Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-7/megassr/results/hub_GCA_039267505.1/fasta/hub_GCA_039267505.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              80
Total size of examined sequences (bp):           37275144
Total number of identified SSRs:                 3588
Number of SSR containing sequences:              58
Number of sequences containing more than 1 SSR:  44
Number of SSRs present in compound formation:    296


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	475
2	704
3	555
4	371
5	893
6	590

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	22	11	20	21	14	9	10	6	10	4	5	2	2	4	3	7	2	4	3	3	1	1	1	1	3	2		3	1		2	1	2	3	2		1		2		2													1									1												1														214
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	3	1			1						1				1				1					2							1					1	1																																																				14
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	3	2	2	2	3		1																				1													1																																																	18
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	22	17	24	21	13	12	10	8	13	10	4	5	6	1	5	3	6	4	2	1	4	1	5		3	1	3		3	3	3	1	2						3	1	1	1			1			2				1	1																1																				1	229
AC	-	-	-	5	6		2	1			2		1	1		1						1					1																					1																																																											22
AG	-	-	-	33	17	4	11	4	5	1	3	3	1	1	1			3				1				1																																																																																	89
AT	-	-	-	79	30	15	18	9	5	4	3	2		1			1																																																																																										167
CA	-	-	-	15	3	1	1	1	2	2		1							1	1																																																																																							28
CT	-	-	-	16	6	7	2	1	4	1	1	1		1	1										1																																																																																		42
GA	-	-	-	17	11	5	5	1		2		1	1				1				2																																																																																						46
GC	-	-	-	3			1																																																																																																				4
GT	-	-	-	13	1	1		1	1		1	1				1										1							1														2																																																												24
TA	-	-	-	103	23	12	14	5	3	2	1	1	1	1	1																																																																																												167
TC	-	-	-	31	18	12	9	8	2	4		1		2						1																																																																																							88
TG	-	-	-	6	7	2		1	1	1		1	1	1			1	2		1																											2																																																												27
AAC	-	-		1		1				1																																																																																																	3
AAG	-	-	13	8	2		2		1														1				1																																																																																28
AAT	-	-	17	7	2	1		1		3																					1																																																																												32
ACA	-	-	3		2																																																																																																						5
ACC	-	-	4	1	1		1				1																																																																																																8
ACG	-	-	1			1																																																																																																					2
ACT	-	-	2	2	1			1																			1																																																																																7
AGA	-	-	9	5	1		1	1																																																																																																			17
AGC	-	-	2	2	1	1																																																																																																					6
AGG	-	-		1		1		1																																																																																																			3
AGT	-	-	1																												1																																																																												2
ATA	-	-	7	10	3	1				1																					1																																																																												23
ATC	-	-	2					1																																																																																																			3
ATG	-	-	3	2		2																																																																																																					7
ATT	-	-	9	4	3	2					1																																																																																																19
CAA	-	-	8	3	1	1	1	1																																																																																																			15
CAC	-	-	3	1	2		1																																																																																																				7
CAG	-	-	6	1		1		1																																																																																																			9
CAT	-	-	3	2	1																																																																																																						6
CCA	-	-	6					1																																																																																																			7
CCG	-	-	4		1																																																																																																						5
CCT	-	-			1		1					1	1																																																																																														4
CGA	-	-	2	1																																																																																																							3
CGC	-	-	2																																																																																																								2
CGG	-	-	2	1		1																																																																																																					4
CTA	-	-	1			1															1																																																																																						3
CTC	-	-	2	1							1																																																																																																4
CTG	-	-	4	2	2	1																																																																																																					9
CTT	-	-	9	4	1	2	1								1																2																																																																												20
GAA	-	-	11	2	3	1	1	1		1								1				1								1	1																																																																												24
GAC	-	-	1								1																																																																																																2
GAG	-	-	6	1	1	1																																																																																																					9
GAT	-	-	8			1	1		1					1							1																																																																																						13
GCA	-	-	3	2		1																																																																																																					6
GCC	-	-	5																																																																																																								5
GCG	-	-	4			1																																																																																																					5
GCT	-	-	3	3																																																																																																							6
GGA	-	-	4	2	2		1																	1																																																																																			10
GGC	-	-	3	2																																																																																																							5
GGT	-	-	3	3																																																																																																							6
GTA	-	-	6	1																																																																																																							7
GTC	-	-	4																																																																																																								4
GTG	-	-	3		1																																																																																																						4
GTT	-	-	3	1	2		2				1																																																																																																9
TAA	-	-	8	3	1	1	1																																																																																																				14
TAC	-	-	1	1			1																																																																																																				3
TAG	-	-	3	1	2	1			2													1																																																																																					10
TAT	-	-	12	9		1		2		1	1						1																																																																																										27
TCA	-	-	5	1	1																																																																																																						7
TCC	-	-			1		2												1																																																																																								4
TCG	-	-	2					1																																																																																																			3
TCT	-	-	6	4	2	1				1																					1																																																																												15
TGA	-	-	3	6						1														1																																																																																			11
TGC	-	-	9	3	1			2																																																																																																			15
TGG	-	-	2	1				1																																																																																																			4
TGT	-	-	4	2	5																																																																																																						11
TTA	-	-	17	2	2		1	1																							1																																																																												24
TTC	-	-	9	7	2	2	1	1	1	1																																																																																																	24
TTG	-	-	1	3								1																																																																																															5
AAAG	-	15	6	6			1		1	1																																																																																																	30
AAAT	-	17	7																																																																																																								24
AAGA	-	2	5	2																																																																																																							9
AATA	-	5					1																																																																																																				6
AATC	-	3	1																																																																																																								4
AATT	-	8				1																																																																																																					9
ACAG	-					1																																																																																																					1
ACAT	-	4			1	1																																																																																																					6
ACCG	-	1																																																																																																									1
AGAA	-	4	1	3	1																																																																																																						9
AGAC	-			1																																																																																																							1
AGAT	-	1	1																																																																																																								2
AGCA	-	1																																																																																																									1
AGGA	-	1																																																																																																									1
AGTC	-	1																																																																																																									1
AGTG	-	1																																																																																																									1
ATAA	-	7	1	1																																																																																																							9
ATAC	-	6																																																																																																									6
ATAG	-	1	1																																																																																																								2
ATCA	-	2	2																																																																																																								4
ATCC	-	1																																																																																																									1
ATGG	-	2																																																																																																									2
ATGT	-	1		2																																																																																																							3
ATTA	-	1			1																																																																																																						2
ATTC	-	1	1																																																																																																								2
ATTG	-	1																																																																																																									1
ATTT	-	6	1			1																																																																																																					8
CAAC	-			1																																																																																																							1
CAAG	-	1																																																																																																									1
CAAT	-	1	1																																																																																																								2
CACT	-	1																																																																																																									1
CATA	-	2	2			1																																																																																																					5
CCCT	-	1																																																																																																									1
CGCT	-	1																																																																																																									1
CGTG	-						1																																																																																																				1
CTAC	-				1																																																																																																						1
CTAT	-	2																																																																																																									2
CTCA	-	2																																																																																																									2
CTCC	-	1																																																																																																									1
CTTC	-	2																																																																																																									2
CTTT	-	2	6	2										1																																																																																													11
GAAA	-	1	1	2			1	1																																																																																																			6
GAAT	-	1	1																																																																																																								2
GATA	-	1																																																																																																									1
GATG	-	1	1																																																																																																								2
GATT	-	1		1	1																																																																																																						3
GCCA	-	1																																																																																																									1
GGAG	-	1																																																																																																									1
GTAG	-	2																																																																																																									2
GTAT	-	2	2																																																																																																								4
GTCA	-	1																																																																																																									1
GTGA	-	2																																																																																																									2
GTTA	-				1																																																																																																						1
TAAA	-	11	2																																																																																																								13
TAAT	-	2																																																																																																									2
TACA	-	4	3	1			1																																																																																																				9
TACT	-	1																																																																																																									1
TAGC	-	1																																																																																																									1
TAGG	-						1																																																																																																				1
TAGT	-	2																																																																																																									2
TATC	-				1																																																																																																						1
TATG	-	2	1		1			1																																																																																																			5
TATT	-	6																																																																																																									6
TCAA	-	1																																																																																																									1
TCAC	-	2	1																																																																																																								3
TCAT	-	3		1																																																																																																							4
TCCA	-	1																																																																																																									1
TCCT	-	2																																																																																																									2
TCTA	-	2	1																																																																																																								3
TCTT	-	7	2	1	1																																																																																																						11
TGAC	-	1																																																																																																									1
TGAT	-	2																																																																																																									2
TGCA	-	1																																																																																																									1
TGTA	-	7	3	4																																																																																																							14
TTAA	-	3																																																																																																									3
TTAT	-	5	1		1																																																																																																						7
TTCA	-	1																																																																																																									1
TTCT	-	4	1	1																																																																																																							6
TTGA	-	5	1	3	1																																																																																																						10
TTGG	-	1																																																																																																									1
TTGT	-	1																																																																																																									1
TTTA	-	15	5				1	1																																																																																																			22
TTTC	-	17	6	2	1	1	1	2																																																																																																			30
TTTG	-	2																																																																																																									2
AAAAC	4	2																																																																																																									6
AAAAG	52	15	9	2																																																																																																							78
AAAAT	31	10	2			1			1																																																																																																		45
AAACA	1		1																																																																																																								2
AAACC	1																																																																																																										1
AAACG		1																																																																																																									1
AAAGA	19	5																																																																																																									24
AAAGG	5																																																																																																										5
AAATA	9	1																																																																																																									10
AAATC	2		1	1																																																																																																							4
AAATG	2																																																																																																										2
AAATT	5																																																																																																										5
AACAA	1																																																																																																										1
AACCC	1																																																																																																										1
AACTA	3																																																																																																										3
AAGAA	11	6																																																																																																									17
AAGAG	1																																																																																																										1
AAGGA	2																																																																																																										2
AAGGG	1																																																																																																										1
AAGTC	2																																																																																																										2
AAGTG	1																																																																																																										1
AATAA	11	1																																																																																																									12
AATAT	4																																																																																																										4
AATCC	2																																																																																																										2
AATCT	1																																																																																																										1
AATGA	2																																																																																																										2
AATTA	4																																																																																																										4
AATTC	1																																																																																																										1
AATTG	1																																																																																																										1
AATTT	1																																																																																																										1
ACAAA	1																																																																																																										1
ACAAC	2																																																																																																										2
ACACC	1																																																																																																										1
ACAGT	1																																																																																																										1
ACATG	1																																																																																																										1
ACCAA	1																																																																																																										1
ACCCA	1																																																																																																										1
ACCGT	1																																																																																																										1
ACCTG	1																																																																																																										1
ACGAA	1																																																																																																										1
ACGCA	1																																																																																																										1
ACTAG	1																																																																																																										1
ACTGT	1																																																																																																										1
AGAAA	16	1																																																																																																									17
AGAAG	4																																																																																																										4
AGACA	2																																																																																																										2
AGACT	1																																																																																																										1
AGAGA	2																																																																																																										2
AGATC		1																																																																																																									1
AGATG	1																																																																																																										1
AGCAA		1																																																																																																									1
AGCCA	1																																																																																																										1
AGCCC	1																																																																																																										1
AGCTA	1																																																																																																										1
AGCTG	1																																																																																																										1
AGGAA	1																																																																																																										1
AGGAT	1																																																																																																										1
AGGCG	1																																																																																																										1
AGGGA	3																																																																																																										3
AGGGG	1																																																																																																										1
AGGTG	1																																																																																																										1
AGTAC	3																																																																																																										3
AGTCA	1																																																																																																										1
ATAAA	17																																																																																																										17
ATAAT	2																																																																																																										2
ATACC	1																																																																																																										1
ATAGG	1																																																																																																										1
ATAGT	1																																																																																																										1
ATATA	3																																																																																																										3
ATATT	9																																																																																																										9
ATCCC	1																																																																																																										1
ATCTA	1																																																																																																										1
ATCTC	1																																																																																																										1
ATGAG	1																																																																																																										1
ATGAT	3																																																																																																										3
ATGCA	2	1																																																																																																									3
ATGGG		1																																																																																																									1
ATGTA	1																																																																																																										1
ATGTG	1																																																																																																										1
ATTAA	10		1																																																																																																								11
ATTAT	1																																																																																																										1
ATTCA	2																																																																																																										2
ATTTA	2																																																																																																										2
ATTTC	1																																																																																																										1
ATTTG	2																																																																																																										2
ATTTT	9	4	1															1																																																																																									15
CAAAA	1																																																																																																										1
CAAAG	1	1																																																																																																									2
CAAAT	1																																																																																																										1
CAACA	1																																																																																																										1
CAAGA		1																																																																																																									1
CAAGT	1																																																																																																										1
CAATA	2																																																																																																										2
CAATG	1																																																																																																										1
CACAT	1																																																																																																										1
CAGAT		1																																																																																																									1
CAGCC	1																																																																																																										1
CAGGA	1																																																																																																										1
CATAC	2																																																																																																										2
CATCT	2			1																																																																																																							3
CATGT	1																																																																																																										1
CATTT	2																																																																																																										2
CCAAA	1																																																																																																										1
CCAAC	3																																																																																																										3
CCACC	1																																																																																																										1
CCAGT		1																																																																																																									1
CCATA	1																																																																																																										1
CCATT	1	1																																																																																																									2
CCCAA	1																																																																																																										1
CCCAT	2																																																																																																										2
CCCCT	2																																																																																																										2
CCCGA	1																																																																																																										1
CCCTC	1																																																																																																										1
CCCTT	2																																																																																																										2
CCGGT	1																																																																																																										1
CCGTG	1																																																																																																										1
CCTAA		1																																																																																																									1
CCTCC		1																																																																																																									1
CCTCT	1																																																																																																										1
CCTTT	3																																																																																																										3
CGACT		1																																																																																																									1
CGATA	1																																																																																																										1
CGGCT	1																																																																																																										1
CGTCT	1	1																																																																																																									2
CTACA		1																																																																																																									1
CTAGT		1																																																																																																									1
CTATC	2																																																																																																										2
CTATG	1																																																																																																										1
CTCAA	1																																																																																																										1
CTCAG	1																																																																																																										1
CTCAT	1																																																																																																										1
CTCCA	1																																																																																																										1
CTCTA	1																																																																																																										1
CTCTT	1																																																																																																										1
CTTCC	2																																																																																																										2
CTTCT	1																																																																																																										1
CTTTC	2																																																																																																										2
CTTTG	1																																																																																																										1
CTTTT	13	6		2																																																																																																							21
GAAAA	11	3	2																																																																																																								16
GAAAC	1																																																																																																										1
GAAAG	1																																																																																																										1
GAAAT	1																																																																																																										1
GAACC	1																																																																																																										1
GAAGA	1																																																																																																										1
GAAGG	1																																																																																																										1
GAATA	1																																																																																																										1
GAATT	1																																																																																																										1
GACAA	1																																																																																																										1
GACGG	1																																																																																																										1
GAGAA	1																																																																																																										1
GAGAC	1																																																																																																										1
GAGAG	1																																																																																																										1
GAGAT	1	2	1																																																																																																								4
GAGGA	1																																																																																																										1
GAGGG	1																																																																																																										1
GATAA	1																																																																																																										1
GATGA	1																																																																																																										1
GATGC	1																																																																																																										1
GATGG	1																																																																																																										1
GATGT	1																																																																																																										1
GATTG	3																																																																																																										3
GCAAA	1																																																																																																										1
GCAAC	1																																																																																																										1
GCCTC	1																																																																																																										1
GCGTG	1																																																																																																										1
GCTCA	2																																																																																																										2
GCTGA	2																																																																																																										2
GGAAA	3																																																																																																										3
GGAAG		1																																																																																																									1
GGAAT	1																																																																																																										1
GGACA	1																																																																																																										1
GGAGA	2		1																																																																																																								3
GGAGC	1																																																																																																										1
GGCTC	1																																																																																																										1
GGGAA	1																																																																																																										1
GGGAC			1																																																																																																								1
GGGAG	1																																																																																																										1
GGGAT	1																																																																																																										1
GGGGA	1																																																																																																										1
GGGTG	1																																																																																																										1
GGTAG		1																																																																																																									1
GGTCT	1																																																																																																										1
GGTTC	1																																																																																																										1
GTACA	2																																																																																																										2
GTATG	2																																																																																																										2
GTCAT		1																																																																																																									1
GTCCC	1																																																																																																										1
GTCCT	1																																																																																																										1
GTCTA	1																																																																																																										1
GTCTG	1																																																																																																										1
GTCTT	1																																																																																																										1
GTTAG	1																																																																																																										1
GTTGA	1																																																																																																										1
GTTGG	1																																																																																																										1
GTTTA	1																																																																																																										1
TAAAA	13	1																																																																																																									14
TAAAT	2	1																																																																																																									3
TAACA	1																																																																																																										1
TAACC	1																																																																																																										1
TAATA	2																																																																																																										2
TAATC	1																																																																																																										1
TAATG	1																																																																																																										1
TAATT	6																																																																																																										6
TACAC	1																																																																																																										1
TACAG	1																																																																																																										1
TACCC	1																																																																																																										1
TACGG	2																																																																																																										2
TACTG	1																																																																																																										1
TAGAA	1																																																																																																										1
TAGGT	1																																																																																																										1
TAGTA	1																																																																																																										1
TAGTC	1																																																																																																										1
TATAA	3																																																																																																										3
TATAC	1																																																																																																										1
TATAT	5																																																																																																										5
TATGG	1																																																																																																										1
TATTA	3																																																																																																										3
TATTT	11	2	1	1																																																																																																							15
TCAAA	1																																																																																																										1
TCATA	1																																																																																																										1
TCATT		1	1																																																																																																								2
TCCAA	1																																																																																																										1
TCCCC	1																																																																																																										1
TCCTA	1																																																																																																										1
TCCTC	2																																																																																																										2
TCGCC		1																																																																																																									1
TCGGT	1																																																																																																										1
TCGTG	1																																																																																																										1
TCTAT		1																																																																																																									1
TCTCG	1																																																																																																										1
TCTCT	2	1	1																																																																																																								4
TCTGC	1																																																																																																										1
TCTTC	2																																																																																																										2
TCTTT	12	3			1																																																																																																						16
TGAAA	2																																																																																																										2
TGACA	1																																																																																																										1
TGAGA	1																																																																																																										1
TGAGC	1																																																																																																										1
TGATA	3																																																																																																										3
TGATG	1																																																																																																										1
TGATT	1																																																																																																										1
TGCTA	1																																																																																																										1
TGCTG	1																																																																																																										1
TGGAT	2																																																																																																										2
TGGGT	1																																																																																																										1
TGTAC	1																																																																																																										1
TGTAT	1																																																																																																										1
TGTCG	1																																																																																																										1
TGTCT	1																																																																																																										1
TGTGA	1																																																																																																										1
TGTTT	1	1																																																																																																									2
TTAAA	5																																																																																																										5
TTAAT	12																																																																																																										12
TTACT	1																																																																																																										1
TTAGT	1																																																																																																										1
TTATA	2																																																																																																										2
TTATT	11	3																																																																																																									14
TTCAG	1																																																																																																										1
TTCCT	2																																																																																																										2
TTCTT	9	3																																																																																																									12
TTGAA		1																																																																																																									1
TTGCA	1	1																																																																																																									2
TTGGG	1																																																																																																										1
TTGGT	1																																																																																																										1
TTGTA	1																																																																																																										1
TTGTT	1																																																																																																										1
TTTAA	6																																																																																																										6
TTTAC	1																																																																																																										1
TTTAT	20	2		2																																																																																																							24
TTTCA	1																																																																																																										1
TTTCC	5																																																																																																										5
TTTCT	15	6	2																																																																																																								23
TTTGG	1																																																																																																										1
TTTGT	1																																																																																																										1
TTTTA	23	3	2	1																																																																																																							29
TTTTC	43	14	2	1																																																																																																							60
TTTTG	3																																																																																																										3
AAAAAG	13	6	1	1																																																																																																							21
AAAAAT	16	5	1																																																																																																								22
AAAACA	2																																																																																																										2
AAAAGA	8	5																																																																																																									13
AAAAGG	1	1																																																																																																									2
AAAAGT	1																																																																																																										1
AAAATA	12	1				1																																																																																																					14
AAAATG	2																																																																																																										2
AAAATT	2																																																																																																										2
AAACCA	1																																																																																																										1
AAACCC	1																																																																																																										1
AAAGAA	7	1																																																																																																									8
AAAGAG	1																																																																																																										1
AAAGCA	1																																																																																																										1
AAAGGA	1																																																																																																										1
AAAGGG			1																																																																																																								1
AAAGGT	1																																																																																																										1
AAATAA	6																																																																																																										6
AAATAT			1																																																																																																								1
AAATCC	1																																																																																																										1
AAATCT	1																																																																																																										1
AAATTA	1																																																																																																										1
AACACA	1																																																																																																										1
AACCCC	1																																																																																																										1
AACGGA	1																																																																																																										1
AAGAAA	5		1																																																																																																								6
AAGAAC	1																																																																																																										1
AAGAGG		1																																																																																																									1
AAGCCG			1																																																																																																								1
AATAAA	2		1																																																																																																								3
AATACC	1																																																																																																										1
AATCTA	1																																																																																																										1
AATGAA	1																																																																																																										1
AATGTA		1																																																																																																									1
AATTTA	1																																																																																																										1
AATTTT	1																																																																																																										1
ACAACC	1																																																																																																										1
ACAACT	1																																																																																																										1
ACAAGA		1																																																																																																									1
ACAATT	1																																																																																																										1
ACAGCA	1																																																																																																										1
ACCACT								1																																																																																																			1
ACCCAA	1																																																																																																										1
ACCCCA	1																																																																																																										1
ACCGCC	1																																																																																																										1
ACGACC	1																																																																																																										1
ACGATG	1																																																																																																										1
ACGCTC	1																																																																																																										1
ACGTCA	1																																																																																																										1
ACTTGG	1																																																																																																										1
ACTTTG	1																																																																																																										1
AGAAAA	1	2																																																																																																									3
AGAAAG	1																																																																																																										1
AGACGT		1																																																																																																									1
AGAGAA	1																																																																																																										1
AGAGAC	1																																																																																																										1
AGAGCT	1																																																																																																										1
AGATCG	1																																																																																																										1
AGCGGG	1																																																																																																										1
AGCTGC	1																																																																																																										1
AGGAAC	1																																																																																																										1
AGGACA	1																																																																																																										1
AGGAGC	1																																																																																																										1
AGGCGA	1																																																																																																										1
AGGCGC	1																																																																																																										1
AGGCGG	1																																																																																																										1
AGGGCA	1																																																																																																										1
AGGGTC	1																																																																																																										1
AGTAGA		1																																																																																																									1
AGTAGC	1																																																																																																										1
AGTATC	1																																																																																																										1
AGTGAG	1																																																																																																										1
ATAAAA	5																																																																																																										5
ATAAAT	1																																																																																																										1
ATAACT	1																																																																																																										1
ATAATC	1																																																																																																										1
ATAATT	1																																																																																																										1
ATAGTA	1																																																																																																										1
ATAGTC	1																																																																																																										1
ATATTA	1																																																																																																										1
ATCAAA			1																																																																																																								1
ATCACA	1																																																																																																										1
ATCCCA			1																																																																																																								1
ATCCCC	1																																																																																																										1
ATCCTC	2																																																																																																										2
ATCGCC	1																																																																																																										1
ATCGTG	1																																																																																																										1
ATCTAC	1																																																																																																										1
ATGAAC	1																																																																																																										1
ATGACG	1																																																																																																										1
ATGAGA	1																																																																																																										1
ATGATT	1																																																																																																										1
ATGCCA	2																																																																																																										2
ATGCTG	1																																																																																																										1
ATGGTA	1																																																																																																										1
ATGGTC	1																																																																																																										1
ATGTAC	1																																																																																																										1
ATGTCT	1																																																																																																										1
ATTAAT	4																																																																																																										4
ATTATA	4																																																																																																										4
ATTCAC	1																																																																																																										1
ATTTAA	1	1																																																																																																									2
CAACAC	1																																																																																																										1
CAACAG	1		1																																																																																																								2
CAACCC	1																																																																																																										1
CAAGAA	1																																																																																																										1
CACACC		1																																																																																																									1
CACATA	1																																																																																																										1
CACCAA	1																																																																																																										1
CACGGC	1																																																																																																										1
CACTAC								1																																																																																																			1
CACTGC	1																																																																																																										1
CAGCTC	1																																																																																																										1
CAGGAA	1																																																																																																										1
CAGGCT	1																																																																																																										1
CAGTCA	1																																																																																																										1
CATAAT	1																																																																																																										1
CATACT	1																																																																																																										1
CATAGC	1																																																																																																										1
CATCAC	1																																																																																																										1
CATTTC	1	1																																																																																																									2
CATTTT	1																																																																																																										1
CCAAAC	2																																																																																																										2
CCACCT		1																																																																																																									1
CCACGG	1																																																																																																										1
CCATGT	1																																																																																																										1
CCATTC	1																																																																																																										1
CCCAAT		1																																																																																																									1
CCCCAC	1																																																																																																										1
CCCCCT	1																																																																																																										1
CCCTCT	1		1																																																																																																								2
CCGAGA	1																																																																																																										1
CCGATG	1																																																																																																										1
CCGCGC	1																																																																																																										1
CCTATC	1																																																																																																										1
CCTCAC		1																																																																																																									1
CCTCCG	1																																																																																																										1
CCTCTG	1																																																																																																										1
CCTGCA	1																																																																																																										1
CCTTGC	1																																																																																																										1
CCTTTC	1																																																																																																										1
CGACTC	1																																																																																																										1
CGAGGA	1																																																																																																										1
CGATAG		1																																																																																																									1
CGATCA	1																																																																																																										1
CGCACT	1																																																																																																										1
CGCCTC	1																																																																																																										1
CGCTCA	1																																																																																																										1
CGGAGC	1																																																																																																										1
CGGCTC	1																																																																																																										1
CGGGTT	1																																																																																																										1
CGTCCG	1																																																																																																										1
CGTCCT	1																																																																																																										1
CGTCTC	1																																																																																																										1
CTATAC	1																																																																																																										1
CTCATC	3																																																																																																										3
CTCGTC	1																																																																																																										1
CTCTCC	1																																																																																																										1
CTCTTC	1																																																																																																										1
CTCTTT		1																																																																																																									1
CTGAGC	1																																																																																																										1
CTGATG	1																																																																																																										1
CTGCGA	1																																																																																																										1
CTGGAG	1																																																																																																										1
CTGGCA	1																																																																																																										1
CTGGCT	1																																																																																																										1
CTGGGG	1																																																																																																										1
CTTCCT	1																																																																																																										1
CTTCTA	1																																																																																																										1
CTTGTT	1	1																																																																																																									2
CTTTTC	1																																																																																																										1
CTTTTT	4	1			1																																																																																																						6
GAAAAA	4																																																																																																										4
GAAAAG	1																																																																																																										1
GAAAAT	1																																																																																																										1
GAAGAC	2																																																																																																										2
GAAGAG	2																																																																																																										2
GAAGTG	1																																																																																																										1
GAATTA	1																																																																																																										1
GACAGC	1																																																																																																										1
GACGAA	1																																																																																																										1
GACGAG	1																																																																																																										1
GACGCA	1																																																																																																										1
GACTAC	1																																																																																																										1
GACTGC	1																																																																																																										1
GAGAAA	1																																																																																																										1
GAGCAC	1																																																																																																										1
GAGCAG	1																																																																																																										1
GAGCCA	1																																																																																																										1
GAGCCT	1																																																																																																										1
GAGGAA	2																																																																																																										2
GAGGAT	1	1																																																																																																									2
GAGGGA	2																																																																																																										2
GAGGTC	1																																																																																																										1
GAGTGG	1																																																																																																										1
GATATC	1																																																																																																										1
GATATG	1																																																																																																										1
GATCCC	1																																																																																																										1
GATGAG									1																																																																																																		1
GATGGT	1																																																																																																										1
GATGTT	1																																																																																																										1
GATTGT	1																																																																																																										1
GCAAAA		1																																																																																																									1
GCAACC	1																																																																																																										1
GCAATG	1																																																																																																										1
GCACAT	1																																																																																																										1
GCAGCC	1																																																																																																										1
GCAGTA	1																																																																																																										1
GCCACG	1																																																																																																										1
GCCGAT	1																																																																																																										1
GCCGCT		1																																																																																																									1
GCCTGA	1		1																																																																																																								2
GCCTGT		1																																																																																																									1
GCGATG	1																																																																																																										1
GCGATT	1																																																																																																										1
GCGCAG		1																																																																																																									1
GCGCTC	1																																																																																																										1
GCGGCA		1																																																																																																									1
GCGGCT		1																																																																																																									1
GCGTCA	1																																																																																																										1
GCTAGA			1																																																																																																								1
GCTCCT		1																																																																																																									1
GCTCTC	1																																																																																																										1
GCTGAC	1																																																																																																										1
GCTGCG	1																																																																																																										1
GCTGGA	1																																																																																																										1
GCTTCC	1																																																																																																										1
GCTTCG	1																																																																																																										1
GCTTCT	1																																																																																																										1
GCTTTT	1																																																																																																										1
GGAAAA	1																																																																																																										1
GGAAGA	1																																																																																																										1
GGACAG	1																																																																																																										1
GGACTT	1																																																																																																										1
GGAGAA	1																																																																																																										1
GGAGAG		1																																																																																																									1
GGAGGG	1																																																																																																										1
GGCACC		1																																																																																																									1
GGCGCC	1																																																																																																										1
GGCTCC	2																																																																																																										2
GGCTCG	1	1																																																																																																									2
GGCTCT	1																																																																																																										1
GGCTGC	3	1																																																																																																									4
GGCTGG		1																																																																																																									1
GGGAAA		1																																																																																																									1
GGGACC		1																																																																																																									1
GGGAGA	1																																																																																																										1
GGGATC	1																																																																																																										1
GGTCTT	1																																																																																																										1
GGTGCT	1																																																																																																										1
GGTGGC	1																																																																																																										1
GGTTAT	1																																																																																																										1
GGTTTG	1																																																																																																										1
GTACAT		1																																																																																																									1
GTAGCA	1																																																																																																										1
GTCACC	1																																																																																																										1
GTCATC							1																																																																																																				1
GTCCAT	1																																																																																																										1
GTGGCA	1																																																																																																										1
GTGGTT	1																																																																																																										1
GTGTAT	1																																																																																																										1
GTGTCT	1																																																																																																										1
GTGTGC	1																																																																																																										1
GTGTTG		1																																																																																																									1
GTTCCT	1																																																																																																										1
GTTCTT	1																																																																																																										1
GTTGAA	1																																																																																																										1
GTTGCA	1																																																																																																										1
GTTGGC			1																																																																																																								1
GTTGGG	1																																																																																																										1
GTTGTC	1																																																																																																										1
GTTTTG	1																																																																																																										1
TAAAAA	3		1																																																																																																								4
TAATAT	1																																																																																																										1
TAATTA	3																																																																																																										3
TAGTAA	1																																																																																																										1
TAGTGG	1																																																																																																										1
TATAAA	1																																																																																																										1
TATAAT	1																																																																																																										1
TATATG	2																																																																																																										2
TATCTT	1																																																																																																										1
TATGCA	1																																																																																																										1
TATTAA	1																																																																																																										1
TATTTC	1																																																																																																										1
TATTTT	8																																																																																																										8
TCACAT	1																																																																																																										1
TCACCA	1																																																																																																										1
TCAGCC	1																																																																																																										1
TCAGGA	1																																																																																																										1
TCAGGT	1																																																																																																										1
TCATCG	4																																																																																																										4
TCATTT	1																																																																																																										1
TCCAAT	1																																																																																																										1
TCCAGC	1																																																																																																										1
TCCCTC	1																																																																																																										1
TCCCTG	1																																																																																																										1
TCCTCA	2																																																																																																										2
TCCTCG	1																																																																																																										1
TCCTCT	1																																																																																																										1
TCGTCA	1																																																																																																										1
TCGTTG	1																																																																																																										1
TCTCGC	1																																																																																																										1
TCTGAG	1																																																																																																										1
TCTGGC	1																																																																																																										1
TCTGTT		1																																																																																																									1
TCTTCG	1																																																																																																										1
TCTTTA	1																																																																																																										1
TCTTTC			1																																																																																																								1
TCTTTG	1																																																																																																										1
TCTTTT	5																																																																																																										5
TGAAAC	1																																																																																																										1
TGAAGA		1																																																																																																									1
TGACAT	1																																																																																																										1
TGACGA	2																																																																																																										2
TGAGAA	1																																																																																																										1
TGATGC	1																																																																																																										1
TGATGT	2																																																																																																										2
TGATTA	1																																																																																																										1
TGCAGA	1																																																																																																										1
TGCCAC		1																																																																																																									1
TGCGGC	1																																																																																																										1
TGCTGG	1	1																																																																																																									2
TGCTGT	1	1																																																																																																									2
TGCTTC	2																																																																																																										2
TGCTTT	1																																																																																																										1
TGGAGC	1																																																																																																										1
TGGTAG	1																																																																																																										1
TGGTGA	1																																																																																																										1
TGGTTG	1																																																																																																										1
TGTATA	1																																																																																																										1
TGTCGT	1																																																																																																										1
TGTCTT	1																																																																																																										1
TGTGGT	1																																																																																																										1
TGTTGC	2																																																																																																										2
TGTTTT	1																																																																																																										1
TTAAAA	1																																																																																																										1
TTAATA	7																																																																																																										7
TTAATT	2																																																																																																										2
TTATAA		1																																																																																																									1
TTATTT	1																																																																																																										1
TTCCTC	1																																																																																																										1
TTCGGG	1																																																																																																										1
TTCTCA	1																																																																																																										1
TTCTCT	1																																																																																																										1
TTCTTA	1																																																																																																										1
TTCTTT	4	1																																																																																																									5
TTGAGG	1																																																																																																										1
TTGCCA	1																																																																																																										1
TTGTAG	1																																																																																																										1
TTGTTA	1																																																																																																										1
TTTAAT	1																																																																																																										1
TTTATT	4		2																																																																																																								6
TTTCAA	1																																																																																																										1
TTTCAC	1																																																																																																										1
TTTCCC	1																																																																																																										1
TTTCCT	1																																																																																																										1
TTTCTA	1																																																																																																										1
TTTCTC	1																																																																																																										1
TTTCTT	9																																																																																																										9
TTTGAT		1																																																																																																									1
TTTGGG		1																																																																																																									1
TTTGTT	1																																																																																																										1
TTTTAA	1																																																																																																										1
TTTTAC	1																																																																																																										1
TTTTAT	4	2	1																																																																																																								7
TTTTCA	1																																																																																																										1
TTTTCC	1																																																																																																										1
TTTTCT	10	2	1																																																																																																								13
TTTTGT		1																																																																																																									1
TTTTTA	9	2																																																																																																									11
TTTTTC	11																																																																																																										11

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	43	39	35	41	34	26	19	18	19	20	8	10	8	3	9	6	13	6	6	4	7	2	6	1	4	4	5		6	4	3	3	3	2	3	2		1	3	3	1	3			1			2				1	1		1									1					1							1													1	443
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	6	3	2	2	4		1				1				1				1					2			1				1					1	1			1																																																	32
AC/GT	-	-	-	39	17	4	3	4	4	3	3	3	2	2		2	1	2	1	2		1				1	1						1														4	1																																																											101
AG/CT	-	-	-	97	52	28	27	14	11	8	4	6	2	4	2		1	3		1	2	1			1	1																																																																																	265
AT/AT	-	-	-	182	53	27	32	14	8	6	4	3	1	2	1		1																																																																																										334
CG/CG	-	-	-	3			1																																																																																																				4
AAC/GTT	-	-	19	10	10	2	3	1		1	1	1																																																																																															48
AAG/CTT	-	-	57	30	11	6	6	3	2	3					1			1				1	1				1			1	4																																																																												128
AAT/ATT	-	-	70	35	11	6	2	4		5	2						1														3																																																																												139
ACC/GGT	-	-	21	6	4		2	2			1																																																																																																36
ACG/CGT	-	-	10	1		1		1			1																																																																																																14
ACT/AGT	-	-	14	5	3	2	1	1	2												1	1					1				1																																																																												32
AGC/CTG	-	-	27	13	4	4		3																																																																																																			51
AGG/CCT	-	-	12	5	5	2	4	1			1	1	1						1					1																																																																																			34
ATC/ATG	-	-	24	11	2	3	1	1	1	1				1							1			1																																																																																			47
CCG/CGG	-	-	20	3	1	2																																																																																																					26
AAAC/GTTT	-	3																																																																																																									3
AAAG/CTTT	-	52	28	19	3	1	3	3	1	1				1																																																																																													112
AAAT/ATTT	-	72	17	1	1	1	2	1																																																																																																			95
AACC/GGTT	-	1		1																																																																																																							2
AACT/AGTT	-	2			1																																																																																																						3
AAGC/CTTG	-	2																																																																																																									2
AAGG/CCTT	-	5																																																																																																									5
AAGT/ACTT	-	1																																																																																																									1
AATC/ATTG	-	16	5	4	2																																																																																																						27
AATG/ATTC	-	6	2	1																																																																																																							9
AATT/AATT	-	14			1	1																																																																																																					16
ACAG/CTGT	-			1		1																																																																																																					2
ACAT/ATGT	-	28	11	7	2	2	1	1																																																																																																			52
ACCG/CGGT	-	1																																																																																																									1
ACCT/AGGT	-	2			1		1																																																																																																				4
ACGC/CGTG	-						1																																																																																																				1
ACTC/AGTG	-	8	1																																																																																																								9
ACTG/AGTC	-	3																																																																																																									3
AGAT/ATCT	-	7	3		1																																																																																																						11
AGCC/CTGG	-	1																																																																																																									1
AGCG/CGCT	-	1																																																																																																									1
AGCT/AGCT	-	1																																																																																																									1
AGGG/CCCT	-	3																																																																																																									3
ATCC/ATGG	-	5	1																																																																																																								6
ATGC/ATGC	-	1																																																																																																									1
AAAAC/GTTTT	14	3	1																																																																																																								18
AAAAG/CTTTT	201	62	15	5	1																																																																																																						284
AAAAT/ATTTT	155	27	6	4		1			1									1																																																																																									195
AAACC/GGTTT	5																																																																																																										5
AAACG/CGTTT	2	1																																																																																																									3
AAACT/AGTTT	5																																																																																																										5
AAAGC/CTTTG	3	2																																																																																																									5
AAAGG/CCTTT	24																																																																																																										24
AAAGT/ACTTT	2																																																																																																										2
AAATC/ATTTG	7		1	1																																																																																																							9
AAATG/ATTTC	11	1	1																																																																																																								13
AAATT/AATTT	53	1	1																																																																																																								55
AACAC/GTGTT	3																																																																																																										3
AACAT/ATGTT	1																																																																																																										1
AACCC/GGGTT	9																																																																																																										9
AACCG/CGGTT	3																																																																																																										3
AACCT/AGGTT	3	1																																																																																																									4
AACGC/CGTTG	2																																																																																																										2
AACTC/AGTTG	2																																																																																																										2
AACTG/AGTTC	1																																																																																																										1
AAGAC/CTTGT	5	1																																																																																																									6
AAGAG/CTCTT	15	1	1																																																																																																								17
AAGAT/ATCTT	1																																																																																																										1
AAGCC/CTTGG	1																																																																																																										1
AAGCT/AGCTT	1																																																																																																										1
AAGGG/CCCTT	10	1																																																																																																									11
AAGTC/ACTTG	4																																																																																																										4
AAGTG/ACTTC	1																																																																																																										1
AATAC/ATTGT	4																																																																																																										4
AATAG/ATTCT	2	1																																																																																																									3
AATAT/ATATT	34																																																																																																										34
AATCC/ATTGG	8																																																																																																										8
AATCT/AGATT	3																																																																																																										3
AATGC/ATTGC	4	2																																																																																																									6
AATGG/ATTCC	2	1																																																																																																									3
AATGT/ACATT	2																																																																																																										2
AATTC/AATTG	5	1																																																																																																									6
ACACC/GGTGT	1																																																																																																										1
ACACG/CGTGT	2																																																																																																										2
ACACT/AGTGT	1	1																																																																																																									2
ACAGC/CTGTG	1																																																																																																										1
ACAGG/CCTGT	3																																																																																																										3
ACAGT/ACTGT	10																																																																																																										10
ACATC/ATGTG	5																																																																																																										5
ACATG/ATGTC	3	1																																																																																																									4
ACCAG/CTGGT	2																																																																																																										2
ACCAT/ATGGT	7																																																																																																										7
ACCCC/GGGGT	2																																																																																																										2
ACCCG/CGGGT	1																																																																																																										1
ACCCT/AGGGT	1	1																																																																																																									2
ACCGG/CCGGT	1																																																																																																										1
ACCGT/ACGGT	3																																																																																																										3
ACCTC/AGGTG	1																																																																																																										1
ACCTG/AGGTC	1																																																																																																										1
ACGAG/CGTCT	3	1																																																																																																									4
ACGAT/ATCGT	1																																																																																																										1
ACGCC/CGTGG	1																																																																																																										1
ACGGC/CCGTG	1																																																																																																										1
ACGGG/CCCGT	2		1																																																																																																								3
ACTAG/AGTCT	4	1																																																																																																									5
ACTAT/AGTAT	3																																																																																																										3
ACTCC/AGTGG	1																																																																																																										1
ACTCG/AGTCG		1																																																																																																									1
ACTCT/AGAGT	1																																																																																																										1
ACTGG/AGTCC		1																																																																																																									1
AGAGC/CTCTG	1																																																																																																										1
AGAGG/CCTCT	7		1																																																																																																								8
AGATC/ATCTG		2																																																																																																									2
AGATG/ATCTC	9	2	1	1																																																																																																							13
AGCAT/ATGCT	2																																																																																																										2
AGCCC/CTGGG	2																																																																																																										2
AGCCG/CGGCT	2																																																																																																										2
AGCGG/CCGCT	1																																																																																																										1
AGCTC/AGCTG	7																																																																																																										7
AGGAT/ATCCT	5																																																																																																										5
AGGCG/CCTCG	2	1																																																																																																									3
AGGGG/CCCCT	8	1																																																																																																									9
ATATC/ATATG	7																																																																																																										7
ATCCC/ATGGG	5	1																																																																																																									6
ATCGC/ATGCG	1																																																																																																										1
AAAAAC/GTTTTT	4	1																																																																																																									5
AAAAAG/CTTTTT	81	18	3	1	1																																																																																																						104
AAAAAT/ATTTTT	70	10	6			1																																																																																																					87
AAAACC/GGTTTT	2																																																																																																										2
AAAAGC/CTTTTG	3	1																																																																																																									4
AAAAGG/CCTTTT	7	1																																																																																																									8
AAAAGT/ACTTTT	2																																																																																																										2
AAAATC/ATTTTG		1	1																																																																																																								2
AAAATG/ATTTTC	7																																																																																																										7
AAAATT/AATTTT	9																																																																																																										9
AAACAC/GTGTTT	1																																																																																																										1
AAACAG/CTGTTT		1																																																																																																									1
AAACCC/GGGTTT	5	1																																																																																																									6
AAACGG/CCGTTT	1																																																																																																										1
AAACTG/AGTTTC	1																																																																																																										1
AAAGAC/CTTTGT	2																																																																																																										2
AAAGAG/CTCTTT	6	1	1																																																																																																								8
AAAGAT/ATCTTT	2																																																																																																										2
AAAGGG/CCCTTT	2	1	1																																																																																																								4
AAAGGT/ACCTTT	1																																																																																																										1
AAAGTC/ACTTTG	1																																																																																																										1
AAAGTG/ACTTTC	1																																																																																																										1
AAATAG/ATTTCT	2																																																																																																										2
AAATAT/ATATTT	2		1																																																																																																								3
AAATCC/ATTTGG	1																																																																																																										1
AAATCT/AGATTT	2																																																																																																										2
AAATGG/ATTTCC	1	1																																																																																																									2
AAATGT/ACATTT		1																																																																																																									1
AAATTG/AATTTC	1																																																																																																										1
AAATTT/AAATTT	2	1																																																																																																									3
AACAAG/CTTGTT	4	2																																																																																																									6
AACAAT/ATTGTT	1																																																																																																										1
AACACC/GGTGTT	2	1																																																																																																									3
AACAGC/CTGTTG	5	1	1																																																																																																								7
AACAGG/CCTGTT	3																																																																																																										3
AACATC/ATGTTG	3																																																																																																										3
AACATG/ATGTTC	1																																																																																																										1
AACCAC/GGTTGT	4																																																																																																										4
AACCAT/ATGGTT	1																																																																																																										1
AACCCC/GGGGTT	4																																																																																																										4
AACCCG/CGGGTT	2																																																																																																										2
AACCGC/CGGTTG	1																																																																																																										1
AACCTC/AGGTTG	1																																																																																																										1
AACCTG/AGGTTC	1																																																																																																										1
AACGAC/CGTTGT	3																																																																																																										3
AACGCC/CGTTGG			1																																																																																																								1
AACGTC/ACGTTG	1																																																																																																										1
AACTAC/AGTTGT	2																																																																																																										2
AACTAT/AGTTAT	1																																																																																																										1
AACTGC/AGTTGC	1																																																																																																										1
AACTTC/AAGTTG	1																																																																																																										1
AAGAAT/ATTCTT	1																																																																																																										1
AAGACC/CTTGGT	1																																																																																																										1
AAGACG/CGTCTT	4																																																																																																										4
AAGAGG/CCTCTT	9	1																																																																																																									10
AAGATG/ATCTTC		1																																																																																																									1
AAGCAG/CTGCTT	3																																																																																																										3
AAGCCG/CGGCTT	1		1																																																																																																								2
AAGCGG/CCGCTT	1																																																																																																										1
AAGGAC/CCTTGT	1																																																																																																										1
AAGGAG/CCTTCT	1																																																																																																										1
AAGGCG/CCTTCG	1																																																																																																										1
AAGGGC/CCCTTG	2																																																																																																										2
AAGTAG/ACTTCT	1	1																																																																																																									2
AAGTCC/ACTTGG	2																																																																																																										2
AAGTGG/ACTTCC	1																																																																																																										1
AATACC/ATTGGT	1																																																																																																										1
AATAGT/ACTATT	2																																																																																																										2
AATATT/AATATT	14																																																																																																										14
AATCAC/ATTGTG	2																																																																																																										2
AATCAT/ATGATT	4																																																																																																										4
AATCCC/ATTGGG		1	1																																																																																																								2
AATCGC/ATTGCG	1																																																																																																										1
AATGAG/ATTCTC	3																																																																																																										3
AATGCC/ATTGGC	2																																																																																																										2
AATGGC/ATTGCC	2																																																																																																										2
AATGGG/ATTCCC	1																																																																																																										1
AATGGT/ACCATT	1																																																																																																										1
AATGTC/ACATTG	1																																																																																																										1
AATGTG/ACATTC	2																																																																																																										2
AATTAC/AATTGT	1																																																																																																										1
AATTAG/AATTCT	1																																																																																																										1
AATTAT/AATTAT	9	1																																																																																																									10
AATTCC/AATTGG	1																																																																																																										1
ACACAG/CTGTGT	1																																																																																																										1
ACACAT/ATGTGT	2																																																																																																										2
ACACCC/GGGTGT		1																																																																																																									1
ACACGC/CGTGTG	1																																																																																																										1
ACAGAG/CTCTGT	1																																																																																																										1
ACAGCG/CGCTGT	1																																																																																																										1
ACAGGC/CCTGTG		1																																																																																																									1
ACAGGG/CCCTGT	2																																																																																																										2
ACAGTC/ACTGTG	1																																																																																																										1
ACATAG/ATGTCT	1																																																																																																										1
ACATAT/ATATGT	3																																																																																																										3
ACATCT/AGATGT	1																																																																																																										1
ACATGC/ATGTGC	1																																																																																																										1
ACATGG/ATGTCC	2																																																																																																										2
ACATGT/ACATGT	1	1																																																																																																									2
ACCACG/CGTGGT	1																																																																																																										1
ACCACT/AGTGGT	2							2																																																																																																			4
ACCAGC/CTGGTG	2	1																																																																																																									3
ACCATC/ATGGTG	4																																																																																																										4
ACCATG/ATGGTC	1																																																																																																										1
ACCCCC/GGGGGT	1																																																																																																										1
ACCCTC/AGGGTG		1																																																																																																									1
ACCCTG/AGGGTC	1																																																																																																										1
ACCGAG/CGGTCT	1																																																																																																										1
ACCGCC/CGGTGG	2																																																																																																										2
ACCGGC/CCGGTG		1																																																																																																									1
ACCGGG/CCCGGT		1																																																																																																									1
ACCGTC/ACGGTG	1																																																																																																										1
ACCTAT/AGGTAT	1																																																																																																										1
ACCTCC/AGGTGG		1																																																																																																									1
ACCTCG/AGGTCG	1																																																																																																										1
ACCTGC/AGGTGC	1																																																																																																										1
ACGACT/AGTCGT	1																																																																																																										1
ACGAGC/CGTGCT	1																																																																																																										1
ACGAGG/CCTCGT	5																																																																																																										5
ACGATC/ATCGTG	2																																																																																																										2
ACGATG/ATCGTC	9						1																																																																																																				10
ACGCAG/CGTCTG	1																																																																																																										1
ACGCGG/CCGCGT	1																																																																																																										1
ACGCTC/AGCGTG	2																																																																																																										2
ACGCTG/AGCGTC	2																																																																																																										2
ACGGAG/CCGTCT	1																																																																																																										1
ACGGCC/CCGTGG	3																																																																																																										3
ACGTAG/ACGTCT		1																																																																																																									1
ACTATG/AGTCAT	1																																																																																																										1
ACTCAG/AGTCTG	1																																																																																																										1
ACTCAT/AGTATG	1																																																																																																										1
ACTCCC/AGTGGG	1																																																																																																										1
ACTCCG/AGTCGG	1																																																																																																										1
ACTCGC/AGTGCG	1																																																																																																										1
ACTCTC/AGAGTG	1																																																																																																										1
ACTGAT/AGTATC	1																																																																																																										1
ACTGCC/AGTGGC	2	1																																																																																																									3
ACTGCG/AGTCGC	2																																																																																																										2
ACTGCT/AGCAGT	3																																																																																																										3
ACTGGC/AGTGCC	1																																																																																																										1
AGAGCC/CTCTGG	4																																																																																																										4
AGAGCG/CGCTCT	2																																																																																																										2
AGAGCT/AGCTCT	1		1																																																																																																								2
AGAGGC/CCTCTG	1																																																																																																										1
AGAGGG/CCCTCT	6	1	1																																																																																																								8
AGATCG/ATCTCG	1																																																																																																										1
AGATGC/ATCTGC	1																																																																																																										1
AGCAGG/CCTGCT	2	1																																																																																																									3
AGCATC/ATGCTG	3																																																																																																										3
AGCCAT/ATGGCT	1																																																																																																										1
AGCCCC/CTGGGG	1	1																																																																																																									2
AGCCCG/CGGGCT	1	1																																																																																																									2
AGCCGC/CGGCTG	6	2																																																																																																									8
AGCCGG/CCGGCT	4																																																																																																										4
AGCCTC/AGGCTG	1																																																																																																										1
AGCCTG/AGGCTC	4		1																																																																																																								5
AGCGAT/ATCGCT		1																																																																																																									1
AGCGCG/CGCGCT	1																																																																																																										1
AGCGGC/CCGCTG		2																																																																																																									2
AGCGGG/CCCGCT	1																																																																																																										1
AGCTCC/AGCTGG	5																																																																																																										5
AGCTGC/AGCTGC	1																																																																																																										1
AGGATC/ATCCTG	1																																																																																																										1
AGGATG/ATCCTC	8	1							1																																																																																																		10
AGGCGC/CCTGCG	1	1																																																																																																									2
AGGCGG/CCGCCT	3																																																																																																										3
AGGGAT/ATCCCT	1																																																																																																										1
AGGGGG/CCCCCT	2																																																																																																										2
ATATCC/ATATGG	1																																																																																																										1
ATATCG/ATATCG	1																																																																																																										1
ATATGC/ATATGC	1																																																																																																										1
ATCCCC/ATGGGG	1																																																																																																										1
ATCCCG/ATCGGG	2																																																																																																										2
ATCGCC/ATGGCG	2																																																																																																										2
ATCGGC/ATGCCG	2																																																																																																										2
CCCGCG/CGCGGG	1																																																																																																										1
CCGGCG/CCGGCG	1																																																																																																										1
