Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_038048875.1/fasta/hub_GCA_038048875.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              5350
Total size of examined sequences (bp):           44983154
Total number of identified SSRs:                 8744
Number of SSR containing sequences:              2358
Number of sequences containing more than 1 SSR:  1487
Number of SSRs present in compound formation:    660


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	62
2	3127
3	2412
4	1150
5	897
6	1096

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-						1			1			2																																																																																																4
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	6	4	5		4		2																																																																			1																																		22
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	10	9	3	3	1	1	1					1		1						1																																																																																						1	36
AC	-	-	-	101	50	29	18	8	6	3	7	1	4		2			3	1					1																																																																																																					234
AG	-	-	-	175	99	65	51	27	22	19	19	13	12	12	6	6	5	4	3	2		1	2	2				2																																																																																																	547
AT	-	-	-	14	10	5	7	7	4		2	1	2	1		2					1																																																																																																								56
CA	-	-	-	165	62	48	19	16	9	4	3	1	1	5	3			2				1	2		2																																																																																																				343
CG	-	-	-	28	3	1																																																																																																																							32
CT	-	-	-	145	73	64	41	24	21	16	16	8	8	5	9	2	1	2	3					1		1																																																																																																			440
GA	-	-	-	136	85	43	22	15	16	11	8	7	8	4	1	1	2			1	2	1							1																																																																																																364
GC	-	-	-	37	1	3																																																																																																																							41
GT	-	-	-	92	58	23	23	8	6	5	5	3		2		1			2	1	1		1																																																																																																						231
TA	-	-	-	14	9	3	5	4	1			3	1		1																																																																																																														41
TC	-	-	-	148	71	57	25	27	17	19	9	9	8	7	6	6	4	3		1	2		1	3	2																																																																																																				425
TG	-	-	-	170	72	44	18	21	14	10	3	6	5	3		1	1	1		1	1		2																																																																																																						373
AAC	-	-	14	13	3	1																																																																																																																							31
AAG	-	-	35	18	4	1	3		1																																																																																																																				62
AAT	-	-	1																																																																																																																										1
ACA	-	-	32	15	2	2	2		1				1																																																																																																																55
ACC	-	-	10	10	2	1	1																																																																																																																						24
ACG	-	-	11	3	4			1																																																																																																																					19
ACT	-	-	5																																																																																																																										5
AGA	-	-	24	12	1	2		2			1																																																																																																																		42
AGC	-	-	89	24	13	2	1																																																																																																																						129
AGG	-	-	9	2																																																																																																																									11
AGT	-	-	3																																																																																																																										3
ATA	-	-	1																																																																																																																										1
ATC	-	-	11	2	1				1																																																																																																																				15
ATG	-	-	4		1				1																																																																																																																				6
ATT	-	-	1																																																																																																																										1
CAA	-	-	43	11	4	3	1	3																																																																																																																					65
CAC	-	-	25	8	1	2																																																																																																																							36
CAG	-	-	161	43	17	12	2	1																																																																																																																					236
CAT	-	-	18	7	3	1																																																																																																																							29
CCA	-	-	30	10	3	1		1																																																																																																																					45
CCG	-	-	10	4	3																																																																																																																								17
CCT	-	-	10	2	4																																																																																																																								16
CGA	-	-	23	10	6	3																																																																																																																							42
CGC	-	-	15	2	3																																																																																																																								20
CGG	-	-	9	3				1																																																																																																																					13
CGT	-	-	28	6	4	2																																																																																																																							40
CTA	-	-	4																																																																																																																										4
CTC	-	-	7	4	2	1					1																																																																																																																		15
CTG	-	-	120	36	10	3	1	1	1			1																																																																																																																	173
CTT	-	-	34	7	5	4		1		1																																																																																																																			52
GAA	-	-	27	6	3	4	3	3																																																																																																																					46
GAC	-	-	48	9	6	1	1					1																																																																																																																	66
GAG	-	-	11	4		2		1																																																																																																																					18
GAT	-	-	17	7	1	1	1		1																																																																																																																				28
GCA	-	-	64	21	6	1	2		1																																																																																																																				95
GCC	-	-	11	4	1																																																																																																																								16
GCG	-	-	15	5			2						1																																																																																																																23
GCT	-	-	99	37	8	6	2		1																																																																																																																				153
GGA	-	-	4	2	1																																																																																																																								7
GGC	-	-	8	3	1	1																																																																																																																							13
GGT	-	-	27	5	1		1		1	1																																																																																																																			36
GTA	-	-	4			2																																																																																																																							6
GTC	-	-	28	4	1																																																																																																																								33
GTG	-	-	26	4	3	3																																																																																																																							36
GTT	-	-	19	6	2	1				1																																																																																																																			29
TAA	-	-					1																																																																																																																						1
TAC	-	-	1	3	1																																																																																																																								5
TAG	-	-	1		2																																																																																																																								3
TCA	-	-	19	9	4																																																																																																																								32
TCC	-	-	9	2	2	1	1	1																																																																																																																					16
TCG	-	-	34	15	4	3	3																																																																																																																						59
TCT	-	-	37	12	7		1	1	1																																																																																																																				59
TGA	-	-	15	9	2	2																																																																																																																							28
TGC	-	-	113	31	12	7	4	2	1																																																																																																																				170
TGG	-	-	33	9	2	4	1				1																																																																																																																		50
TGT	-	-	38	18	9	6	4	3		1			1																																																																																																																80
TTA	-	-		2																																																																																																																									2
TTC	-	-	31	10	5		2																																																																																																																						48
TTG	-	-	27	10	8								1																																																																																																																46
AAAC	-		1																																																																																																																										1
AACA	-	4																																																																																																																											4
AACC	-	1	1																																																																																																																										2
AACG	-	2	1																																																																																																																										3
AAGA	-	3																																																																																																																											3
AAGC	-	4																																																																																																																											4
AAGG	-	4	1																																																																																																																										5
AATC	-	2	1																																																																																																																										3
AATG	-	3				1																																																																																																																							4
ACAA	-	3		2																																																																																																																									5
ACAG	-	5	3																																																																																																																										8
ACAT	-	6	2																																																																																																																										8
ACCA	-	4					1																																																																																																																						5
ACCC	-	1		1																																																																																																																									2
ACCT	-	2																																																																																																																											2
ACGA	-	2																																																																																																																											2
ACGC	-	4																																																																																																																											4
ACGG	-	5	1		1																																																																																																																								7
ACGT	-	1																																																																																																																											1
ACTC	-	4	4																																																																																																																										8
ACTG	-	5	2	1																																																																																																																									8
AGAA	-	4	1																																																																																																																										5
AGAC	-	8		1																																																																																																																									9
AGAT	-	6	1					1																																																																																																																					8
AGCA	-	6																																																																																																																											6
AGCC	-	2	1																																																																																																																										3
AGCG	-	9	1		1																																																																																																																								11
AGGA	-	8	3																																																																																																																										11
AGGC	-	5																																																																																																																											5
AGGG	-				1																																																																																																																								1
AGGT	-	2	1																																																																																																																										3
AGTC	-	3	2																																																																																																																										5
AGTG	-	9	2		2																																																																																																																								13
AGTT	-	1																																																																																																																											1
ATAC	-	3																																																																																																																											3
ATAG	-		2		1																																																																																																																								3
ATCA	-	9	5	1																																																																																																																									15
ATCC	-	11	5	2																																																																																																																									18
ATCG	-	4																																																																																																																											4
ATCT	-	3	1		1																																																																																																																								5
ATGA	-	10	2																																																																																																																										12
ATGC	-	3																																																																																																																											3
ATGG	-	14	2		1	1					1																																																																																																																		19
ATGT	-	1																																																																																																																											1
ATTC	-	3																																																																																																																											3
ATTG	-	8																																																																																																																											8
CAAA	-	4	2																																																																																																																										6
CAAC	-	6																																																																																																																											6
CAAG	-	3																																																																																																																											3
CAAT	-	11		2																																																																																																																									13
CACC	-	2	2																																																																																																																										4
CACG	-	4	1																																																																																																																										5
CACT	-	10	1																																																																																																																										11
CAGA	-	8			1																																																																																																																								9
CAGC	-	6	4		1																																																																																																																								11
CAGG	-	2	2																																																																																																																										4
CAGT	-	10	3	1			1																																																																																																																						15
CATA	-	3																																																																																																																											3
CATC	-	9	1	3		1																																																																																																																							14
CATG	-	5																																																																																																																											5
CATT	-	10																																																																																																																											10
CCAA	-	1	1																																																																																																																										2
CCAC	-	2	1																																																																																																																										3
CCAG	-	7	3		2																																																																																																																								12
CCAT	-	16	3																																																																																																																										19
CCGA	-	2																																																																																																																											2
CCGC	-	2																																																																																																																											2
CCGG	-	1																																																																																																																											1
CCGT	-	2																																																																																																																											2
CCTA	-	2																																																																																																																											2
CCTC	-	1		1																																																																																																																									2
CCTG	-	1																																																																																																																											1
CCTT	-	4	1																																																																																																																										5
CGAA	-	3		1																																																																																																																									4
CGAG	-	10	3	1																																																																																																																									14
CGAT	-	5	1																																																																																																																										6
CGCA	-	6																																																																																																																											6
CGCC	-	1																																																																																																																											1
CGCT	-	9	2	1																																																																																																																									12
CGGA	-	8	1	1																																																																																																																									10
CGGG	-	1																																																																																																																											1
CGGT	-	1																																																																																																																											1
CGTC	-	5		1																																																																																																																									6
CGTG	-	3																																																																																																																											3
CGTT	-	3																																																																																																																											3
CTAC	-		1																																																																																																																										1
CTAG	-	1																																																																																																																											1
CTAT	-	1	2																																																																																																																										3
CTCA	-	7	3	1			1				1																																																																																																																		13
CTCC	-	3																																																																																																																											3
CTCG	-	12	2		1																																																																																																																								15
CTGA	-	9	3						1																																																																																																																				13
CTGC	-	4	1																																																																																																																										5
CTGG	-	2		1																																																																																																																									3
CTGT	-	5	3		1																																																																																																																								9
CTTA	-	1																																																																																																																											1
CTTC	-	7	1																																																																																																																										8
CTTG	-	1																																																																																																																											1
CTTT	-	3																																																																																																																											3
GAAA	-	3																																																																																																																											3
GAAC	-	4	1																																																																																																																										5
GAAG	-	7	1																																																																																																																										8
GAAT	-	6	1				1																																																																																																																						8
GACA	-	5	2	3																																																																																																																									10
GACG	-	5	2	1																																																																																																																									8
GACT	-	17	4																																																																																																																										21
GAGC	-	13	1																																																																																																																										14
GAGG	-	1																																																																																																																											1
GAGT	-	3	2																																																																																																																										5
GATA	-	6																																																																																																																											6
GATC	-	7	2																																																																																																																										9
GATG	-	11	3		1			1					1																																																																																																																17
GATT	-	5																																																																																																																											5
GCAA	-	7																																																																																																																											7
GCAC	-	3	2																																																																																																																										5
GCAG	-	4																																																																																																																											4
GCAT	-	4																																																																																																																											4
GCCA	-	4	1	1																																																																																																																									6
GCCC	-	2	1																																																																																																																										3
GCCT	-	4																																																																																																																											4
GCGA	-	9	2																																																																																																																										11
GCGG	-	2																																																																																																																											2
GCGT	-	6																																																																																																																											6
GCTC	-	9	4																																																																																																																										13
GCTG	-	4		1																																																																																																																									5
GCTT	-	4																																																																																																																											4
GGAA	-	3	2																																																																																																																										5
GGAC	-	9	1																																																																																																																										10
GGAG	-	6																																																																																																																											6
GGAT	-	8	3	2																																																																																																																									13
GGCA	-	3																																																																																																																											3
GGCG	-	2		1																																																																																																																									3
GGCT	-	3			1																																																																																																																								4
GGGA	-	3																																																																																																																											3
GGGC	-	2				1																																																																																																																							3
GGTA	-	1	1																																																																																																																										2
GGTG	-	2																																																																																																																											2
GGTT	-	3	1	1																																																																																																																									5
GTAT	-	2	1																																																																																																																										3
GTCA	-	9	3																																																																																																																										12
GTCC	-	2		1																																																																																																																									3
GTCG	-	1																																																																																																																											1
GTCT	-	8	1																																																																																																																										9
GTGA	-	4	2																																																																																																																										6
GTGC	-	6																																																																																																																											6
GTGG	-	1																																																																																																																											1
GTTA	-	3																																																																																																																											3
GTTC	-	3		1																																																																																																																									4
GTTG	-	3	1																																																																																																																										4
GTTT	-	4			1																																																																																																																								5
TAAC	-	2																																																																																																																											2
TACC	-	4																																																																																																																											4
TACT	-	1																																																																																																																											1
TAGA	-	6	2		1	1																																																																																																																							10
TAGG	-	1																																																																																																																											1
TATC	-	2	1		1																																																																																																																								4
TATG	-	1																																																																																																																											1
TATT	-	2																																																																																																																											2
TCAA	-	5		3	1																																																																																																																								9
TCAC	-	3	1																																																																																																																										4
TCAG	-	7	3			1																																																																																																																							11
TCAT	-	4	2	1																																																																																																																									7
TCCA	-	7	3																																																																																																																										10
TCCC	-	1																																																																																																																											1
TCCG	-	2	2																																																																																																																										4
TCCT	-	2	2				1																																																																																																																						5
TCGA	-	1																																																																																																																											1
TCGC	-	11																																																																																																																											11
TCGT	-	2																																																																																																																											2
TCTA	-	11			1	1			1																																																																																																																				14
TCTG	-	6	4																																																																																																																										10
TCTT	-	2		1																																																																																																																									3
TGAA	-	5																																																																																																																											5
TGAC	-	7	2		1	1																																																																																																																							11
TGAG	-	2	1	2																																																																																																																									5
TGAT	-	8	2																																																																																																																										10
TGCA	-	3	1																																																																																																																										4
TGCC	-	3	1																																																																																																																										4
TGCG	-	2																																																																																																																											2
TGCT	-	7																																																																																																																											7
TGGA	-	7	4		1																																																																																																																								12
TGGC	-	4																																																																																																																											4
TGGT	-	5	2																																																																																																																										7
TGTA	-	4																																																																																																																											4
TGTC	-	9	2	1																																																																																																																									12
TGTT	-	4	3	1																																																																																																																									8
TTAT	-	1																																																																																																																											1
TTCA	-	3																																																																																																																											3
TTCC	-	1	1																																																																																																																										2
TTCG	-	3																																																																																																																											3
TTCT	-		1																																																																																																																										1
TTGA	-	4	2																																																																																																																										6
TTGC	-	7																																																																																																																											7
TTGG	-	3	1																																																																																																																										4
TTGT	-	8																																																																																																																											8
TTTC	-	2																																																																																																																											2
TTTG	-	7	1	1																																																																																																																									9
AAAAC	1																																																																																																																												1
AAAAT	1																																																																																																																												1
AAACA	4	1																																																																																																																											5
AAACC	2	1																																																																																																																											3
AAACG	2																																																																																																																												2
AAAGA	2																																																																																																																												2
AAAGC	4																																																																																																																												4
AAAGG	1																																																																																																																												1
AAATG		1																																																																																																																											1
AACAA	4																																																																																																																												4
AACCA	3																																																																																																																												3
AACCC	1																																																																																																																												1
AACGA	1																																																																																																																												1
AACGC	2																																																																																																																												2
AACTA	2																																																																																																																												2
AAGAC	1																																																																																																																												1
AAGAG	3																																																																																																																												3
AAGCA	7																																																																																																																												7
AAGCC	2																																																																																																																												2
AAGCG	1																																																																																																																												1
AAGGC	1																																																																																																																												1
AAGGG	1	1																																																																																																																											2
AAGTA	1																																																																																																																												1
AATAG	3																																																																																																																												3
AATCA	1																																																																																																																												1
AATCC	1																																																																																																																												1
AATCG	1																																																																																																																												1
AATGA	1																																																																																																																												1
AATGC	2																																																																																																																												2
AATGG	1																																																																																																																												1
ACAAA	1																																																																																																																												1
ACAAC	1																																																																																																																												1
ACAAG	2																																																																																																																												2
ACACA	4																																																																																																																												4
ACACC	2																																																																																																																												2
ACACG	2																																																																																																																												2
ACAGA	2																																																																																																																												2
ACAGC	4																																																																																																																												4
ACAGG	1																																																																																																																												1
ACAGT	1																																																																																																																												1
ACATC	1																																																																																																																												1
ACCAA	1																																																																																																																												1
ACCAG	1																																																																																																																												1
ACCGG	1																																																																																																																												1
ACCGT	1																																																																																																																												1
ACCTC	2																																																																																																																												2
ACGAC	2	1																																																																																																																											3
ACGCA	1																																																																																																																												1
ACGCC	4																																																																																																																												4
ACTAA	1																																																																																																																												1
ACTAC	1																																																																																																																												1
ACTCA	3																																																																																																																												3
ACTCG		1																																																																																																																											1
ACTTC	1																																																																																																																												1
ACTTG	1																																																																																																																												1
AGAAA	3																																																																																																																												3
AGACG	2																																																																																																																												2
AGAGA	2	1																																																																																																																											3
AGAGC	2																																																																																																																												2
AGAGG	4																																																																																																																												4
AGAGT	1																																																																																																																												1
AGCAA	5																																																																																																																												5
AGCAC	2																																																																																																																												2
AGCAG	7	1																																																																																																																											8
AGCCA	3																																																																																																																												3
AGCCC	3																																																																																																																												3
AGCCG	1																																																																																																																												1
AGCGA	2																																																																																																																												2
AGCGC	1																																																																																																																												1
AGCGT	1																																																																																																																												1
AGCTC	3																																																																																																																												3
AGCTG	1	1																																																																																																																											2
AGGCA	4																																																																																																																												4
AGGGA	1																																																																																																																												1
AGGGG	1																																																																																																																												1
AGGTC							1																																																																																																																						1
AGTAG	1																																																																																																																												1
AGTCA	1																																																																																																																												1
AGTCG	2																																																																																																																												2
AGTGA	2																																																																																																																												2
AGTGC	1																																																																																																																												1
ATAAA	1																																																																																																																												1
ATACA	1																																																																																																																												1
ATACT	1																																																																																																																												1
ATAGG	1																																																																																																																												1
ATCAC	1																																																																																																																												1
ATCGA	1	1																																																																																																																											2
ATCGC	1																																																																																																																												1
ATCGG	2			1																																																																																																																									3
ATCTG	1																																																																																																																												1
ATGAA	1																																																																																																																												1
ATGAG	1																																																																																																																												1
ATGCA	1																																																																																																																												1
ATGCG	1	1																																																																																																																											2
ATGGA	1																																																																																																																												1
ATTCG	3																																																																																																																												3
ATTGC	1																																																																																																																												1
ATTGG	1																																																																																																																												1
CAAAA	8	1																																																																																																																											9
CAAAC	1																																																																																																																												1
CAAAG	4																																																																																																																												4
CAAAT	3	1																																																																																																																											4
CAACA	2																																																																																																																												2
CAACG	1																																																																																																																												1
CAACT	4																																																																																																																												4
CAAGA	2																																																																																																																												2
CAAGC	3																																																																																																																												3
CAAGT	2																																																																																																																												2
CAATA	1																																																																																																																												1
CAATC			1																																																																																																																										1
CAATG	1																																																																																																																												1
CAATT	1																																																																																																																												1
CACAA	4	1																																																																																																																											5
CACAC	5	1																																																																																																																											6
CACAG	3																																																																																																																												3
CACAT	1		1																																																																																																																										2
CACGA	3																																																																																																																												3
CACGC	1																																																																																																																												1
CACGT	1																																																																																																																												1
CACTC	2																																																																																																																												2
CACTG	1			1																																																																																																																									2
CACTT	3																																																																																																																												3
CAGAA	1																																																																																																																												1
CAGAC	1																																																																																																																												1
CAGAG	3																																																																																																																												3
CAGCA	3																																																																																																																												3
CAGCC	2																																																																																																																												2
CAGCT	10		1	1																																																																																																																									12
CAGGA	5																																																																																																																												5
CAGTA	1																																																																																																																												1
CAGTC	1																																																																																																																												1
CAGTG	1																																																																																																																												1
CATAC	2																																																																																																																												2
CATCA	3																																																																																																																												3
CATCG	3																																																																																																																												3
CATGA	1																																																																																																																												1
CATGC	1																																																																																																																												1
CATGT	1																																																																																																																												1
CATTC	3	1																																																																																																																											4
CATTG	2																																																																																																																												2
CATTT	4																																																																																																																												4
CCAAA	4			1																																																																																																																									5
CCAAG	1																																																																																																																												1
CCAAT	1																																																																																																																												1
CCACC	2																																																																																																																												2
CCACG		1																																																																																																																											1
CCACT	1																																																																																																																												1
CCAGC	1																																																																																																																												1
CCAGT	1																																																																																																																												1
CCATC	2																																																																																																																												2
CCATG	3																																																																																																																												3
CCATT	2																																																																																																																												2
CCCAA		1																																																																																																																											1
CCCAC	1																																																																																																																												1
CCCAG	1																																																																																																																												1
CCCGC	1																																																																																																																												1
CCGAC	1																																																																																																																												1
CCGAG	2																																																																																																																												2
CCGAT	1																																																																																																																												1
CCTCA	2																																																																																																																												2
CCTCG	2	1																																																																																																																											3
CCTGT	1					1																																																																																																																							2
CCTTC	1																																																																																																																												1
CCTTG		1																																																																																																																											1
CCTTT	1																																																																																																																												1
CGAAG	2																																																																																																																												2
CGAAT	2	2																																																																																																																											4
CGACA	1																																																																																																																												1
CGACC	1																																																																																																																												1
CGACT	2																																																																																																																												2
CGAGA	1																																																																																																																												1
CGAGC	1	1																																																																																																																											2
CGAGG	1																																																																																																																												1
CGAGT	2	2																																																																																																																											4
CGATC	1																																																																																																																												1
CGATG	3																																																																																																																												3
CGATT	1																																																																																																																												1
CGCAC	1																																																																																																																												1
CGCAT	2																																																																																																																												2
CGCCA	2																																																																																																																												2
CGCCC	1																																																																																																																												1
CGCCG	3																																																																																																																												3
CGCCT			1																																																																																																																										1
CGCGG	2																																																																																																																												2
CGCGT	2																																																																																																																												2
CGCTC	1																																																																																																																												1
CGCTG	1																																																																																																																												1
CGCTT	1																																																																																																																												1
CGGCT	1																																																																																																																												1
CGGGT	1																																																																																																																												1
CGTCC	1																																																																																																																												1
CGTCG	1																																																																																																																												1
CGTCT	1																																																																																																																												1
CGTGA		1																																																																																																																											1
CGTGG	2																																																																																																																												2
CGTTG	1																																																																																																																												1
CTAGC	1																																																																																																																												1
CTAGT	1																																																																																																																												1
CTATT	1																																																																																																																												1
CTCAA	1																																																																																																																												1
CTCAC	3	1																																																																																																																											4
CTCAG	3	1																																																																																																																											4
CTCCA	1																																																																																																																												1
CTCCG	2																																																																																																																												2
CTCCT	2																																																																																																																												2
CTCGA	3																																																																																																																												3
CTCGC		1																																																																																																																											1
CTCGT	1	1																																																																																																																											2
CTCTC	1																																																																																																																												1
CTCTG	3																																																																																																																												3
CTCTT	3																																																																																																																												3
CTGAA	1																																																																																																																												1
CTGAC	3																																																																																																																												3
CTGAG	5	1																																																																																																																											6
CTGAT	1																																																																																																																												1
CTGCA	1																																																																																																																												1
CTGCG	1																																																																																																																												1
CTGCT	9																																																																																																																												9
CTGGA	2																																																																																																																												2
CTGGT	2																																																																																																																												2
CTGTA		1																																																																																																																											1
CTGTC	1																																																																																																																												1
CTGTG	4		1																																																																																																																										5
CTGTT	1																																																																																																																												1
CTTCA			1																																																																																																																										1
CTTCT	1																																																																																																																												1
CTTGA	1																																																																																																																												1
CTTGC	3	1																																																																																																																											4
CTTGT	1																																																																																																																												1
CTTTC	2																																																																																																																												2
CTTTG	3																																																																																																																												3
CTTTT	1																																																																																																																												1
GAAAA	2																																																																																																																												2
GAAAT	1																																																																																																																												1
GAAGA	3																																																																																																																												3
GAAGG	2																																																																																																																												2
GAAGT	1																																																																																																																												1
GAATC	3																																																																																																																												3
GAATG	1																																																																																																																												1
GACAT	1																																																																																																																												1
GACCA	1																																																																																																																												1
GACGA	2																																																																																																																												2
GACGC	1																																																																																																																												1
GACTA	1																																																																																																																												1
GAGAA	4																																																																																																																												4
GAGAC	1																																																																																																																												1
GAGAG	1																																																																																																																												1
GAGAT	2																																																																																																																												2
GAGCA	1																																																																																																																												1
GAGCT	4	1																																																																																																																											5
GAGGC	2																																																																																																																												2
GAGGG	1																																																																																																																												1
GAGGT	2																																																																																																																												2
GAGTC	1																																																																																																																												1
GAGTT	2	1																																																																																																																											3
GATCC		1																																																																																																																											1
GATCT	1																																																																																																																												1
GATGA	2																																																																																																																												2
GATGC	1																																																																																																																												1
GATGG	1																																																																																																																												1
GATGT											1																																																																																																																		1
GATTA	1																																																																																																																												1
GATTC	1																																																																																																																												1
GATTT	2																																																																																																																												2
GCAAA	2																																																																																																																												2
GCAAC	3	1																																																																																																																											4
GCAAG	1																																																																																																																												1
GCAAT	1	1																																																																																																																											2
GCACA	1																																																																																																																												1
GCACT	1																																																																																																																												1
GCAGC	2																																																																																																																												2
GCAGT	1																																																																																																																												1
GCATC	1																																																																																																																												1
GCATG	3																																																																																																																												3
GCATT	3	1																																																																																																																											4
GCCAA	2																																																																																																																												2
GCCAC	2																																																																																																																												2
GCCAG	1																																																																																																																												1
GCCGC	1																																																																																																																												1
GCGAA	1																																																																																																																												1
GCGAC	2																																																																																																																												2
GCGAG	1																																																																																																																												1
GCGAT	4	1																																																																																																																											5
GCGCA	2																																																																																																																												2
GCGCT	1																																																																																																																												1
GCGGC		1																																																																																																																											1
GCGTC	1																																																																																																																												1
GCGTG	1																																																																																																																												1
GCGTT	1																																																																																																																												1
GCTAG	1																																																																																																																												1
GCTCA	2	1																																																																																																																											3
GCTCT	6																																																																																																																												6
GCTGA	8																																																																																																																												8
GCTGC	3																																																																																																																												3
GCTGT	2																																																																																																																												2
GCTTC	1																																																																																																																												1
GCTTG	1	1																																																																																																																											2
GCTTT	4																																																																																																																												4
GGAAG	1																																																																																																																												1
GGACT	1																																																																																																																												1
GGATG	2																																																																																																																												2
GGCGA	1																																																																																																																												1
GGCGC	1																																																																																																																												1
GGCGG	1																																																																																																																												1
GGCGT	1																																																																																																																												1
GGCTC	2	2																																																																																																																											4
GGGAG	1																																																																																																																												1
GGGAT	1																																																																																																																												1
GGGCG		1																																																																																																																											1
GGGCT											1																																																																																																																		1
GGGGA	1																																																																																																																												1
GGGGC	3																																																																																																																												3
GGGGT	1																																																																																																																												1
GGGTT	1																																																																																																																												1
GGTCG	1																																																																																																																												1
GGTCT	2																																																																																																																												2
GGTGG	1																																																																																																																												1
GTACC	1																																																																																																																												1
GTACT	1																																																																																																																												1
GTAGA			1																																																																																																																										1
GTATA	1																																																																																																																												1
GTATG		1																																																																																																																											1
GTATT	1																																																																																																																												1
GTCAC	1																																																																																																																												1
GTCGA	2																																																																																																																												2
GTCGC	1																																																																																																																												1
GTCGT			1																																																																																																																										1
GTCTC	2																																																																																																																												2
GTGAA							1																																																																																																																						1
GTGAG	2																																																																																																																												2
GTGAT	2																																																																																																																												2
GTGCA	1																																																																																																																												1
GTGCT	1																																																																																																																												1
GTGGC	3																																																																																																																												3
GTGGT								1																																																																																																																					1
GTGTC	1	1																																																																																																																											2
GTGTG	4																																																																																																																												4
GTGTT	1		1																																																																																																																										2
GTTAG	1																																																																																																																												1
GTTCA	1																																																																																																																												1
GTTGA	2																																																																																																																												2
GTTGG	2																																																																																																																												2
GTTGT	4																																																																																																																												4
GTTTA		1																																																																																																																											1
GTTTG		1																																																																																																																											1
GTTTT	2	1																																																																																																																											3
TAAAA	1																																																																																																																												1
TACAA	1																																																																																																																												1
TACTC	1																																																																																																																												1
TACTG	2																																																																																																																												2
TAGCT	2																																																																																																																												2
TAGTT	1																																																																																																																												1
TATAC	2	1																																																																																																																											3
TATAT	2																																																																																																																												2
TATCA		1																																																																																																																											1
TATCC	1																																																																																																																												1
TATGA	1																																																																																																																												1
TATGC	1																																																																																																																												1
TATGG	1																																																																																																																												1
TATTT	1																																																																																																																												1
TCAAC	1	1																																																																																																																											2
TCAAT	2																																																																																																																												2
TCACA	1	1																																																																																																																											2
TCACT	2																																																																																																																												2
TCAGC	2	1																																																																																																																											3
TCAGT	3																																																																																																																												3
TCATT	1																																																																																																																												1
TCCAA	1																																																																																																																												1
TCCAC	1																																																																																																																												1
TCCAT	1																																																																																																																												1
TCCCT	3																																																																																																																												3
TCCTC	1																																																																																																																												1
TCCTG	2																																																																																																																												2
TCGAA			1																																																																																																																										1
TCGAC	1																																																																																																																												1
TCGAG		1																																																																																																																											1
TCGAT	2																																																																																																																												2
TCGCA	1																																																																																																																												1
TCGCG	1																																																																																																																												1
TCGCT	1																																																																																																																												1
TCGGA	1																																																																																																																												1
TCGGC	2																																																																																																																												2
TCGGT	1																																																																																																																												1
TCGTG	2																																																																																																																												2
TCTAG	1																																																																																																																												1
TCTAT	1																																																																																																																												1
TCTCA	1	1																																																																																																																											2
TCTCC	1																																																																																																																												1
TCTCG	3																																																																																																																												3
TCTCT	3	3																																																																																																																											6
TCTGA	2																																																																																																																												2
TCTGC	3	1																																																																																																																											4
TCTGG	1																																																																																																																												1
TCTGT	2																																																																																																																												2
TCTTC	2																																																																																																																												2
TCTTG	1																																																																																																																												1
TCTTT	2																																																																																																																												2
TGAAA	3																																																																																																																												3
TGAAC	2																																																																																																																												2
TGACG	1																																																																																																																												1
TGAGA	2																																																																																																																												2
TGAGC	4																																																																																																																												4
TGAGG	4																																																																																																																												4
TGATC		1																																																																																																																											1
TGATG	1																																																																																																																												1
TGCAA	2																																																																																																																												2
TGCAC	2																																																																																																																												2
TGCAG	1																																																																																																																												1
TGCAT	2																																																																																																																												2
TGCGA	1																																																																																																																												1
TGCGC	2																																																																																																																												2
TGCGT	2																																																																																																																												2
TGCTC	3																																																																																																																												3
TGCTG	2	1																																																																																																																											3
TGCTT	2																																																																																																																												2
TGGAC	1																																																																																																																												1
TGGAG			1																																																																																																																										1
TGGAT	2																																																																																																																												2
TGGCT	1																																																																																																																												1
TGGGC	1																																																																																																																												1
TGGGT	1																																																																																																																												1
TGGTC	2																																																																																																																												2
TGGTG		1																																																																																																																											1
TGTAC	1																																																																																																																												1
TGTAG	2																																																																																																																												2
TGTAT	1																																																																																																																												1
TGTCA	1																																																																																																																												1
TGTCC	1																																																																																																																												1
TGTCG	1																																																																																																																												1
TGTGA	2																																																																																																																												2
TGTGC	4																																																																																																																												4
TGTGG	2																																																																																																																												2
TGTGT	7																																																																																																																												7
TGTTG	2																																																																																																																												2
TGTTT	1																																																																																																																												1
TTAGC	1																																																																																																																												1
TTATA	1																																																																																																																												1
TTCAA	2																																																																																																																												2
TTCAC	1																																																																																																																												1
TTCAT	3																																																																																																																												3
TTCCA	2																																																																																																																												2
TTCCT	2																																																																																																																												2
TTCGA	1																																																																																																																												1
TTCTA	1																																																																																																																												1
TTCTC	1																																																																																																																												1
TTGAA	3																																																																																																																												3
TTGAC	2																																																																																																																												2
TTGAT	4																																																																																																																												4
TTGCA	3																																																																																																																												3
TTGCG	2																																																																																																																												2
TTGCT	8																																																																																																																												8
TTGGC	2	1																																																																																																																											3
TTGTC	1																																																																																																																												1
TTGTG	2	1																																																																																																																											3
TTGTT	3	1																																																																																																																											4
TTTCG	2																																																																																																																												2
TTTGA	4																																																																																																																												4
TTTGC	5																																																																																																																												5
TTTGT	8																																																																																																																												8
TTTTC	1																																																																																																																												1
TTTTG	4																																																																																																																												4
AAAACA	1																																																																																																																												1
AAAATG	1																																																																																																																												1
AAACAA			1																																																																																																																										1
AAAGAA	1																																																																																																																												1
AAAGAC	1																																																																																																																												1
AAAGCG	2																																																																																																																												2
AACAAG	4									1																																																																																																																			5
AACACG			1																																																																																																																										1
AACAGC			1		1																																																																																																																								2
AACAGG	2																																																																																																																												2
AACATG	1																																																																																																																												1
AACCAA	1																																																																																																																												1
AACGAA	2																																																																																																																												2
AACGCC	2																																																																																																																												2
AACTCG	1																																																																																																																												1
AAGAAA	2																																																																																																																												2
AAGAAC	1						1											1																																																																																																											3
AAGAGA	1	1																																																																																																																											2
AAGCAA	2																																																																																																																												2
AAGCAG	1				1																																																																																																																								2
AAGCCA	1																																																																																																																												1
AAGCGA	1																																																																																																																												1
AAGCGC	1																																																																																																																												1
AAGCTC	1																																																																																																																												1
AAGCTG	1																																																																																																																												1
AAGGTC	1																																																																																																																												1
AAGTGA	1																																																																																																																												1
AATATC	1																																																																																																																												1
AATCAA	1																																																																																																																												1
AATCCG	1																																																																																																																												1
AATGCG		1																																																																																																																											1
AATGGC	1																																																																																																																												1
ACAACC	1																																																																																																																												1
ACAACG			1																																																																																																																										1
ACAAGA	1																																																																																																																												1
ACACAG	1																																																																																																																												1
ACACCA		1																																																																																																																											1
ACACCG		1																																																																																																																											1
ACAGCA	6	3																																																																																																																											9
ACATAC	1																																																																																																																												1
ACATTC	1																																																																																																																												1
ACCAGA	1																																																																																																																												1
ACCAGC	1																																																																																																																												1
ACCATT	1																																																																																																																												1
ACCGCT	1																																																																																																																												1
ACCGGC	1																																																																																																																												1
ACCTGA		1																																																																																																																											1
ACGAGA	2																																																																																																																												2
ACGAGG		1																																																																																																																											1
ACGATG	2																																																																																																																												2
ACGCAC	2																																																																																																																												2
ACGCCA	1	1		1																																																																																																																									3
ACGCCC	1																																																																																																																												1
ACGCGA	1																																																																																																																												1
ACGCTC	1																																																																																																																												1
ACGCTG																		1																																																																																																											1
ACGTGG	1																																																																																																																												1
ACTCCA			1																																																																																																																										1
ACTCCT	1																																																																																																																												1
ACTCGC			1																																																																																																																										1
ACTCGG	1																																																																																																																												1
ACTCTG	1																																																																																																																												1
ACTGCG	1																																																																																																																												1
ACTGCT		3																																																																																																																											3
ACTGTG	1																																																																																																																												1
AGAACA	1									1																																																																																																																			2
AGAACC	1																																																																																																																												1
AGAACG			1																																																																																																																										1
AGAAGC	4																																																																																																																												4
AGAAGG	1																																																																																																																												1
AGAATG	1																																																																																																																												1
AGACGA		2																																																																																																																											2
AGAGAA	1	1																																																																																																																											2
AGAGAC	1																																																																																																																												1
AGAGCA	1		1																																																																																																																										2
AGAGCG	2	1																																																																																																																											3
AGAGGA	2																																																																																																																												2
AGAGGC		1																																																																																																																											1
AGATCG	1																																																																																																																												1
AGATGC	1																																																																																																																												1
AGATTC	1																																																																																																																												1
AGCAAC	3	3																																																																																																																											6
AGCAAG	3					1																																																																																																																							4
AGCACG	2																																																																																																																												2
AGCAGA	2																1																																																																																																												3
AGCAGG	2		1	1																																																																																																																									4
AGCAGT	1																																																																																																																												1
AGCCCA	1																																																																																																																												1
AGCCGC	1																																																																																																																												1
AGCCGG	1																																																																																																																												1
AGCCTG	1																																																																																																																												1
AGCGAC		1																																																																																																																											1
AGCGAG	1																																																																																																																												1
AGCGGC	1																																																																																																																												1
AGCTGG	1																																																																																																																												1
AGCTTC	2																																																																																																																												2
AGCTTG	1																																																																																																																												1
AGGAAC						1																																																																																																																							1
AGGAGC	1																																																																																																																												1
AGGCCG	2																																																																																																																												2
AGGTGC	1																																																																																																																												1
AGTACC		1																																																																																																																											1
AGTAGA	1																																																																																																																												1
AGTAGC	1	1																																																																																																																											2
AGTCGC	1																																																																																																																												1
AGTCGG	1																																																																																																																												1
AGTGGC	1																																																																																																																												1
AGTGTG	1																																																																																																																												1
ATACAC	1																																																																																																																												1
ATAGAG	1																																																																																																																												1
ATATCG	1																																																																																																																												1
ATCAAG		1																																																																																																																											1
ATCAGA	1																																																																																																																												1
ATCGAA											1																																																																																																																		1
ATCTGC	1																																																																																																																												1
ATGCAC	1																																																																																																																												1
ATGCAG	1																																																																																																																												1
ATGCCC	1																																																																																																																												1
ATGCTA			1																																																																																																																										1
ATGCTG	2																																																																																																																												2
ATGGCG	1																																																																																																																												1
ATTAGC		1																																																																																																																											1
ATTATC	1																																																																																																																												1
ATTATG	1																																																																																																																												1
ATTCGC	1	1																																																																																																																											2
ATTGCA	1																																																																																																																												1
ATTGCT	1																																																																																																																												1
ATTGTG	1																																																																																																																												1
CAAAAA	1																																																																																																																												1
CAAAAC	1																																																																																																																												1
CAAAAG	1																																																																																																																												1
CAAACG	1																																																																																																																												1
CAAACT	1																																																																																																																												1
CAAATG	1																																																																																																																												1
CAACAC		1																																																																																																																											1
CAACAG	11				1		1																																																																																																																						13
CAACAT	1																																																																																																																												1
CAACGA		1																																																																																																																											1
CAACGG	1																																																																																																																												1
CAAGAA					1																																																																																																																								1
CAAGAC												1																																																																																																																	1
CAAGAG	1																																																																																																																												1
CAAGCA	1	1																																																																																																																											2
CAAGCG	2																																																																																																																												2
CAATAC		1																																																																																																																											1
CAATAG	1																																																																																																																												1
CAATGC	1																																																																																																																												1
CACAAA	1																																																																																																																												1
CACAAG	1																																																																																																																												1
CACACG	2																																																																																																																												2
CACAGC	1																																																																																																																												1
CACATG	2																																																																																																																												2
CACCAA	2																																																																																																																												2
CACCAG	1																																																																																																																												1
CACCAT	3																																																																																																																												3
CACCCA	1																																																																																																																												1
CACCGC	1																																																																																																																												1
CACGAC	1																																																																																																																												1
CACGAG	1																																																																																																																												1
CACGCA	3	1																																																																																																																											4
CACGTC	1																																																																																																																												1
CACTCT	2																																																																																																																												2
CAGAAG	2																																																																																																																												2
CAGAGC	1																																																																																																																												1
CAGATC	1																																																																																																																												1
CAGATG	1																																																																																																																												1
CAGCAA	18	4		2																																																																																																																									24
CAGCAC	4	1																																																																																																																											5
CAGCAT		2		1																																																																																																																									3
CAGCCA	1																																																																																																																												1
CAGCCG	1																																																																																																																												1
CAGCTC	2																																																																																																																												2
CAGGAA													1																																																																																																																1
CAGGAG									1																																																																																																																				1
CAGGCT			1																																																																																																																										1
CAGGTG			1																																																																																																																										1
CAGTCG	1																																																																																																																												1
CAGTGA		1																																																																																																																											1
CAGTGC		1																																																																																																																											1
CATACA	1																																																																																																																												1
CATCAC	1																																																																																																																												1
CATCAG	2																																																																																																																												2
CATCCA	2																																																																																																																												2
CATCGC		2																																																																																																																											2
CATCGG	1																																																																																																																												1
CATCGT	1																																																																																																																												1
CATCTT	1																																																																																																																												1
CATGAG	1																																																																																																																												1
CATGCC	1																																																																																																																												1
CATGGA		1																																																																																																																											1
CATGTG			1																																																																																																																										1
CATTCA	1																																																																																																																												1
CATTCC		1																																																																																																																											1
CATTCG	4																																																																																																																												4
CATTGC	1		1																																																																																																																										2
CATTTC	1																																																																																																																												1
CATTTT	1																																																																																																																												1
CCAAAA	1																																																																																																																												1
CCAAAT	1																																																																																																																												1
CCAACA	1																																																																																																																												1
CCAACG	1	1																																																																																																																											2
CCAACT		1																																																																																																																											1
CCAAGA												1																																																																																																																	1
CCAATA	1																																																																																																																												1
CCACAC	1																																																																																																																												1
CCACCC	1																																																																																																																												1
CCACCG	1																																																																																																																												1
CCACGA	3																																																																																																																												3
CCACGC	1																																																																																																																												1
CCACGT	1																																																																																																																												1
CCACTG	2																																																																																																																												2
CCAGAA	2																																																																																																																												2
CCAGAT	1																																																																																																																												1
CCAGCA	3																																																																																																																												3
CCAGCG		1																																																																																																																											1
CCAGCT	2																																																																																																																												2
CCAGTA	1																																																																																																																												1
CCATCA	2																																																																																																																												2
CCATCG	3	1																																																																																																																											4
CCATGC	1																																																																																																																												1
CCATTG	2																																																																																																																												2
CCCTTG				1																																																																																																																									1
CCGAAG			1																																																																																																																										1
CCGACT	1																																																																																																																												1
CCGAGT	1																																																																																																																												1
CCGCCA	1	1																																																																																																																											2
CCGGAG	1																																																																																																																												1
CCGTAG		1																																																																																																																											1
CCGTCA	1																																																																																																																												1
CCGTTG	1																																																																																																																												1
CCTCCA	1																																																																																																																												1
CCTCGA	1		1																																																																																																																										2
CCTCGT	1																																																																																																																												1
CCTCTG	1																																																																																																																												1
CCTGCT	1	1	1																																																																																																																										3
CCTTCA		1																																																																																																																											1
CCTTCT	1																																																																																																																												1
CCTTTG	1																																																																																																																												1
CGAACT	1																																																																																																																												1
CGAAGA	1																																																																																																																												1
CGAATG	1																																																																																																																												1
CGACAG	1																																																																																																																												1
CGACCA		1																																																																																																																											1
CGACGC	1																																																																																																																												1
CGACGG	1																																																																																																																												1
CGACTG	2																																																																																																																												2
CGACTT	1																																																																																																																												1
CGAGAA	1																																																																																																																												1
CGAGCA	1																																																																																																																												1
CGAGCC		1																																																																																																																											1
CGAGCG	1																																																																																																																												1
CGAGGA	1																																																																																																																												1
CGAGTC	1																																																																																																																												1
CGATCA	1																																																																																																																												1
CGATGA	3																																																																																																																												3
CGCAAG	1																																																																																																																												1
CGCACA	1																																																																																																																												1
CGCACG	1																																																																																																																												1
CGCACT	1	1																																																																																																																											2
CGCAGT		1																																																																																																																											1
CGCATT	2																																																																																																																												2
CGCCAT		1						1																																																																																																																					2
CGCCGA	2																																																																																																																												2
CGCCGT	1	2																																																																																																																											3
CGCTCA	1																																																																																																																												1
CGCTCG	1																																																																																																																												1
CGCTCT	1	1																																																																																																																											2
CGCTGA	1																																																																																																																												1
CGCTGC	1	2																																																																																																																											3
CGCTGG	1																																																																																																																												1
CGCTGT	1	1																																																																																																																											2
CGCTTG	1																																																																																																																												1
CGCTTT	2																																																																																																																												2
CGGAGC	1																																																																																																																												1
CGGCAA	1																																																																																																																												1
CGGCAC	1																																																																																																																												1
CGGCAT				1																																																																																																																									1
CGGCGA	1																																																																																																																												1
CGGCTG	2																																																																																																																												2
CGGTCG	1																																																																																																																												1
CGTCAT	1																																																																																																																												1
CGTCGA	2																																																																																																																												2
CGTCGC	3																																																																																																																												3
CGTGAG	1																																																																																																																												1
CGTGCT		1																																																																																																																											1
CGTGGT	1																																																																																																																												1
CGTTCT	1																																																																																																																												1
CGTTGC			2																																																																																																																										2
CTACGA	2																																																																																																																												2
CTAGAT	1																																																																																																																												1
CTAGCT	1																																																																																																																												1
CTATCG		1																																																																																																																											1
CTCAAC	1																																																																																																																												1
CTCAAG									1																																																																																																																				1
CTCACA	1																																																																																																																												1
CTCAGT	1																																																																																																																												1
CTCATA	2			1																																																																																																																									3
CTCCAA		2													1																																																																																																														3
CTCCAC	1																																																																																																																												1
CTCCAG	2	1																																																																																																																											3
CTCCGA		1																																																																																																																											1
CTCCTT	1																																																																																																																												1
CTCGAC	1	1																																																																																																																											2
CTCGAG	1																																																																																																																												1
CTCGCG	1																																																																																																																												1
CTCGCT			1																																																																																																																										1
CTCGTC	3																																																																																																																												3
CTCGTT	1																																																																																																																												1
CTCTGA	1																																																																																																																												1
CTCTTG	4							1																																																																																																																					5
CTGCAA	1																																																																																																																												1
CTGCAG	1																																																																																																																												1
CTGCAT	1																																																																																																																												1
CTGCGA			1																																																																																																																										1
CTGCGC		1																																																																																																																											1
CTGCGG	1	1																																																																																																																											2
CTGCGT		1																																																																																																																											1
CTGCTA	2																																																																																																																												2
CTGCTC							1																																																																																																																						1
CTGCTT	4																																																																																																																												4
CTGGAA		1																																																																																																																											1
CTGGAC	1																																																																																																																												1
CTGGAG	3																																																																																																																												3
CTGGCG	1																																																																																																																												1
CTGGTA	1																																																																																																																												1
CTGTGA	1																																																																																																																												1
CTGTGG	1																																																																																																																												1
CTGTTG	4		1																																																																																																																										5
CTTCAT	1																																																																																																																												1
CTTCGA	1				1																																																																																																																								2
CTTCGT	2																																																																																																																												2
CTTCTC	1																																																																																																																												1
CTTCTG	1																																																																																																																												1
CTTGAG	3																																																																																																																												3
CTTGCC	3																																																																																																																												3
CTTGGA	1																																																																																																																												1
CTTGTT										1																																																																																																																			1
CTTTCT	1																																																																																																																												1
CTTTTG	1																																																																																																																												1
CTTTTT	1																																																																																																																												1
GAACCA	1																																																																																																																												1
GAAGAC	2																																																																																																																												2
GAAGAG	1																																																																																																																												1
GAAGAT	1																																																																																																																												1
GAAGCA	1	1			1																																																																																																																								3
GAAGCC		1																																																																																																																											1
GAAGGC	1																																																																																																																												1
GAAGGT		1																																																																																																																											1
GAATGA	1																																																																																																																												1
GACAAG	1																																																																																																																												1
GACACA	1																																																																																																																												1
GACACC	1																																																																																																																												1
GACCAA	1																																																																																																																												1
GACCGC	1																																																																																																																												1
GACCTC	1																																																																																																																												1
GACGAG	5																																																																																																																												5
GACGAT	2	1																																																																																																																											3
GACGCA	1																																																																																																																												1
GACGCG	1																																																																																																																												1
GACTCG	2																																																																																																																												2
GACTCT		1																																																																																																																											1
GACTGC		1													1																																																																																																														2
GACTTT	1																																																																																																																												1
GAGACA	1																																																																																																																												1
GAGAGC	1	2																																																																																																																											3
GAGAGG	1																																																																																																																												1
GAGAGT				1																																																																																																																									1
GAGATC	1																																																																																																																												1
GAGATG	1																																																																																																																												1
GAGCAA	2	1																																																																																																																											3
GAGCAC	1																																																																																																																												1
GAGCAG		1		1																																																																																																																									2
GAGCCA	1																																																																																																																												1
GAGCCT	1																																																																																																																												1
GAGCGA	1																																																																																																																												1
GAGCGC	1																																																																																																																												1
GAGCTC	1																																																																																																																												1
GAGCTG	2						1																																																																																																																						3
GAGCTT		1																																																																																																																											1
GAGGAC		1																																																																																																																											1
GAGTCC	1																																																																																																																												1
GAGTCT	1																																																																																																																												1
GAGTGA	1																																																																																																																												1
GAGTTC	1																																																																																																																												1
GATCGC	1																																																																																																																												1
GATCTC	1																																																																																																																												1
GATCTG	1																																																																																																																												1
GATGAA	1				1																																																																																																																								2
GATGAC	5																																																																																																																												5
GATGAG	1																																																																																																																												1
GATGGC	3				1																																																																																																																								4
GATGGT		1																																																																																																																											1
GATTCT	2																																																																																																																												2
GCAAAG	1																																																																																																																												1
GCAACA		1																																																																																																																											1
GCAACG						1																																																																																																																							1
GCAAGA		1																																																																																																																											1
GCAATC		1																																																																																																																											1
GCAATG	2																																																																																																																												2
GCACAA	1																																																																																																																												1
GCACAT	1																																																																																																																												1
GCACCA	3																																																																																																																												3
GCACTT	1																																																																																																																												1
GCAGAA				1																																																																																																																									1
GCAGAC	1																																																																																																																												1
GCAGAG	1																																																																																																																												1
GCAGAT		1																																																																																																																											1
GCAGCC	3																																																																																																																												3
GCAGCG	2																																																																																																																												2
GCAGCT	2																																																																																																																												2
GCAGGA	2																																																																																																																												2
GCAGGT	1																																																																																																																												1
GCAGTA		1		1						1			1																																																																																																																4
GCAGTC		2																																																																																																																											2
GCATAC	1																																																																																																																												1
GCATCA		1																																																																																																																											1
GCATCC	1																																																																																																																												1
GCATGA	1																																																																																																																												1
GCATGG		1																																																																																																																											1
GCATTT	1																																																																																																																												1
GCCAAA	1																																																																																																																												1
GCCAAC		2																																																																																																																											2
GCCAAG	1																																																																																																																												1
GCCACA	1																																																																																																																												1
GCCACC	2																																																																																																																												2
GCCGCA	1																																																																																																																												1
GCCGCG	1																																																																																																																												1
GCCGGT		1																																																																																																																											1
GCCGTC	1	1																																																																																																																											2
GCGAAA	1																																																																																																																												1
GCGAAG	1																																																																																																																												1
GCGAAT		1																																																																																																																											1
GCGACG	3																																																																																																																												3
GCGACT	1																		1																																																																																																										2
GCGAGA	1																																																																																																																												1
GCGATG	2																																																																																																																												2
GCGCGA	1																																																																																																																												1
GCGCTG				1																																																																																																																									1
GCGGCA	1																																																																																																																												1
GCGGTC	1	1																																																																																																																											2
GCGGTG	1																																																																																																																												1
GCGTCA	1																																																																																																																												1
GCGTCT		1																																																																																																																											1
GCGTGT	1																																																																																																																												1
GCGTTA			1																																																																																																																										1
GCGTTC	1																																																																																																																												1
GCGTTG									1																																																																																																																				1
GCGTTT			1																																																																																																																										1
GCTACT	1																																																																																																																												1
GCTATG	1																																																																																																																												1
GCTCAC	2																																																																																																																												2
GCTCCA	1	1																																																																																																																											2
GCTCCT	2			1																																																																																																																									3
GCTCGC	1																																																																																																																												1
GCTCGT	2																																																																																																																												2
GCTCTG	1																																																																																																																												1
GCTCTT	1																																																																																																																												1
GCTGCC	2		1																																																																																																																										3
GCTGGA		1	1	1																																																																																																																									3
GCTGTT	5	3									1																																																																																																																		9
GCTTCG	1																																																																																																																												1
GCTTCT	4																																																																																																																												4
GCTTGA	3																																																																																																																												3
GCTTGC	1																																																																																																																												1
GCTTTT		1		1																																																																																																																									2
GGAAGA	1																																																																																																																												1
GGAATG	1																																																																																																																												1
GGACAA		1																																																																																																																											1
GGACGA	1																																																																																																																												1
GGACTC	1																																																																																																																												1
GGAGCA		1		2																																																																																																																									3
GGAGCG	1																																																																																																																												1
GGAGCT	2																																																																																																																												2
GGAGTT	1																																																																																																																												1
GGATGC	1																																																																																																																												1
GGCAAG	1																																																																																																																												1
GGCAAT	1																																																																																																																												1
GGCACA	1																																																																																																																												1
GGCAGC	1	1																																																																																																																											2
GGCAGT	1	1																																																																																																																											2
GGCATC	1																																																																																																																												1
GGCATG	1																																																																																																																												1
GGCGAC	1																																																																																																																												1
GGCGAG	1																																																																																																																												1
GGCGAT	1																																																																																																																												1
GGCGGT					1																																																																																																																								1
GGCGTG	1																																																																																																																												1
GGCGTT	2	1																																																																																																																											3
GGCTTT	1																																																																																																																												1
GGGAAT	2																																																																																																																												2
GGGGGC	1																																																																																																																												1
GGGTCT	1																																																																																																																												1
GGTCGC	1																																																																																																																												1
GGTGAT	1																																																																																																																												1
GGTGCA	2																																																																																																																												2
GGTGCC	1																																																																																																																												1
GGTGCT	2																																																																																																																												2
GGTGGC	2																																																																																																																												2
GGTGTC	1																																																																																																																												1
GGTGTT	1																																																																																																																												1
GGTTTT	1																																																																																																																												1
GTACAG	1																																																																																																																												1
GTACCT	1																																																																																																																												1
GTAGCT		1																																																																																																																											1
GTATGC			1																																																																																																																										1
GTATGT	2																																																																																																																												2
GTCACC	1																																																																																																																												1
GTCATC	2																																																																																																																												2
GTCATG	1																																																																																																																												1
GTCCAC	2																																																																																																																												2
GTCCAT	1																																																																																																																												1
GTCCCA											1																																																																																																																		1
GTCCTC	1																																																																																																																												1
GTCCTT	1																																																																																																																												1
GTCGAC	2																																																																																																																												2
GTCGAG	1																																																																																																																												1
GTCGCA	1	1																																																																																																																											2
GTCGCT	1			1																																																																																																																									2
GTCGGA																			1																																																																																																										1
GTCGTG	2																																																																																																																												2
GTCGTT	1																																																																																																																												1
GTCTGA	1																																																																																																																												1
GTCTTC	2																																																																																																																												2
GTCTTG	1																																																																																																																												1
GTGACG	1																																																																																																																												1
GTGAGG	1																																																																																																																												1
GTGATG	1																																																																																																																												1
GTGCAG	1																																																																																																																												1
GTGCCA	1																																																																																																																												1
GTGCGT	2	1																																																																																																																											3
GTGCTT	2																																																																																																																												2
GTGGAG	1																																																																																																																												1
GTGGCA		1																																																																																																																											1
GTGGCG	1																																																																																																																												1
GTGTAC	1																																																																																																																												1
GTGTCC	1																																																																																																																												1
GTGTCT	2																																																																																																																												2
GTGTGC	1	1																																																																																																																											2
GTTCAT	1																																																																																																																												1
GTTCCT	1																																																																																																																												1
GTTCTT	1																																																																																																																												1
GTTGCT	5																																																																																																																												5
GTTGGA							1																																																																																																																						1
GTTGGC	2						1																																																																																																																						3
GTTGGT	2																																																																																																																												2
GTTGTC	2																																																																																																																												2
GTTGTG	1																																																																																																																												1
GTTTTT	1																																																																																																																												1
TAAAAA	1																																																																																																																												1
TAATGC	1																																																																																																																												1
TACACA		1																																																																																																																											1
TACATG	1																																																																																																																												1
TACCAC	1																																																																																																																												1
TACCTG	1																																																																																																																												1
TACGGC			1																																																																																																																										1
TACTGC	2																																																																																																																												2
TAGAGC	1																																																																																																																												1
TAGCAA	3																																																																																																																												3
TAGCAG	1																																																																																																																												1
TATGTG	1																																																																																																																												1
TATTGC	1																																																																																																																												1
TATTTC	1																																																																																																																												1
TCAAGA	1																																																																																																																												1
TCAAGC	2																																																																																																																												2
TCAAGG	1																																																																																																																												1
TCACAT	1																																																																																																																												1
TCACGC	1																																																																																																																												1
TCAGCA	3									1																																																																																																																			4
TCAGCG		1																																																																																																																											1
TCAGGA		1																																																																																																																											1
TCATCG	2																																																																																																																												2
TCATCT	1																																																																																																																												1
TCATGC	1																																																																																																																												1
TCATGG	1																																																																																																																												1
TCCATG	1																																																																																																																												1
TCCTCG	1																																																																																																																												1
TCCTCT	1																																																																																																																												1
TCCTGC	1																																																																																																																												1
TCGACC	2																																																																																																																												2
TCGAGA	1																																																																																																																												1
TCGAGT		1																																																																																																																											1
TCGCAG	1																																																																																																																												1
TCGCAT		1																																																																																																																											1
TCGCCA	1																																																																																																																												1
TCGCCC	1																																																																																																																												1
TCGCCT	1																																																																																																																												1
TCGCTC	1																																																																																																																												1
TCGCTG								1																																																																																																																					1
TCGGAC	1																																																																																																																												1
TCGGAG		1											1																																																																																																																2
TCGGCG	1																																																																																																																												1
TCGGGC	1																																																																																																																												1
TCGTAC	1																																																																																																																												1
TCGTCA	2	1																																																																																																																											3
TCGTCC	2	1																																																																																																																											3
TCGTCT	2	1				1																																																																																																																							4
TCGTTT	1																																																																																																																												1
TCTCAC	2																																																																																																																												2
TCTCCC	1																																																																																																																												1
TCTCCG	1																																																																																																																												1
TCTCGC	1																																																																																																																												1
TCTCGG	1																																																																																																																												1
TCTCGT	2																																																																																																																												2
TCTCTG	1	1																																																																																																																											2
TCTCTT		1																																																																																																																											1
TCTGCA	1	1																																																																																																																											2
TCTGCT		1																																																																																																																											1
TCTGTC									1																																																																																																																				1
TCTGTG	1																																																																																																																												1
TCTTCG	1																																																																																																																												1
TCTTGC	1		1											1																																																																																																															3
TCTTGT	1	1																																																																																																																											2
TCTTTC	1																																																																																																																												1
TGACCG	1																																																																																																																												1
TGACGA	3																																																																																																																												3
TGAGCC							1																																																																																																																						1
TGAGCG	1																																																																																																																												1
TGAGTG	1																																																																																																																												1
TGATAC	1																																																																																																																												1
TGATGC	2																																																																																																																												2
TGATGG	1																																																																																																																												1
TGATTC	1																																																																																																																												1
TGATTT	1																																																																																																																												1
TGCAAG		1																																																																																																																											1
TGCACA	1																																																																																																																												1
TGCACC	1																																																																																																																												1
TGCATG	2																																																																																																																												2
TGCCAC	2																																																																																																																												2
TGCCGC	1																																																																																																																												1
TGCGAC	1																																																																																																																												1
TGCGAG	2																																																																																																																												2
TGCGTG							1																																																																																																																						1
TGCGTT	1	1																																																																																																																											2
TGCTAA	2																																																																																																																												2
TGCTAT			1																																																																																																																										1
TGCTCC	1									1																																																																																																																			2
TGCTCT	1	1																																																																																																																											2
TGCTGA	4																																																																																																																												4
TGCTGG	5																																																																																																																												5
TGCTGT	11	2			1																																																																																																																								14
TGCTTC																			1																																																																																																										1
TGCTTT	1																																																																																																																												1
TGGAGA	1																																																																																																																												1
TGGCAA	1																																																																																																																												1
TGGCGG	2		1																																																																																																																										3
TGGGCT	1	1																																																																																																																											2
TGGTCG	2																																																																																																																												2
TGGTCT	1																																																																																																																												1
TGGTGA	2																																																																																																																												2
TGGTGC	4																																																																																																																												4
TGGTGT	2																																																																																																																												2
TGGTTC		1																																																																																																																											1
TGTCAT		1																																																																																																																											1
TGTCGT		1																																																																																																																											1
TGTGAT	2																																																																																																																												2
TGTGCA			1																																																																																																																										1
TGTGCT	1																																																																																																																												1
TGTGGC	1																																																																																																																												1
TGTGTA	4																																																																																																																												4
TGTGTC						1																																																																																																																							1
TGTTCC	1																																																																																																																												1
TGTTCT	2																																																																																																																												2
TGTTGA	1																																																																																																																												1
TGTTGC	3	2																																																																																																																											5
TGTTGG	1				1																																																																																																																								2
TTACTG	1																																																																																																																												1
TTCAGG	1																																																																																																																												1
TTCCAT	2																																																																																																																												2
TTCCGA	1																																																																																																																												1
TTCCTC	1																																																																																																																												1
TTCCTG	1																																																																																																																												1
TTCGAA		1																																																																																																																											1
TTCGCA	1																																																																																																																												1
TTCGGC	1																																																																																																																												1
TTCGTA	1																																																																																																																												1
TTCGTC	1																																																																																																																												1
TTCTCA	1																																																																																																																												1
TTCTCT		1																																																																																																																											1
TTCTGC	2																																																																																																																												2
TTCTTG	3	1																																																																																																																											4
TTGACC		1																																																																																																																											1
TTGAGA	1																																																																																																																												1
TTGAGC	1																																																																																																																												1
TTGATG	1																																																																																																																												1
TTGCAT	1		1																																																																																																																										2
TTGCCA	3	1	1																																																																																																																										5
TTGCCT	1																																																																																																																												1
TTGCGA	1																																																																																																																												1
TTGCGT	1																																																																																																																												1
TTGCTA					1																																																																																																																								1
TTGCTG	1	4		1						1								1	1																																																																																																										9
TTGCTT	1																																																																																																																												1
TTGGCT	1																																																																																																																												1
TTGGTT	1																																																																																																																												1
TTGTAT			1																																																																																																																										1
TTGTCA	1																																																																																																																												1
TTGTCC	1																																																																																																																												1
TTGTCG	1																																																																																																																												1
TTGTGA	1																																																																																																																												1
TTGTGC	1																																																																																																																												1
TTGTGT	1																																																																																																																												1
TTGTTA	1																																																																																																																												1
TTGTTC	2							1																																																																																																																					3
TTGTTT	1																																																																																																																												1
TTTCCG	1																																																																																																																												1
TTTGAC	1																																																																																																																												1
TTTGAT	1																																																																																																																												1
TTTGCT	1																																																																																																																												1
TTTGTC		1																																																																																																																											1
TTTGTG	1																																																																																																																												1
TTTTCA	1																																																																																																																												1
TTTTCG	1																																																																																																																												1
TTTTGG										1																																																																																																																			1
TTTTTC	1																																																																																																																												1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-						1			1			2																																																																																																4
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	14	14	3	7	1	3	1					1		1						1																																																					1																																	1	58
AC/GT	-	-	-	528	242	144	78	53	35	22	18	11	10	10	5	2	1	6	3	2	2	1	5	1	2																																																																																																				1181
AG/CT	-	-	-	604	328	229	139	93	76	65	52	37	36	28	22	15	12	9	6	4	4	2	3	6	2	1		2	1																																																																																																1776
AT/AT	-	-	-	28	19	8	12	11	5		2	4	3	1	1	2					1																																																																																																								97
CG/CG	-	-	-	65	4	4																																																																																																																							73
AAC/GTT	-	-	173	73	28	13	7	6	1	2			3																																																																																																																306
AAG/CTT	-	-	188	65	25	11	9	7	2	1	1																																																																																																																		309
AAT/ATT	-	-	3	2			1																																																																																																																						6
ACC/GGT	-	-	151	46	12	11	3	1	1	1	1																																																																																																																		227
ACG/CGT	-	-	172	47	25	9	4	1				1																																																																																																																	259
ACT/AGT	-	-	18	3	3	2																																																																																																																							26
AGC/CTG	-	-	646	192	66	31	12	4	4			1																																																																																																																	956
AGG/CCT	-	-	50	16	9	4	1	2			1																																																																																																																		83
ATC/ATG	-	-	84	34	12	4	1		3																																																																																																																				138
CCG/CGG	-	-	68	21	8	1	2	1					1																																																																																																																102
AAAC/GTTT	-	34	7	4	1																																																																																																																								46
AAAG/CTTT	-	17	2	1																																																																																																																									20
AAAT/ATTT	-	3																																																																																																																											3
AACC/GGTT	-	26	7	1			1																																																																																																																						35
AACG/CGTT	-	22	2	2																																																																																																																									26
AACT/AGTT	-	6																																																																																																																											6
AAGC/CTTG	-	39																																																																																																																											39
AAGG/CCTT	-	36	12				1																																																																																																																						49
AAGT/ACTT	-	2																																																																																																																											2
AATC/ATTG	-	52	10	6	1																																																																																																																								69
AATG/ATTC	-	44	5	1		1	1																																																																																																																						52
ACAG/CTGT	-	54	15	5	2																																																																																																																								76
ACAT/ATGT	-	20	3																																																																																																																										23
ACCC/GGGT	-	8	3	1																																																																																																																									12
ACCG/CGGT	-	4																																																																																																																											4
ACCT/AGGT	-	12	3																																																																																																																										15
ACGC/CGTG	-	34	3																																																																																																																										37
ACGG/CCGT	-	38	7	4	1																																																																																																																								50
ACGT/ACGT	-	1																																																																																																																											1
ACTC/AGTG	-	42	16	3	2		1				1																																																																																																																		65
ACTG/AGTC	-	67	22	2	1	2	1		1																																																																																																																				96
AGAT/ATCT	-	35	9		5	2		1	1																																																																																																																				53
AGCC/CTGG	-	32	9	3	4																																																																																																																								48
AGCG/CGCT	-	82	15	2	2																																																																																																																								101
AGCT/AGCT	-	1																																																																																																																											1
AGGC/CCTG	-	26	4																																																																																																																										30
AGGG/CCCT	-	15		1	1																																																																																																																								17
ATCC/ATGG	-	83	24	7	3	2		1			1		1																																																																																																																122
ATCG/ATCG	-	17	3																																																																																																																										20
ATGC/ATGC	-	15	1																																																																																																																										16
CCCG/CGGG	-	12	1	1		1																																																																																																																							15
CCGG/CCGG	-	1																																																																																																																											1
AAAAC/GTTTT	36	4																																																																																																																											40
AAAAG/CTTTT	11																																																																																																																												11
AAAAT/ATTTT	4																																																																																																																												4
AAACC/GGTTT	11	2		1																																																																																																																									14
AAACG/CGTTT	5																																																																																																																												5
AAACT/AGTTT	4	1																																																																																																																											5
AAAGC/CTTTG	44																																																																																																																												44
AAAGG/CCTTT	6																																																																																																																												6
AAAGT/ACTTT	1																																																																																																																												1
AAATC/ATTTG	14	1																																																																																																																											15
AAATG/ATTTC	14	1																																																																																																																											15
AACAC/GTGTT	27	2	1																																																																																																																										30
AACAG/CTGTT	6																																																																																																																												6
AACCC/GGGTT	5	1																																																																																																																											6
AACCG/CGGTT	1																																																																																																																												1
AACCT/AGGTT	1																																																																																																																												1
AACGC/CGTTG	13	1																																																																																																																											14
AACTC/AGTTG	13	2																																																																																																																											15
AACTG/AGTTC	7																																																																																																																												7
AAGAC/CTTGT	8																																																																																																																												8
AAGAG/CTCTT	22	4																																																																																																																											26
AAGCC/CTTGG	15	2																																																																																																																											17
AAGCG/CGCTT	9																																																																																																																												9
AAGCT/AGCTT	3																																																																																																																												3
AAGGC/CCTTG	9	2																																																																																																																											11
AAGGG/CCCTT	9	1																																																																																																																											10
AAGTC/ACTTG	7																																																																																																																												7
AAGTG/ACTTC	10		1				1																																																																																																																						12
AATAC/ATTGT	5																																																																																																																												5
AATAG/ATTCT	6																																																																																																																												6
AATAT/ATATT	3																																																																																																																												3
AATCC/ATTGG	6		1																																																																																																																										7
AATCG/ATTCG	15	3	1																																																																																																																										19
AATCT/AGATT	1																																																																																																																												1
AATGC/ATTGC	18	2																																																																																																																											20
AATGG/ATTCC	11	1																																																																																																																											12
AATTC/AATTG	8																																																																																																																												8
ACACC/GGTGT	13	2						1																																																																																																																					16
ACACG/CGTGT	12	2	1																																																																																																																										15
ACACT/AGTGT	3																																																																																																																												3
ACAGC/CTGTG	26	1	1																																																																																																																										28
ACAGG/CCTGT	11					1																																																																																																																							12
ACAGT/ACTGT	6	1																																																																																																																											7
ACATC/ATGTG	12	1	1								1																																																																																																																		15
ACATG/ATGTC	4																																																																																																																												4
ACCAG/CTGGT	10																																																																																																																												10
ACCAT/ATGGT	3	1																																																																																																																											4
ACCCC/GGGGT	5																																																																																																																												5
ACCCG/CGGGT	4																																																																																																																												4
ACCGC/CGGTG	1																																																																																																																												1
ACCGG/CCGGT	1																																																																																																																												1
ACCGT/ACGGT	2																																																																																																																												2
ACCTC/AGGTG	15	1																																																																																																																											16
ACCTG/AGGTC	3						1																																																																																																																						4
ACGAG/CGTCT	13	1																																																																																																																											14
ACGCC/CGTGG	16	1																																																																																																																											17
ACGCG/CGCGT	9																																																																																																																												9
ACGCT/AGCGT	1																																																																																																																												1
ACGGG/CCCGT	1																																																																																																																												1
ACGTC/ACGTG	3	1																																																																																																																											4
ACTAG/AGTCT	3																																																																																																																												3
ACTAT/AGTAT	4	1																																																																																																																											5
ACTCC/AGTGG	5		1																																																																																																																										6
ACTCG/AGTCG	13	4																																																																																																																											17
ACTCT/AGAGT	3		1																																																																																																																										4
ACTGC/AGTGC	10			1																																																																																																																									11
ACTGG/AGTCC	6																																																																																																																												6
AGAGC/CTCTG	37	2																																																																																																																											39
AGAGG/CCTCT	10																																																																																																																												10
AGATC/ATCTG	5	1																																																																																																																											6
AGATG/ATCTC	8	1																																																																																																																											9
AGCAT/ATGCT	1																																																																																																																												1
AGCCC/CTGGG	8										1																																																																																																																		9
AGCCG/CGGCT	9	3																																																																																																																											12
AGCCT/AGGCT	2																																																																																																																												2
AGCGC/CGCTG	13																																																																																																																												13
AGCGG/CCGCT	3																																																																																																																												3
AGCTC/AGCTG	42	6	1	1																																																																																																																									50
AGGAT/ATCCT	2																																																																																																																												2
AGGCC/CCTGG	1																																																																																																																												1
AGGCG/CCTCG	7	2	1																																																																																																																										10
AGGGG/CCCCT	4																																																																																																																												4
ATATC/ATATG	1	1																																																																																																																											2
ATCCC/ATGGG	6																																																																																																																												6
ATCCG/ATCGG	5	1		1																																																																																																																									7
ATCGC/ATGCG	18	2																																																																																																																											20
ATGCC/ATGGC	7																																																																																																																												7
CCCCG/CGGGG	6	1																																																																																																																											7
CCGCG/CGCGG	7	1																																																																																																																											8
AAAAAC/GTTTTT	4		1																																																																																																																										5
AAAAAG/CTTTTT	5																																																																																																																												5
AAAAAT/ATTTTT	1																																																																																																																												1
AAAACC/GGTTTT	5									1																																																																																																																			6
AAAACG/CGTTTT	4																																																																																																																												4
AAAAGC/CTTTTG	7	1		1																																																																																																																									9
AAAATC/ATTTTG	3																																																																																																																												3
AAAATG/ATTTTC	3																																																																																																																												3
AAACAC/GTGTTT	3																																																																																																																												3
AAACGC/CGTTTG	3	1	1																																																																																																																										5
AAACGG/CCGTTT	1																																																																																																																												1
AAACTC/AGTTTG	1																																																																																																																												1
AAAGAC/CTTTGT	1	1																																																																																																																											2
AAAGAG/CTCTTT	4	4																																																																																																																											8
AAAGCC/CTTTGG	4																																																																																																																												4
AAAGCG/CGCTTT	6																																																																																																																												6
AAAGGC/CCTTTG	3																																																																																																																												3
AAAGTC/ACTTTG	2																																																																																																																												2
AAAGTG/ACTTTC	1																																																																																																																												1
AAATAC/ATTTGT			1																																																																																																																										1
AAATAG/ATTTCT	1																																																																																																																												1
AAATCC/ATTTGG	1																																																																																																																												1
AAATCG/ATTTCG											1																																																																																																																		1
AAATGC/ATTTGC	3		1																																																																																																																										4
AAATGG/ATTTCC	3																																																																																																																												3
AACAAG/CTTGTT	16	2			1		1	1		3								1																																																																																																											25
AACAAT/ATTGTT	1																																																																																																																												1
AACACC/GGTGTT	9	2			1																																																																																																																								12
AACACG/CGTGTT			1																																																																																																																										1
AACAGC/CTGTTG	67	22	2	3	3		1			1	1							1	1																																																																																																										102
AACAGG/CCTGTT	5					1							1																																																																																																																7
AACAGT/ACTGTT	1																																																																																																																												1
AACATC/ATGTTG	3																																																																																																																												3
AACATG/ATGTTC	2																																																																																																																												2
AACCAC/GGTTGT	2																																																																																																																												2
AACCAG/CTGGTT	5	1																																																																																																																											6
AACCTC/AGGTTG	1																																																																																																																												1
AACCTG/AGGTTC	1	1																																																																																																																											2
AACGAC/CGTTGT	4	2	1																																																																																																																										7
AACGAG/CGTTCT	7		1																																																																																																																										8
AACGCC/CGTTGG	8	5		1			1		1																																																																																																																				16
AACGCG/CGCGTT	2																																																																																																																												2
AACGCT/AGCGTT			1																																																																																																																										1
AACGGC/CCGTTG	3		2			1																																																																																																																							6
AACTCC/AGTTGG	1	3	1				1								1																																																																																																														7
AACTCG/AGTTCG	3	1																																																																																																																											4
AACTGC/AGTTGC	1																																																																																																																												1
AACTGG/AGTTCC		1																																																																																																																											1
AAGACC/CTTGGT	3											2																																																																																																																	5
AAGACG/CGTCTT	11	3				1																																																																																																																							15
AAGAGC/CTCTTG	14	3	2			1		1						1																																																																																																															22
AAGAGG/CCTCTT	6																																																																																																																												6
AAGATC/ATCTTG	1	1																																																																																																																											2
AAGATG/ATCTTC	5				1																																																																																																																								6
AAGCAC/CTTGTG	7	1																																																																																																																											8
AAGCAG/CTGCTT	21	2		1	2												1		1																																																																																																										28
AAGCCC/CTTGGG	2	1																																																																																																																											3
AAGCCG/CGGCTT	2	1	1																																																																																																																										4
AAGCGC/CGCTTG	6																																																																																																																												6
AAGCTC/AGCTTG	11	1							1																																																																																																																				13
AAGCTG/AGCTTC	3																																																																																																																												3
AAGGAC/CCTTGT	3	1																																																																																																																											4
AAGGAG/CCTTCT	4																																																																																																																												4
AAGGCC/CCTTGG	1																																																																																																																												1
AAGGCG/CCTTCG	3																																																																																																																												3
AAGGGC/CCCTTG	4			1																																																																																																																									5
AAGGTC/ACCTTG	2	1																																																																																																																											3
AAGGTG/ACCTTC		2																																																																																																																											2
AAGTAG/ACTTCT	1																																																																																																																												1
AAGTCC/ACTTGG	1																																																																																																																												1
AAGTCG/ACTTCG	2				1																																																																																																																								3
AAGTGC/ACTTGC	1	1																																																																																																																											2
AATACC/ATTGGT	1	1																																																																																																																											2
AATACG/ATTCGT	1																																																																																																																												1
AATAGC/ATTGCT	6		1		1																																																																																																																								8
AATATC/ATATTG	1																																																																																																																												1
AATCAC/ATTGTG	4																																																																																																																												4
AATCAG/ATTCTG	4																																																																																																																												4
AATCAT/ATGATT	1																																																																																																																												1
AATCCG/ATTCGG	1																																																																																																																												1
AATCGC/ATTGCG	1	1																																																																																																																											2
AATCGG/ATTCCG	1																																																																																																																												1
AATCTC/AGATTG	1																																																																																																																												1
AATCTG/AGATTC	1																																																																																																																												1
AATGAC/ATTGTC	1	1																																																																																																																											2
AATGAG/ATTCTC	3																																																																																																																												3
AATGAT/ATCATT	1																																																																																																																												1
AATGCC/ATTGGC	1																																																																																																																												1
AATGCG/ATTCGC	9	4																																																																																																																											13
AATGCT/AGCATT	3	1	1																																																																																																																										5
AATGGC/ATTGCC	11	1	2																																																																																																																										14
AATGGG/ATTCCC	3	1																																																																																																																											4
AATGGT/ACCATT	1																																																																																																																												1
AATGTG/ACATTC	3																																																																																																																												3
AATTCG/AATTCG		1																																																																																																																											1
AATTGC/AATTGC	1																																																																																																																												1
ACACAG/CTGTGT	5					1																																																																																																																							6
ACACAT/ATGTGT	10	1																																																																																																																											11
ACACCC/GGGTGT	2																																																																																																																												2
ACACCG/CGGTGT	2	1																																																																																																																											3
ACACGC/CGTGTG	12	3					1																																																																																																																						16
ACACGG/CCGTGT	1																																																																																																																												1
ACACGT/ACGTGT	1																																																																																																																												1
ACACTC/AGTGTG	3																																																																																																																												3
ACAGAG/CTCTGT	3	1							1																																																																																																																				5
ACAGCC/CTGTGG	5																																																																																																																												5
ACAGCG/CGCTGT	3	2		1				1																																																																																																																					7
ACAGCT/AGCTGT		1																																																																																																																											1
ACAGGC/CCTGTG	1																																																																																																																												1
ACAGGT/ACCTGT	3																																																																																																																												3
ACAGTC/ACTGTG	2																																																																																																																												2
ACAGTG/ACTGTC		1																																																																																																																											1
ACATCC/ATGTGG	2																																																																																																																												2
ACATGC/ATGTGC	7		2																																																																																																																										9
ACATGG/ATGTCC	2	1																																																																																																																											3
ACATGT/ACATGT	1																																																																																																																												1
ACCACG/CGTGGT	9	1																																																																																																																											10
ACCACT/AGTGGT	1																																																																																																																												1
ACCAGC/CTGGTG	23	1																																																																																																																											24
ACCAGT/ACTGGT	2	1																																																																																																																											3
ACCATC/ATGGTG	11	1																																																																																																																											12
ACCATG/ATGGTC	2																																																																																																																												2
ACCCAG/CTGGGT	1																																																																																																																												1
ACCCCC/GGGGGT	1																																																																																																																												1
ACCCTC/AGGGTG	1																																																																																																																												1
ACCGAG/CGGTCT	1																																																																																																																												1
ACCGCC/CGGTGG	11	1	1		1																																																																																																																								14
ACCGCG/CGCGGT	4	1																																																																																																																											5
ACCGCT/AGCGGT	1																																																																																																																												1
ACCGGC/CCGGTG	3	1																																																																																																																											4
ACCGTC/ACGGTG	3																																																																																																																												3
ACCGTG/ACGGTC	1																																																																																																																												1
ACCTCC/AGGTGG	3																																																																																																																												3
ACCTCG/AGGTCG	6	1	1																																																																																																																										8
ACCTGC/AGGTGC	6		1																																																																																																																										7
ACCTGG/AGGTCC	1																																																																																																																												1
ACGACT/AGTCGT	2																																																																																																																												2
ACGAGC/CGTGCT	7	1																																																																																																																											8
ACGAGG/CCTCGT	15	3																																																																																																																											18
ACGAGT/ACTCGT	1																																																																																																																												1
ACGATC/ATCGTG	1																																																																																																																												1
ACGATG/ATCGTC	23	2																																																																																																																											25
ACGCAG/CGTCTG	2	2																																																																																																																											4
ACGCAT/ATGCGT	1		1																																																																																																																										2
ACGCCC/CGTGGG	3																																																																																																																												3
ACGCCG/CGGCGT	4																																																																																																																												4
ACGCGC/CGCGTG	1																																																																																																																												1
ACGCGG/CCGCGT	1																																																																																																																												1
ACGCTC/AGCGTG	7																																																																																																																												7
ACGCTG/AGCGTC	2	1																1																																																																																																											4
ACGGAG/CCGTCT	1																																																																																																																												1
ACGGCG/CCGTCG	11	3																																																																																																																											14
ACGGCT/AGCCGT		1	1																																																																																																																										2
ACGTCC/ACGTGG	5																																																																																																																												5
ACGTCG/ACGTCG	4																																																																																																																												4
ACTCAG/AGTCTG	2																																																																																																																												2
ACTCAT/AGTATG	2			1																																																																																																																									3
ACTCCG/AGTCGG	2	2											1						1																																																																																																										6
ACTCCT/AGGAGT	1																																																																																																																												1
ACTCGC/AGTGCG	3	1	1																																																																																																																										5
ACTCGG/AGTCCG	8																																																																																																																												8
ACTCTC/AGAGTG	5			1																																																																																																																									6
ACTCTG/AGAGTC	2	1																																																																																																																											3
ACTGAG/AGTCTC	1																																																																																																																												1
ACTGAT/AGTATC	1																																																																																																																												1
ACTGCC/AGTGGC	6	2																																																																																																																											8
ACTGCG/AGTCGC	9	5	1												1				1																																																																																																										17
ACTGCT/AGCAGT	8	5		1						1			1																																																																																																																16
ACTGGC/AGTGCC	1	1																																																																																																																											2
ACTGGG/AGTCCC											1																																																																																																																		1
AGAGAT/ATCTCT	1																																																																																																																												1
AGAGCC/CTCTGG	3																																																																																																																												3
AGAGCG/CGCTCT	9	4	1																																																																																																																										14
AGAGCT/AGCTCT	2																																																																																																																												2
AGAGGC/CCTCTG	2	1																																																																																																																											3
AGAGGG/CCCTCT	2																																																																																																																												2
AGATCC/ATCTGG	3																																																																																																																												3
AGATCG/ATCTCG	4																																																																																																																												4
AGATCT/AGATCT	1																																																																																																																												1
AGATGC/ATCTGC	6	2																																																																																																																											8
AGATGG/ATCTCC	2																																																																																																																												2
AGCAGG/CCTGCT	10	3	2	5			1		1	1																																																																																																																			23
AGCATC/ATGCTG	13	3		1						1																																																																																																																			18
AGCATG/ATGCTC	3																																																																																																																												3
AGCCAT/ATGGCT	1																																																																																																																												1
AGCCCG/CGGGCT	1	1																																																																																																																											2
AGCCGC/CGGCTG	9	1																																																																																																																											10
AGCCGG/CCGGCT	3																																																																																																																												3
AGCCTG/AGGCTC	2		1				1																																																																																																																						4
AGCGAT/ATCGCT		1																																																																																																																											1
AGCGCC/CGCTGG	2	1		1																																																																																																																									4
AGCGCG/CGCGCT	6																																																																																																																												6
AGCGGC/CCGCTG	9	3	1																																																																																																																										13
AGCGGG/CCCGCT	1																																																																																																																												1
AGCTCC/AGCTGG	15	3	1	1			1																																																																																																																						21
AGCTCG/AGCTCG	2																																																																																																																												2
AGCTGC/AGCTGC	3																																																																																																																												3
AGGATC/ATCCTG		1																																																																																																																											1
AGGATG/ATCCTC	1																																																																																																																												1
AGGCCG/CCTCGG	2																																																																																																																												2
AGGCGC/CCTGCG		1																																																																																																																											1
AGGGCG/CCCTCG	2																																																																																																																												2
ATATCG/ATATCG	1																																																																																																																												1
ATCCGC/ATGCGG	2																																																																																																																												2
ATCGCC/ATGGCG	11	4			1			1																																																																																																																					17
ATCGCG/ATCGCG	1																																																																																																																												1
ATCGGC/ATGCCG	2			1																																																																																																																									3
ATGCCC/ATGGGC	4	1																																																																																																																											5
CCCCCG/CGGGGG	1																																																																																																																												1
CCGCGG/CCGCGG	1																																																																																																																												1
