC	1																																																					1
AATTC/AATTG	3	1																																																				4
ACACC/GGTGT	11	1																																																				12
ACACG/CGTGT	11			1																																																		12
ACACT/AGTGT	1	1																																																				2
ACAGC/CTGTG	8																																																					8
ACAGG/CCTGT	7	3																																																				10
ACAGT/ACTGT	1																																																					1
ACATC/ATGTG	8	3			1																																																	12
ACATG/ATGTC	2																																																					2
ACCAG/CTGGT	12	2																																																				14
ACCAT/ATGGT	4	1																																																				5
ACCCC/GGGGT	1																																																					1
ACCCT/AGGGT	1																																																					1
ACCGG/CCGGT	1																																																					1
ACCTC/AGGTG	7	1																																																				8
ACCTG/AGGTC	1																																																					1
ACGAG/CGTCT	8								1																																													9
ACGAT/ATCGT	4																																																					4
ACGCC/CGTGG	3																																																					3
ACGCG/CGCGT	3																																																					3
ACGCT/AGCGT	1																																																					1
ACGGC/CCGTG	1	1																																																				2
ACGTC/ACGTG	3																																																					3
ACTAT/AGTAT	1																																																					1
ACTCC/AGTGG	3																																																					3
ACTCG/AGTCG	8	2																																																				10
ACTCT/AGAGT	2																																																					2
ACTGC/AGTGC	4																																																					4
ACTGG/AGTCC	8	3																																																				11
AGAGC/CTCTG	6																																																					6
AGAGG/CCTCT	30	3																																																				33
AGATC/ATCTG	3																																																					3
AGATG/ATCTC	13	3	1																																																			17
AGCAT/ATGCT	1																																																					1
AGCCC/CTGGG	11																																																					11
AGCGC/CGCTG	4																																																					4
AGCGG/CCGCT	1																																																					1
AGCTC/AGCTG	4																																																					4
AGGAT/ATCCT	2																																																					2
AGGCC/CCTGG	47	11																																																				58
AGGCG/CCTCG	10	2																																																				12
AGGGC/CCCTG	4							1																																														5
AGGGG/CCCCT	11	2																																																				13
ATCCC/ATGGG	7	2																																																				9
ATCGC/ATGCG	11	6	1																																																			18
ATGCC/ATGGC	3																																																					3
CCCCG/CGGGG	1																																																					1
CCCGG/CCGGG	1																																																					1
CCGCG/CGCGG	2																																																					2
AAAAAC/GTTTTT	24	4	3																																																			31
AAAAAG/CTTTTT	80	10	2	2			2			1	1																																											98
AAAAAT/ATTTTT	35	5	2	1																																																		43
AAAACC/GGTTTT	8	1																																																				9
AAAACG/CGTTTT	4																																																					4
AAAACT/AGTTTT	2																																																					2
AAAAGC/CTTTTG	7	4				1																																																12
AAAAGG/CCTTTT	9	2	2	1																																																		14
AAAAGT/ACTTTT	3																																																					3
AAAATC/ATTTTG	14	5			1			1																																														21
AAAATG/ATTTTC	6	1	1				1																																															9
AAAATT/AATTTT	2	1																																																				3
AAACAC/GTGTTT	2																																																					2
AAACAG/CTGTTT	10	2	2	1																																																		15
AAACCC/GGGTTT	1																																																					1
AAACGC/CGTTTG		1	1							1																																												3
AAACGG/CCGTTT	3																																																					3
AAACTC/AGTTTG	2																																																					2
AAACTG/AGTTTC	1																																																					1
AAAGAC/CTTTGT	5																																																					5
AAAGAG/CTCTTT	13	1																																																				14
AAAGCC/CTTTGG	2							1																																														3
AAAGCG/CGCTTT	1																																																					1
AAAGGC/CCTTTG	5		1																																																			6
AAAGGG/CCCTTT	6																																																					6
AAAGTG/ACTTTC	1	1																																																				2
AAATAC/ATTTGT	5		1																																																			6
AAATAG/ATTTCT	4	1	1																																																			6
AAATAT/ATATTT	2																																																					2
AAATCC/ATTTGG	2																																																					2
AAATCG/ATTTCG	4	1																																																				5
AAATGC/ATTTGC	6																																																					6
AAATGG/ATTTCC	3	1																																																				4
AAATTC/AATTTG	2																																																					2
AACAAG/CTTGTT	2	2																																																				4
AACAAT/ATTGTT	2																																																					2
AACACC/GGTGTT	8	1																																																				9
AACACG/CGTGTT	1																																																					1
AACACT/AGTGTT	1							1		7						1																																						10
AACAGC/CTGTTG	47	11	4	2	1				1																																													66
AACAGG/CCTGTT	5	1																																																				6
AACATC/ATGTTG	9	2																																																				11
AACATG/ATGTTC	2																																																					2
AACCAC/GGTTGT	10	3	1					1																																														15
AACCAG/CTGGTT	5	2		1																																																		8
AACCAT/ATGGTT	2																																																					2
AACCCC/GGGGTT	1																																																					1
AACCCG/CGGGTT	1																																																					1
AACCGC/CGGTTG	4	1	1																																																			6
AACCTC/AGGTTG	4																																																					4
AACCTG/AGGTTC	5																																																					5
AACCTT/AAGGTT	1																																																					1
AACGAC/CGTTGT	11	1																																																				12
AACGAG/CGTTCT	2																																																					2
AACGAT/ATCGTT	1	1																																																				2
AACGCC/CGTTGG	9	1		1																																																		11
AACGCG/CGCGTT	1																																																					1
AACGGC/CCGTTG	12	3																																																				15
AACGGT/ACCGTT	1	1																																																				2
AACGTC/ACGTTG	5																																																					5
AACGTG/ACGTTC	1																																																					1
AACTAC/AGTTGT	1																																																					1
AACTCC/AGTTGG	1																																																					1
AACTCG/AGTTCG	1																																																					1
AACTGC/AGTTGC	5																																																					5
AACTGG/AGTTCC	2																																																					2
AACTTC/AAGTTG	1																																																					1
AACTTG/AAGTTC	1																																																					1
AAGACC/CTTGGT	5	2																																																				7
AAGACG/CGTCTT	10																																																					10
AAGACT/AGTCTT	4																																																					4
AAGAGC/CTCTTG	3	2																																																				5
AAGAGG/CCTCTT	11	5																																																				16
AAGAGT/ACTCTT				1																																																		1
AAGATC/ATCTTG	1																																																					1
AAGATG/ATCTTC	7	1																																																				8
AAGCAC/CTTGTG	7	1																																																				8
AAGCAG/CTGCTT	9	2																																																				11
AAGCCC/CTTGGG	4	1																																																				5
AAGCCG/CGGCTT	2																																																					2
AAGCGG/CCGCTT	1	1																																																				2
AAGCTC/AGCTTG	2																																																					2
AAGCTG/AGCTTC	2	1																																																				3
AAGGAC/CCTTGT	7					1																																																8
AAGGAG/CCTTCT	18	1		1																																																		20
AAGGCC/CCTTGG	7																																																					7
AAGGCG/CCTTCG	3																																																					3
AAGGCT/AGCCTT	1																																																					1
AAGGGC/CCCTTG	7		1																																																			8
AAGGGG/CCCCTT	5																																																					5
AAGGTC/ACCTTG		1	1																																																			2
AAGGTG/ACCTTC	2	1																																																				3
AAGTAC/ACTTGT		1																																																				1
AAGTAG/ACTTCT	1																																																					1
AAGTCC/ACTTGG	3																																																					3
AAGTCG/ACTTCG	2																																																					2
AAGTGC/ACTTGC	2		1		1																																																	4
AAGTGG/ACTTCC	5																																																					5
AATAGG/ATTCCT	1																																																					1
AATAGT/ACTATT	2																																																					2
AATATC/ATATTG	3																																																					3
AATATT/AATATT	1																																																					1
AATCAC/ATTGTG	1																																																					1
AATCAG/ATTCTG	3		1																																																			4
AATCAT/ATGATT	2			1																																																		3
AATCCC/ATTGGG	1																																																					1
AATCGG/ATTCCG	2																																																					2
AATCTG/AGATTC	2																																																					2
AATGAC/ATTGTC	3	1																																																				4
AATGAG/ATTCTC	1	1																																																				2
AATGAT/ATCATT	1	1																																																				2
AATGCC/ATTGGC	4																																																					4
AATGCG/ATTCGC	2																																																					2
AATGGC/ATTGCC	4																																																					4
AATGGT/ACCATT	1																																																					1
AATGTC/ACATTG			1																																																			1
AATGTG/ACATTC	3	1																																																				4
AATTAG/AATTCT	1																																																					1
AATTCC/AATTGG	1																																																					1
ACACAG/CTGTGT	2	2																																																				4
ACACAT/ATGTGT	4	1																																																				5
ACACCC/GGGTGT	4																																																					4
ACACCG/CGGTGT	3	1																																																				4
ACACCT/AGGTGT		1																																																				1
ACACGC/CGTGTG	4	1																																																				5
ACACTC/AGTGTG	3	1																																																				4
ACACTG/AGTGTC	2																																																					2
ACAGAG/CTCTGT	6	2																																																				8
ACAGAT/ATCTGT	2																																																					2
ACAGCC/CTGTGG	4	1																																																				5
ACAGCG/CGCTGT	11																																																					11
ACAGCT/AGCTGT	3																																																					3
ACAGGC/CCTGTG	8	1																																																				9
ACAGGG/CCCTGT	1																																																					1
ACAGGT/ACCTGT	1																																																					1
ACAGTC/ACTGTG	2	2																																																				4
ACAGTG/ACTGTC	5																																																					5
ACATAT/ATATGT		1																																																				1
ACATCC/ATGTGG	2	1																																																				3
ACATCG/ATGTCG	8	1	1			1																																																11
ACATCT/AGATGT	1																																																					1
ACATGC/ATGTGC	3																																																					3
ACATGG/ATGTCC	4																																																					4
ACCACG/CGTGGT	6	4																																																				10
ACCACT/AGTGGT	1	1																																																				2
ACCAGC/CTGGTG	11	1	1		2				1																																													16
ACCAGG/CCTGGT	4		1																																																			5
ACCATC/ATGGTG	2	1																																																				3
ACCATG/ATGGTC	2																																																					2
ACCCAG/CTGGGT	1																																																					1
ACCCAT/ATGGGT	1																																																					1
ACCCCG/CGGGGT	1	1	1																																																			3
ACCCGC/CGGGTG	1																																																					1
ACCCGT/ACGGGT		1																																																				1
ACCCTC/AGGGTG	3																																																					3
ACCCTG/AGGGTC	3																																																					3
ACCGAG/CGGTCT	4	1																																																				5
ACCGCC/CGGTGG	9	1																																																				10
ACCGCG/CGCGGT	2	1																																																				3
ACCGCT/AGCGGT	1																																																					1
ACCGGC/CCGGTG	10																																																					10
ACCGGG/CCCGGT	2																																																					2
ACCGTG/ACGGTC	3	1																																																				4
ACCTCC/AGGTGG	9			1																																																		10
ACCTCG/AGGTCG	7	1																																																				8
ACCTCT/AGAGGT	1																																																					1
ACCTGC/AGGTGC	3		1																																																			4
ACCTGG/AGGTCC	3																																																					3
ACGACT/AGTCGT	3																																																					3
ACGAGC/CGTGCT	4																																																					4
ACGAGG/CCTCGT	23	1	2	1	1																																																	28
ACGATC/ATCGTG	3		1																																																			4
ACGATG/ATCGTC	9	2																																																				11
ACGCAG/CGTCTG	5	2		1																																																		8
ACGCAT/ATGCGT	1																																																					1
ACGCCC/CGTGGG	1																																																					1
ACGCCG/CGGCGT	1																																																					1
ACGCCT/AGGCGT	3																																																					3
ACGCTC/AGCGTG	1		1																																																			2
ACGGAG/CCGTCT	4																																																					4
ACGGCC/CCGTGG	8		1																																																			9
ACGGCG/CCGTCG	5																																																					5
ACGGCT/AGCCGT	1																																																					1
ACGGGC/CCCGTG	1																																																					1
ACGTAG/ACGTCT		1																																																				1
ACGTCC/ACGTGG	2																																																					2
ACGTCG/ACGTCG	5																																																					5
ACTCAG/AGTCTG	1																																																					1
ACTCAT/AGTATG	3																																																					3
ACTCCC/AGTGGG		1																																																				1
ACTCCG/AGTCGG	3	1																																																				4
ACTCCT/AGGAGT	1																																																					1
ACTCGC/AGTGCG	1																																																					1
ACTCGG/AGTCCG	4																																																					4
ACTCTC/AGAGTG	2	1																																																				3
ACTCTG/AGAGTC	3																																																					3
ACTGAG/AGTCTC	4																																																					4
ACTGCC/AGTGGC	6	4																																																				10
ACTGCG/AGTCGC	7	1		1																																																		9
ACTGGC/AGTGCC	6																																																					6
ACTGGG/AGTCCC	4				1																																																	5
AGAGCC/CTCTGG	5	1	1	1																																																		8
AGAGCG/CGCTCT	4																																																					4
AGAGGC/CCTCTG	6	1																																																				7
AGAGGG/CCCTCT	3	2																																																				5
AGATCC/ATCTGG		2																																																				2
AGATCG/ATCTCG	4																																																					4
AGATGC/ATCTGC	7	1																																																				8
AGATGG/ATCTCC	6	3																																																				9
AGCAGG/CCTGCT	4	1	1																																																			6
AGCATC/ATGCTG	2																																																					2
AGCCCC/CTGGGG		1																																																				1
AGCCCG/CGGGCT	1	2																																																				3
AGCCGC/CGGCTG	9	2																																																				11
AGCCGG/CCGGCT	6	3	1	1	1																																																	12
AGCCTC/AGGCTG	3	2	1																																																			6
AGCCTG/AGGCTC	3	2	2																																																			7
AGCGAT/ATCGCT	1																																																					1
AGCGCC/CGCTGG	4																																																					4
AGCGCG/CGCGCT	2																																																					2
AGCGGC/CCGCTG	29	2																																																				31
AGCGGG/CCCGCT	2																																																					2
AGCTCC/AGCTGG	6	1																																																				7
AGCTCG/AGCTCG	2																																																					2
AGCTGC/AGCTGC	3																																																					3
AGGATG/ATCCTC	5		1																																																			6
AGGCCC/CCTGGG	6	1																																																				7
AGGCCG/CCTCGG	6																																																					6
AGGCGG/CCGCCT	4																																																					4
AGGGCC/CCCTGG	6	1	1																																																			8
AGGGCG/CCCTCG	10	1		1																																																		12
AGGGGG/CCCCCT	1																																																					1
ATATGC/ATATGC	1																																																					1
ATCCCC/ATGGGG	3																																																					3
ATCCCG/ATCGGG	1																																																					1
ATCCGC/ATGCGG	1																																																					1
ATCGCC/ATGGCG	2																																																					2
ATCGGC/ATGCCG	3			1																																																		4
ATGCCC/ATGGGC	5																																																					5
ATGCGC/ATGCGC	1																																																					1
ATGGCC/ATGGCC	2																																																					2
CCCCCG/CGGGGG	2																																																					2
CCCCGG/CCGGGG	2																																																					2
CCCGCG/CGCGGG	1																																																					1
CCGGCG/CCGGCG	2																																																					2
