Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-15/megassr/results/hub_GCA_039268055.1/fasta/hub_GCA_039268055.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              84
Total size of examined sequences (bp):           37760858
Total number of identified SSRs:                 3695
Number of SSR containing sequences:              39
Number of sequences containing more than 1 SSR:  36
Number of SSRs present in compound formation:    328


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	467
2	744
3	563
4	393
5	906
6	622

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	11	20	17	14	19	19	15	13	13	9	8	4	2	4	1	1			2	3	3	1	3	2	2	2			2			1	1			1		1																																											194
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	3	6	4		3	4		1		1									1						1						1				1																																													30
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	5	2	3	2	2			1																				1						1		2						1	1														1		1		1											1								28
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	28	13	11	6	19	12	6	16	15	10	9	5	4	2	2	2	3	4	8	3	3	1	2	3	2		2	4		2	2	1	1	1		2	1	1	1					1						2		1	1													1	1													1	215
AC	-	-	-	4	6	2	1	3		1	1	1			2		1							1															1																																																											24
AG	-	-	-	31	12	9	6	5	7	4	2	2	2	2			1			1	2																																																																													86
AT	-	-	-	87	29	15	12	9	7	2	2	3	2																																																																																					168
CA	-	-	-	11	5	4								1			1			1																																																																														23
CT	-	-	-	24	9	7	5	1	2		1	2																	1																																																																					52
GA	-	-	-	16	7	9	6	2		1		2				1		1	1																																																																															46
GC	-	-	-	2																																																																																														2
GT	-	-	-	10	7	1	2	3	1		1	1					1																1															1																																																		29
TA	-	-	-	115	40	17	13	7	6	3	4	2																																																																																						207
TC	-	-	-	28	17	10	11	2	2	3	1	1	1	3	1																																																																																			80
TG	-	-	-	10	5	3	2	1				1	3		1		1																																																																																	27
AAC	-	-	2	1		1																																																																																												4
AAG	-	-	10	3	3	1		2	1	1																																																																																								21
AAT	-	-	11	6	3	3	1	1	1	1																																																																																								27
ACA	-	-	1	2							1											1																																																																												5
ACC	-	-	5	1	1																																																																																													7
ACG	-	-	1	1																																																																																														2
ACT	-	-	3	2		1		1																																																																																										7
AGA	-	-	8	5	5	1		1						1																																																																																				21
AGC	-	-	2	2	1	1																																																																																												6
AGG	-	-	2	2			1	1																																																																																										6
AGT	-	-	2		1				1					1																1																																																																				6
ATA	-	-	12	8	1	3		1										1											1		1																																																																			28
ATC	-	-	2				1																																																																																											3
ATG	-	-	2	2	1				1																																																																																									6
ATT	-	-	9	3	1						2																				1																																																																			16
CAA	-	-	3	6	1	2																																																																																												12
CAC	-	-	4	3		1																																																																																												8
CAG	-	-	6	2		3	1			1																																																																																								13
CAT	-	-	5	1	1																																																																																													7
CCA	-	-	3		2																																																																																													5
CCG	-	-	2	1																																																																																														3
CCT	-	-	1		1																																																																																													2
CGA	-	-	1																																																																																															1
CGC	-	-	1																																																																																															1
CGG	-	-	2			1																																																																																												3
CGT	-	-	4																																																																																															4
CTA	-	-	4	1											1																																																																																			6
CTC	-	-	6	2																																																																																														8
CTG	-	-	5	3		1																																																																																												9
CTT	-	-	17	4		2		1	1																																																																																									25
GAA	-	-	11	4	3	1			2	1																					1																																																																			23
GAC	-	-	3			1																																																																																												4
GAG	-	-	2	2	1		1				1				1																																																																																			8
GAT	-	-	9		1																																																																																													10
GCA	-	-	5	3	2																																																																																													10
GCC	-	-	10	2																																																																																														12
GCG	-	-	2		1																																																																																													3
GCT	-	-	1	1																																																																																														2
GGA	-	-	4	2	1																																																																																													7
GGC	-	-	4	1																																																																																														5
GGT	-	-	3	1																																																																																														4
GTA	-	-	1																																																																																															1
GTC	-	-	1																																																																																															1
GTG	-	-	4																																																																																															4
GTT	-	-	6	2		1																																																																																												9
TAA	-	-	14	3	2	1			1																						1																																																																			22
TAC	-	-		4		1																						1																																																																						6
TAG	-	-	1		1	2		1		1									1																																																																															7
TAT	-	-	10	6	3	1	1		1																																																																																									22
TCA	-	-	9	1	1	1		1																																																																																										13
TCC	-	-	2					2																		1																																																																								5
TCG	-	-	2	1			1																																																																																											4
TCT	-	-	7	2				1		1	1							1					1																																																																											14
TGA	-	-	4	3																																																																																														7
TGC	-	-	1	4	1	2				1																																																																																								9
TGG	-	-	3	3	2		1																																																																																											9
TGT	-	-	5	1	1		1																																																																																											8
TTA	-	-	17	7	4	2																																																																																												30
TTC	-	-	7	5	3	3	1			2	1	1	1																																																																																					24
TTG	-	-	4	2		1							1																																																																																					8
AAAC	-	1																																																																																																1
AAAG	-	13	6	4	1	1	1	1			1																																																																																							28
AAAT	-	19	5	1																																																																																														25
AAGA	-	3	3	1																																																																																														7
AAGG	-	1																																																																																																1
AATA	-	3		3																																																																																														6
AATC	-	4		1		1																																																																																												6
AATG	-	1		1																																																																																														2
AATT	-	12	1			1																																																																																												14
ACAT	-	4	1	1	1																																																																																													7
ACCG	-	1																																																																																																1
AGAA	-	5	1							1																																																																																								7
AGAC	-			1																																																																																														1
AGCA	-	1																																																																																																1
AGGG	-	1																																																																																																1
AGTT	-	1																																																																																																1
ATAA	-	10	3																																																																																															13
ATAC	-	5		3																																																																																														8
ATAG	-	2																																																																																																2
ATCA	-	3	1																																																																																															4
ATCT	-	1																																																																																																1
ATGA	-	2		1																																																																																														3
ATGT	-	3	1																																																																																															4
ATTA	-	4		1																																																																																														5
ATTC	-		1																																																																																															1
ATTG	-	1		1																																																																																														2
ATTT	-	7	4		1																																																																																													12
CAAA	-	1																																																																																																1
CAAG	-	1																																																																																																1
CACT	-	2																																																																																																2
CAGT	-	1																																																																																																1
CATA	-	2	1	1				1																																																																																										5
CATC	-	2																																																																																																2
CCAT	-	1																																																																																																1
CCTA	-	2																																																																																																2
CTAC	-	1		1																																																																																														2
CTAT	-	1	1																																																																																															2
CTCA	-	1																																																																																																1
CTGC	-	1																																																																																																1
CTTT	-	2	4	1														1																																																																																8
GAAA	-	4	2	1			1																																																																																											8
GAAG	-	1																																																																																																1
GACT	-	1																																																																																																1
GAGC	-	1																																																																																																1
GAGG	-	1																																																																																																1
GAGT	-	1		1																																																																																														2
GATA	-	1																																																																																																1
GATT	-	1																																																																																																1
GGAG	-	1																																																																																																1
GGAT	-	1																																																																																																1
GGTT	-			1																																																																																														1
GTAT	-	3	1																																																																																															4
GTCT	-		1																																																																																															1
GTGA	-	2																																																																																																2
TAAA	-	10																																																																																																10
TAAC	-		1																																																																																															1
TAAT	-	3																																																																																																3
TACA	-	9	2	1	1																																																																																													13
TACT	-	1																																																																																																1
TAGA	-	2																																																																																																2
TAGC	-	1																																																																																																1
TAGG	-						1																																																																																											1
TATC	-				1																																																																																													1
TATG	-	3	1	1	1																																																																																													6
TATT	-	5																																																																																																5
TCAA	-	2	1	1	1																																																																																													5
TCAC	-	3																																																																																																3
TCAT	-	2																																																																																																2
TCCA	-	2																																																																																																2
TCCT	-		1																																																																																															1
TCTA	-	1	2																																																																																															3
TCTG	-		1																																																																																															1
TCTT	-	9				1																																																																																												10
TGAA	-	3																																																																																																3
TGAC	-	1																																																																																																1
TGAG	-	1																																																																																																1
TGAT	-	1	2																																																																																															3
TGCA	-	1																																																																																																1
TGTA	-	4	2		1																																																																																													7
TTAA	-	3																																																																																																3
TTAT	-	7																																																																																																7
TTCA	-	1																																																																																																1
TTCC	-	1	1																																																																																															2
TTCT	-	6	2	1																																																																																														9
TTGA	-	4	1	1																																																																																														6
TTGG	-	1																																																																																																1
TTTA	-	16	3	1	2	1																																																																																												23
TTTC	-	17	9	6	1		1				1																																																																																							35
AAAAC	4																																																																																																	4
AAAAG	36	14	3		2		1																																																																																											56
AAAAT	27	11	1			1								1																																																																																				41
AAAGA	20	3	1																																																																																															24
AAAGG	4																																																																																																	4
AAAGT	1																																																																																																	1
AAATA	13	4																																																																																																17
AAATC	1		1																																																																																															2
AAATG	1																																																																																																	1
AAATT	7																																																																																																	7
AACAA	1																																																																																																	1
AACTA	1																																																																																																	1
AAGAA	10	5	1																																																																																															16
AAGAG	1		1																																																																																															2
AAGGA	2																																																																																																	2
AAGTA	1																																																																																																	1
AAGTC	1																																																																																																	1
AAGTG	1																																																																																																	1
AATAA	13																																																																																																	13
AATAC	1																																																																																																	1
AATAT	5	1																																																																																																6
AATCC	1																																																																																																	1
AATCT	1																																																																																																	1
AATTA	6																																																																																																	6
AATTC		1																																																																																																1
AATTG	1																																																																																																	1
AATTT	4																																																																																																	4
ACAAA	1																																																																																																	1
ACAAC	1																																																																																																	1
ACAGC	1																																																																																																	1
ACAGG	1																																																																																																	1
ACAGT	1																																																																																																	1
ACATC	1																																																																																																	1
ACATG	1																																																																																																	1
ACCAG	1																																																																																																	1
ACCTA	1																																																																																																	1
ACCTG	1																																																																																																	1
ACGAG	1																																																																																																	1
ACGCA	1																																																																																																	1
ACTAG	1																																																																																																	1
ACTGG		1																																																																																																1
AGAAA	16	3	2																																																																																															21
AGAAG	4	1																																																																																																5
AGACA	1																																																																																																	1
AGACT		1																																																																																																1
AGAGA	1																																																																																																	1
AGAGC	1																																																																																																	1
AGAGG	1																																																																																																	1
AGATG	2	1																																																																																																3
AGATT	1																																																																																																	1
AGCAA		1																																																																																																1
AGCCA	1																																																																																																	1
AGCCC	1																																																																																																	1
AGCTA	1																																																																																																	1
AGGAA	2																																																																																																	2
AGGAG	1																																																																																																	1
AGGAT	1																																																																																																	1
AGGCA	1																																																																																																	1
AGGGA	1																																																																																																	1
AGGGC	1																																																																																																	1
AGGTG	1																																																																																																	1
AGTAC	1																																																																																																	1
AGTAG	1																																																																																																	1
AGTCA	1																																																																																																	1
ATAAA	15	1																																																																																																16
ATAAG	1																																																																																																	1
ATAAT	5																																																																																																	5
ATACC	1																																																																																																	1
ATAGA		1																																																																																																1
ATAGG	1																																																																																																	1
ATAGT	1																																																																																																	1
ATATA	3																																																																																																	3
ATATT	4																																																																																																	4
ATCAC	1																																																																																																	1
ATCAT	1																																																																																																	1
ATCCA	1																																																																																																	1
ATCCC	1																																																																																																	1
ATCCT	2																																																																																																	2
ATCTC	1	1																																																																																																2
ATGAG	2																																																																																																	2
ATGAT	1																																																																																																	1
ATGCA	1	1																																																																																																2
ATGGG	1	1																																																																																																2
ATGTA	1																																																																																																	1
ATGTC	1																																																																																																	1
ATTAA	13		1																																																																																															14
ATTAT	2																																																																																																	2
ATTGC	1																																																																																																	1
ATTTA	3																																																																																																	3
ATTTC	1																																																																																																	1
ATTTT	10		2			1																																																																																												13
CAAAA	1																																																																																																	1
CAAAG	1																																																																																																	1
CAAAT	2																																																																																																	2
CAACA	1																																																																																																	1
CAAGA		1																																																																																																1
CAAGT	1																																																																																																	1
CACGG	1																																																																																																	1
CAGTA	1																																																																																																	1
CATAC	1																																																																																																	1
CATAG	1																																																																																																	1
CATAT	1																																																																																																	1
CATGT	1																																																																																																	1
CATTC	1																																																																																																	1
CATTT	1																																																																																																	1
CCACG	1																																																																																																	1
CCATT	1	1																																																																																																2
CCCAA	1																																																																																																	1
CCCAT	1																																																																																																	1
CCCCT	3																																																																																																	3
CCCGA	1																																																																																																	1
CCCTC	1																																																																																																	1
CCCTT	2																																																																																																	2
CCGTA	1																																																																																																	1
CCGTC		1																																																																																																1
CCTCT	1																																																																																																	1
CCTTT	3																																																																																																	3
CGACA	1																																																																																																	1
CGATA	1																																																																																																	1
CGCCT	1																																																																																																	1
CGGCT	1																																																																																																	1
CGTCT		1																																																																																																1
CGTTG	1																																																																																																	1
CTAAA	1																																																																																																	1
CTACA		1																																																																																																1
CTATT	1																																																																																																	1
CTCAG	1																																																																																																	1
CTCAT	1																																																																																																	1
CTGAA	1																																																																																																	1
CTGAT		1																																																																																																1
CTTAC	1																																																																																																	1
CTTCC	2	1																																																																																																3
CTTCT	1																																																																																																	1
CTTTC	2																																																																																																	2
CTTTG	2																																																																																																	2
CTTTT	16	5	2		1																																																																																													24
GAAAA	19	4																																																																																																23
GAAAG	3																																																																																																	3
GAAAT	2		1																																																																																															3
GAACC	1																																																																																																	1
GAAGA	1																																																																																																	1
GAAGG	2																																																																																																	2
GAATT	2																																																																																																	2
GACTT	1																																																																																																	1
GAGAA	1																																																																																																	1
GAGAT	1																																																																																																	1
GAGGA	2																																																																																																	2
GAGGC	1																																																																																																	1
GAGGG	2	1																																																																																																3
GATAA	1																																																																																																	1
GATGG	1																																																																																																	1
GATTG	1																																																																																																	1
GCATC	1																																																																																																	1
GCTCA	1																																																																																																	1
GCTGA	2																																																																																																	2
GGAAA	3																																																																																																	3
GGACA	1																																																																																																	1
GGACC	1																																																																																																	1
GGAGA	1																																																																																																	1
GGAGC	1																																																																																																	1
GGATT	1																																																																																																	1
GGCTC	1																																																																																																	1
GGCTG	1																																																																																																	1
GGGAA	1																																																																																																	1
GGGAC	1	1																																																																																																2
GGGAG	1																																																																																																	1
GGGAT	1																																																																																																	1
GGGGT	1																																																																																																	1
GGGTG	2																																																																																																	2
GGGTT	1																																																																																																	1
GGTAG	1	1																																																																																																2
GGTAT	2																																																																																																	2
GGTGT	1																																																																																																	1
GGTTA		1																																																																																																1
GGTTC	1																																																																																																	1
GGTTG	1																																																																																																	1
GGTTT	1																																																																																																	1
GTACA	1																																																																																																	1
GTACT	1																																																																																																	1
GTATG	2																																																																																																	2
GTATT	1																																																																																																	1
GTCGA		1																																																																																																1
GTCTA	2																																																																																																	2
GTCTC	1																																																																																																	1
GTCTG	1																																																																																																	1
GTCTT	1																																																																																																	1
GTGTA	1																																																																																																	1
GTGTG	1																																																																																																	1
GTTGG	2																																																																																																	2
GTTGT	2																																																																																																	2
GTTTG	1																																																																																																	1
GTTTT	1																																																																																																	1
TAAAA	5		2																																																																																															7
TAAAC	1																																																																																																	1
TAAAT	5	1																																																																																																6
TAACC	2																																																																																																	2
TAATA	2																																																																																																	2
TAATG		1																																																																																																1
TAATT	5																																																																																																	5
TACAG	2																																																																																																	2
TACCG		1																																																																																																1
TACGG	2																																																																																																	2
TACTA	1																																																																																																	1
TAGAT	1																																																																																																	1
TAGCA	1																																																																																																	1
TAGTA	1																																																																																																	1
TAGTC	1																																																																																																	1
TAGTT	1																																																																																																	1
TATAA	5																																																																																																	5
TATAT	1																																																																																																	1
TATCA	1																																																																																																	1
TATGG	1																																																																																																	1
TATTA	4																																																																																																	4
TATTG	1																																																																																																	1
TATTT	15	1		1																																																																																														17
TCAAC	1																																																																																																	1
TCACA	1																																																																																																	1
TCAGC	1																																																																																																	1
TCATA	1																																																																																																	1
TCATC	2	1																																																																																																3
TCATT	1	1																																																																																																2
TCCCC	1																																																																																																	1
TCCTC	1																																																																																																	1
TCCTG	1																																																																																																	1
TCCTT	1																																																																																																	1
TCGCC		1																																																																																																1
TCGGT	1																																																																																																	1
TCGTG	1																																																																																																	1
TCGTT		1																																																																																																1
TCTAG	1																																																																																																	1
TCTAT	1																																																																																																	1
TCTCT	2																																																																																																	2
TCTTA	1																																																																																																	1
TCTTC	3																																																																																																	3
TCTTG	1																																																																																																	1
TCTTT	5	1																																																																																																6
TGAAA	1																																																																																																	1
TGACA		1																																																																																																1
TGAGA	1																																																																																																	1
TGAGC	1																																																																																																	1
TGATA	2																																																																																																	2
TGATC		1																																																																																																1
TGATT	2																																																																																																	2
TGCAT	1																																																																																																	1
TGGAG	1																																																																																																	1
TGGGT	3																																																																																																	3
TGTAC	2																																																																																																	2
TGTCA	1																																																																																																	1
TGTCT	1																																																																																																	1
TGTGA	2																																																																																																	2
TGTGT	1																																																																																																	1
TGTTA	1																																																																																																	1
TGTTG	1																																																																																																	1
TGTTT	3	1																																																																																																4
TTAAA	3																																																																																																	3
TTAAT	8																																																																																																	8
TTATA	2																																																																																																	2
TTATT	8	2																																																																																																10
TTCAT	2																																																																																																	2
TTCCA	1																																																																																																	1
TTCCC	2																																																																																																	2
TTCCT	2																																																																																																	2
TTCTC	1																																																																																																	1
TTCTT	15	5	2																																																																																															22
TTGAA	2																																																																																																	2
TTGAG	1																																																																																																	1
TTGCA	1	1																																																																																																2
TTGGA	1																																																																																																	1
TTGGG	1																																																																																																	1
TTGGT	2																																																																																																	2
TTGTA	1																																																																																																	1
TTGTT	1																																																																																																	1
TTTAA	7																																																																																																	7
TTTAG	2																																																																																																	2
TTTAT	18	4																																																																																																22
TTTCA	2																																																																																																	2
TTTCC	5																																																																																																	5
TTTCG	1																																																																																																	1
TTTCT	19	8	1																																																																																															28
TTTGA	3		1																																																																																															4
TTTGG	1																																																																																																	1
TTTGT	1																																																																																																	1
TTTTA	22	4	5	2															1																																																																															34
TTTTC	44	16	5	1																																																																																														66
TTTTG	2	2																																																																																																4
AAAAAC	1																																																																																																	1
AAAAAG	10	6	1																																																																																															17
AAAAAT	16	3		1																																																																																														20
AAAACA	1	1																																																																																																2
AAAAGA	10	2		1																																																																																														13
AAAATA	7																																																																																																	7
AAAATT	2																																																																																																	2
AAACCA		1																																																																																																1
AAAGAA	7	1	1																																																																																															9
AAAGAC	1																																																																																																	1
AAAGAG	1	1																																																																																																2
AAAGGT	1																																																																																																	1
AAATAA	6																																																																																																	6
AAATGA	1																																																																																																	1
AAATTA	1																																																																																																	1
AAATTG	1																																																																																																	1
AACCAC	1																																																																																																	1
AACCTC	1																																																																																																	1
AACCTG	1																																																																																																	1
AAGAAA	5																																																																																																	5
AAGAGG	1																																																																																																	1
AATAAA	1																																																																																																	1
AATAAC	1																																																																																																	1
AATATT	1																																																																																																	1
AATGAA	2																																																																																																	2
AATGAG	1																																																																																																	1
AATTAA	1																																																																																																	1
AATTAT	1																																																																																																	1
AATTTA	1																																																																																																	1
AATTTT	1																																																																																																	1
ACAACC	1																																																																																																	1
ACAACT	2																																																																																																	2
ACAAGA		1																																																																																																1
ACAATC	1																																																																																																	1
ACCACT	2																																																																																																	2
ACCAGC	1																																																																																																	1
ACCCAA	2																																																																																																	2
ACCCCA	1																																																																																																	1
ACCGCC	1																																																																																																	1
ACTTGG	1																																																																																																	1
AGAAAA	5		1																																																																																															6
AGAAAG			1																																																																																															1
AGACAA	1																																																																																																	1
AGACAC	1																																																																																																	1
AGACGG	1																																																																																																	1
AGAGAA	1																																																																																																	1
AGAGCC	1																																																																																																	1
AGAGCG	1																																																																																																	1
AGAGGG	1																																																																																																	1
AGCAAA	1																																																																																																	1
AGCCGC	1																																																																																																	1
AGCGTC	1																																																																																																	1
AGCTCT	1	1																																																																																																2
AGGAAA	2																																																																																																	2
AGGACA	1																																																																																																	1
AGGAGC	1																																																																																																	1
AGGCGA	1																																																																																																	1
AGGCGG	1																																																																																																	1
AGGGCA	1																																																																																																	1
AGTAGA	1																																																																																																	1
AGTATG	1																																																																																																	1
AGTCCA	1																																																																																																	1
AGTGGC		1																																																																																																1
AGTTTC	1																																																																																																	1
ATAAAA	4	1																																																																																																5
ATAAAG	1																																																																																																	1
ATAAAT	1																																																																																																	1
ATAATC	1																																																																																																	1
ATAATT	1																																																																																																	1
ATAGTC	1																																																																																																	1
ATATAC	2																																																																																																	2
ATATTA	1																																																																																																	1
ATCATA	1																																																																																																	1
ATCCAT		1																																																																																																1
ATCCTC	3																																																																																																	3
ATCGCC	1																																																																																																	1
ATGAGA	1																																																																																																	1
ATGCCA	1																																																																																																	1
ATGCTG	1																																																																																																	1
ATGGTC	1																																																																																																	1
ATGTAC	1																																																																																																	1
ATGTCT	1																																																																																																	1
ATTAAT	5																																																																																																	5
ATTATA	2																																																																																																	2
ATTCAC	1																																																																																																	1
ATTCTC	1																																																																																																	1
ATTTAA	1	1																																																																																																2
ATTTTT	1	1	1																																																																																															3
CAAAAG	1																																																																																																	1
CAACAG			1																																																																																															1
CAAGAA	1																																																																																																	1
CAATCC	1																																																																																																	1
CACACC		1																																																																																																1
CACATC	1																																																																																																	1
CACCAG	1																																																																																																	1
CACTAC	1																																																																																																	1
CACTAT	1																																																																																																	1
CAGCAA	1																																																																																																	1
CAGCCC		1																																																																																																1
CAGCCG	1																																																																																																	1
CAGGCC	1																																																																																																	1
CATAAT	1																																																																																																	1
CATAGC	1																																																																																																	1
CATCAA	1																																																																																																	1
CATCAC	2																																																																																																	2
CATCAG	2																																																																																																	2
CATCCT															1																																																																																			1
CATCGG	1																																																																																																	1
CATCGT	1																																																																																																	1
CATGTG	1																																																																																																	1
CATTTC	1			1																																																																																														2
CATTTT	1																																																																																																	1
CCAAGA	1																																																																																																	1
CCACAA	1																																																																																																	1
CCACGG	1																																																																																																	1
CCACTG	1																																																																																																	1
CCATGT	1																																																																																																	1
CCATTA	1																																																																																																	1
CCCCAA	1																																																																																																	1
CCCCCT	2																																																																																																	2
CCCCGG	1																																																																																																	1
CCCTCT		1																																																																																																1
CCGAGA	1																																																																																																	1
CCGCCC	1																																																																																																	1
CCGCGC	1																																																																																																	1
CCGGCT	1																																																																																																	1
CCTCTC	1		1																																																																																															2
CCTCTG	2																																																																																																	2
CCTCTT	2																																																																																																	2
CCTGCA	1																																																																																																	1
CCTTTC		1																																																																																																1
CGAAGC	1																																																																																																	1
CGACCT	1																																																																																																	1
CGATAG		1																																																																																																1
CGATCA	1																																																																																																	1
CGATCC	1																																																																																																	1
CGATGA	2																																																																																																	2
CGCAAT		1																																																																																																1
CGCAGC	2	1																																																																																																3
CGGCAG		1																																																																																																1
CGGCGC	1																																																																																																	1
CGGCTC	1																																																																																																	1
CGGGTT	1																																																																																																	1
CGGTGC		1																																																																																																1
CGTCCG	1																																																																																																	1
CGTCCT	1																																																																																																	1
CTACCA	1																																																																																																	1
CTATTT	1																																																																																																	1
CTCACT	1																																																																																																	1
CTCAGA	1																																																																																																	1
CTCATC	1																																																																																																	1
CTCCCG	1																																																																																																	1
CTCGTC	1																																																																																																	1
CTGATA	1																																																																																																	1
CTGCCG		1																																																																																																1
CTGCTA	2																																																																																																	2
CTGCTC	1																																																																																																	1
CTGGAG	2																																																																																																	2
CTGGCA	1																																																																																																	1
CTGGCT	1																																																																																																	1
CTGTTG	1																																																																																																	1
CTTCGT	1																																																																																																	1
CTTCTC		1																																																																																																1
CTTTCT	1																																																																																																	1
CTTTTA	1																																																																																																	1
CTTTTT	3	2																																																																																																5
GAAAAA	2																																																																																																	2
GAAAAG	1																																																																																																	1
GAAAAT	1																																																																																																	1
GAAAGG	1																																																																																																	1
GAACCC	1																																																																																																	1
GAAGAG	3																																																																																																	3
GAAGTG	1																																																																																																	1
GAATGG	1																																																																																																	1
GAATTA	1																																																																																																	1
GACAAC	1																																																																																																	1
GACAAG		1																																																																																																1
GACAGG	1																																																																																																	1
GACATG	2																																																																																																	2
GACGAA	1																																																																																																	1
GACGAG	2																																																																																																	2
GACGAT	1																																																																																																	1
GACGCA	1																																																																																																	1
GAGAAA	1																																																																																																	1
GAGCCA	1																																																																																																	1
GAGCCT	1																																																																																																	1
GAGCGC	1																																																																																																	1
GAGGAA	3																																																																																																	3
GAGGAT	2	1																																																																																																3
GAGGCG	1																																																																																																	1
GAGGGA	1																																																																																																	1
GAGTCG	1																																																																																																	1
GAGTGG	1																																																																																																	1
GATAGG	1																																																																																																	1
GATATC	1																																																																																																	1
GATCCT	1																																																																																																	1
GATGAA		1																																																																																																1
GATGAC	1																																																																																																	1
GATGAG	1																																																																																																	1
GATGGT	1																																																																																																	1
GATGTT	1																																																																																																	1
GATTAT	1																																																																																																	1
GATTGG	1																																																																																																	1
GCAACA	1																																																																																																	1
GCAGAA	1																																																																																																	1
GCAGCC	2																																																																																																	2
GCAGTA	1																																																																																																	1
GCATCA	1																																																																																																	1
GCATCG	1																																																																																																	1
GCCACG	1																																																																																																	1
GCCATC	1																																																																																																	1
GCCATT	1																																																																																																	1
GCCTGA	2		1																																																																																															3
GCGCCT	1																																																																																																	1
GCGTGA	1																																																																																																	1
GCTCAG	1																																																																																																	1
GCTCCC	1																																																																																																	1
GCTCCT		1																																																																																																1
GCTCTC	1																																																																																																	1
GCTGCA	1																																																																																																	1
GCTGGA	2																																																																																																	2
GCTTTT	1																																																																																																	1
GGAAGA	1																																																																																																	1
GGAAGC	1																																																																																																	1
GGACAG	1																																																																																																	1
GGAGAA	1																																																																																																	1
GGAGAG	2																																																																																																	2
GGAGCC	1																																																																																																	1
GGAGCT	1																																																																																																	1
GGAGTT	1																																																																																																	1
GGCAAT		1																																																																																																1
GGCATT	1																																																																																																	1
GGCGTG	1																																																																																																	1
GGCTCC	1																																																																																																	1
GGCTCG	1	1																																																																																																2
GGCTCT	1																																																																																																	1
GGGGAT	1																																																																																																	1
GGGTTG	1	1																																																																																																2
GGTCCC		1																																																																																																1
GGTGAC	1																																																																																																	1
GGTGAG	1																																																																																																	1
GGTGGC	2																																																																																																	2
GGTTAT	1																																																																																																	1
GTAAAA	1																																																																																																	1
GTACAT		1																																																																																																1
GTAGTC	1																																																																																																	1
GTAGTG	1												1																																																																																					2
GTATAG	1																																																																																																	1
GTCAAA	1																																																																																																	1
GTCGCA	1																																																																																																	1
GTGCTC	1																																																																																																	1
GTGGCC	1																																																																																																	1
GTGGGG	1																																																																																																	1
GTGGTC	1																																																																																																	1
GTGTGC	1																																																																																																	1
GTGTTG		1																																																																																																1
GTTCAT	1																																																																																																	1
GTTCCT	1																																																																																																	1
GTTCTT	1																																																																																																	1
GTTGAA	2																																																																																																	2
GTTGAC	1																																																																																																	1
GTTGGC					1																																																																																													1
GTTGGT	1																																																																																																	1
GTTTTT	1																																																																																																	1
TAAAAA	3																																																																																																	3
TAAAAT	2	1																																																																																																3
TAAGAA	1																																																																																																	1
TAATTA	2																																																																																																	2
TAATTG	1																																																																																																	1
TACACA	1																																																																																																	1
TACATT		1																																																																																																1
TACTAT	1																																																																																																	1
TAGAAA	1																																																																																																	1
TAGGTA	1																																																																																																	1
TATAAT	2																																																																																																	2
TATAGT	1																																																																																																	1
TATTAA	2																																																																																																	2
TATTGG	1																																																																																																	1
TATTTA	1																																																																																																	1
TATTTT	7	1																																																																																																8
TCAATG	1																																																																																																	1
TCACGA	1																																																																																																	1
TCATCC	1																																																																																																	1
TCATCG	1																																																																																																	1
TCATTT	1																																																																																																	1
TCCAGC	1																																																																																																	1
TCCTGC	1																																																																																																	1
TCCTTT		1																																																																																																1
TCGATC	1																																																																																																	1
TCGCAA	1																																																																																																	1
TCGCAG	1																																																																																																	1
TCGCTG	1																																																																																																	1
TCGGCT	1																																																																																																	1
TCGGGA	1																																																																																																	1
TCGTCA	2																																																																																																	2
TCGTCC	1																																																																																																	1
TCGTCT	1																																																																																																	1
TCTACG		1																																																																																																1
TCTACT		1																																																																																																1
TCTGGC	1																																																																																																	1
TCTGTT		1																																																																																																1
TCTTCA		1																																																																																																1
TCTTCC	1																																																																																																	1
TCTTCG	1																																																																																																	1
TCTTGT	1																																																																																																	1
TCTTTA	1																																																																																																	1
TCTTTC	2																																																																																																	2
TCTTTT	6	2																																																																																																8
TGAAGA	1																																																																																																	1
TGAATG	1																																																																																																	1
TGACCC	1																																																																																																	1
TGACGA	2																																																																																																	2
TGACGC	1																																																																																																	1
TGAGCG	1																																																																																																	1
TGAGGA			1																																																																																															1
TGAGGC	1																																																																																																	1
TGATGT	1																																																																																																	1
TGCAAC	1																																																																																																	1
TGCAGA	1																																																																																																	1
TGCATA	1																																																																																																	1
TGCCAC		1																																																																																																1
TGCCCT	1																																																																																																	1
TGCGCT	1																																																																																																	1
TGCGGT	1																																																																																																	1
TGCTGT			2																																																																																															2
TGCTTC	2																																																																																																	2
TGCTTT	1																																																																																																	1
TGGGTT	1																																																																																																	1
TGGTGA	1																																																																																																	1
TGGTGT	1																																																																																																	1
TGTATG	1																																																																																																	1
TGTCGT	1																																																																																																	1
TGTGAC	1																																																																																																	1
TGTGGT	1																																																																																																	1
TGTGTA	1																																																																																																	1
TGTTTT	1																																																																																																	1
TTAATA	4																																																																																																	4
TTAATT	1																																																																																																	1
TTACTA	1																																																																																																	1
TTAGAT	1																																																																																																	1
TTAGTT	1																																																																																																	1
TTATAA		1																																																																																																1
TTATTT	2																																																																																																	2
TTCCTC		1																																																																																																1
TTCCTG	1																																																																																																	1
TTCCTT	1																																																																																																	1
TTCGGG	1																																																																																																	1
TTCTTG	2																																																																																																	2
TTCTTT	5	2					1																																																																																											8
TTGGGA	1																																																																																																	1
TTGGGG	1																																																																																																	1
TTGGGT	1																																																																																																	1
TTGTGT	1																																																																																																	1
TTTAAT	2																																																																																																	2
TTTAGA	1																																																																																																	1
TTTATA	1																																																																																																	1
TTTATT	9																																																																																																	9
TTTCAC	1																																																																																																	1
TTTCAT	1																																																																																																	1
TTTCCC	1																																																																																																	1
TTTCCT	1																																																																																																	1
TTTCTC	1																																																																																																	1
TTTCTT	9	2																																																																																																11
TTTGGG	1																																																																																																	1
TTTTAA	4																																																																																																	4
TTTTAT	8	2		1																																																																																														11
TTTTCA	1			1																																																																																														2
TTTTCC	2																																																																																																	2
TTTTCT	8	5																																																																																																13
TTTTGA		1																																																																																																1
TTTTGG	1																																																																																																	1
TTTTTA	11	1	1																																																																																															13
TTTTTC	18	1	1																																																																																															20

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	39	33	28	20	38	31	21	29	28	19	17	9	6	6	3	3	3	4	10	6	6	2	5	5	4	2	2	4	2	2	2	2	2	1		3	1	2	1					1						2		1	1													1	1													1	409
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	8	8	7	2	5	4		2		1									1						1			1			1			1	1	2						1	1														1		1		1											1								58
AC/GT	-	-	-	35	23	10	5	7	1	1	2	3	3	1	3		4			1				1									1						1									1																																																		103
AG/CT	-	-	-	99	45	35	28	10	11	8	4	7	3	5	1	1	1	1	1	1	2								1																																																																					264
AT/AT	-	-	-	202	69	32	25	16	13	5	6	5	2																																																																																					375
CG/CG	-	-	-	2																																																																																														2
AAC/GTT	-	-	21	14	2	5	1				1		1									1																																																																												46
AAG/CTT	-	-	60	23	14	8	1	5	4	5	2	1	1	1				1					1								1																																																																			128
AAT/ATT	-	-	73	33	14	10	2	2	3	1	2							1											1		3																																																																			145
ACC/GGT	-	-	22	8	5	1	1																																																																																											37
ACG/CGT	-	-	12	2		1	1																																																																																											16
ACT/AGT	-	-	11	7	2	4		2	1	1				1	1				1									1		1																																																																				33
AGC/CTG	-	-	20	15	4	7	1			2																																																																																								49
AGG/CCT	-	-	17	8	3		2	3			1				1											1																																																																								36
ATC/ATG	-	-	31	7	4	1	1	1	1																																																																																									46
CCG/CGG	-	-	21	4	1	1																																																																																												27
AAAC/GTTT	-	2																																																																																																2
AAAG/CTTT	-	59	27	14	2	2	3	1		1	2							1																																																																																112
AAAT/ATTT	-	77	15	5	3	1																																																																																												101
AACC/GGTT	-	1		1																																																																																														2
AACT/AGTT	-	1	1																																																																																															2
AAGC/CTTG	-	2																																																																																																2
AAGG/CCTT	-	3	2																																																																																															5
AAGT/ACTT	-	1																																																																																																1
AATC/ATTG	-	16	5	4	1	1																																																																																												27
AATG/ATTC	-	9	1	2																																																																																														12
AATT/AATT	-	22	1	1		1																																																																																												25
ACAG/CTGT	-		2	1																																																																																														3
ACAT/ATGT	-	33	9	7	4			1																																																																																										54
ACCG/CGGT	-	1																																																																																																1
ACCT/AGGT	-	3		1			1																																																																																											5
ACTC/AGTG	-	10		1																																																																																														11
ACTG/AGTC	-	3																																																																																																3
AGAT/ATCT	-	8	3		1																																																																																													12
AGCG/CGCT	-	1																																																																																																1
AGCT/AGCT	-	1																																																																																																1
AGGC/CCTG	-	1																																																																																																1
AGGG/CCCT	-	3																																																																																																3
ATCC/ATGG	-	6																																																																																																6
ATGC/ATGC	-	1																																																																																																1
AAAAC/GTTTT	15	3																																																																																																18
AAAAG/CTTTT	200	64	17	1	3		1																																																																																											286
AAAAT/ATTTT	146	27	10	3		2								1					1																																																																															190
AAACC/GGTTT	5																																																																																																	5
AAACG/CGTTT	1	1																																																																																																2
AAACT/AGTTT	6																																																																																																	6
AAAGC/CTTTG	3	1																																																																																																4
AAAGG/CCTTT	27																																																																																																	27
AAAGT/ACTTT	2																																																																																																	2
AAATC/ATTTG	8		2																																																																																															10
AAATG/ATTTC	11	1	1																																																																																															13
AAATT/AATTT	61	1	1																																																																																															63
AACAC/GTGTT	6																																																																																																	6
AACAT/ATGTT	1																																																																																																	1
AACCC/GGGTT	9																																																																																																	9
AACCG/CGGTT	3																																																																																																	3
AACCT/AGGTT	3	1																																																																																																4
AACGC/CGTTG	2																																																																																																	2
AACTC/AGTTG	2																																																																																																	2
AACTG/AGTTC	1																																																																																																	1
AAGAC/CTTGT	4	1																																																																																																5
AAGAG/CTCTT	15	1	1																																																																																															17
AAGAT/ATCTT	3																																																																																																	3
AAGCC/CTTGG	1																																																																																																	1
AAGCT/AGCTT	1																																																																																																	1
AAGGC/CCTTG	1																																																																																																	1
AAGGG/CCCTT	10	1																																																																																																11
AAGGT/ACCTT	1																																																																																																	1
AAGTC/ACTTG	4																																																																																																	4
AAGTG/ACTTC	1																																																																																																	1
AATAC/ATTGT	4																																																																																																	4
AATAG/ATTCT	2	1																																																																																																3
AATAT/ATATT	33	1																																																																																																34
AATCC/ATTGG	5																																																																																																	5
AATCT/AGATT	3																																																																																																	3
AATGC/ATTGC	4	2																																																																																																6
AATGG/ATTCC	3	1																																																																																																4
AATGT/ACATT	1	1																																																																																																2
AATTC/AATTG	5	1																																																																																																6
ACACC/GGTGT	2																																																																																																	2
ACACG/CGTGT	2																																																																																																	2
ACACT/AGTGT	1	1																																																																																																2
ACAGC/CTGTG	1																																																																																																	1
ACAGG/CCTGT	3																																																																																																	3
ACAGT/ACTGT	9																																																																																																	9
ACATC/ATGTG	5																																																																																																	5
ACATG/ATGTC	4	1																																																																																																5
ACCAG/CTGGT	2																																																																																																	2
ACCAT/ATGGT	7																																																																																																	7
ACCCC/GGGGT	3																																																																																																	3
ACCCG/CGGGT	1																																																																																																	1
ACCCT/AGGGT	1	1																																																																																																2
ACCGG/CCGGT	1																																																																																																	1
ACCGT/ACGGT	3	1																																																																																																4
ACCTC/AGGTG	1																																																																																																	1
ACCTG/AGGTC	1																																																																																																	1
ACGAG/CGTCT	2	1																																																																																																3
ACGAT/ATCGT	1																																																																																																	1
ACGCC/CGTGG	1																																																																																																	1
ACGGC/CCGTG	1																																																																																																	1
ACGGG/CCCGT	1	2																																																																																																3
ACTAG/AGTCT	5	1																																																																																																6
ACTAT/AGTAT	3																																																																																																	3
ACTCC/AGTGG	1																																																																																																	1
ACTCG/AGTCG		1																																																																																																1
ACTCT/AGAGT	1																																																																																																	1
ACTGG/AGTCC		1																																																																																																1
AGAGC/CTCTG	1																																																																																																	1
AGAGG/CCTCT	7																																																																																																	7
AGATC/ATCTG		2																																																																																																2
AGATG/ATCTC	10	3																																																																																																13
AGCAT/ATGCT	2																																																																																																	2
AGCCC/CTGGG	2																																																																																																	2
AGCCG/CGGCT	2																																																																																																	2
AGCGG/CCGCT	1																																																																																																	1
AGCTC/AGCTG	6																																																																																																	6
AGGAT/ATCCT	4																																																																																																	4
AGGCG/CCTCG	2	1																																																																																																3
AGGGC/CCCTG	1																																																																																																	1
AGGGG/CCCCT	8	1																																																																																																9
ATATC/ATATG	7																																																																																																	7
ATCCC/ATGGG	5	1																																																																																																6
ATCGC/ATGCG	1																																																																																																	1
AAAAAC/GTTTTT	4	1																																																																																																5
AAAAAG/CTTTTT	88	23	4	1			1																																																																																											117
AAAAAT/ATTTTT	75	9	2	2																																																																																														88
AAAACC/GGTTTT	1	1																																																																																																2
AAAACT/AGTTTT	1																																																																																																	1
AAAAGC/CTTTTG	4																																																																																																	4
AAAAGG/CCTTTT	7	1																																																																																																8
AAAAGT/ACTTTT	2																																																																																																	2
AAAATC/ATTTTG		1																																																																																																1
AAAATG/ATTTTC	8			1																																																																																														9
AAAATT/AATTTT	14	1																																																																																																15
AAACAC/GTGTTT	1																																																																																																	1
AAACAG/CTGTTT		1																																																																																																1
AAACCC/GGGTTT	5																																																																																																	5
AAACTG/AGTTTC	1																																																																																																	1
AAAGAC/CTTTGT	2																																																																																																	2
AAAGAG/CTCTTT	7	1	1																																																																																															9
AAAGAT/ATCTTT	2																																																																																																	2
AAAGGG/CCCTTT	2	1																																																																																																3
AAAGGT/ACCTTT	1																																																																																																	1
AAAGTC/ACTTTG	1																																																																																																	1
AAAGTG/ACTTTC	1																																																																																																	1
AAATAG/ATTTCT	2																																																																																																	2
AAATAT/ATATTT	3																																																																																																	3
AAATCT/AGATTT	2																																																																																																	2
AAATGG/ATTTCC	1			1																																																																																														2
AAATGT/ACATTT		1																																																																																																1
AAATTG/AATTTC	1																																																																																																	1
AAATTT/AAATTT	2	1																																																																																																3
AACAAG/CTTGTT	5	1																																																																																																6
AACAAT/ATTGTT	1																																																																																																	1
AACACC/GGTGTT	2	1																																																																																																3
AACAGC/CTGTTG	3		3																																																																																															6
AACAGG/CCTGTT	2																																																																																																	2
AACATC/ATGTTG	3																																																																																																	3
AACATG/ATGTTC	1																																																																																																	1
AACCAC/GGTTGT	4																																																																																																	4
AACCAT/ATGGTT	1																																																																																																	1
AACCCC/GGGGTT	4	1																																																																																																5
AACCCG/CGGGTT	3																																																																																																	3
AACCGC/CGGTTG	1																																																																																																	1
AACCTC/AGGTTG	1																																																																																																	1
AACCTG/AGGTTC	1																																																																																																	1
AACGAC/CGTTGT	2																																																																																																	2
AACGCC/CGTTGG					1																																																																																													1
AACGTC/ACGTTG	1																																																																																																	1
AACTAC/AGTTGT	2																																																																																																	2
AACTAT/AGTTAT	1																																																																																																	1
AACTCC/AGTTGG	1																																																																																																	1
AACTGC/AGTTGC	1																																																																																																	1
AACTTC/AAGTTG	2																																																																																																	2
AAGAAT/ATTCTT	1																																																																																																	1
AAGACC/CTTGGT	1																																																																																																	1
AAGACG/CGTCTT	4																																																																																																	4
AAGAGG/CCTCTT	11	1																																																																																																12
AAGATG/ATCTTC	1	2																																																																																																3
AAGCAG/CTGCTT	3																																																																																																	3
AAGCCG/CGGCTT	2																																																																																																	2
AAGCGC/CGCTTG	1																																																																																																	1
AAGCGG/CCGCTT	1																																																																																																	1
AAGGAC/CCTTGT	1	1																																																																																																2
AAGGAG/CCTTCT	1	1																																																																																																2
AAGGCG/CCTTCG	1																																																																																																	1
AAGGGC/CCCTTG	2																																																																																																	2
AAGTAG/ACTTCT	1	1																																																																																																2
AAGTCC/ACTTGG	2																																																																																																	2
AAGTGG/ACTTCC	1																																																																																																	1
AATACC/ATTGGT	1																																																																																																	1
AATAGT/ACTATT	2																																																																																																	2
AATATT/AATATT	13																																																																																																	13
AATCAC/ATTGTG	1																																																																																																	1
AATCAT/ATGATT	4																																																																																																	4
AATCCC/ATTGGG	3																																																																																																	3
AATCGC/ATTGCG	1	1																																																																																																2
AATGAG/ATTCTC	3																																																																																																	3
AATGCC/ATTGGC	2																																																																																																	2
AATGGC/ATTGCC	1	1																																																																																																2
AATGGG/ATTCCC	1																																																																																																	1
AATGGT/ACCATT	1																																																																																																	1
AATGTC/ACATTG	1																																																																																																	1
AATGTG/ACATTC	2																																																																																																	2
AATTAC/AATTGT	1																																																																																																	1
AATTAG/AATTCT	1																																																																																																	1
AATTAT/AATTAT	8	1																																																																																																9
ACACAG/CTGTGT	1																																																																																																	1
ACACAT/ATGTGT	3																																																																																																	3
ACACCC/GGGTGT		1																																																																																																1
ACACGC/CGTGTG	1																																																																																																	1
ACAGCG/CGCTGT	1																																																																																																	1
ACAGGG/CCCTGT	2																																																																																																	2
ACAGTC/ACTGTG	1																																																																																																	1
ACATAG/ATGTCT	1																																																																																																	1
ACATAT/ATATGT	2																																																																																																	2
ACATCC/ATGTGG	1																																																																																																	1
ACATGC/ATGTGC	1																																																																																																	1
ACATGG/ATGTCC	3																																																																																																	3
ACATGT/ACATGT	1	1																																																																																																2
ACCACG/CGTGGT	1																																																																																																	1
ACCACT/AGTGGT	5												1																																																																																					6
ACCAGC/CTGGTG	2																																																																																																	2
ACCATC/ATGGTG	4																																																																																																	4
ACCATG/ATGGTC	1																																																																																																	1
ACCCCC/GGGGGT	1																																																																																																	1
ACCCTC/AGGGTG	1																																																																																																	1
ACCCTG/AGGGTC	1																																																																																																	1
ACCGAG/CGGTCT	1																																																																																																	1
ACCGCC/CGGTGG	3																																																																																																	3
ACCGGC/CCGGTG		1																																																																																																1
ACCGGG/CCCGGT		1																																																																																																1
ACCGTC/ACGGTG	1																																																																																																	1
ACCTAT/AGGTAT	2																																																																																																	2
ACCTCG/AGGTCG	1																																																																																																	1
ACCTGC/AGGTGC	1																																																																																																	1
ACGACT/AGTCGT	1																																																																																																	1
ACGAGC/CGTGCT	1																																																																																																	1
ACGAGG/CCTCGT	5																																																																																																	5
ACGATC/ATCGTG	2																																																																																																	2
ACGATG/ATCGTC	10																																																																																																	10
ACGCAG/CGTCTG	1																																																																																																	1
ACGCCC/CGTGGG	1																																																																																																	1
ACGCGG/CCGCGT	1																																																																																																	1
ACGCTC/AGCGTG	2																																																																																																	2
ACGCTG/AGCGTC	2																																																																																																	2
ACGGAG/CCGTCT	1																																																																																																	1
ACGGCC/CCGTGG	3																																																																																																	3
ACGTAG/ACGTCT		1																																																																																																1
ACTATC/AGTGAT	1																																																																																																	1
ACTATG/AGTCAT	1																																																																																																	1
ACTCAG/AGTCTG	1																																																																																																	1
ACTCAT/AGTATG	1																																																																																																	1
ACTCCC/AGTGGG	1																																																																																																	1
ACTCCG/AGTCGG	1																																																																																																	1
ACTCTC/AGAGTG	1																																																																																																	1
ACTGAT/AGTATC	1																																																																																																	1
ACTGCC/AGTGGC	1	2																																																																																																3
ACTGCG/AGTCGC	2																																																																																																	2
ACTGCT/AGCAGT	3																																																																																																	3
ACTGGC/AGTGCC	1																																																																																																	1
AGAGCC/CTCTGG	5																																																																																																	5
AGAGCG/CGCTCT	2																																																																																																	2
AGAGCT/AGCTCT	1	1																																																																																																2
AGAGGC/CCTCTG	2																																																																																																	2
AGAGGG/CCCTCT	5	1	1																																																																																															7
AGATCG/ATCTCG	1																																																																																																	1
AGATGC/ATCTGC	1																																																																																																	1
AGCAGG/CCTGCT	3	1																																																																																																4
AGCATC/ATGCTG	4																																																																																																	4
AGCCAT/ATGGCT	1																																																																																																	1
AGCCCC/CTGGGG		1																																																																																																1
AGCCCG/CGGGCT	1	1																																																																																																2
AGCCGC/CGGCTG	6	1																																																																																																7
AGCCGG/CCGGCT	4																																																																																																	4
AGCCTC/AGGCTG	1																																																																																																	1
AGCCTG/AGGCTC	4		1																																																																																															5
AGCGAT/ATCGCT		1																																																																																																1
AGCGCG/CGCGCT	1																																																																																																	1
AGCGGC/CCGCTG		2																																																																																																2
AGCGGG/CCCGCT	2																																																																																																	2
AGCTCC/AGCTGG	6																																																																																																	6
AGCTGC/AGCTGC	1																																																																																																	1
AGGATC/ATCCTG	1																																																																																																	1
AGGATG/ATCCTC	8	1	1												1																																																																																			11
AGGCCC/CCTGGG	1																																																																																																	1
AGGCGC/CCTGCG	1																																																																																																	1
AGGCGG/CCGCCT	2																																																																																																	2
AGGGAT/ATCCCT	1																																																																																																	1
AGGGGG/CCCCCT	2																																																																																																	2
ATATCC/ATATGG		1																																																																																																1
ATATCG/ATATCG	1																																																																																																	1
ATATGC/ATATGC	1																																																																																																	1
ATCCCC/ATGGGG	1																																																																																																	1
ATCCCG/ATCGGG	2																																																																																																	2
ATCGCC/ATGGCG	2																																																																																																	2
ATCGGC/ATGCCG	2																																																																																																	2
CCCCCG/CGGGGG	1																																																																																																	1
CCCCGG/CCGGGG	1																																																																																																	1
CCCGCG/CGCGGG	1																																																																																																	1
CCGGCG/CCGGCG	1																																																																																																	1
