Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_031305395.1/fasta/hub_GCA_031305395.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              155
Total size of examined sequences (bp):           48462280
Total number of identified SSRs:                 3750
Number of SSR containing sequences:              120
Number of sequences containing more than 1 SSR:  107
Number of SSRs present in compound formation:    485


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	281
2	1313
3	683
4	197
5	396
6	880

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	2				1									1																																																																																																																					9
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	9	8	5	11	6	7	11	12	6	2	5	7	5	2	1	1			1	1	1	1		1	1					1									1	1		1																																																																																									115
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	14	12	9	10	12	20	20	7	6	6	6	5	3	5	3	2					1						1			1	1			1		1	1			1																																																																																												148
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	2	1				1		1	1																																																																																																																										9
AC	-	-	-	175	26	11	22	10	9	1	6	5	8	8	11	5	1												1	1																																																																																																																							300
AG	-	-	-	14	8	3	4	3	3		1		1	1	4	1		3											1										1																																																																																																														48
AT	-	-	-	5	4		1		1																																																																																																																																												11
CA	-	-	-	154	38	25	6	5	3	3			1	1			1							1		1																																																																																																																											239
CG	-	-	-	18																																																																																																																																																	18
CT	-	-	-	19	11	7	8	5	6	20	6	3	6	3	8	4	4	2			1	1				1	2	1																																																																																																																									118
GA	-	-	-	22	14	6	3	2	5	11	1	6	2	2	1								1																																																																																																																														76
GC	-	-	-	1	1																																																																																																																																																2
GT	-	-	-	140	15	20	10	13	5	4	2	1	2	5	6	9	3	4	2	3	1	1	3	2	1		2		1	1	1	1	1			1												1	1	1										1	1																						1																																																																		266
TA	-	-	-	2	2		1																																																																																																																																														5
TC	-	-	-	13	8	7	4	5	1			1		3		1							1																1																																																																																																														45
TG	-	-	-	83	15	34	10	3	4	1	1	1	3	2	12	2	2	2	2	2	1	1							1	1																											1		1																																																																																										185
AAC	-	-	5	4	2			1																																																																																																																																													12
AAG	-	-	24	6	7	2	9	1		1	1	1			1		1																																																																																																																																				54
AAT	-	-	2	1	1																																																																																																																																																4
ACA	-	-	4	10	1								1																																																																																																																																								16
ACC	-	-	9																																																																																																																																																		9
ACT	-	-	2	1	1			1						1																																																																																																																																							6
AGA	-	-	16	1																																																																																																																																																	17
AGC	-	-	14	3	1																																																																																																																																																18
AGG	-	-	3		1	1																																																																																																																																															5
AGT	-	-	3																																																																																																																																																		3
ATC	-	-	2																																																																																																																																																		2
ATG	-	-	4																																																																																																																																																		4
CAA	-	-	13	4	4	9		3							1																																																																																																																																						34
CAC	-	-	3	1		2																																																																																																																																															6
CAG	-	-	27	8	7	8				1																																																																																																																																											51
CAT	-	-	1																																																																																																																																																		1
CCA	-	-	3	1	1		1																																																																																																																																														6
CCG	-	-	1																																																																																																																																																		1
CCT	-	-	4				1																																																																																																																																														5
CGA	-	-	15	1																																																																																																																																																	16
CGC	-	-	1																																																																																																																																																		1
CGG	-	-	1																																																																																																																																																		1
CGT	-	-	1																																																																																																																																																		1
CTC	-	-	3		1		1																																																																																																																																														5
CTG	-	-	13	3	3	3	2	1	1																																																																																																																																												26
CTT	-	-	19	4	1	1	1	1																																																																																																																																													27
GAA	-	-	27	11	4	1		3		2																																																																																																																																											48
GAC	-	-	4	3																																																																																																																																																	7
GAG	-	-	6	3	2		1																																																																																																																																														12
GAT	-	-	1	1																																																																																																																																																	2
GCA	-	-	11	4	2																																																																																																																																																17
GCC	-	-	2	1																																																																																																																																																	3
GCG	-	-	3																																																																																																																																																		3
GCT	-	-	21	4	1	1	1																																																																																																																																														28
GGA	-	-	3	2																																																																																																																																																	5
GGC	-	-	3	1																																																																																																																																																	4
GGT	-	-	3	1																																																																																																																																																	4
GTA	-	-														1																																																																																																																																					1
GTC	-	-	9																																																																																																																																																		9
GTG	-	-	2	2	10																																																																																																																																																14
GTT	-	-	5	5		1																																																																																																																																															11
TAA	-	-	2																																																																																																																																																		2
TAC	-	-					1																																																																																																																																														1
TAG	-	-	5		1	1		1																																																																																																																																													8
TAT	-	-	1																																																																																																																																																		1
TCA	-	-	7	3																																																																																																																																																	10
TCC	-	-	10	5	2																																																																																																																																																17
TCG	-	-	6		3																																																																																																																																																9
TCT	-	-	30	9	3	3		1																																																																																																																																													46
TGA	-	-	2	1																																																																																																																																																	3
TGC	-	-	13	6	3	2	2																																																																																																																																														26
TGG	-	-	3		1																																																																																																																																																4
TGT	-	-	2	2	1		2																																																																																																																																														7
TTA	-	-	2																																																																																																																																																		2
TTC	-	-	16	4	2	2	1		2																																																																																																																																												27
TTG	-	-	9	3		4	2	1		1			1																																																																																																																																								21
AAAC	-	1																																																																																																																																																			1
AAAG	-	1																																																																																																																																																			1
AAGC	-	2																																																																																																																																																			2
AAGG	-	2		1																																																																																																																																																	3
AAGT	-	1																																																																																																																																																			1
AATA	-	3	1																																																																																																																																																		4
ACAG	-																																																											1																																																																																									1
ACCC	-	1																																																																																																																																																			1
ACCG	-	1																																																																																																																																																			1
ACGC	-	1																																																																																																																																																			1
ACTC	-	1																																																																																																																																																			1
ACTT	-																		1																																																																																																																																		1
AGGA	-	2	1																																																																																																																																																		3
AGTC	-	1																																																																																																																																																			1
AGTG	-	1																																																																																																																																																			1
ATCA	-	1																																																																																																																																																			1
ATCT	-	1																																																																																																																																																			1
ATGT	-	2								1																																																																																																																																											3
CAAC	-		1	1																																																																																																																																																	2
CAAG	-		4																																																																																																																																																		4
CAAT	-				1																																																																																																																																																1
CACC	-	1																																																																																																																																																			1
CACT	-			1																																																																																																																				1																													2
CCCA	-	2		1																																																																																																																																																	3
CCCT	-		7			1																																																																																																																																															8
CCTC	-	1																																																																																																																																																			1
CCTG	-	1																																																																																																																																																			1
CCTT	-	2																																																																																																																																																			2
CGCC	-	1																																																																																																																																																			1
CGTC	-	2	1																																																																																																																																																		3
CTCG	-		2																																																																																																																																																		2
CTGC	-	3	2	5	16			1	1																																																																																																																																												28
CTGG	-	1																																																																																																																																																			1
CTGT	-	3		1	1			2																																			1																																																																																																										8
CTTA	-				1																																														1																																																																																																		2
CTTG	-	2																																																																																																																																																			2
CTTT	-	1																																																																																																																																																			1
GACA	-	3	1		1																																																																																																																																																5
GAGT	-	1						1																																																																																																																																													2
GATA	-																																																																																																																																																			1	1
GATT	-	1																																																																																																																																																			1
GCAA	-	3																																																																																																																																																			3
GCAG	-	1	7																																																																																																																																																		8
GCCA	-	1																																																																																																																																																			1
GCCT	-	1																																																																																																																																																			1
GCTT	-	2																																																																																																																																																			2
GGAA	-	2																																																																																																																																																			2
GGAC	-		1																																																																																																																																																		1
GGAT	-	1																																																																																																																																																			1
GGCA	-	1																																																																																																																																																			1
GTCC	-	1																																																																																																																																																			1
GTCG	-		2																																																																																																																																																		2
GTCT	-						1																																																																																																																																														1
GTTG	-	2		1																																																																																																																																																	3
GTTT	-	1																																																																																																																																																			1
TAAC	-																				1																																																																																																																																1
TACA	-	2																																																																																																																																																			2
TACT	-		1				1																																																																																																																																														2
TAGG	-	2																																																																																																																																																			2
TATC	-		1																																																																																																																																																		1
TATG	-	1																																																																																																																																																			1
TATT	-	1																																																																																																																																																			1
TCAA	-	1																																																																																																																																																			1
TCAC	-	2																																																																1																																																																																			3
TCAT	-	1																																																																																																																																																			1
TCCC	-		1																																																																																																																																																		1
TCTA	-	1																																																																																																																																																			1
TCTG	-	1	1																																																																																																																																																		2
TGAC	-	1																																																																																																																																																			1
TGAG	-			1		1					1														1																																																																																																																												4
TGAT	-	1																																																																																																																																																			1
TGCT	-		1																																																																																																																																																		1
TGGA	-	1																																																																																																																																																			1
TGTA	-	1																																																																							1																																																																												2
TGTC	-	3		3		4	1		1	3														1																																																																																																																													16
TGTT	-	1																																																																																																																																																			1
TTAC	-	4							1																																																																																																																																												5
TTAT	-	4	1	1																																																																																																																																																	6
TTTA	-	2																																																																																																																																																			2
AAAAC	4																																																																																																																																																				4
AAAAT	3																																																																																																																																																				3
AAACA	2																																																																																																																																																				2
AAAGC	2																																																																																																																																																				2
AAATA	2																																																																																																																																																				2
AACAA	3																																																																																																																																																				3
AACGC	1																																																																																																																																																				1
AAGAC	1																																																																																																																																																				1
AAGCC	1																																																																																																																																																				1
AAGTC	1																																																																																																																																																				1
AATAA	1																																																																																																																																																				1
AATAC			1																																																																																																																																																		1
AATGA	1																																																																																																																																																				1
ACAAC	6																																																																																																																																																				6
ACACA	3																																																																																																																																																				3
ACACG	1																																																																																																																																																				1
ACACT	1																																																																																																																																																				1
ACAGC	1																																																																																																																																																				1
ACCCG	1																																																																																																																																																				1
ACCCT	1	1																																																																																																																																																			2
ACGCT	1																																																																																																																																																				1
ACTTC	1																																																																																																																																																				1
ACTTG	3																																																																																																																																																				3
AGCAC	1																																																																																																																																																				1
AGCAG	1																																																																																																																																																				1
AGCGA	1																																																																																																																																																				1
AGCTC			1																																																																																																																																																		1
AGGTC	1																																																																																																																																																				1
AGTAC	3																																																																																																																																																				3
AGTCC	1																																																																																																																																																				1
AGTCG	3																																																																																																																																																				3
AGTGT	2																																																																																																																																																				2
ATAAA	1																																																																																																																																																				1
ATATC	1																																																																																																																																																				1
ATATG	1																																																																																																																																																				1
ATCGA	1																																																																																																																																																				1
ATCGC	1																																																																																																																																																				1
ATGCA	1																																																																																																																																																				1
ATGGT	1																																																																																																																																																				1
ATTCC	1																																																																																																																																																				1
ATTGT		1	1																																																																																																																																																		2
ATTTG	1																																																																																																																																																				1
CAAAA	2																																																																																																																																																				2
CAAAG	1																																																																																																																																																				1
CAAGG	1																																																																																																																																																				1
CAAGT	1																																																																																																																																																				1
CAATA	2																																																																																																																																																				2
CACAC	2																																																																																																																																																				2
CACAG	1																																																																																																																																																				1
CACAT	5																																																																																																																																																				5
CACCC	2																																																																																																																																																				2
CACCT	1																																																																																																																																																				1
CACTG	1																																																																																																																																																				1
CAGCA	2																																																																																																																																																				2
CAGCT		1																																																																																																																																																			1
CAGTC	1																																																																																																																																																				1
CATGA	1																																																																																																																																																				1
CATGG	1																																																																																																																																																				1
CATGT	2																																																																																																																																																				2
CCAAA		1																																																																																																																																																			1
CCAAG	1																																																																																																																																																				1
CCACA	1																																																																																																																																																				1
CCAGT	1																																																																																																																																																				1
CCATG	1																																																																																																																																																				1
CCCAC		25	1																																																																																																																																																		26
CCCTC	1																																																																																																																																																				1
CCGTG	1																																																																																																																																																				1
CCTCC	2																																																																																																																																																				2
CCTGA	1																																																																																																																																																				1
CGAAG	4																																																																																																																																																				4
CGACT			2	1	1	1	1																																																																																																																																														6
CGAGT	2	20	4	6																																																																																																																																																	32
CGATT	1																																																																																																																																																				1
CGCAG	2																																																																																																																																																				2
CGCAT			1																																																																																																																																																		1
CGGCT	1																																																																																																																																																				1
CGTCT	1																																																																																																																																																				1
CTCAA	1																																																																																																																																																				1
CTCAC	1																																																																																																																																																				1
CTCCC	1																																																																																																																																																				1
CTCGA	2	7	3	9	2																																																																																																																																																23
CTCTT	1																																																																																																																																																				1
CTGTA	2																																																																																																																																																				2
CTTCA	2																																																																																																																																																				2
CTTCT	3																																																																																																																																																				3
CTTGA		1																																																																																																																																																			1
CTTGT	1																																																																																																																																																				1
CTTTT	1																																																																																																																																																				1
GAAAA	1																																																																																																																																																				1
GAAGA	3																																																																																																																																																				3
GAATA	1																																																																																																																																																				1
GACTC				3	1																																																																																																																																																4
GAGAA	2																																																																																																																																																				2
GAGCT	1	1																																																																																																																																																			2
GAGGA	1																																																																																																																																																				1
GAGTA	1																																																																																																																																																				1
GAGTT		1																																																																																																																																																			1
GATGT	1																																																																																																																																																				1
GATTC	1																																																																																																																																																				1
GCACA	2																																																																																																																																																				2
GCATT	2																																																																																																																																																				2
GCCAC	1																																																																																																																																																				1
GCGAG	1																																																																																																																																																				1
GCGAT	1	1																																																																																																																																																			2
GCTCT	1																																																																																																																																																				1
GCTGA	2																																																																																																																																																				2
GCTTC	3																																																																																																																																																				3
GGAAG	1																																																																																																																																																				1
GGACT	1																																																																																																																																																				1
GGCCA	1																																																																																																																																																				1
GGCTG	1																																																																																																																																																				1
GGGGA	1																																																																																																																																																				1
GGTTT																																												1																																																																																																									1
GTACA	1																																																																																																																																																				1
GTACG	1	2																																																																																																																																																			3
GTACT	5																																																																																																																																																				5
GTCGA		1																																																																																																																																																			1
GTGCA		1																																																																																																																																																			1
GTGGG	1	9																																																																																																																																																			10
GTGGT	1																																																																																																																																																				1
GTGTT	1																																																																																																																																																				1
GTTGA	11																																																																																																																																																				11
GTTGC	1																																																																																																																																																				1
GTTGT	1																																																																																																																																																				1
GTTTC	1																																																																																																																																																				1
GTTTT	1																																																																																																																																																				1
TAATC		1																																																																																																																																																			1
TACAG	1																																																																																																																																																				1
TACCA	1																																																																																																																																																				1
TACGC	1																																																																																																																																																				1
TACGT	1																																																																																																																																																				1
TATTG						1																																																																																																																																															1
TCAAC		1	1																																																																																																																																																		2
TCACC	1																																																																																																																																																				1
TCACT	1																																																																																																																																																				1
TCAGC	1																																																																																																																																																				1
TCCAC	1																																																																																																																																																				1
TCCAG		1																																																																																																																																																			1
TCCCC	1																																																																																																																																																				1
TCCGT	1																																																																																																																																																				1
TCCTC	1																																																																																																																																																				1
TCGAC		1																																																																																																																																																			1
TCGAT	1																																																																																																																																																				1
TCGGA	1																																																																																																																																																				1
TCGTA						3		2	3	1	3			1				1																																																																																																																																			14
TCTTG	1																																																																																																																																																				1
TGAAA	2																																																																																																																																																				2
TGAAT	1																																																																																																																																																				1
TGAGA	1																																																																																																																																																				1
TGCAC	1																																																																																																																																																				1
TGCAG	2																																																																																																																																																				2
TGCAT	1																																																																																																																																																				1
TGCTG	2																																																																																																																																																				2
TGGAT	1																																																																																																																																																				1
TGGCT	1																																																																																																																																																				1
TGGGG	1																																																																																																																																																				1
TGGTG	31																																																																																																																																																				31
TGTAA	1																																																																																																																																																				1
TGTAC	2																																																																																																																																																				2
TGTGC	1																																																																																																																																																				1
TGTGT	1																																																																																																																																																				1
TTATA	1																																																																																																																																																				1
TTGAG		1																																																																																																																																																			1
TTGCA	2																																																																																																																																																				2
TTGCG	1																																																																																																																																																				1
TTGTG	4																																																																																																																																																				4
TTTGC	1																																																																																																																																																				1
TTTGT	2																																																																																																																																																				2
TTTTA		1																																																																																																																																																			1
TTTTC	4																																																																																																																																																				4
TTTTG	4																																																																																																																																																				4
AAAAAT	1																																																																																																																																																				1
AAAATA	1																																																																																																																																																				1
AAAATT	1																																																																																																																																																				1
AAACAA	1																																																																																																																																																				1
AAATTG	1																																																																																																																																																				1
AACAGC	1																																																																																																																																																				1
AAGAGC		1																																																																																																																																																			1
AAGCAG	1																																																																																																																																																				1
AAGCTC	1																																																																																																																																																				1
AAGGAG	1																																																																																																																																																				1
AAGTGC	1																																																																																																																																																				1
AAGTTA	1																																																																																																																																																				1
AAGTTG	2																																																																																																																																																				2
AATAAA	1																																																																																																																																																				1
AATTTT	1																																																																																																																																																				1
ACAAGT		1																																																																																																																																																			1
ACACAA	1																																																																																																																																																				1
ACAGGA	1																																																																																																																																																				1
ACAGTG	1																																																																																																																																																				1
ACATCT	1																																																																																																																																																				1
ACATGT	1																																																																																																																																																				1
ACCACG	1																																																																																																																																																				1
ACCAGG	1																																																																																																																																																				1
ACCATG	1																																																																																																																																																				1
ACCTCC	1																																																																																																																																																				1
ACCTGT	1																																																																																																																																																				1
ACGACC		1																																																																																																																																																			1
ACGACT	42	4																																																																																																																																																			46
ACGAGT	1																																																																																																																																																				1
ACGCCA	1	1																																																																																																																																																			2
ACGGCT	1																																																																																																																																																				1
ACTACG	1																																																																																																																																																				1
ACTCAG			1																																																																																																																																																		1
ACTGTC	1																																																																																																																																																				1
AGAACA	1																																																																																																																																																				1
AGACAC	1																																																																																																																																																				1
AGAGCA	3		5																																																																																																																																																		8
AGATAG		1																																																																																																																																																			1
AGCAGA	2																																																																																																																																																				2
AGCAGG	2	1																																																																																																																																																			3
AGCAGT	1																																																																																																																																																				1
AGCATT			1																																																																																																																																																		1
AGCCAC	1																																																																																																																																																				1
AGCCGC	1																																																																																																																																																				1
AGCGCT	1																																																																																																																																																				1
AGCTAC	1																																																																																																																																																				1
AGCTAT	1																																																																																																																																																				1
AGGACA	1																																																																																																																																																				1
AGGACC	2																																																																																																																																																				2
AGTGAA	1																																																																																																																																																				1
AGTGGT	1																																																																																																																																																				1
ATAAAA	1																																																																																																																																																				1
ATCAGA	1																																																																																																																																																				1
ATCCTC	1																																																																																																																																																				1
ATCGCG	1																																																																																																																																																				1
ATCGTC	1																																																																																																																																																				1
ATCTAG	1																																																																																																																																																				1
ATGAAG	1																																																																																																																																																				1
ATGTGA	1																																																																																																																																																				1
ATTTAC	2																																																																																																																																																				2
ATTTGA	2																																																																																																																																																				2
ATTTGT	1																																																																																																																																																				1
CAAAAA	1																																																																																																																																																				1
CAACAG	1	1																																																																																																																																																			2
CAACGC		1	1																																																																																																																																																		2
CAACTT	1																																																																																																																																																				1
CAAGAC	1																																																																																																																																																				1
CAAGCA	1																																																																																																																																																				1
CAAGGC	1																																																																																																																																																				1
CAATAC	2																																																																																																																																																				2
CAATTG	1																																																																																																																																																				1
CAATTT	2																																																																																																																																																				2
CACAAA	5																																																																																																																																																				5
CACCAG	2	1																																																																																																																																																			3
CAGATG	1																																																																																																																																																				1
CAGCAA	3	2	1						1																																																																																																																																												7
CAGCCT	1																																																																																																																																																				1
CAGGAA		1																																																																																																																																																			1
CAGGAG	2		1																																																																																																																																																		3
CAGTGG	1																																																																																																																																																				1
CAGTTG	1																																																																																																																																																				1
CATCAG	1																																																																																																																																																				1
CATCTT	1																																																																																																																																																				1
CATGTA	1																																																																																																																																																				1
CATTAT	1																																																																																																																																																				1
CCAAAG	1																																																																																																																																																				1
CCACCT	1																																																																																																																																																				1
CCAGCA				1																																																																																																																																																	1
CCAGGT	1																																																																																																																																																				1
CCCAGA				1																																																																																																																																																	1
CCCCAC	1																																																																																																																																																				1
CCGACT	1																																																																																																																																																				1
CCGATG	1																																																																																																																																																				1
CCGGAT	1																																																																																																																																																				1
CCTCCA	1																																																																																																																																																				1
CCTCGA		1																																																																																																																																																			1
CCTGCT	1																																																																																																																																																				1
CCTTAA	1																																																																																																																																																				1
CCTTGG	1																																																																																																																																																				1
CGAAGG	1																																																																																																																																																				1
CGAAGT	1																																																																																																																																																				1
CGACAA	1		1																																																																																																																																																		2
CGACGC	1																																																																																																																																																				1
CGACTG	1																																																																																																																																																				1
CGAGAA	1																																																																																																																																																				1
CGAGAT	4		1																																																																																																																																																		5
CGAGGT	1																																																																																																																																																				1
CGAGTT	1																																																																																																																																																				1
CGATCT	1																																																																																																																																																				1
CGATGA	1	1																																																																																																																																																			2
CGATGT	2																																																																																																																																																				2
CGATTT	1																																																																																																																																																				1
CGCAAC	1																																																																																																																																																				1
CGCAGT	1																																																																																																																																																				1
CGCCAA	1		2	1	2	1	1		1																																																																																																																																												9
CGCCAC	1																																																																																																																																																				1
CGCTCA		23	14	6																																																																																																																																																	43
CGGAGT	1																																																																																																																																																				1
CGGCAT	1																																																																																																																																																				1
CGGCTC		1																																																																																																																																																			1
CGGTGC	1																																																																																																																																																				1
CGTAGA	7																																																																																																																																																				7
CGTAGT	38	5	1																																																																																																																																																		44
CGTCAA	1																																																																																																																																																				1
CGTGGT	1																																																																																																																																																				1
CGTTGA	1																																																																																																																																																				1
CGTTGC	1																																																																																																																																																				1
CTACGT	75																																																																																																																																																				75
CTCAAT	1																																																																																																																																																				1
CTCAGA	1																																																																																																																																																				1
CTCCAA			1																																																																																																																																																		1
CTCCTG		1							1																																																																																																																																												2
CTCCTT	2																																																																																																																																																				2
CTCGTC	1																																																																																																																																																				1
CTGAAG	1																																																																																																																																																				1
CTGAGT	1																																																																																																																																																				1
CTGCGT	1																																																																																																																																																				1
CTGCTC	1																																																																																																																																																				1
CTGCTT	1																																																																																																																																																				1
CTGGAG	1																																																																																																																																																				1
CTGGCA	1	1																																																																																																																																																			2
CTGTCA	1																																																																																																																																																				1
CTGTCG	1																																																																																																																																																				1
CTGTTC	1		1																																																																																																																																																		2
CTGTTG	1	1										1																																																																																																																																									3
CTTCAT	1																																																																																																																																																				1
CTTCTA		1																																																																																																																																																			1
CTTCTG	1																																																																																																																																																				1
CTTGCC	2																																																																																																																																																				2
GAAATG	1																																																																																																																																																				1
GAACGA	1																																																																																																																																																				1
GAAGAC	1																																																																																																																																																				1
GAAGAG	2																																																																																																																																																				2
GAAGCA	1																																																																																																																																																				1
GAAGCC	2																																																																																																																																																				2
GAAGTG	1																																																																																																																																																				1
GACGAA	1																																																																																																																																																				1
GACGAG	1																																																																																																																																																				1
GACGCT	2																																																																																																																																																				2
GACTAC	1		1																																																																																																																																																		2
GACTCC			1																																																																																																																																																		1
GAGCTG	1																																																																																																																																																				1
GAGCTT	1																																																																																																																																																				1
GAGGCT	3																																																																																																																																																				3
GAGTAC	1																																																																																																																																																				1
GAGTCC	2																																																																																																																																																				2
GAGTCT		1																																																																																																																																																			1
GAGTGA	1																																																																																																																																																				1
GAGTGC	1																																																																																																																																																				1
GATCCA	1																																																																																																																																																				1
GATCGA	2																																																																																																																																																				2
GATCTC	12		4																																																																																																																																																		16
GATGAC	3																																																																																																																																																				3
GCAACA	1	1																																																																																																																																																			2
GCACAC	1																																																																																																																																																				1
GCACCA			1																																																																																																																																																		1
GCAGAC	1																																																																																																																																																				1
GCAGCT	1																																																																																																																																																				1
GCAGGA	1		1																																																																																																																																																		2
GCAGGG	1																																																																																																																																																				1
GCAGTA			1																																																																																																																																																		1
GCATCT	1																																																																																																																																																				1
GCATTC	1																																																																																																																																																				1
GCCACC	1																																																																																																																																																				1
GCCACT							1																																																																																																																																														1
GCCATC	1																																																																																																																																																				1
GCCATT	5	3	1	1																																																																																																																																																	10
GCCGAA	11																																																																																																																																																				11
GCCGGA	26																																																																																																																																																				26
GCCGTT	1																																																																																																																																																				1
GCCTTG	2																																																																																																																																																				2
GCGATG	1																																																																																																																																																				1
GCTACC		1																																																																																																																																																			1
GCTCAA			1																																																																																																																																																		1
GCTCCA	3																																																																																																																																																				3
GCTCGC	29	1																																																																																																																																																			30
GCTGAG	1																																																																																																																																																				1
GCTGCA	1																																																																																																																																																				1
GCTGGA	1																																																																																																																																																				1
GCTGTA		1																																																																																																																																																			1
GCTGTT	1																																																																																																																																																				1
GCTTCA	1																																																																																																																																																				1
GCTTGA	1																																																																																																																																																				1
GCTTGT		1																																																																																																																																																			1
GGACTC	1																																																																																																																																																				1
GGAGCA					1																																																																																																																																																1
GGAGCT	3																																																																																																																																																				3
GGAGTC	1																																																																																																																																																				1
GGCAAG		1																																																																																																																																																			1
GGCAAT	50	11	4	4		1																																																																																																																																															70
GGCATT	1																																																																																																																																																				1
GGCGAT	2																																																																																																																																																				2
GGCGTC	1																																																																																																																																																				1
GGGCAA	3																																																																																																																																																				3
GGTGAA	1																																																																																																																																																				1
GGTGCA	1																																																																																																																																																				1
GGTTTA		1																																																																																																																																																			1
GGTTTT	1																																																																																																																																																				1
GTACAT	1																																																																																																																																																				1
GTACCC	1																																																																																																																																																				1
GTACTC	1																																																																																																																																																				1
GTAGCA	1																																																																																																																																																				1
GTAGCT	2																																																																																																																																																				2
GTAGTC										1																																																																																																																																											1
GTCACA	1																																																																																																																																																				1
GTCATT		2																																																																																																																																																			2
GTCCCA	1																																																																																																																																																				1
GTCGGA	3																																																																																																																																																				3
GTCGTG	33	4																																																																																																																																																			37
GTCTGA	1																																																																																																																																																				1
GTGCTG		2		1	3																																																																																																																																																6
GTGGCT	1																																																																																																																																																				1
GTTCGA		6																																																																																																																																																			6
GTTCGT	1																																																																																																																																																				1
GTTGGC	2	3			1						3		2		1																																																																																																																																						12
GTTGTC	1																																																																																																																																																				1
GTTGTG	1																																																																																																																																																				1
TAAAGA	1																																																																																																																																																				1
TACAGG	1																																																																																																																																																				1
TACATG	3																																																																																																																																																				3
TACATT	1																																																																																																																																																				1
TATAGT	1																																																																																																																																																				1
TATTTT	1																																																																																																																																																				1
TCAAAG	1																																																																																																																																																				1
TCAACA	1																																																																																																																																																				1
TCAACT	1																																																																																																																																																				1
TCACGG			1																																																																																																																																																		1
TCACTT		1																																																																																																																																																			1
TCAGAC			1																																																																																																																																																		1
TCAGAT	1																																																																																																																																																				1
TCAGCC		1																																																																																																																																																			1
TCATGT	1																																																																																																																																																				1
TCCTCG	1																																																																																																																																																				1
TCCTGC	1				1																																																																																																																																																2
TCCTGT		1																																																																																																																																																			1
TCGAAC		1		1																																																																																																																																																	2
TCGAGC	1																																																																																																																																																				1
TCGCAA	1																																																																																																																																																				1
TCGCGC	2																																																																																																																																																				2
TCGGAA	1																																																																																																																																																				1
TCGGGA		1																																																																																																																																																			1
TCGTAG	8	1	1																																																																																																																																																		10
TCGTCA	4																																																																																																																																																				4
TCGTGG	1																																																																																																																																																				1
TCGTGT		1																																																																																																																																																			1
TCTCGC	1																																																																																																																																																				1
TCTGTG	1																																																																																																																																																				1
TCTTCA	1																																																																																																																																																				1
TCTTCG	1																																																																																																																																																				1
TCTTGA	1																																																																																																																																																				1
TCTTGC	1																																																																																																																																																				1
TGAAGT	1																																																																																																																																																				1
TGACCC	1																																																																																																																																																				1
TGACGA	4																																																																																																																																																				4
TGACGT	1																																																																																																																																																				1
TGATGC	1																																																																																																																																																				1
TGCACT	1	1																																																																																																																																																			2
TGCCAT	1																																																																																																																																																				1
TGCGTC	1																																																																																																																																																				1
TGCTAC	1																																																																																																																																																				1
TGCTGG	11																																																																																																																																																				11
TGCTGT	2	1																																																																																																																																																			3
TGGAGC	1																																																																																																																																																				1
TGGCGT	1																																																																																																																																																				1
TGGTCG	1																																																																																																																																																				1
TGGTGC	1																																																																																																																																																				1
TGTACT		1																																																																																																																																																			1
TGTGCA	1																																																																																																																																																				1
TTATTT	1																																																																																																																																																				1
TTCGGC	3																																																																																																																																																				3
TTCTCG			1						1																																																																																																																																												2
TTGAAA		1																																																																																																																																																			1
TTGCAA	1																																																																																																																																																				1
TTGCCA	29	3	1				1																																																																																																																																														34
TTGGCT	1																																																																																																																																																				1
TTGGGT	1																																																																																																																																																				1
TTGTCG	2																																																																																																																																																				2
TTGTCT	1																																																																																																																																																				1
TTGTGA	1																																																																																																																																																				1
TTGTTC	1	1																																																																																																																																																			2
TTGTTT	1																																																																																																																																																				1
TTTATT	1																																																																																																																																																				1
TTTCAA		1																																																																																																																																																			1
TTTGAC	1																																																																																																																																																				1
TTTGTG	1																																																																																																																																																				1
TTTTAG	1																																																																																																																																																				1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	4	1			1	1		1	1					1																																																																																																																					18
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	21	17	15	23	26	27	18	18	12	8	10	10	10	5	3	1			1	2	1	1		1	1	1			1	2			1		1	1			2	1		1																																																																																									263
AC/GT	-	-	-	552	94	90	48	31	21	9	9	7	14	16	29	16	7	6	4	5	2	2	3	3	1	1	2		3	3	1	1	1			1												1	1	1							1		1	1	1																						1																																																																		990
AG/CT	-	-	-	68	41	23	19	15	15	31	8	10	9	9	13	6	4	5			1	1	2			1	2	1	1										2																																																																																																														287
AT/AT	-	-	-	7	6		2		1																																																																																																																																												16
CG/CG	-	-	-	19	1																																																																																																																																																20
AAC/GTT	-	-	38	28	8	14	4	5		1			2		1																																																																																																																																						101
AAG/CTT	-	-	132	35	17	9	11	6	2	3	1	1			1		1																																																																																																																																				219
AAT/ATT	-	-	7	1	1																																																																																																																																																9
ACC/GGT	-	-	23	5	12	2	1																																																																																																																																														43
ACG/CGT	-	-	35	4	3																																																																																																																																																42
ACT/AGT	-	-	10	1	2	1	1	2						1		1																																																																																																																																					19
AGC/CTG	-	-	99	28	17	14	5	1	1	1																																																																																																																																											166
AGG/CCT	-	-	29	10	6	1	3																																																																																																																																														49
ATC/ATG	-	-	17	5																																																																																																																																																	22
CCG/CGG	-	-	11	2																																																																																																																																																	13
AAAC/GTTT	-	3																																																																																																																																																			3
AAAG/CTTT	-	2																																																																																																																																																			2
AAAT/ATTT	-	10	2	1																																																																																																																																																	13
AACC/GGTT	-	2	1	2																																																																																																																																																	5
AACT/AGTT	-																				1																																																																																																																																1
AAGC/CTTG	-	9	5																																																																																																																																																		14
AAGG/CCTT	-	8	1	1																																																																																																																																																	10
AAGT/ACTT	-	5	1		1		1		1										1																																1																																																																																																		11
AATC/ATTG	-	4			1																																																																																																																																																5
AATG/ATTC	-	1																																																																																																																																																			1
ACAG/CTGT	-	10	2	4	2	4	2	2	1	3														1																			1																	1																																																																																									33
ACAT/ATGT	-	6								1																																																															1																																																																												8
ACCC/GGGT	-	4		1																																																																																																																																																	5
ACCG/CGGT	-	1	2																																																																																																																																																		3
ACCT/AGGT	-	2																																																																																																																																																			2
ACGC/CGTG	-	1																																																																																																																																																			1
ACGG/CCGT	-	3	2																																																																																																																																																		5
ACTC/AGTG	-	5		2		1		1			1														1																																									1																																																						1																													13
ACTG/AGTC	-	2																																																																																																																																																			2
AGAT/ATCT	-	2	1																																																																																																																																																	1	4
AGCC/CTGG	-	2																																																																																																																																																			2
AGCG/CGCT	-		2																																																																																																																																																		2
AGGC/CCTG	-	7	9	5	16			1	1																																																																																																																																												39
AGGG/CCCT	-	1	8			1																																																																																																																																															10
ATCC/ATGG	-	2																																																																																																																																																			2
CCCG/CGGG	-	1																																																																																																																																																			1
AAAAC/GTTTT	18																																																																																																																																																				18
AAAAG/CTTTT	6																																																																																																																																																				6
AAAAT/ATTTT	7	1																																																																																																																																																			8
AAACC/GGTTT		1																																										1																																																																																																									2
AAACG/CGTTT	1																																																																																																																																																				1
AAAGC/CTTTG	4																																																																																																																																																				4
AAATC/ATTTG	1																																																																																																																																																				1
AAATG/ATTTC	3																																																																																																																																																				3
AACAC/GTGTT	16																																																																																																																																																				16
AACGC/CGTTG	3																																																																																																																																																				3
AACGG/CCGTT	1																																																																																																																																																				1
AACGT/ACGTT	1																																																																																																																																																				1
AACTC/AGTTG	12	3	1																																																																																																																																																		16
AAGAC/CTTGT	3																																																																																																																																																				3
AAGAG/CTCTT	9																																																																																																																																																				9
AAGCC/CTTGG	3																																																																																																																																																				3
AAGCG/CGCTT	8																																																																																																																																																				8
AAGGC/CCTTG	1																																																																																																																																																				1
AAGGG/CCCTT	1																																																																																																																																																				1
AAGTC/ACTTG	5	1																																																																																																																																																			6
AAGTG/ACTTC	4																																																																																																																																																				4
AATAC/ATTGT	2	1	2			1																																																																																																																																															6
AATAG/ATTCT	1																																																																																																																																																				1
AATAT/ATATT	1																																																																																																																																																				1
AATCC/ATTGG	1																																																																																																																																																				1
AATCG/ATTCG	4																																																																																																																																																				4
AATCT/AGATT		1																																																																																																																																																			1
AATGC/ATTGC	6																																																																																																																																																				6
AATGG/ATTCC	1																																																																																																																																																				1
AATGT/ACATT	1																																																																																																																																																				1
AATTC/AATTG	1																																																																																																																																																				1
ACACC/GGTGT	35																																																																																																																																																				35
ACACG/CGTGT	1																																																																																																																																																				1
ACACT/AGTGT	3																																																																																																																																																				3
ACAGC/CTGTG	10																																																																																																																																																				10
ACAGT/ACTGT	14																																																																																																																																																				14
ACATC/ATGTG	6																																																																																																																																																				6
ACATG/ATGTC	3																																																																																																																																																				3
ACCAT/ATGGT	2																																																																																																																																																				2
ACCCC/GGGGT	4	34	1																																																																																																																																																		39
ACCCG/CGGGT	1																																																																																																																																																				1
ACCCT/AGGGT	1	1																																																																																																																																																			2
ACCGT/ACGGT	1	2																																																																																																																																																			3
ACCTC/AGGTG	3																																																																																																																																																				3
ACCTG/AGGTC	2																																																																																																																																																				2
ACGAG/CGTCT	1																																																																																																																																																				1
ACGAT/ATCGT						3		2	3	1	3			1				1																																																																																																																																			14
ACGCC/CGTGG	1																																																																																																																																																				1
ACGCT/AGCGT	2																																																																																																																																																				2
ACGGC/CCGTG	1																																																																																																																																																				1
ACTCC/AGTGG	1																																																																																																																																																				1
ACTCG/AGTCG	7	29	9	19	4	1	1																																																																																																																																														70
ACTCT/AGAGT	1																																																																																																																																																				1
ACTGC/AGTGC	4	1																																																																																																																																																			5
ACTGG/AGTCC	4	1																																																																																																																																																			5
AGAGC/CTCTG	2																																																																																																																																																				2
AGAGG/CCTCT	2																																																																																																																																																				2
AGATG/ATCTC	1																																																																																																																																																				1
AGCCC/CTGGG	1																																																																																																																																																				1
AGCCG/CGGCT	1																																																																																																																																																				1
AGCGC/CGCTG	2																																																																																																																																																				2
AGCTC/AGCTG	4	2	1																																																																																																																																																		7
AGGCC/CCTGG	1																																																																																																																																																				1
AGGCG/CCTCG	1																																																																																																																																																				1
AGGGG/CCCCT	6																																																																																																																																																				6
ATATC/ATATG	2																																																																																																																																																				2
ATCCG/ATCGG	1																																																																																																																																																				1
ATCGC/ATGCG	2	1	1																																																																																																																																																		4
ATGCC/ATGGC	2																																																																																																																																																				2
AAAAAC/GTTTTT	3																																																																																																																																																				3
AAAAAT/ATTTTT	7																																																																																																																																																				7
AAAACC/GGTTTT	1																																																																																																																																																				1
AAAACT/AGTTTT	1																																																																																																																																																				1
AAAATT/AATTTT	2																																																																																																																																																				2
AAACAC/GTGTTT	7																																																																																																																																																				7
AAACCC/GGGTTT	1																																																																																																																																																				1
AAACCT/AGGTTT		1																																																																																																																																																			1
AAAGAC/CTTTGT	1																																																																																																																																																				1
AAAGAT/ATCTTT	1																																																																																																																																																				1
AAAGCC/CTTTGG	2																																																																																																																																																				2
AAAGTC/ACTTTG	2																																																																																																																																																				2
AAAGTG/ACTTTC	1	1																																																																																																																																																			2
AAAGTT/AACTTT	1																																																																																																																																																				1
AAATAC/ATTTGT	1																																																																																																																																																				1
AAATCG/ATTTCG	1																																																																																																																																																				1
AAATGG/ATTTCC	1																																																																																																																																																				1
AAATGT/ACATTT	3																																																																																																																																																				3
AAATTC/AATTTG	2																																																																																																																																																				2
AAATTG/AATTTC	3	2																																																																																																																																																			5
AACAAG/CTTGTT	2	1																																																																																																																																																			3
AACACG/CGTGTT	1	1																																																																																																																																																			2
AACAGC/CTGTTG	10	6	1						1			1																																																																																																																																									19
AACAGG/CCTGTT	2	2	1																																																																																																																																																		5
AACATC/ATGTTG	1																																																																																																																																																				1
AACATG/ATGTTC	1																																																																																																																																																				1
AACCAC/GGTTGT	1																																																																																																																																																				1
AACCGC/CGGTTG	1																																																																																																																																																				1
AACCTT/AAGGTT	1																																																																																																																																																				1
AACGAC/CGTTGT	4		1																																																																																																																																																		5
AACGAG/CGTTCT	2		1						1																																																																																																																																												4
AACGCC/CGTTGG	5	5	3	1	3	1	1		1		3		2		1																																																																																																																																						26
AACGGC/CCGTTG	2																																																																																																																																																				2
AACGTC/ACGTTG	3																																																																																																																																																				3
AACTAT/AGTTAT	1																																																																																																																																																				1
AACTCC/AGTTGG			1																																																																																																																																																		1
AACTCG/AGTTCG	1	7		1																																																																																																																																																	9
AACTGC/AGTTGC	1																																																																																																																																																				1
AACTTC/AAGTTG	5																																																																																																																																																				5
AAGACC/CTTGGT	1																																																																																																																																																				1
AAGACG/CGTCTT	3																																																																																																																																																				3
AAGAGC/CTCTTG	4	1	5																																																																																																																																																		10
AAGAGG/CCTCTT	2																																																																																																																																																				2
AAGATC/ATCTTG	1																																																																																																																																																				1
AAGATG/ATCTTC	4																																																																																																																																																				4
AAGCAC/CTTGTG	1	1																																																																																																																																																			2
AAGCAG/CTGCTT	6																																																																																																																																																				6
AAGCCG/CGGCTT	16																																																																																																																																																				16
AAGCTC/AGCTTG	3		1																																																																																																																																																		4
AAGCTG/AGCTTC	2																																																																																																																																																				2
AAGGAC/CCTTGT	1																																																																																																																																																				1
AAGGAG/CCTTCT	3																																																																																																																																																				3
AAGGCC/CCTTGG	4																																																																																																																																																				4
AAGGCG/CCTTCG	1																																																																																																																																																				1
AAGGGC/CCCTTG	5	1																																																																																																																																																			6
AAGGTG/ACCTTC	1																																																																																																																																																				1
AAGTAC/ACTTGT		2																																																																																																																																																			2
AAGTAG/ACTTCT		1																																																																																																																																																			1
AAGTCG/ACTTCG	1																																																																																																																																																				1
AAGTGC/ACTTGC	2	1																																																																																																																																																			3
AAGTGG/ACTTCC	1																																																																																																																																																				1
AATACC/ATTGGT	2																																																																																																																																																				2
AATCAC/ATTGTG	1																																																																																																																																																				1
AATCAG/ATTCTG	1																																																																																																																																																				1
AATCGC/ATTGCG	1																																																																																																																																																				1
AATCGG/ATTCCG	1																																																																																																																																																				1
AATCTC/AGATTG	1																																																																																																																																																				1
AATCTG/AGATTC	1																																																																																																																																																				1
AATGAC/ATTGTC		2																																																																																																																																																			2
AATGAT/ATCATT	1																																																																																																																																																				1
AATGCC/ATTGGC	1																																																																																																																																																				1
AATGCG/ATTCGC	1																																																																																																																																																				1
AATGCT/AGCATT			1																																																																																																																																																		1
AATGGC/ATTGCC	85	17	6	5		1	1																																																																																																																																														115
AATGTG/ACATTC	1																																																																																																																																																				1
AATTGC/AATTGC	2																																																																																																																																																				2
ACACAG/CTGTGT	2																																																																																																																																																				2
ACACGC/CGTGTG	1																																																																																																																																																				1
ACAGCC/CTGTGG	2																																																																																																																																																				2
ACAGCG/CGCTGT	1																																																																																																																																																				1
ACAGCT/AGCTGT	3	1																																																																																																																																																			4
ACAGGT/ACCTGT	2																																																																																																																																																				2
ACAGTC/ACTGTG	1																																																																																																																																																				1
ACAGTG/ACTGTC	3																																																																																																																																																				3
ACATCG/ATGTCG	2																																																																																																																																																				2
ACATCT/AGATGT	1																																																																																																																																																				1
ACATGC/ATGTGC	1																																																																																																																																																				1
ACATGT/ACATGT	6																																																																																																																																																				6
ACCACG/CGTGGT	37	5																																																																																																																																																			42
ACCACT/AGTGGT	1																																																																																																																																																				1
ACCAGC/CTGGTG	14	3	1	2	3																																																																																																																																																23
ACCAGG/CCTGGT	3																																																																																																																																																				3
ACCATG/ATGGTC	1																																																																																																																																																				1
ACCCAG/CTGGGT				1																																																																																																																																																	1
ACCCCC/GGGGGT	1																																																																																																																																																				1
ACCCGT/ACGGGT	1																																																																																																																																																				1
ACCCTG/AGGGTC	1																																																																																																																																																				1
ACCGCC/CGGTGG	2																																																																																																																																																				2
ACCGCT/AGCGGT		1																																																																																																																																																			1
ACCGGC/CCGGTG	1																																																																																																																																																				1
ACCGTG/ACGGTC			1																																																																																																																																																		1
ACCTCC/AGGTGG	3																																																																																																																																																				3
ACCTCG/AGGTCG	1	1																																																																																																																																																			2
ACCTGC/AGGTGC	1																																																																																																																																																				1
ACCTGG/AGGTCC	1																																																																																																																																																				1
ACGACT/AGTCGT	90	10	3							1																																																																																																																																											104
ACGAGG/CCTCGT	3																																																																																																																																																				3
ACGAGT/ACTCGT	3																																																																																																																																																				3
ACGATG/ATCGTC	13	1																																																																																																																																																			14
ACGCAG/CGTCTG	3																																																																																																																																																				3
ACGCCG/CGGCGT	2																																																																																																																																																				2
ACGCTC/AGCGTG		23	14	6																																																																																																																																																	43
ACGCTG/AGCGTC	2																																																																																																																																																				2
ACGGCT/AGCCGT	1																																																																																																																																																				1
ACGTAG/ACGTCT	82																																																																																																																																																				82
ACTCAG/AGTCTG	3	1	2																																																																																																																																																		6
ACTCCG/AGTCGG	6		1																																																																																																																																																		7
ACTCGC/AGTGCG	1																																																																																																																																																				1
ACTCGG/AGTCCG	3																																																																																																																																																				3
ACTCTC/AGAGTG	1																																																																																																																																																				1
ACTGCC/AGTGGC	1						1																																																																																																																																														2
ACTGCG/AGTCGC	2																																																																																																																																																				2
ACTGCT/AGCAGT	3		1																																																																																																																																																		4
ACTGGC/AGTGCC	1	1																																																																																																																																																			2
ACTGGG/AGTCCC	1																																																																																																																																																				1
AGAGAT/ATCTCT		1																																																																																																																																																			1
AGAGCG/CGCTCT	1																																																																																																																																																				1
AGATCC/ATCTGG	1																																																																																																																																																				1
AGATCG/ATCTCG	19		5																																																																																																																																																		24
AGATCT/AGATCT	1																																																																																																																																																				1
AGATGC/ATCTGC	2																																																																																																																																																				2
AGCAGG/CCTGCT	8	2	2		2				1																																																																																																																																												15
AGCATC/ATGCTG	2																																																																																																																																																				2
AGCCGC/CGGCTG	1																																																																																																																																																				1
AGCCGG/CCGGCT	26	1																																																																																																																																																			27
AGCCTC/AGGCTG	5	1																																																																																																																																																			6
AGCGCG/CGCGCT	31	1																																																																																																																																																			32
AGCGCT/AGCGCT	1																																																																																																																																																				1
AGCTAT/AGCTAT	1																																																																																																																																																				1
AGCTCC/AGCTGG	10																																																																																																																																																				10
AGCTCG/AGCTCG	1																																																																																																																																																				1
AGCTGC/AGCTGC	2																																																																																																																																																				2
AGGATG/ATCCTC	1																																																																																																																																																				1
AGGGGC/CCCCTG	1																																																																																																																																																				1
ATCCCG/ATCGGG		1																																																																																																																																																			1
ATCCGG/ATCCGG	1																																																																																																																																																				1
ATCGCC/ATGGCG	4																																																																																																																																																				4
ATCGCG/ATCGCG	1																																																																																																																																																				1
ATCGGC/ATGCCG	2																																																																																																																																																				2
