Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-10/megassr/results/hub_GCA_039267615.1/fasta/hub_GCA_039267615.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              38
Total size of examined sequences (bp):           37317367
Total number of identified SSRs:                 3624
Number of SSR containing sequences:              28
Number of sequences containing more than 1 SSR:  27
Number of SSRs present in compound formation:    310


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	487
2	711
3	558
4	374
5	900
6	594

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	27	16	17	16	13	17	10	14	11	3	4	2	2	4	3	6	4	7	5	6	2	2	4	3	1	2		2		2	1	2	1	1	2	2	1				1				1		1		2																1												1		241
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	2	5	1	2	2	1	1				1		1																										1																																								22
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	5		3		1			1									2												1	1					1	1																						1																				1	20
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	15	18	17	18	17	7	6	9	6	4	8	3	1	4		5	1	2	2	3	4	4		5		2	1	3	2	1		3		1			2		2		2	1		1					1		1	1																											204
AC	-	-	-	7	2	2	2		1	1			2	1						1								1																			1	1																																																	22
AG	-	-	-	23	15	9	9	5	7	2	1	1		3	1			2		1																																																																													79
AT	-	-	-	81	30	13	18	10	5	4	2	2		1																																																																																			166
CA	-	-	-	13	1	1			2	1		1		1		1		2	1																												1																																																		25
CG	-	-	-				1																																																																																										1
CT	-	-	-	20	7	5	4	2	2		1	1	2								1				1	1																																																																							47
GA	-	-	-	19	11	3	5	2		2		2									1																																																																												45
GC	-	-	-	3																																																																																													3
GT	-	-	-	13	6		1	2			2					1						1				1							1														1																																																		29
TA	-	-	-	106	24	16	14	4	3	2	2	1	1	1	1		1																																																																																176
TC	-	-	-	34	20	11	8	7	2	3	2	2		1	1		2				1																																																																												94
TG	-	-	-	6	6	2	1	2	1	1	1	1	1				1			1																																																																													24
AAC	-	-		2																																																																																													2
AAG	-	-	17	8	2	2	1		1																						2																																																																		33
AAT	-	-	9	6	5	3		1		3	1																				1																																																																		29
ACA	-	-	1		1					1																																																																																							3
ACC	-	-	3		1																																																																																												4
ACG	-	-				1																																																																																											1
ACT	-	-	1		1	1																					1																																																																						4
AGA	-	-	7	4	1		1	1																							1																																																																		15
AGC	-	-	1	4	1																																																																																												6
AGG	-	-			1		1				1		1																																																																																				4
AGT	-	-	2																												1																																																																		3
ATA	-	-	10	8		1		1		1	1						1																																																																																23
ATC	-	-	2	3																																																																																													5
ATG	-	-	4	1		1																																																																																											6
ATT	-	-	8	3	1			1																																																																																									13
CAA	-	-	5	3																																																																																													8
CAC	-	-	5	1	1		1																																																																																										8
CAG	-	-	6	2				1																																																																																									9
CAT	-	-	3	2	1	1																																																																																											7
CCA	-	-	7		1																																																																																												8
CCG	-	-			1																																																																																												1
CCT	-	-			1																																																																																												1
CGA	-	-	3	1																																																																																													4
CGC	-	-	3																																																																																														3
CGG	-	-	2			1																																																																																											3
CGT	-	-	1																																																																																														1
CTA	-	-	3	1		1															1																																																																												6
CTC	-	-	3	1		1	1	1																																																																																									7
CTG	-	-	9		1	2																																																																																											12
CTT	-	-	10	5	2	1	2								1																																																																																		21
GAA	-	-	7	4	3	1	2	1		2																				1																																																																			21
GAC	-	-	3					1			1																																																																																						5
GAG	-	-	4	1		2						1							1																																																																														9
GAT	-	-	3			1		1	1					1							1																																																																												8
GCA	-	-	3	3																																																																																													6
GCC	-	-	8	3																																																																																													11
GCG	-	-	2			1																																																																																											3
GCT	-	-	2	3																																																																																													5
GGA	-	-	1	1	1																																																																																												3
GGC	-	-	5																																																																																														5
GGT	-	-		3	1		1	1																																																																																									6
GTA	-	-	3	1			1																																																																																										5
GTC	-	-	1																																																																																														1
GTG	-	-	5								1																																																																																						6
GTT	-	-	2	2	4		2																																																																																										10
TAA	-	-	10	3			1																								1																																																																		15
TAC	-	-	2		1				2																																																																																								5
TAG	-	-	3	3	1			1														1																																																																											9
TAT	-	-	20	9	1			1		1																					2																																																																		34
TCA	-	-	10	1	1		1																	1																																																																									14
TCC	-	-	4	2	2		1						1																																																																																				10
TCG	-	-	2																																																																																														2
TCT	-	-	6	4		1				1												1																																																																											13
TGA	-	-	2	4						1																																																																																							7
TGC	-	-	6	1	2	2		2																																																																																									13
TGG	-	-	1	2				1																																																																																									4
TGT	-	-	6	1	4		1	1																																																																																									13
TTA	-	-	14	7	4	2	1																																																																																										28
TTC	-	-	11	5	3	1		1	1									1					1				1				1																																																																		26
TTG	-	-	4	2	1	2				1		1																																																																																					11
AAAC	-	1																																																																																															1
AAAG	-	13	9	5				1		1																																																																																							29
AAAT	-	24	7			1																																																																																											32
AAGA	-	4	4	2				1																																																																																									11
AATA	-	4			1		1																																																																																										6
AATC	-	3	1																																																																																														4
AATG	-	1																																																																																															1
AATT	-	10			1	1																																																																																											12
ACAT	-	4	1	1	1																																																																																												7
ACCA	-	1																																																																																															1
ACCG	-	1																																																																																															1
AGAA	-	6	2	3																																																																																													11
AGAC	-			1																																																																																													1
AGGA	-	1																																																																																															1
AGTG	-	2																																																																																															2
ATAA	-	11	1	1																																																																																													13
ATAC	-	5		2																																																																																													7
ATAG	-		1																																																																																														1
ATCA	-	4		1																																																																																													5
ATCT	-	1																																																																																															1
ATGA	-	1																																																																																															1
ATGG	-	1																																																																																															1
ATGT	-	2	1																																																																																														3
ATTC	-		2																																																																																														2
ATTG	-	1																																																																																															1
ATTT	-	6	3																																																																																														9
CAAC	-			1																																																																																													1
CAAG	-	1																																																																																															1
CAAT	-		1																																																																																														1
CATA	-	2		1				1																																																																																									4
CATC	-	1																																																																																															1
CCCT	-	1																																																																																															1
CCTA	-						1																																																																																										1
CGTG	-						1																																																																																										1
CTAC	-	1			1																																																																																												2
CTAT	-	2	1																																																																																														3
CTCA	-	2																																																																																															2
CTTC	-	2																																																																																															2
CTTT	-	4	6	1			1							1																																																																																			13
GAAA	-	6	1					1																																																																																									8
GACT	-	1																																																																																															1
GAGC	-	1																																																																																															1
GAGG	-	1																																																																																															1
GAGT	-			1																																																																																													1
GATA	-	1																																																																																															1
GATG	-	2																																																																																															2
GATT	-	2			1																																																																																												3
GCCA	-	1																																																																																															1
GGAA	-	1																																																																																															1
GGAG	-	1																																																																																															1
GGAT	-	1																																																																																															1
GTAA	-	1																																																																																															1
GTAG	-	1																																																																																															1
GTAT	-	4	4			1																																																																																											9
GTCA	-	1																																																																																															1
GTGA	-	2																																																																																															2
TAAA	-	8																																																																																															8
TAAC	-				1																																																																																												1
TAAT	-	3																																																																																															3
TACA	-	6	1	1																																																																																													8
TAGA	-	1																																																																																															1
TAGC	-	1																																																																																															1
TAGT	-	2																																																																																															2
TATC	-				1																																																																																												1
TATG	-	2		1	1	1																																																																																											5
TCAA	-	1		1	1																																																																																												3
TCAC	-	2																																																																																															2
TCAT	-	2		1																																																																																													3
TCCA	-		1																																																																																														1
TCCT	-	1																																																																																															1
TCTA	-	2	1																																																																																														3
TCTG	-					1																																																																																											1
TCTT	-	2	2	1	1		1																																																																																										7
TGAA	-	1																																																																																															1
TGAC	-	1																																																																																															1
TGAT	-	2	1																																																																																														3
TGCA	-	1																																																																																															1
TGTA	-	3	4	1			1																																																																																										9
TTAA	-	1																																																																																															1
TTAT	-	8																																																																																															8
TTCA	-	1																																																																																															1
TTCT	-	3																																																																																															3
TTGA	-	3	2	2																																																																																													7
TTGC	-	1																																																																																															1
TTGT	-	1																																																																																															1
TTTA	-	14	6				1	1																																																																																									22
TTTC	-	15	4	6	2	1	1		1																																																																																								30
TTTG	-	1																																																																																															1
AAAAC	4																																																																																																4
AAAAG	47	12	6																																																																																														65
AAAAT	37	13	1	2																																																																																													53
AAACA	2	1																																																																																															3
AAAGA	19	4																																																																																															23
AAAGG	4																																																																																																4
AAAGT	1																																																																																																1
AAATA	8	2																																																																																															10
AAATC	2																																																																																																2
AAATG	1																																																																																																1
AAATT	7																																																																																																7
AACTA	1																																																																																																1
AAGAA	12	5																																																																																															17
AAGAC	1																																																																																																1
AAGAG			1																																																																																														1
AAGGA	2																																																																																																2
AAGGG	1																																																																																																1
AAGTA	1																																																																																																1
AAGTC	2																																																																																																2
AATAA	12																																																																																																12
AATAT	8																																																																																																8
AATCC	2																																																																																																2
AATCT	1																																																																																																1
AATGG		1																																																																																															1
AATTA	4																																																																																																4
AATTC	1	1																																																																																															2
AATTG	1																																																																																																1
AATTT	1																																																																																																1
ACAAA	1																																																																																																1
ACAAC	1																																																																																																1
ACAGC	1																																																																																																1
ACATC	1																																																																																																1
ACCAA	1																																																																																																1
ACCAG	1																																																																																																1
ACCCA	1																																																																																																1
ACCCT		1																																																																																															1
ACCGT	1																																																																																																1
ACCTA	1																																																																																																1
ACCTG	1																																																																																																1
ACTAG	1																																																																																																1
ACTAT	1																																																																																																1
AGAAA	13	1	1																																																																																														15
AGAAG	4																																																																																																4
AGACA	1																																																																																																1
AGACT	1	1																																																																																															2
AGAGA	2																																																																																																2
AGAGC	1																																																																																																1
AGAGG	1																																																																																																1
AGATG	1			1																																																																																													2
AGATT	1																																																																																																1
AGCAA		1																																																																																															1
AGCCA	1																																																																																																1
AGCCC	1																																																																																																1
AGCCG	1																																																																																																1
AGCTG	1																																																																																																1
AGGAT	1																																																																																																1
AGGGA	1																																																																																																1
AGGGG	1																																																																																																1
AGGTG	1																																																																																																1
AGTAC	2																																																																																																2
AGTAG	1																																																																																																1
AGTGT		1																																																																																															1
ATAAA	16	1	1																																																																																														18
ATAAT	2																																																																																																2
ATACC	2																																																																																																2
ATACT	1																																																																																																1
ATAGA		1																																																																																															1
ATAGG	2																																																																																																2
ATATA	3																																																																																																3
ATATC	1																																																																																																1
ATATG	1																																																																																																1
ATATT	3																																																																																																3
ATCAC	2																																																																																																2
ATCAT	1																																																																																																1
ATCCA	2																																																																																																2
ATCCC	1																																																																																																1
ATCTC	1		1																																																																																														2
ATGAG	1																																																																																																1
ATGAT	2																																																																																																2
ATGGG	1	1																																																																																															2
ATGTG	1																																																																																																1
ATTAA	8		1																																																																																														9
ATTAT	2																																																																																																2
ATTCA	1																																																																																																1
ATTGC	1																																																																																																1
ATTTA	1																																																																																																1
ATTTC	2																																																																																																2
ATTTG	1																																																																																																1
ATTTT	11	4	1															1																																																																															17
CAAAA	1																																																																																																1
CAAAG	1																																																																																																1
CAAAT	1																																																																																																1
CAACA	1																																																																																																1
CAAGT	1																																																																																																1
CAATG	1																																																																																																1
CACGG	1																																																																																																1
CACTT	1																																																																																																1
CAGCC	1																																																																																																1
CAGTA	1																																																																																																1
CATAC	1																																																																																																1
CATAG	1																																																																																																1
CATCT	1																																																																																																1
CATGT	2																																																																																																2
CATTC	1																																																																																																1
CATTT	2																																																																																																2
CCAAA	1																																																																																																1
CCAAC	2																																																																																																2
CCAGT		1																																																																																															1
CCATT	1																																																																																																1
CCCCT	1																																																																																																1
CCCGA	1																																																																																																1
CCCTC	2																																																																																																2
CCCTT	1																																																																																																1
CCGGT	1																																																																																																1
CCGTA	2																																																																																																2
CCTCC	1																																																																																																1
CCTCT	1																																																																																																1
CCTTT	1																																																																																																1
CGACA	1																																																																																																1
CGACT		1																																																																																															1
CGATA	1																																																																																																1
CGCCT	1																																																																																																1
CGTCT	1																																																																																																1
CGTTG	1																																																																																																1
CGTTT	1																																																																																																1
CTATC	1																																																																																																1
CTCAG	1																																																																																																1
CTCAT	1																																																																																																1
CTCCG	1																																																																																																1
CTCTT	1																																																																																																1
CTGAT		1																																																																																															1
CTGTA	1																																																																																																1
CTGTC	1																																																																																																1
CTTCC	1																																																																																																1
CTTCT	1																																																																																																1
CTTGT		1																																																																																															1
CTTTC	1																																																																																																1
CTTTG	2	1																																																																																															3
CTTTT	16	5		1																																																																																													22
GAAAA	20	5	1																																																																																														26
GAAAG	3																																																																																																3
GAAAT	1		1																																																																																														2
GAACC	1																																																																																																1
GAAGA	1																																																																																																1
GAAGG	2																																																																																																2
GAATT	1																																																																																																1
GACGG	1																																																																																																1
GACTA	1																																																																																																1
GAGAA	2																																																																																																2
GAGAC		1																																																																																															1
GAGAG	1																																																																																																1
GAGAT	2	1																																																																																															3
GAGCC	1																																																																																																1
GAGGC	1																																																																																																1
GAGGG	1	1																																																																																															2
GATGG	1																																																																																																1
GATTG	3																																																																																																3
GCATC	1																																																																																																1
GCGTG	1																																																																																																1
GCTGA	2																																																																																																2
GGAAA	5																																																																																																5
GGAAG	1	1																																																																																															2
GGAGA	1		1																																																																																														2
GGATG	1																																																																																																1
GGGAA	1																																																																																																1
GGGAC	1																																																																																																1
GGGAG	1																																																																																																1
GGGAT	1																																																																																																1
GGGGA	1																																																																																																1
GGGTG	2																																																																																																2
GGGTT	1																																																																																																1
GGTAG	1																																																																																																1
GGTAT	1																																																																																																1
GGTGT	1																																																																																																1
GGTTA		1																																																																																															1
GGTTC	1																																																																																																1
GGTTT	1																																																																																																1
GTACA	1																																																																																																1
GTATT	1																																																																																																1
GTCCC			1																																																																																														1
GTCCT	1																																																																																																1
GTCTA	1																																																																																																1
GTCTC	1																																																																																																1
GTCTG	1																																																																																																1
GTCTT	2																																																																																																2
GTTGG	2																																																																																																2
GTTGT	1																																																																																																1
TAAAA	9	2		1																																																																																													12
TAAAC	1																																																																																																1
TAAAT	3																																																																																																3
TAACC	2																																																																																																2
TAATA	2																																																																																																2
TAATG	1																																																																																																1
TAATT	2	1																																																																																															3
TACAC	1																																																																																																1
TACAG	2																																																																																																2
TACAT	1																																																																																																1
TACCA	1																																																																																																1
TAGAA	1																																																																																																1
TAGAT	1																																																																																																1
TAGCT	1																																																																																																1
TAGTT	1																																																																																																1
TATAA	3																																																																																																3
TATAC	1																																																																																																1
TATAT	4																																																																																																4
TATCA	1																																																																																																1
TATGG	2																																																																																																2
TATTA	5																																																																																																5
TATTG	1																																																																																																1
TATTT	13		1	1																																																																																													15
TCAAC	1																																																																																																1
TCAGC	2																																																																																																2
TCATC	1	1																																																																																															2
TCATT	1	1																																																																																															2
TCCAA	1																																																																																																1
TCCTA	1																																																																																																1
TCCTC	1																																																																																																1
TCCTG	1																																																																																																1
TCGCC		1																																																																																															1
TCGGT	1																																																																																																1
TCGTG	1																																																																																																1
TCGTT		1																																																																																															1
TCTAT	1																																																																																																1
TCTCC	2																																																																																																2
TCTCG	1																																																																																																1
TCTCT	2	1																																																																																															3
TCTTA	1																																																																																																1
TCTTC	1																																																																																																1
TCTTT	8	2	1		1																																																																																												12
TGACA	1	1																																																																																															2
TGAGA	1																																																																																																1
TGAGC	1																																																																																																1
TGATA	1																																																																																																1
TGATC		1																																																																																															1
TGATT	2		1																																																																																														3
TGCAT	1	1																																																																																															2
TGCTA	1																																																																																																1
TGGAG	1																																																																																																1
TGGGT	1																																																																																																1
TGTAC	3																																																																																																3
TGTAT	1																																																																																																1
TGTGA	1																																																																																																1
TGTTA	1																																																																																																1
TGTTT	1		1																																																																																														2
TTAAA	5																																																																																																5
TTAAT	11																																																																																																11
TTAGT	1																																																																																																1
TTATA	2																																																																																																2
TTATT	7	4																																																																																															11
TTCAG	1																																																																																																1
TTCAT	2																																																																																																2
TTCCC	2																																																																																																2
TTCCT	3																																																																																																3
TTCTC	1																																																																																																1
TTCTT	11	7	1																																																																																														19
TTGAA	1																																																																																																1
TTGAC	1																																																																																																1
TTGAG	1																																																																																																1
TTGCA	1	1																																																																																															2
TTGCG	1																																																																																																1
TTGGG	2																																																																																																2
TTGGT	2																																																																																																2
TTGTA	1																																																																																																1
TTGTC	1																																																																																																1
TTGTT	1																																																																																																1
TTTAA	11																																																																																																11
TTTAG	1																																																																																																1
TTTAT	19	2																																																																																															21
TTTCA	2																																																																																																2
TTTCC	5																																																																																																5
TTTCG	1																																																																																																1
TTTCT	14	7	1																																																																																														22
TTTGA	1			1																																																																																													2
TTTGT	1																																																																																																1
TTTTA	29	1	2			1			1																																																																																								34
TTTTC	40	14	5	3																																																																																													62
TTTTG	3	2																																																																																															5
AAAAAC	1																																																																																																1
AAAAAG	23	3	1																																																																																														27
AAAAAT	11	5	1																																																																																														17
AAAACA	2	1																																																																																															3
AAAAGA	9	4																																																																																															13
AAAAGG	1	1																																																																																															2
AAAATA	11	1																																																																																															12
AAAATG	1																																																																																																1
AAAATT	1																																																																																																1
AAACAG		1																																																																																															1
AAAGAA	4																																																																																																4
AAAGAC	1																																																																																																1
AAAGAG	1																																																																																																1
AAAGCA	1																																																																																																1
AAAGGA	1																																																																																																1
AAAGGG			1																																																																																														1
AAAGGT	1																																																																																																1
AAATAA	6																																																																																																6
AAATAT			1																																																																																														1
AAATCT	1																																																																																																1
AACACA	1																																																																																																1
AACACC		1																																																																																															1
AACAGG	1																																																																																																1
AACCAC	1																																																																																																1
AACCCA		1																																																																																															1
AACCTC	1																																																																																																1
AACGCC			1																																																																																														1
AAGAAA	4			1																																																																																													5
AAGAAC	1																																																																																																1
AAGAGG		1																																																																																															1
AAGCCG			1																																																																																														1
AAGGGA	1																																																																																																1
AATAAA	4																																																																																																4
AATGAA	1																																																																																																1
AATGAG	1																																																																																																1
AATTAA	2																																																																																																2
AATTAT	1																																																																																																1
ACAACC	1																																																																																																1
ACAACT	1																																																																																																1
ACAAGA		1																																																																																															1
ACAATC	1																																																																																																1
ACAGCA	1																																																																																																1
ACCACT	1																																																																																																1
ACCAGC	1																																																																																																1
ACCATC	1																																																																																																1
ACCCCA	1																																																																																																1
ACCGCC	1																																																																																																1
ACGACC	1																																																																																																1
ACGCTC	1																																																																																																1
ACGTCA	1																																																																																																1
ACTTGG	1																																																																																																1
AGAAAA	3	2																																																																																															5
AGAAAG			1																																																																																														1
AGAACA		1																																																																																															1
AGACAA	1																																																																																																1
AGACAC	1																																																																																																1
AGACGG	1																																																																																																1
AGACGT		1																																																																																															1
AGAGAA	1																																																																																																1
AGAGCG	1																																																																																																1
AGAGGG	1																																																																																																1
AGCCCC	1																																																																																																1
AGCCGC	1	1																																																																																															2
AGCTCT	1																																																																																																1
AGCTGC	1																																																																																																1
AGGAAA	2																																																																																																2
AGGAAC	1																																																																																																1
AGGACA	1																																																																																																1
AGGCGC	1																																																																																																1
AGGCGG	1																																																																																																1
AGGGCA	1																																																																																																1
AGGGTC	1																																																																																																1
AGGTGC	1																																																																																																1
AGTAGA	1																																																																																																1
AGTAGC	1																																																																																																1
AGTCCA	1																																																																																																1
AGTGAG	1																																																																																																1
AGTGCG	1																																																																																																1
AGTTTC	1																																																																																																1
ATAAAA	4	1																																																																																															5
ATAATC	2																																																																																																2
ATAATT	3																																																																																																3
ATACAT	1																																																																																																1
ATAGTC	1																																																																																																1
ATATAC	2																																																																																																2
ATATTA	1																																																																																																1
ATCACA	1																																																																																																1
ATCATA	1																																																																																																1
ATCCAT	1																																																																																																1
ATCCCC	1																																																																																																1
ATCCTC	1																																																																																																1
ATCGTG	1																																																																																																1
ATGAAC	1																																																																																																1
ATGACG	2																																																																																																2
ATGCCA	1																																																																																																1
ATGGTC	1																																																																																																1
ATGTAC	1																																																																																																1
ATGTAG	1																																																																																																1
ATTAAT	5																																																																																																5
ATTATA	3																																																																																																3
ATTCTC	1																																																																																																1
ATTTAA	1	1																																																																																															2
ATTTAT	1																																																																																																1
ATTTTC	1																																																																																																1
ATTTTT	2																																																																																																2
CAAAAG	1																																																																																																1
CAACAG			1																																																																																														1
CAACAT	1																																																																																																1
CAAGAA	1																																																																																																1
CACACC		1																																																																																															1
CACCAA	1																																																																																																1
CACCAG		1																																																																																															1
CACTGC	1																																																																																																1
CAGAAG	1																																																																																																1
CAGCAA		1																																																																																															1
CAGCCC		1																																																																																															1
CAGCTC	2																																																																																																2
CAGGAA	1																																																																																																1
CAGGCT	1																																																																																																1
CATAAT	1																																																																																																1
CATACT	1																																																																																																1
CATCAA	1																																																																																																1
CATCAC	2																																																																																																2
CATCAG	2																																																																																																2
CATCCT		1																																																																																															1
CATCGT	1																																																																																																1
CATGGA	1																																																																																																1
CATGTG	1																																																																																																1
CATTTC		1																																																																																															1
CCACCT		1																																																																																															1
CCACTG	1																																																																																																1
CCATTA	1																																																																																																1
CCATTC	1																																																																																																1
CCCAAT		1																																																																																															1
CCCCCT	2																																																																																																2
CCCTCT	1		1																																																																																														2
CCGAAC	2																																																																																																2
CCGAGA	1																																																																																																1
CCGATG	1																																																																																																1
CCGTGG	2																																																																																																2
CCTCTC	1	1																																																																																															2
CCTCTG	1																																																																																																1
CCTGCG		1																																																																																															1
CGAAGC	1																																																																																																1
CGACCT	1																																																																																																1
CGATCA	1																																																																																																1
CGATCC	1																																																																																																1
CGATGA							1																																																																																										1
CGCAGC	1																																																																																																1
CGCCTC	1																																																																																																1
CGGAGC	1																																																																																																1
CGGCAG		1																																																																																															1
CGGCGC	1																																																																																																1
CGGCTC	1																																																																																																1
CTACCA	1																																																																																																1
CTATAC	1																																																																																																1
CTATCG		1																																																																																															1
CTCAGA	1																																																																																																1
CTCATC	2																																																																																																2
CTCGTC	1																																																																																																1
CTCTTT		1																																																																																															1
CTGATA	1																																																																																																1
CTGCTA	1																																																																																																1
CTGCTC	2																																																																																																2
CTGGCA	1																																																																																																1
CTGGCT	2																																																																																																2
CTGTTG	1																																																																																																1
CTTCGT	1																																																																																																1
CTTCTC	1																																																																																																1
CTTTTA	1																																																																																																1
CTTTTT	2	1																																																																																															3
GAAAAA	4	1																																																																																															5
GAAAAG	2																																																																																																2
GAAAAT	1																																																																																																1
GAAAGG	1																																																																																																1
GAAATG	1																																																																																																1
GAAGAC	1																																																																																																1
GAAGAG	4																																																																																																4
GAAGTG	1																																																																																																1
GAATTA	1																																																																																																1
GAATTG	1																																																																																																1
GACAAC	1																																																																																																1
GACGAG	1																																																																																																1
GAGAAA	1																																																																																																1
GAGAGC	1																																																																																																1
GAGCCT	1																																																																																																1
GAGCGC	1																																																																																																1
GAGGAA	2																																																																																																2
GAGGAC	1																																																																																																1
GAGGAT	3																																																																																																3
GAGTCG	1																																																																																																1
GAGTGG	1																																																																																																1
GATAGG	1																																																																																																1
GATATC	1																																																																																																1
GATCCT	1																																																																																																1
GATGAC	2																																																																																																2
GATGGC	1																																																																																																1
GATTGG			1																																																																																														1
GCAACA	1																																																																																																1
GCAATG	1																																																																																																1
GCAGGA		1																																																																																															1
GCAGTA	1																																																																																																1
GCATCA	1																																																																																																1
GCATCG	1																																																																																																1
GCCTGA	1		1																																																																																														2
GCCTGT		1																																																																																															1
GCGATG	1																																																																																																1
GCGCGG	1																																																																																																1
GCGGCA		1																																																																																															1
GCTAGA			1																																																																																														1
GCTCAG	1																																																																																																1
GCTCCC	1																																																																																																1
GCTGAC	1																																																																																																1
GCTGCG	1																																																																																																1
GCTGGA	1																																																																																																1
GCTTCC	1																																																																																																1
GCTTCT	1																																																																																																1
GCTTTT	1																																																																																																1
GGAAAA	1																																																																																																1
GGAAGA	1																																																																																																1
GGACAG	1																																																																																																1
GGACGC	1																																																																																																1
GGAGAG	1																																																																																																1
GGATTT	1																																																																																																1
GGCACC		1																																																																																															1
GGCATT	1																																																																																																1
GGCGGA	1																																																																																																1
GGCTCC	2																																																																																																2
GGCTCG	1	1																																																																																															2
GGCTCT	1																																																																																																1
GGCTGC	2	1																																																																																															3
GGGACC		1																																																																																															1
GGGTTG	1																																																																																																1
GGTCTT	1																																																																																																1
GGTGAC	1																																																																																																1
GGTGAG		1																																																																																															1
GGTGCT	1																																																																																																1
GGTGGC	1																																																																																																1
GGTTAT	1																																																																																																1
GGTTTG	1																																																																																																1
GTAAAA	1																																																																																																1
GTACAT		1																																																																																															1
GTAGTC	1																																																																																																1
GTAGTG								1																																																																																									1
GTCAAA	1																																																																																																1
GTCCAT	1																																																																																																1
GTCGCA	1																																																																																																1
GTGCTC	1																																																																																																1
GTGGCC	1																																																																																																1
GTGGGG	1																																																																																																1
GTGTGC	1																																																																																																1
GTTCTT	1																																																																																																1
GTTGAA	1																																																																																																1
GTTGCA	1																																																																																																1
GTTGGG	1																																																																																																1
GTTGTC	1																																																																																																1
GTTTGG	1																																																																																																1
GTTTTG	1																																																																																																1
TAAAAA	2		1																																																																																														3
TAAAAT	1																																																																																																1
TAAATT	1																																																																																																1
TAATTA	1																																																																																																1
TAATTG	1																																																																																																1
TACACA	1																																																																																																1
TACATT		1																																																																																															1
TACTAT	1																																																																																																1
TAGACA	1																																																																																																1
TATAAA	1																																																																																																1
TATAAT	1																																																																																																1
TATAGT	1																																																																																																1
TATCTT	1																																																																																																1
TATTAA	2																																																																																																2
TATTGG	1																																																																																																1
TATTTC	1																																																																																																1
TATTTT	8																																																																																																8
TCAATG	1																																																																																																1
TCACAT	1																																																																																																1
TCAGCC	1																																																																																																1
TCAGGT	1																																																																																																1
TCATCC									1																																																																																								1
TCATCG	2																																																																																																2
TCATTC	1																																																																																																1
TCATTT	1																																																																																																1
TCCAGC	1																																																																																																1
TCCCTC	2																																																																																																2
TCCCTG	1																																																																																																1
TCCTCA	1																																																																																																1
TCCTCG	1																																																																																																1
TCCTCT	1																																																																																																1
TCGATC	1																																																																																																1
TCGCAA	1																																																																																																1
TCGCAG	1																																																																																																1
TCGCTG	1																																																																																																1
TCGGGA	1																																																																																																1
TCGTCA	2																																																																																																2
TCGTCC	1																																																																																																1
TCGTCT	1																																																																																																1
TCTACT		1																																																																																															1
TCTGCA	1																																																																																																1
TCTGCG	1																																																																																																1
TCTGGC	1																																																																																																1
TCTGTC	1																																																																																																1
TCTTCA		1																																																																																															1
TCTTCC	1																																																																																																1
TCTTCG	1																																																																																																1
TCTTTA	1																																																																																																1
TCTTTC	1																																																																																																1
TCTTTT	3	1	1																																																																																														5
TGAATG	1																																																																																																1
TGACGC	1																																																																																																1
TGAGCG	1																																																																																																1
TGAGGA	1																																																																																																1
TGATGT	1																																																																																																1
TGCATA	1																																																																																																1
TGCCAC		1																																																																																															1
TGCCCT	1																																																																																																1
TGCGGC	1																																																																																																1
TGCGGT	1																																																																																																1
TGCTGT	1																																																																																																1
TGCTTC	1																																																																																																1
TGGAGC	1																																																																																																1
TGGCTA	1																																																																																																1
TGGGTT	2																																																																																																2
TGGTAG								1																																																																																									1
TGGTGA	1																																																																																																1
TGGTGT	1																																																																																																1
TGGTTG	1																																																																																																1
TGTATG	1																																																																																																1
TGTCGT	1																																																																																																1
TGTGAC	1																																																																																																1
TGTGGT	1																																																																																																1
TGTTGC	1																																																																																																1
TTAAAA	1																																																																																																1
TTAATA	6																																																																																																6
TTAATT	2																																																																																																2
TTACTA	1																																																																																																1
TTAGAT	1																																																																																																1
TTATAA		1																																																																																															1
TTATTT	3																																																																																																3
TTCGCC	1																																																																																																1
TTCTTA	1																																																																																																1
TTCTTG	1																																																																																																1
TTCTTT	2	3	1																																																																																														6
TTGCCA	1																																																																																																1
TTGGGG	1																																																																																																1
TTGGGT	1																																																																																																1
TTGTAG	1																																																																																																1
TTGTTA	1																																																																																																1
TTTAAT	2																																																																																																2
TTTATT	7		2																																																																																														9
TTTCAA	1																																																																																																1
TTTCAC	1																																																																																																1
TTTCAT	1																																																																																																1
TTTCCC		1																																																																																															1
TTTCCG	1																																																																																																1
TTTCTA	1																																																																																																1
TTTCTC	2																																																																																																2
TTTCTT	7	1		1																																																																																													9
TTTGAT		1																																																																																															1
TTTGTT	1																																																																																																1
TTTTAT	6	1	2			1																																																																																											10
TTTTCA	1																																																																																																1
TTTTCT	10	1																																																																																															11
TTTTGA			1																																																																																														1
TTTTGC		1																																																																																															1
TTTTGG	1																																																																																																1
TTTTTA	10	2																																																																																															12
TTTTTC	10		1																																																																																														11

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	40	42	34	34	34	30	24	16	23	17	7	12	5	3	8	3	11	5	9	7	9	6	6	4	8	1	4	1	5	2	3	1	5	1	2	2	2	3		2		3	1		1	1		1		3		1	1													1												1		445
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	7	5	4	2	3	1	1	1			1		1				2												1	1					1	1			1																			1																				1	42
AC/GT	-	-	-	39	15	5	4	4	4	3	3	2	3	2		2	1	2	1	2		1				1		1					1														3	1																																																	100
AG/CT	-	-	-	96	53	28	26	16	11	7	4	6	2	4	2		2	2		1	3				1	1																																																																							265
AT/AT	-	-	-	187	54	29	32	14	8	6	4	3	1	2	1		1																																																																																342
CG/CG	-	-	-	3			1																																																																																										4
AAC/GTT	-	-	18	10	10	2	3	1		2		1																																																																																					47
AAG/CTT	-	-	58	30	11	6	6	3	2	3					1			1				1	1				1			1	4																																																																		129
AAT/ATT	-	-	71	36	11	6	2	4		5	2						1														4																																																																		142
ACC/GGT	-	-	21	6	4		2	2			1																																																																																						36
ACG/CGT	-	-	10	1		1		1			1																																																																																						14
ACT/AGT	-	-	14	5	3	2	1	1	2												1	1					1				1																																																																		32
AGC/CTG	-	-	27	13	4	4		3																																																																																									51
AGG/CCT	-	-	12	5	5	3	3	1			1	1	2						1																																																																														34
ATC/ATG	-	-	24	11	2	3	1	1	1	1				1							1			1																																																																									47
CCG/CGG	-	-	20	3	1	2																																																																																											26
AAAC/GTTT	-	3																																																																																															3
AAAG/CTTT	-	53	28	18	3	1	3	3	1	1				1																																																																																			112
AAAT/ATTT	-	75	17	1	1	1	2	1																																																																																									98
AACC/GGTT	-	1		1																																																																																													2
AACT/AGTT	-	2			1																																																																																												3
AAGC/CTTG	-	2																																																																																															2
AAGG/CCTT	-	5																																																																																															5
AAGT/ACTT	-	1																																																																																															1
AATC/ATTG	-	16	5	4	2																																																																																												27
AATG/ATTC	-	6	2	1																																																																																													9
AATT/AATT	-	14			1	1																																																																																											16
ACAG/CTGT	-			1		1																																																																																											2
ACAT/ATGT	-	28	11	7	2	2	1	1																																																																																									52
ACCG/CGGT	-	1																																																																																															1
ACCT/AGGT	-	2			1		1																																																																																										4
ACGC/CGTG	-						1																																																																																										1
ACTC/AGTG	-	8		1																																																																																													9
ACTG/AGTC	-	3																																																																																															3
AGAT/ATCT	-	7	3		1																																																																																												11
AGCC/CTGG	-	1																																																																																															1
AGCG/CGCT	-	1																																																																																															1
AGCT/AGCT	-	1																																																																																															1
AGGG/CCCT	-	3																																																																																															3
ATCC/ATGG	-	5	1																																																																																														6
ATGC/ATGC	-	1																																																																																															1
AAAAC/GTTTT	14	3	1																																																																																														18
AAAAG/CTTTT	200	62	16	4	1																																																																																												283
AAAAT/ATTTT	161	29	6	4		1			1									1																																																																															203
AAACC/GGTTT	5																																																																																																5
AAACG/CGTTT	2	1																																																																																															3
AAACT/AGTTT	5																																																																																																5
AAAGC/CTTTG	3	2																																																																																															5
AAAGG/CCTTT	24																																																																																																24
AAAGT/ACTTT	2																																																																																																2
AAATC/ATTTG	7		1	1																																																																																													9
AAATG/ATTTC	11	1	1																																																																																														13
AAATT/AATTT	53	1	1																																																																																														55
AACAC/GTGTT	3																																																																																																3
AACAT/ATGTT	1																																																																																																1
AACCC/GGGTT	9																																																																																																9
AACCG/CGGTT	3																																																																																																3
AACCT/AGGTT	3	1																																																																																															4
AACGC/CGTTG	2																																																																																																2
AACTC/AGTTG	2																																																																																																2
AACTG/AGTTC	1																																																																																																1
AAGAC/CTTGT	5	1																																																																																															6
AAGAG/CTCTT	15	1	1																																																																																														17
AAGAT/ATCTT	1																																																																																																1
AAGCC/CTTGG	1																																																																																																1
AAGCT/AGCTT	1																																																																																																1
AAGGG/CCCTT	10	1																																																																																															11
AAGTC/ACTTG	4																																																																																																4
AAGTG/ACTTC	1																																																																																																1
AATAC/ATTGT	4																																																																																																4
AATAG/ATTCT	2	1																																																																																															3
AATAT/ATATT	34																																																																																																34
AATCC/ATTGG	8																																																																																																8
AATCT/AGATT	3																																																																																																3
AATGC/ATTGC	4	2																																																																																															6
AATGG/ATTCC	2	1																																																																																															3
AATGT/ACATT	2																																																																																																2
AATTC/AATTG	5	1																																																																																															6
ACACC/GGTGT	1																																																																																																1
ACACG/CGTGT	2																																																																																																2
ACACT/AGTGT	1	1																																																																																															2
ACAGC/CTGTG	1																																																																																																1
ACAGG/CCTGT	3																																																																																																3
ACAGT/ACTGT	10																																																																																																10
ACATC/ATGTG	5																																																																																																5
ACATG/ATGTC	3	1																																																																																															4
ACCAG/CTGGT	2																																																																																																2
ACCAT/ATGGT	7																																																																																																7
ACCCC/GGGGT	2																																																																																																2
ACCCG/CGGGT	1																																																																																																1
ACCCT/AGGGT	1	1																																																																																															2
ACCGG/CCGGT	1																																																																																																1
ACCGT/ACGGT	3																																																																																																3
ACCTC/AGGTG	1																																																																																																1
ACCTG/AGGTC	1																																																																																																1
ACGAG/CGTCT	3	1																																																																																															4
ACGAT/ATCGT	1																																																																																																1
ACGCC/CGTGG	1																																																																																																1
ACGGC/CCGTG	1																																																																																																1
ACGGG/CCCGT	2		1																																																																																														3
ACTAG/AGTCT	4	1																																																																																															5
ACTAT/AGTAT	3																																																																																																3
ACTCC/AGTGG	1																																																																																																1
ACTCG/AGTCG		1																																																																																															1
ACTCT/AGAGT	1																																																																																																1
ACTGG/AGTCC		1																																																																																															1
AGAGC/CTCTG	1																																																																																																1
AGAGG/CCTCT	7		1																																																																																														8
AGATC/ATCTG		2																																																																																															2
AGATG/ATCTC	9	2	1	1																																																																																													13
AGCAT/ATGCT	2																																																																																																2
AGCCC/CTGGG	2																																																																																																2
AGCCG/CGGCT	2																																																																																																2
AGCGG/CCGCT	1																																																																																																1
AGCTC/AGCTG	7																																																																																																7
AGGAT/ATCCT	5																																																																																																5
AGGCG/CCTCG	2	1																																																																																															3
AGGGG/CCCCT	8	1																																																																																															9
ATATC/ATATG	7																																																																																																7
ATCCC/ATGGG	5	1																																																																																															6
ATCGC/ATGCG	1																																																																																																1
AAAAAC/GTTTTT	4	1																																																																																															5
AAAAAG/CTTTTT	81	17	4	2																																																																																													104
AAAAAT/ATTTTT	74	10	6			1																																																																																											91
AAAACC/GGTTTT	2																																																																																																2
AAAAGC/CTTTTG	3	1																																																																																															4
AAAAGG/CCTTTT	7	1																																																																																															8
AAAAGT/ACTTTT	2																																																																																																2
AAAATC/ATTTTG		1	1																																																																																														2
AAAATG/ATTTTC	7																																																																																																7
AAAATT/AATTTT	9																																																																																																9
AAACAC/GTGTTT	1																																																																																																1
AAACAG/CTGTTT		1																																																																																															1
AAACCC/GGGTTT	5	1																																																																																															6
AAACGG/CCGTTT	1																																																																																																1
AAACTG/AGTTTC	1																																																																																																1
AAAGAC/CTTTGT	2																																																																																																2
AAAGAG/CTCTTT	6	1	1																																																																																														8
AAAGAT/ATCTTT	2																																																																																																2
AAAGGG/CCCTTT	2	1	1																																																																																														4
AAAGGT/ACCTTT	1																																																																																																1
AAAGTC/ACTTTG	1																																																																																																1
AAAGTG/ACTTTC	1																																																																																																1
AAATAG/ATTTCT	2																																																																																																2
AAATAT/ATATTT	2		1																																																																																														3
AAATCC/ATTTGG	1																																																																																																1
AAATCT/AGATTT	2																																																																																																2
AAATGG/ATTTCC	1	1																																																																																															2
AAATGT/ACATTT		1																																																																																															1
AAATTG/AATTTC	1																																																																																																1
AAATTT/AAATTT	2	1																																																																																															3
AACAAG/CTTGTT	4	2																																																																																															6
AACAAT/ATTGTT	1																																																																																																1
AACACC/GGTGTT	2	1																																																																																															3
AACAGC/CTGTTG	5	1	1																																																																																														7
AACAGG/CCTGTT	3																																																																																																3
AACATC/ATGTTG	3																																																																																																3
AACATG/ATGTTC	1																																																																																																1
AACCAC/GGTTGT	4																																																																																																4
AACCAT/ATGGTT	1																																																																																																1
AACCCC/GGGGTT	4																																																																																																4
AACCCG/CGGGTT	2																																																																																																2
AACCGC/CGGTTG	1																																																																																																1
AACCTC/AGGTTG	1																																																																																																1
AACCTG/AGGTTC	1																																																																																																1
AACGAC/CGTTGT	3																																																																																																3
AACGCC/CGTTGG			1																																																																																														1
AACGTC/ACGTTG	1																																																																																																1
AACTAC/AGTTGT	2																																																																																																2
AACTAT/AGTTAT	1																																																																																																1
AACTGC/AGTTGC	1																																																																																																1
AACTTC/AAGTTG	1																																																																																																1
AAGAAT/ATTCTT	1																																																																																																1
AAGACC/CTTGGT	1																																																																																																1
AAGACG/CGTCTT	4																																																																																																4
AAGAGG/CCTCTT	9	1																																																																																															10
AAGATG/ATCTTC		1																																																																																															1
AAGCAG/CTGCTT	3																																																																																																3
AAGCCG/CGGCTT	1		1																																																																																														2
AAGCGG/CCGCTT	1																																																																																																1
AAGGAC/CCTTGT	1																																																																																																1
AAGGAG/CCTTCT	1																																																																																																1
AAGGCG/CCTTCG	1																																																																																																1
AAGGGC/CCCTTG	2																																																																																																2
AAGTAG/ACTTCT	1	1																																																																																															2
AAGTCC/ACTTGG	2																																																																																																2
AAGTGG/ACTTCC	1																																																																																																1
AATACC/ATTGGT	1																																																																																																1
AATAGT/ACTATT	2																																																																																																2
AATATT/AATATT	14																																																																																																14
AATCAC/ATTGTG	2																																																																																																2
AATCAT/ATGATT	4																																																																																																4
AATCCC/ATTGGG		1	1																																																																																														2
AATCGC/ATTGCG	1																																																																																																1
AATGAG/ATTCTC	3																																																																																																3
AATGCC/ATTGGC	2																																																																																																2
AATGGC/ATTGCC	2																																																																																																2
AATGGG/ATTCCC	1																																																																																																1
AATGGT/ACCATT	1																																																																																																1
AATGTC/ACATTG	1																																																																																																1
AATGTG/ACATTC	2																																																																																																2
AATTAC/AATTGT	1																																																																																																1
AATTAG/AATTCT	1																																																																																																1
AATTAT/AATTAT	9	1																																																																																															10
AATTCC/AATTGG	1																																																																																																1
ACACAG/CTGTGT	1																																																																																																1
ACACAT/ATGTGT	2																																																																																																2
ACACCC/GGGTGT		1																																																																																															1
ACACGC/CGTGTG	1																																																																																																1
ACAGAG/CTCTGT	1																																																																																																1
ACAGCG/CGCTGT	1																																																																																																1
ACAGGC/CCTGTG		1																																																																																															1
ACAGGG/CCCTGT	2																																																																																																2
ACAGTC/ACTGTG	1																																																																																																1
ACATAG/ATGTCT	1																																																																																																1
ACATAT/ATATGT	3																																																																																																3
ACATCT/AGATGT	1																																																																																																1
ACATGC/ATGTGC	1																																																																																																1
ACATGG/ATGTCC	2																																																																																																2
ACATGT/ACATGT	1	1																																																																																															2
ACCACG/CGTGGT	1																																																																																																1
ACCACT/AGTGGT	2							2																																																																																									4
ACCAGC/CTGGTG	2	1																																																																																															3
ACCATC/ATGGTG	4																																																																																																4
ACCATG/ATGGTC	1																																																																																																1
ACCCCC/GGGGGT	1																																																																																																1
ACCCTC/AGGGTG		1																																																																																															1
ACCCTG/AGGGTC	1																																																																																																1
ACCGAG/CGGTCT	1																																																																																																1
ACCGCC/CGGTGG	2																																																																																																2
ACCGGC/CCGGTG		1																																																																																															1
ACCGGG/CCCGGT		1																																																																																															1
ACCGTC/ACGGTG	1																																																																																																1
ACCTAT/AGGTAT	1																																																																																																1
ACCTCC/AGGTGG		1																																																																																															1
ACCTCG/AGGTCG	1																																																																																																1
ACCTGC/AGGTGC	1																																																																																																1
ACGACT/AGTCGT	1																																																																																																1
ACGAGC/CGTGCT	1																																																																																																1
ACGAGG/CCTCGT	5																																																																																																5
ACGATC/ATCGTG	2																																																																																																2
ACGATG/ATCGTC	9						1																																																																																										10
ACGCAG/CGTCTG	1																																																																																																1
ACGCGG/CCGCGT	1																																																																																																1
ACGCTC/AGCGTG	2																																																																																																2
ACGCTG/AGCGTC	2																																																																																																2
ACGGAG/CCGTCT	1																																																																																																1
ACGGCC/CCGTGG	3																																																																																																3
ACGTAG/ACGTCT		1																																																																																															1
ACTATG/AGTCAT	1																																																																																																1
ACTCAG/AGTCTG	1																																																																																																1
ACTCAT/AGTATG	1																																																																																																1
ACTCCC/AGTGGG	1																																																																																																1
ACTCCG/AGTCGG	1																																																																																																1
ACTCGC/AGTGCG	1																																																																																																1
ACTCTC/AGAGTG	1																																																																																																1
ACTGAT/AGTATC	1																																																																																																1
ACTGCC/AGTGGC	2	1																																																																																															3
ACTGCG/AGTCGC	2																																																																																																2
ACTGCT/AGCAGT	3																																																																																																3
ACTGGC/AGTGCC	1																																																																																																1
AGAGCC/CTCTGG	4																																																																																																4
AGAGCG/CGCTCT	2																																																																																																2
AGAGCT/AGCTCT	1		1																																																																																														2
AGAGGC/CCTCTG	1																																																																																																1
AGAGGG/CCCTCT	6	1	1																																																																																														8
AGATCG/ATCTCG	1																																																																																																1
AGATGC/ATCTGC	1																																																																																																1
AGCAGG/CCTGCT	2	1																																																																																															3
AGCATC/ATGCTG	3																																																																																																3
AGCCAT/ATGGCT	1																																																																																																1
AGCCCC/CTGGGG	1	1																																																																																															2
AGCCCG/CGGGCT	1	1																																																																																															2
AGCCGC/CGGCTG	6	2																																																																																															8
AGCCGG/CCGGCT	4																																																																																																4
AGCCTC/AGGCTG	1																																																																																																1
AGCCTG/AGGCTC	4		1																																																																																														5
AGCGAT/ATCGCT		1																																																																																															1
AGCGCG/CGCGCT	1																																																																																																1
AGCGGC/CCGCTG		2																																																																																															2
AGCGGG/CCCGCT	1																																																																																																1
AGCTCC/AGCTGG	5																																																																																																5
AGCTGC/AGCTGC	1																																																																																																1
AGGATC/ATCCTG	1																																																																																																1
AGGATG/ATCCTC	8	1							1																																																																																								10
AGGCGC/CCTGCG	1	1																																																																																															2
AGGCGG/CCGCCT	3																																																																																																3
AGGGAT/ATCCCT	1																																																																																																1
AGGGGG/CCCCCT	2																																																																																																2
ATATCC/ATATGG	1																																																																																																1
ATATCG/ATATCG	1																																																																																																1
ATATGC/ATATGC	1																																																																																																1
ATCCCC/ATGGGG	1																																																																																																1
ATCCCG/ATCGGG	2																																																																																																2
ATCGCC/ATGGCG	2																																																																																																2
ATCGGC/ATGCCG	2																																																																																																2
CCCGCG/CGCGGG	1																																																																																																1
CCGGCG/CCGGCG	1																																																																																																1
