Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-5/megassr/results/hub_GCA_039267225.1/fasta/hub_GCA_039267225.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              399
Total size of examined sequences (bp):           37179152
Total number of identified SSRs:                 3368
Number of SSR containing sequences:              66
Number of sequences containing more than 1 SSR:  45
Number of SSRs present in compound formation:    300


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	490
2	626
3	531
4	340
5	813
6	568

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	21	17	15	13	12	19	9	13	9	4	8	4	2	2	2	5	5	3	1	4	3	3	6	3		1	1	3	1	5	3	2				1	1		1	2				2		1												1	1																			230
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	2	4	2		1	2	1													2														1		1																																										20
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	6	5	3		1	3	1						1					1			1				1									1																												2																	26
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	18	17	19	21	15	6	5	8	9	4	5	2	5	6	4	2	4	1	4	3	3	5	4	2	1	1	1	2			2	1			2		2				1		1	1			1		1				2																								2	214
AC	-	-	-	10	2	2		1	1	1	1		2							1																											2																																																	23
AG	-	-	-	28	15	13	8	6	4	3	1	3	1	4				1		1		1																																																																										89
AT	-	-	-	62	20	13	19	9	4	4	1	1		1																																																																																		134
CA	-	-	-	14	3	2				1				1		1		1		1																																																																												24
CT	-	-	-	20	7	3	5	1	4	1	1	1	1		1						1				1	1																																																																						48
GA	-	-	-	22	13	7	4	1	1	2							1																																																																															51
GC	-	-	-	3			1																																																																																									4
GT	-	-	-	9	5	1	1	2	1	1	1	1				1						1				1							1														1	1																																																28
TA	-	-	-	70	18	9	8	3	3	1	2	1	1		1		1																																																																															118
TC	-	-	-	29	18	5	9	8	2	1	2	2			1		1	1			1																																																																											80
TG	-	-	-	6	5	1	2	2	2		1	1	1	1			1	1	1									1																			1																																																	27
AAC	-	-	1	1	1	1																																																																																										4
AAG	-	-	13	7	4	1	1	1	2																		1				2																																																																	32
AAT	-	-	13	3	2	2		1		3	1																																																																																					25
ACA	-	-	1		4																																																																																											5
ACC	-	-	2	1	1																																																																																											4
ACG	-	-	1			1																																																																																										2
ACT	-	-	2	1	1																						1				1																																																																	6
AGA	-	-	6	2	1			1		1																					1																																																																	12
AGC	-	-		6	1	1																																																																																										8
AGG	-	-					1						1																																																																																			2
AGT	-	-	1																																																																																													1
ATA	-	-	7	5							1																				1																																																																	14
ATC	-	-	1	3							1																																																																																					5
ATG	-	-	4	2																																																																																												6
ATT	-	-	5	5	2	1				1																					1																																																																	15
CAA	-	-	4	3	1	1																																																																																										9
CAC	-	-	5	2	1		1																																																																																									9
CAG	-	-	1	2				1																																																																																								4
CAT	-	-	3	2	1	2																																																																																										8
CCA	-	-	5		1			1																																																																																								7
CCG	-	-	2		1																																																																																											3
CCT	-	-	1	1	2																																																																																											4
CGA	-	-	4	1																																																																																												5
CGC	-	-	2			1																																																																																										3
CGG	-	-	2																																																																																													2
CGT	-	-	1																																																																																													1
CTA	-	-	3	1		1															1																																																																											6
CTC	-	-	4	3		2	1	1			1																																																																																					12
CTG	-	-	10	1	1	2																																																																																										14
CTT	-	-	16	6	2	1	3			1					1																																																																																	30
GAA	-	-	7	4	2		2	1		1																				1																																																																		18
GAC	-	-	1																																																																																													1
GAG	-	-	2			1						1							1																																																																													5
GAT	-	-	5	1				1	1					1							1																																																																											10
GCA	-	-	7	1		1		1																																																																																								10
GCC	-	-	7	3																																																																																												10
GCG	-	-	2			1																																																																																										3
GCT	-	-	2	2																																																																																												4
GGA	-	-			1																																																																																											1
GGC	-	-	5																																																																																													5
GGT	-	-	2	1	1		1																																																																																									5
GTA	-	-	3	1			1																																																																																									5
GTC	-	-	2																																																																																													2
GTG	-	-	6		1						1																																																																																					8
GTT	-	-	3	3	2		2				1																																																																																					11
TAA	-	-	7	4	1		1																																																																																									13
TAC	-	-	2		1																	1																																																																										4
TAG	-	-	3	2	1	1		1	2																																																																																							10
TAT	-	-	11	6	1	1		1																							1																																																																	21
TCA	-	-	8	2	1	1	2																	1																																																																								15
TCC	-	-	5	2	2		1																						1																																																																			11
TCG	-	-	1					1			1																																																																																					3
TCT	-	-	8	3	2	1																1																																																																										15
TGA	-	-	3	2						1																																																																																						6
TGC	-	-	7	3	2			1																																																																																								13
TGG	-	-	2	2				1																																																																																								5
TGT	-	-	7	2	3		1	1																																																																																								14
TTA	-	-	5	4	3	1		1																							1																																																																	15
TTC	-	-	8	8		3												1					1								1																																																																	22
TTG	-	-	4	2						1		1																																																																																				8
AAAC	-	2																																																																																														2
AAAG	-	17	8	4			2	1																																																																																								32
AAAT	-	12	5			1																																																																																										18
AAGA	-	2	4	1				1																																																																																								8
AAGG	-	1																																																																																														1
AATA	-	3			1																																																																																											4
AATC	-	5	1		1																																																																																											7
AATG	-	1																																																																																														1
AATT	-	6			1	1																																																																																										8
ACAG	-					1																																																																																										1
ACAT	-	2	1	1	1	1																																																																																										6
ACCA	-	1																																																																																														1
ACCG	-	1																																																																																														1
AGAA	-	4	1	4																																																																																												9
AGAT	-		1																																																																																													1
AGCT	-	1																																																																																														1
AGTC	-	1																																																																																														1
AGTG	-	2	1																																																																																													3
ATAA	-	4		1																																																																																												5
ATAC	-	3																																																																																														3
ATAG	-	2	1		1																																																																																											4
ATCA	-	2	2	1																																																																																												5
ATCC	-	1																																																																																														1
ATCT	-	1																																																																																														1
ATGG	-	1																																																																																														1
ATGT	-	3	1	1																																																																																												5
ATTA	-	1																																																																																														1
ATTC	-	1	1																																																																																													2
ATTG	-	1																																																																																														1
ATTT	-	5	2																																																																																													7
CAAC	-			1																																																																																												1
CAAG	-	1																																																																																														1
CAAT	-		1																																																																																													1
CACG	-						1																																																																																									1
CAGT	-	1																																																																																														1
CATA	-	2	1																																																																																													3
CATC	-	1																																																																																														1
CCCT	-	1																																																																																														1
CCTA	-						1																																																																																									1
CGCT	-	1																																																																																														1
CTAC	-				1																																																																																											1
CTAT	-	1																																																																																														1
CTCA	-	1																																																																																														1
CTGA	-		1																																																																																													1
CTTC	-	1																																																																																														1
CTTT	-	2	4	2			1			1				1																																																																																		11
GAAA	-	5	2	2																																																																																												9
GAAG	-	1																																																																																														1
GAAT	-		1																																																																																													1
GAGG	-	1																																																																																														1
GAGT	-			1																																																																																												1
GATA	-	1																																																																																														1
GATG	-	2																																																																																														2
GATT	-	2																																																																																														2
GCCA	-	1																																																																																														1
GGAG	-	1																																																																																														1
GGAT	-				1																																																																																											1
GTAG	-	2																																																																																														2
GTAT	-	4	3																																																																																													7
GTCA	-	1																																																																																														1
GTGA	-	2																																																																																														2
GTTA	-				1																																																																																											1
TAAA	-	5																																																																																														5
TAAC	-	1																																																																																														1
TACA	-	8	1																																																																																													9
TACT	-	1																																																																																														1
TAGA	-	1																																																																																														1
TAGT	-	1																																																																																														1
TATG	-	2		1	1	1		1																																																																																								6
TATT	-	1																																																																																														1
TCAA	-	1																																																																																														1
TCAC	-	2																																																																																														2
TCAT	-	2		1																																																																																												3
TCCA	-		1																																																																																													1
TCCT	-	1																																																																																														1
TCTA	-	1	1																																																																																													2
TCTG	-			1																																																																																												1
TCTT	-	7	1	2	1																																																																																											11
TGAA	-	1																																																																																														1
TGAG	-	1																																																																																														1
TGAT	-	2	1																																																																																													3
TGCA	-	1																																																																																														1
TGTA	-	4	4	4			1																																																																																									13
TTAT	-	3	1																																																																																													4
TTCA	-	1																																																																																														1
TTCC	-	1																																																																																														1
TTCT	-	5	2																																																																																													7
TTGA	-	2		5	1																																																																																											8
TTGC	-	1																																																																																														1
TTGT	-	1																																																																																														1
TTTA	-	13	6				2	1																																																																																								22
TTTC	-	11	6	3	3	1		1	1																																																																																							26
AAAAC	2																																																																																															2
AAAAG	47	15	5	2	1																																																																																											70
AAAAT	31	10		2		1																																																																																										44
AAACA		1																																																																																														1
AAACC	1																																																																																															1
AAAGA	20	4																																																																																														24
AAAGG	3																																																																																															3
AAAGT	1																																																																																															1
AAATA	7	1																																																																																														8
AAATC				1																																																																																												1
AAATG	2	1																																																																																														3
AAATT	3																																																																																															3
AACAA	2																																																																																															2
AACTA	1																																																																																															1
AAGAA	12	6	1																																																																																													19
AAGAC	2																																																																																															2
AAGAG			1																																																																																													1
AAGGA	2																																																																																															2
AAGGG	1																																																																																															1
AAGTA	1																																																																																															1
AAGTC	2																																																																																															2
AATAA	9	1																																																																																														10
AATAC	1																																																																																															1
AATAT	5																																																																																															5
AATCC	2																																																																																															2
AATGA	1																																																																																															1
AATTC	1																																																																																															1
ACAAA	1																																																																																															1
ACACG	1																																																																																															1
ACAGC	1																																																																																															1
ACAGG	1																																																																																															1
ACCAA	1																																																																																															1
ACCAG	1																																																																																															1
ACCCA	1																																																																																															1
ACCCT		1																																																																																														1
ACCGT	1																																																																																															1
ACCTA	1																																																																																															1
ACGAA	1																																																																																															1
ACTAG	2																																																																																															2
ACTGG		1																																																																																														1
AGAAA	12	4																																																																																														16
AGAAG	3	1																																																																																														4
AGACA	1																																																																																															1
AGACT	1																																																																																															1
AGAGC	1																																																																																															1
AGAGG	1																																																																																															1
AGATG				1																																																																																												1
AGCAA		1																																																																																														1
AGCCC	1																																																																																															1
AGCTG	1																																																																																															1
AGGAA	2																																																																																															2
AGGAT	1																																																																																															1
AGGCG	1																																																																																															1
AGGGA	1																																																																																															1
AGGGG	1																																																																																															1
AGGTG	1																																																																																															1
AGTAC	2																																																																																															2
AGTAG	1																																																																																															1
ATAAA	7	1	1																																																																																													9
ATACC	2																																																																																															2
ATACT	1																																																																																															1
ATAGA		1																																																																																														1
ATAGG	1																																																																																															1
ATAGT	1																																																																																															1
ATATA	1																																																																																															1
ATATC	1																																																																																															1
ATATG	1																																																																																															1
ATATT	4																																																																																															4
ATCAC	2																																																																																															2
ATCAT	1																																																																																															1
ATCCA	2																																																																																															2
ATCCC	1																																																																																															1
ATCTA	1																																																																																															1
ATCTC			1																																																																																													1
ATGAT	3																																																																																															3
ATGCA	2																																																																																															2
ATGGG	1	1																																																																																														2
ATGTC	1																																																																																															1
ATGTG	1																																																																																															1
ATTAA	6																																																																																															6
ATTAT	3																																																																																															3
ATTCA	1																																																																																															1
ATTTA	1																																																																																															1
ATTTC	2																																																																																															2
ATTTG	2																																																																																															2
ATTTT	9	3	1																																																																																													13
CAAAG	2																																																																																															2
CAAAT	1																																																																																															1
CAACA	1																																																																																															1
CAAGA		1																																																																																														1
CAAGT	1																																																																																															1
CAATA	1																																																																																															1
CAATG	1																																																																																															1
CAATT	1																																																																																															1
CACCC	1																																																																																															1
CACTT	1																																																																																															1
CAGAT		1																																																																																														1
CAGCC	1																																																																																															1
CAGTA	1																																																																																															1
CATAC	2																																																																																															2
CATCT	2																																																																																															2
CATGT	2																																																																																															2
CATTC	1																																																																																															1
CATTT	2																																																																																															2
CCAAA	1																																																																																															1
CCAAC	2																																																																																															2
CCACC	1																																																																																															1
CCACG	1																																																																																															1
CCATT	1	1																																																																																														2
CCCGA	1																																																																																															1
CCCTC	1																																																																																															1
CCCTT	2																																																																																															2
CCGGT	1																																																																																															1
CCGTA	1																																																																																															1
CCGTG	1																																																																																															1
CCTCC	1																																																																																															1
CCTCT	1																																																																																															1
CCTTC	1																																																																																															1
CCTTT	3																																																																																															3
CGACA	1																																																																																															1
CGACT		1																																																																																														1
CGAGA	1																																																																																															1
CGAGG		1																																																																																														1
CGGCT	1																																																																																															1
CGTCT	1																																																																																															1
CGTTC	1																																																																																															1
CGTTT	1																																																																																															1
CTACA		1																																																																																														1
CTAGT		1																																																																																														1
CTATC	1																																																																																															1
CTATG	1																																																																																															1
CTCAG	1																																																																																															1
CTCAT	2																																																																																															2
CTCCG	1																																																																																															1
CTCTC			1																																																																																													1
CTCTT	2																																																																																															2
CTGAA	1																																																																																															1
CTGTA	1																																																																																															1
CTTCC	1	1																																																																																														2
CTTCT	1																																																																																															1
CTTTG		1																																																																																														1
CTTTT	16	4	1	1																																																																																												22
GAAAA	16	3	1																																																																																													20
GAAAG	1																																																																																															1
GAACC	1																																																																																															1
GAATT	2																																																																																															2
GACAA	1																																																																																															1
GACTA	1																																																																																															1
GAGAA	2																																																																																															2
GAGAC	1	1																																																																																														2
GAGAG	1																																																																																															1
GAGAT	3	1																																																																																														4
GAGCC	1																																																																																															1
GAGGC	1																																																																																															1
GAGGG	3	1																																																																																														4
GATTG	2																																																																																															2
GCAAA	1																																																																																															1
GCAAC	1																																																																																															1
GCATC	1																																																																																															1
GCTCA	1																																																																																															1
GCTGA	2																																																																																															2
GGAAA	3																																																																																															3
GGACA	1																																																																																															1
GGAGA	1																																																																																															1
GGATA	1																																																																																															1
GGATG	1																																																																																															1
GGATT	1																																																																																															1
GGGAA	1																																																																																															1
GGGAC	1																																																																																															1
GGGAG	1																																																																																															1
GGGAT	2																																																																																															2
GGGGA	1																																																																																															1
GGTAG	1																																																																																															1
GGTGT	1																																																																																															1
GGTTA		1																																																																																														1
GGTTC	1																																																																																															1
GGTTT	1																																																																																															1
GTACA	1																																																																																															1
GTATT	1																																																																																															1
GTCAT		1																																																																																														1
GTCCC			1																																																																																													1
GTCTG	1																																																																																															1
GTGTT	1																																																																																															1
GTTGG	2																																																																																															2
GTTGT	1																																																																																															1
GTTTA	1																																																																																															1
GTTTT	2																																																																																															2
TAAAA	9	2	1	1													1																																																																															14
TAAAT	1																																																																																															1
TAACC	2																																																																																															2
TAATA	1																																																																																															1
TAATG	1																																																																																															1
TAATT	3																																																																																															3
TACAA	1																																																																																															1
TACAC	1																																																																																															1
TACAG	1																																																																																															1
TACAT	1																																																																																															1
TACCA	1																																																																																															1
TACGG	1																																																																																															1
TAGAT	2																																																																																															2
TAGCT	1																																																																																															1
TAGTT	1																																																																																															1
TATAA	3																																																																																															3
TATAC	1																																																																																															1
TATAT	3																																																																																															3
TATCA	1																																																																																															1
TATCG	1																																																																																															1
TATGG	2																																																																																															2
TATTA	1																																																																																															1
TATTT	8	1	1																																																																																													10
TCAAC	1																																																																																															1
TCAGG	1																																																																																															1
TCATC	1	1																																																																																														2
TCATT			1																																																																																													1
TCCTA	1																																																																																															1
TCCTC	1																																																																																															1
TCCTG	1																																																																																															1
TCGGT	1																																																																																															1
TCGTT		1																																																																																														1
TCTAT	1																																																																																															1
TCTCC	2																																																																																															2
TCTCT	4																																																																																															4
TCTTA	1																																																																																															1
TCTTC	2																																																																																															2
TCTTT	8	1	1																																																																																													10
TGAGA	1																																																																																															1
TGAGC	2																																																																																															2
TGATA	1																																																																																															1
TGATC		1																																																																																														1
TGATG	1																																																																																															1
TGATT	2		1																																																																																													3
TGCAT	1	1																																																																																														2
TGCTA	1																																																																																															1
TGGAG	1																																																																																															1
TGGCT	1																																																																																															1
TGGGT	2																																																																																															2
TGTAC	4																																																																																															4
TGTGA	1																																																																																															1
TGTTA	1																																																																																															1
TGTTT	3		1																																																																																													4
TTAAA	2																																																																																															2
TTAAT	5																																																																																															5
TTAGT	1																																																																																															1
TTATA	2																																																																																															2
TTATT	7	4																																																																																														11
TTCAT	2																																																																																															2
TTCCC	3																																																																																															3
TTCCT	2																																																																																															2
TTCTC	1																																																																																															1
TTCTT	13	7	1																																																																																													21
TTGAA		1																																																																																														1
TTGAC	1																																																																																															1
TTGAG	1																																																																																															1
TTGAT		1																																																																																														1
TTGCA		1																																																																																														1
TTGCG	1																																																																																															1
TTGGA	1																																																																																															1
TTGGG	2																																																																																															2
TTGGT	1																																																																																															1
TTGTC	1																																																																																															1
TTTAA	4																																																																																															4
TTTAG	1																																																																																															1
TTTAT	7	2																																																																																														9
TTTCA	2																																																																																															2
TTTCC	8																																																																																															8
TTTCT	12	4																																																																																														16
TTTGA	2																																																																																															2
TTTGT	1																																																																																															1
TTTTA	20	3	2	1					1																																																																																							27
TTTTC	45	15	4	2																																																																																												66
TTTTG	3	2																																																																																														5
AAAAAC	1																																																																																															1
AAAAAG	18	5		1																																																																																												24
AAAAAT	15	5																																																																																														20
AAAACA	2	1																																																																																														3
AAAAGA	8	1																																																																																														9
AAAAGG	1																																																																																															1
AAAAGT	1																																																																																															1
AAAATA	10		1			1																																																																																										12
AAAATG	2																																																																																															2
AAAATT	1																																																																																															1
AAACCA	1																																																																																															1
AAACCC	1																																																																																															1
AAAGAA	7	1																																																																																														8
AAAGAC	1																																																																																															1
AAAGAG	1	1																																																																																														2
AAAGCA	1																																																																																															1
AAAGGA	1																																																																																															1
AAAGGG			1																																																																																													1
AAATAA	2		1																																																																																													3
AAATAT			1																																																																																													1
AACACA	1																																																																																															1
AACACC		1																																																																																														1
AACAGG	1																																																																																															1
AACCAC	1																																																																																															1
AACCCA		1																																																																																														1
AACCCC	1																																																																																															1
AACCTC	1																																																																																															1
AACCTG	1																																																																																															1
AACGCC			1																																																																																													1
AAGAAA	3			1																																																																																												4
AAGAAC	1																																																																																															1
AAGAGG		1																																																																																														1
AAGCCG			1																																																																																													1
AAGGGA	1																																																																																															1
AATAAA	1																																																																																															1
AATAAC	1																																																																																															1
AATACC	1																																																																																															1
AATGTA		1																																																																																														1
AATTAT	1																																																																																															1
ACAACC	1																																																																																															1
ACAAGA		1																																																																																														1
ACAATT	1																																																																																															1
ACAGCA	1																																																																																															1
ACCACT	1																																																																																															1
ACCATC	1																																																																																															1
ACCCAA	2																																																																																															2
ACCGCC	1																																																																																															1
ACGACC	1																																																																																															1
ACGATG	1																																																																																															1
ACGCTC	1																																																																																															1
ACGTCA	1																																																																																															1
ACTTTG	1																																																																																															1
AGAAAA	3	1																																																																																														4
AGAACA		1																																																																																														1
AGACAA	1																																																																																															1
AGACAC	1																																																																																															1
AGACGG	1																																																																																															1
AGACGT		1																																																																																														1
AGAGCG	1																																																																																															1
AGAGGG	1																																																																																															1
AGATCG	1																																																																																															1
AGCCCC	1																																																																																															1
AGCCGC	1	1																																																																																														2
AGCGGG	1																																																																																															1
AGCTCC	1																																																																																															1
AGCTCT	1																																																																																															1
AGCTGC	1																																																																																															1
AGGAAA	1																																																																																															1
AGGAAC	1																																																																																															1
AGGCGA	1																																																																																															1
AGGCGG	1																																																																																															1
AGGGTC	1																																																																																															1
AGGTGC	1																																																																																															1
AGTAGA	1																																																																																															1
AGTAGC	1																																																																																															1
AGTCCA	1																																																																																															1
AGTGAG	1																																																																																															1
AGTTTC	1																																																																																															1
ATAAAA	2																																																																																															2
ATAAAG	1																																																																																															1
ATAATC	2																																																																																															2
ATAATT	1																																																																																															1
ATACAT	1																																																																																															1
ATAGTC	1																																																																																															1
ATATAC	2																																																																																															2
ATCAAA		1																																																																																														1
ATCACA	1																																																																																															1
ATCATA	1																																																																																															1
ATCCAT	1																																																																																															1
ATCCCA			1																																																																																													1
ATCCCC	1																																																																																															1
ATCCTC	2																																																																																															2
ATGAAC	1																																																																																															1
ATGACC	1																																																																																															1
ATGACG	2																																																																																															2
ATGAGA	1																																																																																															1
ATGCCA	2																																																																																															2
ATGGTA	1																																																																																															1
ATGTAC	1																																																																																															1
ATGTAG	1																																																																																															1
ATTAAT	3																																																																																															3
ATTCTC	1																																																																																															1
ATTTAA	1																																																																																															1
ATTTAT	1																																																																																															1
ATTTTC	1																																																																																															1
ATTTTT	3																																																																																															3
CAAAAG	1																																																																																															1
CAACAG	1		1																																																																																													2
CAACAT	1																																																																																															1
CACACC		1																																																																																														1
CACCAG		1																																																																																														1
CACGGC	1																																																																																															1
CACTGC	1																																																																																															1
CAGCTC	2																																																																																															2
CAGGAA	1																																																																																															1
CAGGCT	1																																																																																															1
CAGTCA	1																																																																																															1
CATAAT	1																																																																																															1
CATACT	1																																																																																															1
CATCAC	1																																																																																															1
CATCAG	1																																																																																															1
CATCCT		1																																																																																														1
CATGTG	1																																																																																															1
CATTTC	1																																																																																															1
CCACAA	2																																																																																															2
CCACCT		1																																																																																														1
CCACTG	1																																																																																															1
CCACTT	1																																																																																															1
CCAGTG	1																																																																																															1
CCATGT	1																																																																																															1
CCCAAT		1																																																																																														1
CCCACT	1																																																																																															1
CCCCAA	1																																																																																															1
CCCCAC	1																																																																																															1
CCCCCT	2																																																																																															2
CCCTCT	1																																																																																															1
CCGAAC	1																																																																																															1
CCGAGA	1																																																																																															1
CCGATG	1																																																																																															1
CCGTGG	2																																																																																															2
CCTCAC		1																																																																																														1
CCTCCG	1																																																																																															1
CCTCTC	1	1																																																																																														2
CCTCTG	1																																																																																															1
CCTGCG		1																																																																																														1
CCTTGC	1																																																																																															1
CCTTTC	1																																																																																															1
CGATCA	1																																																																																															1
CGATCC	1																																																																																															1
CGCACT	1																																																																																															1
CGCAGC	1	1																																																																																														2
CGCCTC	1																																																																																															1
CGCTCA	1																																																																																															1
CGGAGC	1																																																																																															1
CGGCGC	1																																																																																															1
CGGCTC	1																																																																																															1
CTATCG		1																																																																																														1
CTCAGA	1																																																																																															1
CTCATC	2																																																																																															2
CTCGCT	1																																																																																															1
CTGATA	1																																																																																															1
CTGATG	1																																																																																															1
CTGCTA	1																																																																																															1
CTGCTC	2																																																																																															2
CTGGAG	1																																																																																															1
CTGGCT	1																																																																																															1
CTGTTG	1																																																																																															1
CTTCGT	1																																																																																															1
CTTCTC	1																																																																																															1
CTTGTT	1																																																																																															1
CTTTCT	1																																																																																															1
CTTTTC	1																																																																																															1
CTTTTT	4	2																																																																																														6
GAAAAA	5																																																																																															5
GAAAAG	1																																																																																															1
GAAAAT	1																																																																																															1
GAAGAG	5																																																																																															5
GAATGG	1																																																																																															1
GAATTA	1																																																																																															1
GAATTG	1																																																																																															1
GACAAC	2																																																																																															2
GACAGC	1																																																																																															1
GACAGG	1																																																																																															1
GACATG	1																																																																																															1
GACGAG	2																																																																																															2
GAGAAA	1																																																																																															1
GAGCCA	1																																																																																															1
GAGCCT	1																																																																																															1
GAGCGC	1																																																																																															1
GAGGAA	2																																																																																															2
GAGGAC	1																																																																																															1
GAGGAT	2																																																																																															2
GAGGGA	1		1																																																																																													2
GAGGTC	1																																																																																															1
GAGTCG	1																																																																																															1
GATAGG	1																																																																																															1
GATATC	1																																																																																															1
GATCCC	1																																																																																															1
GATGAC	1																																																																																															1
GATGGC	1																																																																																															1
GATTGT	1																																																																																															1
GCAGAA	1																																																																																															1
GCAGGA		1																																																																																														1
GCAGTA	1																																																																																															1
GCATCA	1																																																																																															1
GCATCG	1																																																																																															1
GCCATT	1																																																																																															1
GCCGCT		1																																																																																														1
GCCTGA	1		1																																																																																													2
GCCTGT		1																																																																																														1
GCGATG	1																																																																																															1
GCGCCT	1																																																																																															1
GCGCGG	1																																																																																															1
GCGGCA		1																																																																																														1
GCGTCA	1																																																																																															1
GCTAGA			1																																																																																													1
GCTCAG	1																																																																																															1
GCTCTC	1																																																																																															1
GCTGAC	1																																																																																															1
GCTGCG	1																																																																																															1
GCTTCC	1																																																																																															1
GCTTCG	1																																																																																															1
GCTTTT	1																																																																																															1
GGAAAA	1																																																																																															1
GGAAAT		1																																																																																														1
GGAACA	1																																																																																															1
GGACAG	1																																																																																															1
GGACGC	1																																																																																															1
GGAGAG	2																																																																																															2
GGAGCC	1																																																																																															1
GGATTT	1																																																																																															1
GGCAAT	1																																																																																															1
GGCACC		1																																																																																														1
GGCTCC	1																																																																																															1
GGCTCG	1	1																																																																																														2
GGCTCT	1																																																																																															1
GGCTGC	2																																																																																															2
GGCTGG		1																																																																																														1
GGGACC		1																																																																																														1
GGGTTG	1																																																																																															1
GGTCTT	1																																																																																															1
GGTGCT	1																																																																																															1
GGTGGC	1																																																																																															1
GGTTAT	1																																																																																															1
GTACAT		1																																																																																														1
GTAGTC	1																																																																																															1
GTAGTG								1																																																																																								1
GTATAG	1																																																																																															1
GTCACC	1																																																																																															1
GTCATC							1																																																																																									1
GTCGCA	1																																																																																															1
GTGCTC	1																																																																																															1
GTGTAT	1																																																																																															1
GTGTGC	1																																																																																															1
GTTGCA	1																																																																																															1
GTTGGT	1																																																																																															1
TAAAAA	3		1																																																																																													4
TAAGAA	1																																																																																															1
TACTAT	1																																																																																															1
TAGAAA	1																																																																																															1
TAGACA	1																																																																																															1
TAGTGG	1																																																																																															1
TATAAT	1																																																																																															1
TATAGT	1																																																																																															1
TATATT	1																																																																																															1
TATGCA	1																																																																																															1
TATTTC	1																																																																																															1
TATTTT	5		1																																																																																													6
TCAATG	1																																																																																															1
TCACGA	1																																																																																															1
TCAGGA	1																																																																																															1
TCATCC									1																																																																																							1
TCATCG	3																																																																																															3
TCCAAG	1																																																																																															1
TCCTCA	1																																																																																															1
TCCTCG	1																																																																																															1
TCCTTT		1																																																																																														1
TCGCAA	1																																																																																															1
TCGCAG	1																																																																																															1
TCGTCA	3																																																																																															3
TCGTCC	1																																																																																															1
TCGTCT	2																																																																																															2
TCTACT		1																																																																																														1
TCTGCG	1																																																																																															1
TCTGGC	1																																																																																															1
TCTGTC	1																																																																																															1
TCTGTT		1																																																																																														1
TCTTCA		1																																																																																														1
TCTTCC	2																																																																																															2
TCTTCG	1																																																																																															1
TCTTGT	1																																																																																															1
TCTTTA	1																																																																																															1
TCTTTC			1																																																																																													1
TCTTTT	4	1	1																																																																																													6
TGAATG	2																																																																																															2
TGAGGA	1																																																																																															1
TGAGGC	1																																																																																															1
TGATGT	2																																																																																															2
TGCAGA	1																																																																																															1
TGCCAC		1																																																																																														1
TGCCCT	1																																																																																															1
TGCGGC	1																																																																																															1
TGCGGT	1																																																																																															1
TGCTGG	1																																																																																															1
TGCTGT	1	1													1																																																																																	3
TGCTTC	2																																																																																															2
TGGAGC	1																																																																																															1
TGGCTA	1																																																																																															1
TGGGGT	1																																																																																															1
TGGGTT	1																																																																																															1
TGGTAG								1																																																																																								1
TGGTGA	2																																																																																															2
TGGTGT	1																																																																																															1
TGTAGT	1																																																																																															1
TGTATG	1																																																																																															1
TGTCCT	1																																																																																															1
TGTCGT	1																																																																																															1
TGTTGC	2																																																																																															2
TTAATA	2																																																																																															2
TTAATT	3																																																																																															3
TTACTA	1																																																																																															1
TTAGAT	1																																																																																															1
TTATTT	4																																																																																															4
TTCAAC	1																																																																																															1
TTCGGG	1																																																																																															1
TTCTCA	1																																																																																															1
TTCTCT	1																																																																																															1
TTCTTG	1																																																																																															1
TTCTTT	1	2	1																																																																																													4
TTGGGT	1																																																																																															1
TTGTAG	1																																																																																															1
TTTACC	1																																																																																															1
TTTAGA	1																																																																																															1
TTTATT	7	1																																																																																														8
TTTCAA	1																																																																																															1
TTTCAC	1																																																																																															1
TTTCCC		1																																																																																														1
TTTCCG	1																																																																																															1
TTTCTC	2																																																																																															2
TTTCTT	9																																																																																															9
TTTGTT	1																																																																																															1
TTTTAA	1																																																																																															1
TTTTAC	1																																																																																															1
TTTTAT	4	3	1																																																																																													8
TTTTCA	3																																																																																															3
TTTTCC	1																																																																																															1
TTTTCT	9	3	1																																																																																													13
TTTTGA			1																																																																																													1
TTTTGC		1																																																																																														1
TTTTGG	1																																																																																															1
TTTTTA	9	1	1																																																																																													11
TTTTTC	10	1	1																																																																																													12

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	42	39	34	34	34	27	25	14	21	18	8	13	6	7	8	6	7	9	4	5	7	6	8	10	5	1	2	2	5	1	5	5	3			2	1	3		1	2	1		1	3		1	1		1				2					1	1																		2	444
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	7	7	2	1	4	3	1					1					1			3				1									1	1		1																									2																	46
AC/GT	-	-	-	39	15	6	3	5	4	3	3	2	3	2		2	1	2	1	2		1				1		1					1														4	1																																																102
AG/CT	-	-	-	99	53	28	26	16	11	7	4	6	2	4	2		2	2		1	2	1			1	1																																																																						268
AT/AT	-	-	-	132	38	22	27	12	7	5	3	2	1	1	1		1																																																																															252
CG/CG	-	-	-	3			1																																																																																									4
AAC/GTT	-	-	20	11	11	2	3	1		1	1	1																																																																																				51
AAG/CTT	-	-	58	30	11	6	6	3	2	3					1			1				1	1				1			1	4																																																																	129
AAT/ATT	-	-	48	27	9	5	1	3		4	2																				4																																																																	103
ACC/GGT	-	-	22	6	5		2	2			1																																																																																					38
ACG/CGT	-	-	10	1		1		1			1																																																																																					14
ACT/AGT	-	-	14	5	3	2	1	1	2												1	1					1				1																																																																	32
AGC/CTG	-	-	27	15	4	4		3																																																																																								53
AGG/CCT	-	-	12	6	5	3	3	1			1	1	1						1										1																																																																			35
ATC/ATG	-	-	24	12	2	3	2	1	1	1	1			1							1			1																																																																								50
CCG/CGG	-	-	20	3	1	2																																																																																										26
AAAC/GTTT	-	3																																																																																														3
AAAG/CTTT	-	53	28	18	4	1	3	3	1	1				1																																																																																		113
AAAT/ATTT	-	46	14	1	1	1	2	1																																																																																								66
AACC/GGTT	-	1		1																																																																																												2
AACT/AGTT	-	2			1																																																																																											3
AAGC/CTTG	-	2																																																																																														2
AAGG/CCTT	-	5																																																																																														5
AAGT/ACTT	-	1																																																																																														1
AATC/ATTG	-	15	5	6	2																																																																																											28
AATG/ATTC	-	6	2	1																																																																																												9
AATT/AATT	-	7			1	1																																																																																										9
ACAG/CTGT	-			1		1																																																																																										2
ACAT/ATGT	-	28	11	7	2	2	1	1																																																																																								52
ACCG/CGGT	-	1																																																																																														1
ACCT/AGGT	-	2			1		1																																																																																									4
ACGC/CGTG	-						1																																																																																									1
ACTC/AGTG	-	8	1	1																																																																																												10
ACTG/AGTC	-	3	1																																																																																													4
AGAT/ATCT	-	7	3		1																																																																																											11
AGCC/CTGG	-	1																																																																																														1
AGCG/CGCT	-	1																																																																																														1
AGCT/AGCT	-	1																																																																																														1
AGGG/CCCT	-	3																																																																																														3
ATCC/ATGG	-	5	1		1																																																																																											7
ATGC/ATGC	-	1																																																																																														1
AAAAC/GTTTT	14	3	1																																																																																													18
AAAAG/CTTTT	201	63	14	5	1																																																																																											284
AAAAT/ATTTT	114	28	6	4		1			1								1																																																																															155
AAACC/GGTTT	5																																																																																															5
AAACG/CGTTT	2	1																																																																																														3
AAACT/AGTTT	5																																																																																															5
AAAGC/CTTTG	3	2																																																																																														5
AAAGG/CCTTT	24																																																																																															24
AAAGT/ACTTT	2																																																																																															2
AAATC/ATTTG	7	1	1	1																																																																																												10
AAATG/ATTTC	11	1	1																																																																																													13
AAATT/AATTT	25																																																																																															25
AACAC/GTGTT	3																																																																																															3
AACAT/ATGTT	1																																																																																															1
AACCC/GGGTT	9																																																																																															9
AACCG/CGGTT	3																																																																																															3
AACCT/AGGTT	3	1																																																																																														4
AACGC/CGTTG	2																																																																																															2
AACGG/CCGTT	1																																																																																															1
AACTC/AGTTG	2																																																																																															2
AACTG/AGTTC	1																																																																																															1
AAGAC/CTTGT	5	1																																																																																														6
AAGAG/CTCTT	15	1	1																																																																																													17
AAGAT/ATCTT	1																																																																																															1
AAGCC/CTTGG	1																																																																																															1
AAGCT/AGCTT	1																																																																																															1
AAGGG/CCCTT	10	1																																																																																														11
AAGTC/ACTTG	4																																																																																															4
AAGTG/ACTTC	1																																																																																															1
AATAC/ATTGT	4																																																																																															4
AATAG/ATTCT	1	1																																																																																														2
AATAT/ATATT	23																																																																																															23
AATCC/ATTGG	8																																																																																															8
AATCT/AGATT	3																																																																																															3
AATGC/ATTGC	4	2																																																																																														6
AATGG/ATTCC	2	1																																																																																														3
AATGT/ACATT	2																																																																																															2
AATTC/AATTG	5	1																																																																																														6
ACACC/GGTGT	1																																																																																															1
ACACG/CGTGT	2																																																																																															2
ACACT/AGTGT	1	1																																																																																														2
ACAGC/CTGTG	1																																																																																															1
ACAGG/CCTGT	3																																																																																															3
ACAGT/ACTGT	10																																																																																															10
ACATC/ATGTG	5																																																																																															5
ACATG/ATGTC	3	1																																																																																														4
ACCAG/CTGGT	2																																																																																															2
ACCAT/ATGGT	7																																																																																															7
ACCCC/GGGGT	2																																																																																															2
ACCCG/CGGGT	1																																																																																															1
ACCCT/AGGGT	1	1																																																																																														2
ACCGG/CCGGT	1																																																																																															1
ACCGT/ACGGT	3																																																																																															3
ACCTC/AGGTG	1																																																																																															1
ACCTG/AGGTC	1																																																																																															1
ACGAG/CGTCT	3	1																																																																																														4
ACGAT/ATCGT	1																																																																																															1
ACGCC/CGTGG	1																																																																																															1
ACGGC/CCGTG	1																																																																																															1
ACGGG/CCCGT	1		1																																																																																													2
ACTAG/AGTCT	4	1																																																																																														5
ACTAT/AGTAT	3																																																																																															3
ACTCC/AGTGG	1																																																																																															1
ACTCG/AGTCG		1																																																																																														1
ACTCT/AGAGT	1																																																																																															1
ACTGG/AGTCC		1																																																																																														1
AGAGC/CTCTG	1																																																																																															1
AGAGG/CCTCT	7		1																																																																																													8
AGATC/ATCTG		2																																																																																														2
AGATG/ATCTC	9	2	1	1																																																																																												13
AGCAT/ATGCT	2																																																																																															2
AGCCC/CTGGG	2																																																																																															2
AGCCG/CGGCT	2																																																																																															2
AGCGG/CCGCT	1																																																																																															1
AGCTC/AGCTG	7																																																																																															7
AGGAT/ATCCT	5																																																																																															5
AGGCG/CCTCG	2	1																																																																																														3
AGGGG/CCCCT	8	1																																																																																														9
ATATC/ATATG	8																																																																																															8
ATCCC/ATGGG	5	1																																																																																														6
ATCGC/ATGCG	1																																																																																															1
AAAAAC/GTTTTT	4	1																																																																																														5
AAAAAG/CTTTTT	81	17	4	2																																																																																												104
AAAAAT/ATTTTT	65	10	6			1																																																																																										82
AAAACC/GGTTTT	2																																																																																															2
AAAAGC/CTTTTG	3	1																																																																																														4
AAAAGG/CCTTTT	7	1																																																																																														8
AAAAGT/ACTTTT	2																																																																																															2
AAAATC/ATTTTG		1	1																																																																																													2
AAAATG/ATTTTC	7																																																																																															7
AAAATT/AATTTT	5																																																																																															5
AAACAC/GTGTTT	1																																																																																															1
AAACAG/CTGTTT		1																																																																																														1
AAACCC/GGGTTT	5	1																																																																																														6
AAACGG/CCGTTT	1																																																																																															1
AAACTG/AGTTTC	1																																																																																															1
AAAGAC/CTTTGT	2																																																																																															2
AAAGAG/CTCTTT	6	1	1																																																																																													8
AAAGAT/ATCTTT	2																																																																																															2
AAAGGG/CCCTTT	2	1	1																																																																																													4
AAAGGT/ACCTTT	1																																																																																															1
AAAGTC/ACTTTG	1																																																																																															1
AAAGTG/ACTTTC	1																																																																																															1
AAATAG/ATTTCT	2																																																																																															2
AAATAT/ATATTT	2		1																																																																																													3
AAATCC/ATTTGG	1																																																																																															1
AAATCT/AGATTT	2																																																																																															2
AAATGG/ATTTCC	1	1																																																																																														2
AAATGT/ACATTT		1																																																																																														1
AAATTG/AATTTC	1																																																																																															1
AAATTT/AAATTT	1																																																																																															1
AACAAG/CTTGTT	4	2																																																																																														6
AACAAT/ATTGTT	1																																																																																															1
AACACC/GGTGTT	2	1																																																																																														3
AACAGC/CTGTTG	6	1	1												1																																																																																	9
AACAGG/CCTGTT	4																																																																																															4
AACATC/ATGTTG	3																																																																																															3
AACATG/ATGTTC	1																																																																																															1
AACCAC/GGTTGT	4																																																																																															4
AACCAT/ATGGTT	1																																																																																															1
AACCCC/GGGGTT	4																																																																																															4
AACCCG/CGGGTT	2																																																																																															2
AACCGC/CGGTTG	1																																																																																															1
AACCTC/AGGTTG	1																																																																																															1
AACCTG/AGGTTC	1																																																																																															1
AACGAC/CGTTGT	3																																																																																															3
AACGCC/CGTTGG			1																																																																																													1
AACGTC/ACGTTG	1																																																																																															1
AACTAC/AGTTGT	2																																																																																															2
AACTAT/AGTTAT	1																																																																																															1
AACTGC/AGTTGC	1																																																																																															1
AACTTC/AAGTTG	1																																																																																															1
AAGAAT/ATTCTT	1																																																																																															1
AAGACC/CTTGGT	1																																																																																															1
AAGACG/CGTCTT	4																																																																																															4
AAGAGG/CCTCTT	9	1																																																																																														10
AAGATG/ATCTTC		1																																																																																														1
AAGCAG/CTGCTT	3																																																																																															3
AAGCCG/CGGCTT	1		1																																																																																													2
AAGCGG/CCGCTT	1																																																																																															1
AAGGAC/CCTTGT	1																																																																																															1
AAGGAG/CCTTCT	1																																																																																															1
AAGGCG/CCTTCG	1																																																																																															1
AAGGGC/CCCTTG	2																																																																																															2
AAGTAG/ACTTCT	1	1																																																																																														2
AAGTCC/ACTTGG	2																																																																																															2
AAGTGG/ACTTCC	1																																																																																															1
AATACC/ATTGGT	1																																																																																															1
AATAGT/ACTATT	2																																																																																															2
AATATT/AATATT	5																																																																																															5
AATCAC/ATTGTG	2																																																																																															2
AATCAT/ATGATT	4																																																																																															4
AATCCC/ATTGGG		1	1																																																																																													2
AATCGC/ATTGCG	1																																																																																															1
AATGAG/ATTCTC	3																																																																																															3
AATGCC/ATTGGC	2																																																																																															2
AATGGC/ATTGCC	2																																																																																															2
AATGGG/ATTCCC	1																																																																																															1
AATGGT/ACCATT	1																																																																																															1
AATGTC/ACATTG	1																																																																																															1
AATGTG/ACATTC	2																																																																																															2
AATTAC/AATTGT	1																																																																																															1
AATTAG/AATTCT	1																																																																																															1
AATTAT/AATTAT	3																																																																																															3
AATTCC/AATTGG	1																																																																																															1
ACACAG/CTGTGT	1																																																																																															1
ACACAT/ATGTGT	2																																																																																															2
ACACCC/GGGTGT		1																																																																																														1
ACACGC/CGTGTG	1																																																																																															1
ACAGAG/CTCTGT	1																																																																																															1
ACAGCG/CGCTGT	1																																																																																															1
ACAGGC/CCTGTG		1																																																																																														1
ACAGGG/CCCTGT	2																																																																																															2
ACAGTC/ACTGTG	1																																																																																															1
ACATAG/ATGTCT	1																																																																																															1
ACATAT/ATATGT	3																																																																																															3
ACATCT/AGATGT	1																																																																																															1
ACATGC/ATGTGC	1																																																																																															1
ACATGG/ATGTCC	2																																																																																															2
ACATGT/ACATGT	1	1																																																																																														2
ACCACG/CGTGGT	1																																																																																															1
ACCACT/AGTGGT	2							2																																																																																								4
ACCAGC/CTGGTG	2	1																																																																																														3
ACCATC/ATGGTG	4																																																																																															4
ACCATG/ATGGTC	1																																																																																															1
ACCCCC/GGGGGT	1																																																																																															1
ACCCTC/AGGGTG		1																																																																																														1
ACCCTG/AGGGTC	1																																																																																															1
ACCGAG/CGGTCT	1																																																																																															1
ACCGCC/CGGTGG	2																																																																																															2
ACCGGC/CCGGTG		1																																																																																														1
ACCGGG/CCCGGT		1																																																																																														1
ACCGTC/ACGGTG	1																																																																																															1
ACCTAT/AGGTAT	1																																																																																															1
ACCTCC/AGGTGG		1																																																																																														1
ACCTCG/AGGTCG	1																																																																																															1
ACCTGC/AGGTGC	1																																																																																															1
ACGACT/AGTCGT	1																																																																																															1
ACGAGC/CGTGCT	1																																																																																															1
ACGAGG/CCTCGT	5																																																																																															5
ACGATC/ATCGTG	2																																																																																															2
ACGATG/ATCGTC	10						1																																																																																									11
ACGCAG/CGTCTG	1																																																																																															1
ACGCGG/CCGCGT	1																																																																																															1
ACGCTC/AGCGTG	2																																																																																															2
ACGCTG/AGCGTC	2																																																																																															2
ACGGAG/CCGTCT	1																																																																																															1
ACGGCC/CCGTGG	3																																																																																															3
ACGTAG/ACGTCT		1																																																																																														1
ACTATG/AGTCAT	1																																																																																															1
ACTCAG/AGTCTG	1																																																																																															1
ACTCAT/AGTATG	1																																																																																															1
ACTCCC/AGTGGG	1																																																																																															1
ACTCCG/AGTCGG	1																																																																																															1
ACTCGC/AGTGCG	1																																																																																															1
ACTCTC/AGAGTG	1																																																																																															1
ACTGAT/AGTATC	1																																																																																															1
ACTGCC/AGTGGC	2	1																																																																																														3
ACTGCG/AGTCGC	2																																																																																															2
ACTGCT/AGCAGT	3																																																																																															3
ACTGGC/AGTGCC	1																																																																																															1
AGAGCC/CTCTGG	4																																																																																															4
AGAGCG/CGCTCT	3																																																																																															3
AGAGCT/AGCTCT	1		1																																																																																													2
AGAGGC/CCTCTG	1																																																																																															1
AGAGGG/CCCTCT	6	1	1																																																																																													8
AGATCG/ATCTCG	1																																																																																															1
AGATGC/ATCTGC	1																																																																																															1
AGCAGG/CCTGCT	2	1																																																																																														3
AGCATC/ATGCTG	3																																																																																															3
AGCCAT/ATGGCT	1																																																																																															1
AGCCCC/CTGGGG	1	1																																																																																														2
AGCCCG/CGGGCT	1	1																																																																																														2
AGCCGC/CGGCTG	6	2																																																																																														8
AGCCGG/CCGGCT	4																																																																																															4
AGCCTC/AGGCTG	1																																																																																															1
AGCCTG/AGGCTC	4		1																																																																																													5
AGCGAT/ATCGCT		1																																																																																														1
AGCGCG/CGCGCT	1																																																																																															1
AGCGGC/CCGCTG		2																																																																																														2
AGCGGG/CCCGCT	1																																																																																															1
AGCTCC/AGCTGG	5																																																																																															5
AGCTGC/AGCTGC	1																																																																																															1
AGGATC/ATCCTG	1																																																																																															1
AGGATG/ATCCTC	8	1							1																																																																																							10
AGGCGC/CCTGCG	1	1																																																																																														2
AGGCGG/CCGCCT	3																																																																																															3
AGGGAT/ATCCCT	1																																																																																															1
AGGGGG/CCCCCT	2																																																																																															2
ATATCC/ATATGG	1																																																																																															1
ATATCG/ATATCG	1																																																																																															1
ATATGC/ATATGC	1																																																																																															1
ATCCCC/ATGGGG	1																																																																																															1
ATCCCG/ATCGGG	2																																																																																															2
ATCGCC/ATGGCG	2																																																																																															2
ATCGGC/ATGCCG	2																																																																																															2
CCCGCG/CGCGGG	1																																																																																															1
CCGGCG/CCGGCG	1																																																																																															1
