Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-4/megassr/results/hub_GCA_039267165.1/fasta/hub_GCA_039267165.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              36
Total size of examined sequences (bp):           37309636
Total number of identified SSRs:                 3624
Number of SSR containing sequences:              33
Number of sequences containing more than 1 SSR:  30
Number of SSRs present in compound formation:    317


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	494
2	712
3	557
4	373
5	895
6	593

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	22	21	19	15	18	14	9	8	10	9	5	7	2	4	4	2	4	3	2	3	3	5	3	1	1	2	1	3	3	1	1	1	2	2		1						1					3	1		1		1																							1			1	220
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	2	3	2	2	1	2	1	1				1					1										1						1																	1																												22
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	6	5	3	1	3	1				2				1								1																			1							1																															25
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	20	18	15	19	16	14	13	8	14	7	4	4	6	1	5	4	6	5	2	5	2		2	1	2	3	1	2	1	5	2	2	1	2	1	2		1		1	1		1		2		1	1					1	1																			1					1	227
AC	-	-	-	8	4		1	2	1		2		2	1		1						1																										1																																																24
AG	-	-	-	26	18	7	12	4	6	2	3	3		1	1			2				1			1	1																																																																						88
AT	-	-	-	84	28	17	16	8	8	4	2	2		1			1																																																																															171
CA	-	-	-	15	2	2	1	1	2			2							1	1													1														2																																																	30
CG	-	-	-				1																																																																																									1
CT	-	-	-	24	9	3	2	2	1	1		1	1	1	1																																																																																	46
GA	-	-	-	13	6	7	5		2	2	1	2	1								2																																																																											41
GC	-	-	-	3																																																																																												3
GT	-	-	-	10	3			1		1	1					1										1																																																																						18
TA	-	-	-	102	26	12	16	6		2	2	1	1	1	1																																																																																	170
TC	-	-	-	34	20	11	7	9	2	3				2			1	1		1																																																																												91
TG	-	-	-	6	8	2	1		1	2		1		1			1	2		1								1																			2																																																	29
AAC	-	-	3	1	1	1				1																																																																																						7
AAG	-	-	14	8	1		2		1						1								1																																																																									28
AAT	-	-	16	6	3	1		2		2																					1																																																																	31
ACA	-	-	3		1		1																																																																																									5
ACC	-	-	3	2			1																																																																																									6
ACG	-	-				1																																																																																										1
ACT	-	-	3	2		1		1																			1				1																																																																	9
AGA	-	-	6	5	2																																																																																											13
AGC	-	-	5	3	1																																																																																											9
AGG	-	-		1		1																																																																																										2
AGT	-	-	1		1																																																																																											2
ATA	-	-	4	9	2	1		1		1							1														1																																																																	20
ATC	-	-	1					1																																																																																								2
ATG	-	-	5	3	1	2																																																																																										11
ATT	-	-	9	2	2	2					1																																																																																					16
CAA	-	-	9		1	1	1	1		1																																																																																						14
CAC	-	-	5	1	2																																																																																											8
CAG	-	-	11	1		1		1																																																																																								14
CAT	-	-	2	1	1	1			1																																																																																							6
CCA	-	-	4		1			1																																																																																								6
CCG	-	-	3		1																																																																																											4
CCT	-	-		1	1		1					1	1																																																																																			5
CGA	-	-	4																																																																																													4
CGC	-	-				1																																																																																										1
CGG	-	-	2	1		1																																																																																										4
CGT	-	-	1																																																																																													1
CTA	-	-	3			1															1																																																																											5
CTC	-	-	2				1	1			1																																																																																					5
CTG	-	-	1	2	2	1																																																																																										6
CTT	-	-	10	4	2	2	2			1																					2																																																																	23
GAA	-	-	13	3	1	1	1	1										1				1								1	1																																																																	24
GAC	-	-	2					1			1																																																																																					4
GAG	-	-	6	2	1	1																																																																																										10
GAT	-	-	6				1							1							1																																																																											9
GCA	-	-	6	2																																																																																												8
GCC	-	-	4																																																																																													4
GCG	-	-	3																																																																																													3
GCT	-	-	1	1																																																																																												2
GGA	-	-	3	1	2																							1																																																																				7
GGC	-	-	8	2																																																																																												10
GGT	-	-	2	2																																																																																												4
GTA	-	-	3				1																																																																																									4
GTC	-	-	2																																																																																													2
GTG	-	-	1								1																																																																																					2
GTT	-	-	1	2	3		1																																																																																									7
TAA	-	-	12	5	1	1																																																																																										19
TAC	-	-	1	2	2				1													1																																																																										7
TAG	-	-	3	1					1																																																																																							5
TAT	-	-	16	7	1					2	1																																																																																					27
TCA	-	-	6	2						1																																																																																						9
TCC	-	-	1		1		2												1																																																																													5
TCG	-	-	1	1																																																																																												2
TCT	-	-	3	5	2	1		1		1																					1																																																																	14
TGA	-	-	4	5																				1																																																																								10
TGC	-	-	3	4	1	2		2																																																																																								12
TGG	-	-	6	1	1		1	1																																																																																								10
TGT	-	-	2	3	3																																																																																											8
TTA	-	-	14	7	2	1	2	1																							1																																																																	28
TTC	-	-	11	5	3	2	1	1	1	1																	1																																																																					26
TTG	-	-	1	4	1							1																																																																																				7
AAAG	-	15	4	4	2		1		1																																																																																							27
AAAT	-	17	4																																																																																													21
AAGA	-	3	3																																																																																													6
AATA	-	5	1				1	1																																																																																								8
AATC	-	3																																																																																														3
AATT	-	8				1																																																																																										9
ACAG	-					1																																																																																										1
ACAT	-	4																																																																																														4
ACCG	-	1																																																																																														1
AGAA	-	4	1	3	1																																																																																											9
AGAT	-	1	2																																																																																													3
AGCA	-	1																																																																																														1
AGCT	-	1																																																																																														1
AGGA	-	1																																																																																														1
AGGG	-	1																																																																																														1
AGTG	-	1																																																																																														1
ATAA	-	11	3	1																																																																																												15
ATAC	-	4		1																																																																																												5
ATAG	-	1	1																																																																																													2
ATCA	-	2	2																																																																																													4
ATGA	-			1																																																																																												1
ATGG	-	2																																																																																														2
ATGT	-	3	2	1	1																																																																																											7
ATTA	-	2			1																																																																																											3
ATTC	-	1	1																																																																																													2
ATTG	-	2																																																																																														2
ATTT	-	6	2			1																																																																																										9
CAAC	-			1																																																																																												1
CAAG	-	1																																																																																														1
CAAT	-	1		1																																																																																												2
CACG	-						1																																																																																									1
CACT	-	1																																																																																														1
CATA	-	2	2	1		1		1																																																																																								7
CCCT	-	1																																																																																														1
CCTA	-	1																																																																																														1
CTAC	-	1																																																																																														1
CTAT	-	2																																																																																														2
CTCC	-	1																																																																																														1
CTTC	-	2																																																																																														2
CTTT	-	3	5	2						1																																																																																						11
GAAA	-	2	3				1							1																																																																																		7
GAAT	-	1	1																																																																																													2
GACT	-	1																																																																																														1
GAGC	-	1																																																																																														1
GAGT	-	1																																																																																														1
GATA	-	1																																																																																														1
GATG	-	1	1																																																																																													2
GATT	-			1	1																																																																																											2
GCCA	-	1																																																																																														1
GGAT	-	1																																																																																														1
GGTA	-				1																																																																																											1
GTAT	-	3	2			1																																																																																										6
GTCA	-	1																																																																																														1
GTGA	-	2																																																																																														2
GTTA	-				1																																																																																											1
TAAA	-	10	1																																																																																													11
TAAT	-	1																																																																																														1
TACA	-	6	2	2	1		1																																																																																									12
TACT	-	1																																																																																														1
TAGG	-						1																																																																																									1
TAGT	-	2																																																																																														2
TATC	-				1																																																																																											1
TATG	-	2	1																																																																																													3
TATT	-	5																																																																																														5
TCAA	-	2		1																																																																																												3
TCAC	-	1	1																																																																																													2
TCAT	-	3																																																																																														3
TCCA	-	1																																																																																														1
TCCT	-	2																																																																																														2
TCTA	-	2																																																																																														2
TCTG	-			1																																																																																												1
TCTT	-	4	2	2																																																																																												8
TGAC	-	1																																																																																														1
TGAG	-	2																																																																																														2
TGAT	-	2	1																																																																																													3
TGCA	-	1																																																																																														1
TGTA	-	4	2	2																																																																																												8
TTAA	-	3																																																																																														3
TTAT	-	7	1		1																																																																																											9
TTCA	-	1																																																																																														1
TTCT	-	5	1	1																																																																																												7
TTGA	-	4	2	1	1																																																																																											8
TTGG	-	1																																																																																														1
TTGT	-	1																																																																																														1
TTTA	-	15	4				1																																																																																									20
TTTC	-	17	7	7		1	1	3																																																																																								36
TTTG	-	2																																																																																														2
AAAAC	4	2	1																																																																																													7
AAAAG	40	18	8	3																																																																																												69
AAAAT	28	8	3						1																																																																																							40
AAACA	2																																																																																															2
AAACC	2																																																																																															2
AAACG		1																																																																																														1
AAAGA	16	6																																																																																														22
AAAGG	6																																																																																															6
AAATA	9	2																																																																																														11
AAATC	3		1																																																																																													4
AAATG	2																																																																																															2
AAATT	4																																																																																															4
AACAA	2																																																																																															2
AACCC	1																																																																																															1
AACTA	2																																																																																															2
AAGAA	9	5																																																																																														14
AAGAC	1																																																																																															1
AAGAG	1																																																																																															1
AAGGA	2																																																																																															2
AAGGG	2																																																																																															2
AAGTC	1																																																																																															1
AAGTG	1																																																																																															1
AATAA	12	2																																																																																														14
AATAC	1																																																																																															1
AATAT	6																																																																																															6
AATCC	3																																																																																															3
AATCT	1																																																																																															1
AATGA	1																																																																																															1
AATGC		1																																																																																														1
AATTA	5																																																																																															5
AATTC		1																																																																																														1
AATTT	3																																																																																															3
ACAAA	1																																																																																															1
ACAAC	2																																																																																															2
ACACC	1																																																																																															1
ACACG	1																																																																																															1
ACAGT	1																																																																																															1
ACATC	1																																																																																															1
ACATG	2																																																																																															2
ACCAA	1																																																																																															1
ACCCA	1																																																																																															1
ACCGT	1																																																																																															1
ACCTG	1																																																																																															1
ACGAA	1																																																																																															1
ACGAG	1																																																																																															1
ACGCA	1																																																																																															1
ACTAG	1																																																																																															1
ACTGG		1																																																																																														1
ACTGT	1																																																																																															1
ACTTG	1																																																																																															1
AGAAA	16	2																																																																																														18
AGAAG	5																																																																																															5
AGACA	1																																																																																															1
AGACT		1																																																																																														1
AGAGA	2																																																																																															2
AGATC		1																																																																																														1
AGATG	2																																																																																															2
AGCAA		1																																																																																														1
AGCCA	1																																																																																															1
AGCCC	1																																																																																															1
AGCTA	1																																																																																															1
AGGAG	1																																																																																															1
AGGAT	2																																																																																															2
AGGGA	4																																																																																															4
AGGTG	1																																																																																															1
AGGTT	1																																																																																															1
AGTAC	3																																																																																															3
AGTCA	1																																																																																															1
ATAAA	14																																																																																															14
ATAAT	1																																																																																															1
ATACC	1																																																																																															1
ATAGG	1																																																																																															1
ATAGT	1																																																																																															1
ATATA	3																																																																																															3
ATATT	6																																																																																															6
ATCAC	1																																																																																															1
ATCCC	3																																																																																															3
ATCCT	1																																																																																															1
ATCTA	1																																																																																															1
ATCTC		1																																																																																														1
ATGAG	1																																																																																															1
ATGAT	2																																																																																															2
ATGCA	2	1																																																																																														3
ATGGG		1																																																																																														1
ATGTA	1																																																																																															1
ATTAA	9		1																																																																																													10
ATTAT	1																																																																																															1
ATTTA	2																																																																																															2
ATTTC	1																																																																																															1
ATTTG	1																																																																																															1
ATTTT	12	5	1															1																																																																														19
CAAAA	2																																																																																															2
CAAAG	1	1																																																																																														2
CAAAT	1																																																																																															1
CAACA	1																																																																																															1
CAAGA		1																																																																																														1
CAATA	2																																																																																															2
CAATG	1																																																																																															1
CAATT	1																																																																																															1
CACAT	1																																																																																															1
CACCC	1																																																																																															1
CACGG	1																																																																																															1
CAGAT		1																																																																																														1
CAGCC	1																																																																																															1
CAGGA	1																																																																																															1
CATAT	1																																																																																															1
CATCT	1			1																																																																																												2
CATTT	2																																																																																															2
CCAAC	3																																																																																															3
CCATA	1																																																																																															1
CCATT	1	1																																																																																														2
CCCAA	1																																																																																															1
CCCAT	2																																																																																															2
CCCCT	2																																																																																															2
CCCGA	1																																																																																															1
CCCTC	3																																																																																															3
CCGGT	1																																																																																															1
CCGTA	1																																																																																															1
CCTAA		1																																																																																														1
CCTCC		1																																																																																														1
CCTTC	1																																																																																															1
CCTTT	2																																																																																															2
CGCCT	1																																																																																															1
CGGCT	1																																																																																															1
CGTCT		1																																																																																														1
CGTTG	1																																																																																															1
CTAAA	1																																																																																															1
CTACA		1																																																																																														1
CTAGT	1																																																																																															1
CTATG	1																																																																																															1
CTCAA	1																																																																																															1
CTCAG	1																																																																																															1
CTCAT	1																																																																																															1
CTCCA	1																																																																																															1
CTCTA	1																																																																																															1
CTCTC			1																																																																																													1
CTCTT	1																																																																																															1
CTGAA	1																																																																																															1
CTTCC	1																																																																																															1
CTTCT	3																																																																																															3
CTTTC	4																																																																																															4
CTTTG	2																																																																																															2
CTTTT	17	3		1																																																																																												21
GAAAA	10	3																																																																																														13
GAAAC	1																																																																																															1
GAAAT	2		1																																																																																													3
GAACC	1																																																																																															1
GAAGG	1																																																																																															1
GAATA	1																																																																																															1
GAATT	2																																																																																															2
GACGG	1																																																																																															1
GACTT	1																																																																																															1
GAGAG	1																																																																																															1
GAGAT	2	1	1																																																																																													4
GAGGA	2																																																																																															2
GAGGG	1																																																																																															1
GATAA	1																																																																																															1
GATGA	1																																																																																															1
GATGC	1																																																																																															1
GATGT	1																																																																																															1
GATTG	2																																																																																															2
GCCTC	1																																																																																															1
GCGTG	1																																																																																															1
GCTCA	2																																																																																															2
GCTGA	2																																																																																															2
GGAAA	1																																																																																															1
GGAAG		1																																																																																														1
GGAAT	1																																																																																															1
GGACA	1																																																																																															1
GGAGA	2																																																																																															2
GGAGC	1																																																																																															1
GGATA	1																																																																																															1
GGCTC	1																																																																																															1
GGGAA	1																																																																																															1
GGGAC			1																																																																																													1
GGGAG	1																																																																																															1
GGGTG	1																																																																																															1
GGGTT	1																																																																																															1
GGTAG		1																																																																																														1
GGTAT	1																																																																																															1
GGTCT	1																																																																																															1
GGTTC	1																																																																																															1
GTACA	2																																																																																															2
GTATG	3																																																																																															3
GTCCC	1																																																																																															1
GTCCT	1																																																																																															1
GTCGA		1																																																																																														1
GTCTA	1																																																																																															1
GTCTC	1																																																																																															1
GTCTG	1																																																																																															1
GTCTT	1																																																																																															1
GTGTA	1																																																																																															1
GTTAG	1																																																																																															1
GTTGA	1																																																																																															1
GTTGG	1																																																																																															1
GTTTG	1																																																																																															1
GTTTT	1																																																																																															1
TAAAA	8	1																																																																																														9
TAAAC	1																																																																																															1
TAAAT	1																																																																																															1
TAACA	1																																																																																															1
TAATA	4																																																																																															4
TAATC	1																																																																																															1
TAATG	1																																																																																															1
TAATT	6																																																																																															6
TACAA	1																																																																																															1
TACCA	1																																																																																															1
TACCC	1																																																																																															1
TACGG	1																																																																																															1
TACTG	1																																																																																															1
TAGAA	1																																																																																															1
TAGGT	1																																																																																															1
TAGTA	1																																																																																															1
TAGTC	1																																																																																															1
TAGTT	1																																																																																															1
TATAA	1																																																																																															1
TATAC	1																																																																																															1
TATAT	5																																																																																															5
TATCG	1																																																																																															1
TATTA	3																																																																																															3
TATTT	13	2		1																																																																																												16
TCAAA	1																																																																																															1
TCACA	1																																																																																															1
TCAGC	1																																																																																															1
TCATA	1																																																																																															1
TCATT		1																																																																																														1
TCCAA	1																																																																																															1
TCCCC	1																																																																																															1
TCCTC	1																																																																																															1
TCGCC		1																																																																																														1
TCGGT	1																																																																																															1
TCTAT		1																																																																																														1
TCTCG	1																																																																																															1
TCTCT	1	1	1																																																																																													3
TCTGC	1																																																																																															1
TCTTC	2																																																																																															2
TCTTG	1																																																																																															1
TCTTT	14	3			1																																																																																											18
TGAAA	2																																																																																															2
TGACA	1	1																																																																																														2
TGAGA	1																																																																																															1
TGAGC	1																																																																																															1
TGATA	3																																																																																															3
TGATT	1																																																																																															1
TGCTA	1																																																																																															1
TGCTG	1																																																																																															1
TGGAT	2																																																																																															2
TGGGT	1																																																																																															1
TGTAC	2																																																																																															2
TGTCG	1																																																																																															1
TGTCT	1																																																																																															1
TGTTT		1																																																																																														1
TTAAA	6																																																																																															6
TTAAT	11																																																																																															11
TTACT	1																																																																																															1
TTATA	4																																																																																															4
TTATT	15	3																																																																																														18
TTCCT	1																																																																																															1
TTCTT	11	3																																																																																														14
TTGAA	2																																																																																															2
TTGCA	1																																																																																															1
TTTAA	6																																																																																															6
TTTAC	1																																																																																															1
TTTAT	20	3		2																																																																																												25
TTTCA	1																																																																																															1
TTTCC	8																																																																																															8
TTTCT	20	7	2																																																																																													29
TTTGA				1																																																																																												1
TTTGG	1																																																																																															1
TTTGT	1																																																																																															1
TTTTA	27	3	2	1		1																																																																																										34
TTTTC	46	13	4	1																																																																																												64
TTTTG	1																																																																																															1
AAAAAG	11	5	1																																																																																													17
AAAAAT	15	5																																																																																														20
AAAACA	2																																																																																															2
AAAAGA	8	3																																																																																														11
AAAAGC	1																																																																																															1
AAAAGG	1	1																																																																																														2
AAAAGT	1																																																																																															1
AAAATA	8	1	1																																																																																													10
AAAATG	3																																																																																															3
AAAATT	1																																																																																															1
AAACCA	1																																																																																															1
AAAGAA	8																																																																																															8
AAAGAG	1																																																																																															1
AAAGGA	1																																																																																															1
AAATAA	4		1																																																																																													5
AAATAG	1																																																																																															1
AAATCC	1																																																																																															1
AAATCT	1																																																																																															1
AAATTA	1																																																																																															1
AACACA	1																																																																																															1
AACCCC	1																																																																																															1
AACGGA	1																																																																																															1
AAGAAA	4		1																																																																																													5
AAGAAC	2																																																																																															2
AAGAGG		1																																																																																														1
AAGCCG			1																																																																																													1
AATAAA	3		1																																																																																													4
AATACC	1																																																																																															1
AATCTA	1																																																																																															1
AATGAA	2																																																																																															2
AATGAG	1																																																																																															1
ACAACC	1																																																																																															1
ACAACT	1																																																																																															1
ACAAGA		1																																																																																														1
ACAATC	1																																																																																															1
ACAGCA	1																																																																																															1
ACCACT								1																																																																																								1
ACCAGC	1																																																																																															1
ACCCAA	1																																																																																															1
ACCGCC	1																																																																																															1
ACGACC	1																																																																																															1
ACGCTC	1																																																																																															1
ACGTCA	1																																																																																															1
ACTTGG	1																																																																																															1
AGAAAA	3	1																																																																																														4
AGAAAG	1		1																																																																																													2
AGAGAA	1																																																																																															1
AGAGAC	1																																																																																															1
AGAGCT	1																																																																																															1
AGCGTC	1																																																																																															1
AGCTCC	1																																																																																															1
AGCTGC	1																																																																																															1
AGGAAA	1																																																																																															1
AGGAAC	1																																																																																															1
AGGAGC	1																																																																																															1
AGGCGA	1																																																																																															1
AGGCGG	1																																																																																															1
AGGGCA	2																																																																																															2
AGGGTC	1																																																																																															1
AGTAGA		1																																																																																														1
AGTATC	1																																																																																															1
AGTATG	1																																																																																															1
AGTGAG	1																																																																																															1
AGTGCG	1																																																																																															1
ATAAAA	3	1																																																																																														4
ATAAAG	1																																																																																															1
ATAAAT	1																																																																																															1
ATAACT	1																																																																																															1
ATAATC	1																																																																																															1
ATAATT	3																																																																																															3
ATAGTA	1																																																																																															1
ATAGTC	1																																																																																															1
ATATTA	2																																																																																															2
ATCAAA			1																																																																																													1
ATCACA	1																																																																																															1
ATCCCC	1																																																																																															1
ATCCTC	2																																																																																															2
ATCGCC	1																																																																																															1
ATCGTG	1																																																																																															1
ATCTAC	1																																																																																															1
ATGAAC	1																																																																																															1
ATGACC	1																																																																																															1
ATGACG	1																																																																																															1
ATGAGA	1																																																																																															1
ATGATT	1																																																																																															1
ATGCTG	1																																																																																															1
ATGTAC	1																																																																																															1
ATGTCT	1																																																																																															1
ATTAAT	3																																																																																															3
ATTATA	1																																																																																															1
ATTCAC	1																																																																																															1
ATTTAA	1	1																																																																																														2
CAACAC	1																																																																																															1
CAACAG	1		1																																																																																													2
CAACCC	1																																																																																															1
CAAGAA	2																																																																																															2
CACACC		1																																																																																														1
CACATA	1																																																																																															1
CACCAA	1																																																																																															1
CACTAC								1																																																																																								1
CACTGC	1																																																																																															1
CAGCAA	1																																																																																															1
CAGCCC		1																																																																																														1
CAGCTC	1																																																																																															1
CAGGCT	1																																																																																															1
CATAGC	1																																																																																															1
CATCAA	1																																																																																															1
CATCAC	2																																																																																															2
CATCAG	1																																																																																															1
CATCGG	1																																																																																															1
CATCGT	1																																																																																															1
CATTTC	1																																																																																															1
CATTTT	1																																																																																															1
CCAAAC	2																																																																																															2
CCAAGA	1																																																																																															1
CCACAA	1																																																																																															1
CCACCT		1																																																																																														1
CCACTT	1																																																																																															1
CCAGCA	1																																																																																															1
CCATGT	1																																																																																															1
CCATTA	1																																																																																															1
CCATTC	1																																																																																															1
CCCAAT		1																																																																																														1
CCCACT	1																																																																																															1
CCCCAC	1																																																																																															1
CCCCCT	1																																																																																															1
CCCTCT	1																																																																																															1
CCGAAC	1																																																																																															1
CCGAGA	1																																																																																															1
CCGCGC	1																																																																																															1
CCGTGG	1																																																																																															1
CCTATC	1																																																																																															1
CCTCCG	1																																																																																															1
CCTCTG	1																																																																																															1
CCTGCA	1																																																																																															1
CCTTTC			1																																																																																													1
CGACCT	1																																																																																															1
CGACTC	1																																																																																															1
CGAGGA	1																																																																																															1
CGATAG		1																																																																																														1
CGATCA	1																																																																																															1
CGATGA							1																																																																																									1
CGCAGC	1	1																																																																																														2
CGCCTC	1																																																																																															1
CGGAGC	1																																																																																															1
CGGCAG		1																																																																																														1
CGGCTC	1																																																																																															1
CGTCCG	1																																																																																															1
CGTCCT	1																																																																																															1
CGTCTC	1																																																																																															1
CTACCA	1																																																																																															1
CTACTG	1																																																																																															1
CTCATC	2																																																																																															2
CTCTCC	1																																																																																															1
CTCTTC	1																																																																																															1
CTCTTT		1																																																																																														1
CTGAGC	1																																																																																															1
CTGCCG		1																																																																																														1
CTGCGA	1																																																																																															1
CTGCTA	1																																																																																															1
CTGGAG	1																																																																																															1
CTGGCA	1																																																																																															1
CTGGCT	1																																																																																															1
CTGGGG	1																																																																																															1
CTTCCT	1																																																																																															1
CTTCTA	1																																																																																															1
CTTGTT		1																																																																																														1
CTTTTT	5	1			1																																																																																											7
GAAAAA	4																																																																																															4
GAAAAG	1																																																																																															1
GAAAAT	1																																																																																															1
GAAAGG	1																																																																																															1
GAAGAC	2																																																																																															2
GAAGAG	2																																																																																															2
GAATTA	1																																																																																															1
GACAAC	1																																																																																															1
GACGAA	1																																																																																															1
GACGAG	1																																																																																															1
GACGAT	1																																																																																															1
GACGCA	1																																																																																															1
GACTAC	1																																																																																															1
GACTGC	1																																																																																															1
GAGAAA	2																																																																																															2
GAGCAC	1																																																																																															1
GAGCAG	1																																																																																															1
GAGCCA	1																																																																																															1
GAGGAA	1																																																																																															1
GAGGAT	1	1																																																																																														2
GAGGGA	2		1																																																																																													3
GATATC	1																																																																																															1
GATATG	1																																																																																															1
GATCCT	1																																																																																															1
GATGAG	1								1																																																																																							2
GATGGT	1																																																																																															1
GATGTT	1																																																																																															1
GATTGG			1																																																																																													1
GCAAAA		1																																																																																														1
GCAACC	1																																																																																															1
GCAATG	1																																																																																															1
GCACAT	1																																																																																															1
GCAGCC	2																																																																																															2
GCCACG	1																																																																																															1
GCCGAT	1																																																																																															1
GCCTGA	1		1																																																																																													2
GCCTGT		1																																																																																														1
GCGATG	1																																																																																															1
GCGATT	1																																																																																															1
GCGCAG		1																																																																																														1
GCGCCT	1																																																																																															1
GCGCTC	1																																																																																															1
GCGGCT		1																																																																																														1
GCTAGA			1																																																																																													1
GCTCCC	1																																																																																															1
GCTCCT		1																																																																																														1
GCTCTC	1																																																																																															1
GCTGCG	1																																																																																															1
GCTTCC	1																																																																																															1
GCTTCG	1																																																																																															1
GCTTCT	1																																																																																															1
GGAAAA	1																																																																																															1
GGAAAT		1																																																																																														1
GGACAG	1																																																																																															1
GGACTT	1																																																																																															1
GGAGAA	1																																																																																															1
GGAGAG		1																																																																																														1
GGAGGG	1																																																																																															1
GGCACC		1																																																																																														1
GGCATT	1																																																																																															1
GGCGCC	1																																																																																															1
GGCTCC	2																																																																																															2
GGCTCG	1	1																																																																																														2
GGCTCT	1																																																																																															1
GGCTGC	2																																																																																															2
GGGAAA		1																																																																																														1
GGGAGA	1																																																																																															1
GGGATC	1																																																																																															1
GGTCCC		1																																																																																														1
GGTGAC	1																																																																																															1
GGTGAG		1																																																																																														1
GGTGGC	1																																																																																															1
GGTTAT	1																																																																																															1
GGTTTG	1																																																																																															1
GTAAAA	1																																																																																															1
GTACAT		1																																																																																														1
GTAGCA	1																																																																																															1
GTATAG	1																																																																																															1
GTCAAA	1																																																																																															1
GTCCAT	1																																																																																															1
GTGGCA	1																																																																																															1
GTGGCC	1																																																																																															1
GTGGTT	1																																																																																															1
GTGTCT	1																																																																																															1
GTGTGC	1																																																																																															1
GTGTTG		1																																																																																														1
GTTCCT	1																																																																																															1
GTTGCA	1																																																																																															1
GTTGGC			1																																																																																													1
GTTGGG	1																																																																																															1
GTTTGG	1																																																																																															1
GTTTTG	1																																																																																															1
TAAAAA			2																																																																																													2
TAAAAT	1																																																																																															1
TAAATT	1																																																																																															1
TAATTA	2																																																																																															2
TAATTG	1																																																																																															1
TACACA	1																																																																																															1
TACATT		1																																																																																														1
TAGTAA	1																																																																																															1
TATAAA	1																																																																																															1
TATAAT	3	1																																																																																														4
TATATG	2																																																																																															2
TATTAA	3																																																																																															3
TATTTA			1																																																																																													1
TATTTT	11																																																																																															11
TCACAT	1																																																																																															1
TCACCA	1																																																																																															1
TCAGCC	1																																																																																															1
TCAGGC	1																																																																																															1
TCAGGT	1																																																																																															1
TCATCG	3																																																																																															3
TCCAAT	1																																																																																															1
TCCAGC	2																																																																																															2
TCCCTC	1																																																																																															1
TCCCTG	1																																																																																															1
TCCTCA	2																																																																																															2
TCCTCG	2																																																																																															2
TCCTCT	1																																																																																															1
TCGATC	1																																																																																															1
TCGCTG	1																																																																																															1
TCGGGA	1																																																																																															1
TCGTCA	1																																																																																															1
TCGTTG	1																																																																																															1
TCTACG		1																																																																																														1
TCTCGC	1																																																																																															1
TCTGAG	1																																																																																															1
TCTGGC	1																																																																																															1
TCTGTT		1																																																																																														1
TCTTCC	2																																																																																															2
TCTTCG	1																																																																																															1
TCTTTA	1																																																																																															1
TCTTTG	1																																																																																															1
TCTTTT	7																																																																																															7
TGAAAC	1																																																																																															1
TGAAGA		1																																																																																														1
TGACAT	1																																																																																															1
TGACGA	2																																																																																															2
TGACGC	1																																																																																															1
TGAGAA	1																																																																																															1
TGAGCG	1																																																																																															1
TGATGC	1																																																																																															1
TGATGT	1																																																																																															1
TGATTA	1																																																																																															1
TGCAGA	1																																																																																															1
TGCATA	1																																																																																															1
TGCCAC		1																																																																																														1
TGCTGG		1																																																																																														1
TGCTGT	1	1																																																																																														2
TGCTTC	2																																																																																															2
TGCTTT	2																																																																																															2
TGGCAT	1																																																																																															1
TGGGGT	1																																																																																															1
TGGTAG	1																																																																																															1
TGGTTG	1																																																																																															1
TGTAGT	1																																																																																															1
TGTATA	1																																																																																															1
TGTCCT	1																																																																																															1
TGTCGT	1																																																																																															1
TGTCTT	1																																																																																															1
TGTGAC	1																																																																																															1
TGTTGC	1																																																																																															1
TGTTTT	1																																																																																															1
TTAAAA	1																																																																																															1
TTAATA	6																																																																																															6
TTAATT	2																																																																																															2
TTATGA	1																																																																																															1
TTATTT	3																																																																																															3
TTCAAC	1																																																																																															1
TTCCTC	1																																																																																															1
TTCCTG	1																																																																																															1
TTCCTT	1																																																																																															1
TTCGGG	1																																																																																															1
TTCTTA	1																																																																																															1
TTCTTT	2	4																																																																																														6
TTGAGG	1																																																																																															1
TTGCCA	1																																																																																															1
TTGTTA	1																																																																																															1
TTTAAT	2																																																																																															2
TTTACC	1																																																																																															1
TTTATT	7	1																																																																																														8
TTTCAA	1																																																																																															1
TTTCAC	1																																																																																															1
TTTCCC	1																																																																																															1
TTTCCT	1																																																																																															1
TTTCTA	1																																																																																															1
TTTCTC	1																																																																																															1
TTTCTT	9			1																																																																																												10
TTTGAT		1																																																																																														1
TTTGGG		1																																																																																														1
TTTGTT	1																																																																																															1
TTTTAA	1																																																																																															1
TTTTAT	7	1				1																																																																																										9
TTTTCT	8	2	1																																																																																													11
TTTTGT		1																																																																																														1
TTTTTA	12	1	1																																																																																													14
TTTTTC	12	2																																																																																														14

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	42	39	34	34	34	28	22	16	24	16	9	11	8	5	9	6	10	8	4	8	5	5	5	2	3	5	2	5	4	6	3	3	3	4	1	3		1		1	1	1	1		2		4	2		1		1	1	1																			1		1			2	447
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	7	6	3	5	2	2	1	1	2			1	1				1				1						1						1							1							1			1																												47
AC/GT	-	-	-	39	17	4	3	4	4	3	3	3	2	2		2	1	2	1	2		1				1		1					1														4	1																																																101
AG/CT	-	-	-	97	53	28	26	15	11	8	4	6	2	4	2		1	3		1	2	1			1	1																																																																						266
AT/AT	-	-	-	186	54	29	32	14	8	6	4	3	1	2	1		1																																																																															341
CG/CG	-	-	-	3			1																																																																																									4
AAC/GTT	-	-	19	10	10	2	3	1		2		1																																																																																				48
AAG/CTT	-	-	57	30	11	6	6	3	2	3					1			1				1	1				1			1	4																																																																	128
AAT/ATT	-	-	71	36	11	6	2	4		5	2						1														3																																																																	141
ACC/GGT	-	-	21	6	4		2	2			1																																																																																					36
ACG/CGT	-	-	10	1		1		1			1																																																																																					14
ACT/AGT	-	-	14	5	3	2	1	1	2												1	1					1				1																																																																	32
AGC/CTG	-	-	27	13	4	4		3																																																																																								51
AGG/CCT	-	-	12	5	5	2	4	1			1	1	1						1									1																																																																				34
ATC/ATG	-	-	24	11	2	3	1	1	1	1				1							1			1																																																																								47
CCG/CGG	-	-	20	3	1	2																																																																																										26
AAAC/GTTT	-	3																																																																																														3
AAAG/CTTT	-	53	26	19	3	1	3	3	1	1				1																																																																																		111
AAAT/ATTT	-	76	16	1	1	1	2	1																																																																																								98
AACC/GGTT	-	1		1																																																																																												2
AACT/AGTT	-	2			1																																																																																											3
AAGC/CTTG	-	2																																																																																														2
AAGG/CCTT	-	5																																																																																														5
AAGT/ACTT	-	1																																																																																														1
AATC/ATTG	-	16	5	4	2																																																																																											27
AATG/ATTC	-	6	2	1																																																																																												9
AATT/AATT	-	14			1	1																																																																																										16
ACAG/CTGT	-			1		1																																																																																										2
ACAT/ATGT	-	28	11	7	2	2	1	1																																																																																								52
ACCG/CGGT	-	1																																																																																														1
ACCT/AGGT	-	2			1		1																																																																																									4
ACGC/CGTG	-						1																																																																																									1
ACTC/AGTG	-	8	1																																																																																													9
ACTG/AGTC	-	3																																																																																														3
AGAT/ATCT	-	7	3		1																																																																																											11
AGCC/CTGG	-	1																																																																																														1
AGCG/CGCT	-	1																																																																																														1
AGCT/AGCT	-	1																																																																																														1
AGGG/CCCT	-	3																																																																																														3
ATCC/ATGG	-	5	1																																																																																													6
ATGC/ATGC	-	1																																																																																														1
AAAAC/GTTTT	14	3	1																																																																																													18
AAAAG/CTTTT	199	63	14	5	1																																																																																											282
AAAAT/ATTTT	158	29	6	4		1			1									1																																																																														200
AAACC/GGTTT	5																																																																																															5
AAACG/CGTTT	2	1																																																																																														3
AAACT/AGTTT	5																																																																																															5
AAAGC/CTTTG	3	2																																																																																														5
AAAGG/CCTTT	24																																																																																															24
AAAGT/ACTTT	2																																																																																															2
AAATC/ATTTG	7		1	1																																																																																												9
AAATG/ATTTC	11	1	1																																																																																													13
AAATT/AATTT	53		1																																																																																													54
AACAC/GTGTT	3																																																																																															3
AACAT/ATGTT	1																																																																																															1
AACCC/GGGTT	9																																																																																															9
AACCG/CGGTT	3																																																																																															3
AACCT/AGGTT	3	1																																																																																														4
AACGC/CGTTG	2																																																																																															2
AACTC/AGTTG	2																																																																																															2
AACTG/AGTTC	1																																																																																															1
AAGAC/CTTGT	5	1																																																																																														6
AAGAG/CTCTT	15	1	1																																																																																													17
AAGAT/ATCTT	1																																																																																															1
AAGCC/CTTGG	1																																																																																															1
AAGCT/AGCTT	1																																																																																															1
AAGGG/CCCTT	10	1																																																																																														11
AAGTC/ACTTG	4																																																																																															4
AAGTG/ACTTC	1																																																																																															1
AATAC/ATTGT	4																																																																																															4
AATAG/ATTCT	2	1																																																																																														3
AATAT/ATATT	34																																																																																															34
AATCC/ATTGG	8																																																																																															8
AATCT/AGATT	3																																																																																															3
AATGC/ATTGC	4	2																																																																																														6
AATGG/ATTCC	2	1																																																																																														3
AATGT/ACATT	2																																																																																															2
AATTC/AATTG	5	1																																																																																														6
ACACC/GGTGT	1																																																																																															1
ACACG/CGTGT	2																																																																																															2
ACACT/AGTGT	1	1																																																																																														2
ACAGC/CTGTG	1																																																																																															1
ACAGG/CCTGT	3																																																																																															3
ACAGT/ACTGT	10																																																																																															10
ACATC/ATGTG	5																																																																																															5
ACATG/ATGTC	3	1																																																																																														4
ACCAG/CTGGT	2																																																																																															2
ACCAT/ATGGT	7																																																																																															7
ACCCC/GGGGT	2																																																																																															2
ACCCG/CGGGT	1																																																																																															1
ACCCT/AGGGT	1	1																																																																																														2
ACCGG/CCGGT	1																																																																																															1
ACCGT/ACGGT	3																																																																																															3
ACCTC/AGGTG	1																																																																																															1
ACCTG/AGGTC	1																																																																																															1
ACGAG/CGTCT	3	1																																																																																														4
ACGAT/ATCGT	1																																																																																															1
ACGCC/CGTGG	1																																																																																															1
ACGGC/CCGTG	1																																																																																															1
ACGGG/CCCGT	2		1																																																																																													3
ACTAG/AGTCT	4	1																																																																																														5
ACTAT/AGTAT	3																																																																																															3
ACTCC/AGTGG	1																																																																																															1
ACTCG/AGTCG		1																																																																																														1
ACTCT/AGAGT	1																																																																																															1
ACTGG/AGTCC		1																																																																																														1
AGAGC/CTCTG	1																																																																																															1
AGAGG/CCTCT	7		1																																																																																													8
AGATC/ATCTG		2																																																																																														2
AGATG/ATCTC	9	2	1	1																																																																																												13
AGCAT/ATGCT	2																																																																																															2
AGCCC/CTGGG	2																																																																																															2
AGCCG/CGGCT	2																																																																																															2
AGCGG/CCGCT	1																																																																																															1
AGCTC/AGCTG	7																																																																																															7
AGGAT/ATCCT	5																																																																																															5
AGGCG/CCTCG	2	1																																																																																														3
AGGGG/CCCCT	8	1																																																																																														9
ATATC/ATATG	7																																																																																															7
ATCCC/ATGGG	5	1																																																																																														6
ATCGC/ATGCG	1																																																																																															1
AAAAAC/GTTTTT	4	1																																																																																														5
AAAAAG/CTTTTT	81	18	3	1	1																																																																																											104
AAAAAT/ATTTTT	73	10	6			1																																																																																										90
AAAACC/GGTTTT	2																																																																																															2
AAAAGC/CTTTTG	3	1																																																																																														4
AAAAGG/CCTTTT	7	1																																																																																														8
AAAAGT/ACTTTT	2																																																																																															2
AAAATC/ATTTTG		1	1																																																																																													2
AAAATG/ATTTTC	7																																																																																															7
AAAATT/AATTTT	9																																																																																															9
AAACAC/GTGTTT	1																																																																																															1
AAACAG/CTGTTT		1																																																																																														1
AAACCC/GGGTTT	5	1																																																																																														6
AAACGG/CCGTTT	1																																																																																															1
AAACTG/AGTTTC	1																																																																																															1
AAAGAC/CTTTGT	2																																																																																															2
AAAGAG/CTCTTT	6	1	1																																																																																													8
AAAGAT/ATCTTT	2																																																																																															2
AAAGGG/CCCTTT	2	1	1																																																																																													4
AAAGGT/ACCTTT	1																																																																																															1
AAAGTC/ACTTTG	1																																																																																															1
AAAGTG/ACTTTC	1																																																																																															1
AAATAG/ATTTCT	2																																																																																															2
AAATAT/ATATTT	2		1																																																																																													3
AAATCC/ATTTGG	1																																																																																															1
AAATCT/AGATTT	2																																																																																															2
AAATGG/ATTTCC	1	1																																																																																														2
AAATGT/ACATTT		1																																																																																														1
AAATTG/AATTTC	1																																																																																															1
AAATTT/AAATTT	2	1																																																																																														3
AACAAG/CTTGTT	4	2																																																																																														6
AACAAT/ATTGTT	1																																																																																															1
AACACC/GGTGTT	2	1																																																																																														3
AACAGC/CTGTTG	5	1	1																																																																																													7
AACAGG/CCTGTT	3																																																																																															3
AACATC/ATGTTG	3																																																																																															3
AACATG/ATGTTC	1																																																																																															1
AACCAC/GGTTGT	4																																																																																															4
AACCAT/ATGGTT	1																																																																																															1
AACCCC/GGGGTT	4																																																																																															4
AACCCG/CGGGTT	2																																																																																															2
AACCGC/CGGTTG	1																																																																																															1
AACCTC/AGGTTG	1																																																																																															1
AACCTG/AGGTTC	1																																																																																															1
AACGAC/CGTTGT	3																																																																																															3
AACGCC/CGTTGG			1																																																																																													1
AACGTC/ACGTTG	1																																																																																															1
AACTAC/AGTTGT	2																																																																																															2
AACTAT/AGTTAT	1																																																																																															1
AACTGC/AGTTGC	1																																																																																															1
AACTTC/AAGTTG	1																																																																																															1
AAGAAT/ATTCTT	1																																																																																															1
AAGACC/CTTGGT	1																																																																																															1
AAGACG/CGTCTT	4																																																																																															4
AAGAGG/CCTCTT	9	1																																																																																														10
AAGATG/ATCTTC		1																																																																																														1
AAGCAG/CTGCTT	3																																																																																															3
AAGCCG/CGGCTT	1		1																																																																																													2
AAGCGG/CCGCTT	1																																																																																															1
AAGGAC/CCTTGT	1																																																																																															1
AAGGAG/CCTTCT	1																																																																																															1
AAGGCG/CCTTCG	1																																																																																															1
AAGGGC/CCCTTG	2																																																																																															2
AAGTAG/ACTTCT	1	1																																																																																														2
AAGTCC/ACTTGG	2																																																																																															2
AAGTGG/ACTTCC	1																																																																																															1
AATACC/ATTGGT	1																																																																																															1
AATAGT/ACTATT	2																																																																																															2
AATATT/AATATT	14																																																																																															14
AATCAC/ATTGTG	2																																																																																															2
AATCAT/ATGATT	4																																																																																															4
AATCCC/ATTGGG		1	1																																																																																													2
AATCGC/ATTGCG	1																																																																																															1
AATGAG/ATTCTC	3																																																																																															3
AATGCC/ATTGGC	2																																																																																															2
AATGGC/ATTGCC	2																																																																																															2
AATGGG/ATTCCC	1																																																																																															1
AATGGT/ACCATT	1																																																																																															1
AATGTC/ACATTG	1																																																																																															1
AATGTG/ACATTC	2																																																																																															2
AATTAC/AATTGT	1																																																																																															1
AATTAG/AATTCT	1																																																																																															1
AATTAT/AATTAT	9	1																																																																																														10
AATTCC/AATTGG	1																																																																																															1
ACACAG/CTGTGT	1																																																																																															1
ACACAT/ATGTGT	2																																																																																															2
ACACCC/GGGTGT		1																																																																																														1
ACACGC/CGTGTG	1																																																																																															1
ACAGAG/CTCTGT	1																																																																																															1
ACAGCG/CGCTGT	1																																																																																															1
ACAGGC/CCTGTG		1																																																																																														1
ACAGGG/CCCTGT	2																																																																																															2
ACAGTC/ACTGTG	1																																																																																															1
ACATAG/ATGTCT	1																																																																																															1
ACATAT/ATATGT	3																																																																																															3
ACATCT/AGATGT	1																																																																																															1
ACATGC/ATGTGC	1																																																																																															1
ACATGG/ATGTCC	2																																																																																															2
ACATGT/ACATGT	1	1																																																																																														2
ACCACG/CGTGGT	1																																																																																															1
ACCACT/AGTGGT	2							2																																																																																								4
ACCAGC/CTGGTG	2	1																																																																																														3
ACCATC/ATGGTG	4																																																																																															4
ACCATG/ATGGTC	1																																																																																															1
ACCCCC/GGGGGT	1																																																																																															1
ACCCTC/AGGGTG		1																																																																																														1
ACCCTG/AGGGTC	1																																																																																															1
ACCGAG/CGGTCT	1																																																																																															1
ACCGCC/CGGTGG	2																																																																																															2
ACCGGC/CCGGTG		1																																																																																														1
ACCGGG/CCCGGT		1																																																																																														1
ACCGTC/ACGGTG	1																																																																																															1
ACCTAT/AGGTAT	1																																																																																															1
ACCTCC/AGGTGG		1																																																																																														1
ACCTCG/AGGTCG	1																																																																																															1
ACCTGC/AGGTGC	1																																																																																															1
ACGACT/AGTCGT	1																																																																																															1
ACGAGC/CGTGCT	1																																																																																															1
ACGAGG/CCTCGT	5																																																																																															5
ACGATC/ATCGTG	2																																																																																															2
ACGATG/ATCGTC	9						1																																																																																									10
ACGCAG/CGTCTG	1																																																																																															1
ACGCGG/CCGCGT	1																																																																																															1
ACGCTC/AGCGTG	2																																																																																															2
ACGCTG/AGCGTC	2																																																																																															2
ACGGAG/CCGTCT	1																																																																																															1
ACGGCC/CCGTGG	3																																																																																															3
ACGTAG/ACGTCT		1																																																																																														1
ACTATG/AGTCAT	1																																																																																															1
ACTCAG/AGTCTG	1																																																																																															1
ACTCAT/AGTATG	1																																																																																															1
ACTCCC/AGTGGG	1																																																																																															1
ACTCCG/AGTCGG	1																																																																																															1
ACTCGC/AGTGCG	1																																																																																															1
ACTCTC/AGAGTG	1																																																																																															1
ACTGAT/AGTATC	1																																																																																															1
ACTGCC/AGTGGC	2	1																																																																																														3
ACTGCG/AGTCGC	2																																																																																															2
ACTGCT/AGCAGT	3																																																																																															3
ACTGGC/AGTGCC	1																																																																																															1
AGAGCC/CTCTGG	4																																																																																															4
AGAGCG/CGCTCT	2																																																																																															2
AGAGCT/AGCTCT	1		1																																																																																													2
AGAGGC/CCTCTG	1																																																																																															1
AGAGGG/CCCTCT	6	1	1																																																																																													8
AGATCG/ATCTCG	1																																																																																															1
AGATGC/ATCTGC	1																																																																																															1
AGCAGG/CCTGCT	2	1																																																																																														3
AGCATC/ATGCTG	3																																																																																															3
AGCCAT/ATGGCT	1																																																																																															1
AGCCCC/CTGGGG	1	1																																																																																														2
AGCCCG/CGGGCT	1	1																																																																																														2
AGCCGC/CGGCTG	6	2																																																																																														8
AGCCGG/CCGGCT	4																																																																																															4
AGCCTC/AGGCTG	1																																																																																															1
AGCCTG/AGGCTC	4		1																																																																																													5
AGCGAT/ATCGCT		1																																																																																														1
AGCGCG/CGCGCT	1																																																																																															1
AGCGGC/CCGCTG		2																																																																																														2
AGCGGG/CCCGCT	1																																																																																															1
AGCTCC/AGCTGG	5																																																																																															5
AGCTGC/AGCTGC	1																																																																																															1
AGGATC/ATCCTG	1																																																																																															1
AGGATG/ATCCTC	8	1							1																																																																																							10
AGGCGC/CCTGCG	1	1																																																																																														2
AGGCGG/CCGCCT	3																																																																																															3
AGGGAT/ATCCCT	1																																																																																															1
AGGGGG/CCCCCT	2																																																																																															2
ATATCC/ATATGG	1																																																																																															1
ATATCG/ATATCG	1																																																																																															1
ATATGC/ATATGC	1																																																																																															1
ATCCCC/ATGGGG	1																																																																																															1
ATCCCG/ATCGGG	2																																																																																															2
ATCGCC/ATGGCG	2																																																																																															2
ATCGGC/ATGCCG	2																																																																																															2
CCCGCG/CGCGGG	1																																																																																															1
CCGGCG/CCGGCG	1																																																																																															1
