Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_022817605.1/fasta/hub_GCA_022817605.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              113933
Total size of examined sequences (bp):           77498572
Total number of identified SSRs:                 12394
Number of SSR containing sequences:              8954
Number of sequences containing more than 1 SSR:  1273
Number of SSRs present in compound formation:    2831


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	2170
2	1460
3	1596
4	1950
5	4135
6	1083

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	186	147	92	85	51	66	36	26	17	22	15	18	8	14	11	7	7	4	8	5	6	4	1	1		2	3		2		1	1			1		2			3		1	1	1														1						1					1																																																																																																																																													858
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	15	8	7	5	4	4	3	5	5	1	3		1			2		3	1		1	2	1		2	2	1	1		1	1				1										2				1	1			1	1		1		1								1						1																																		1																																																																																																							101
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	15	10	13	10	6	9	7	6	7	2	2	6	2	3	3	2		1	3	3	1	1		1		2	1	1	1	1		1	1	1																2	2	1		1							1	1					1		1																																					1	1																																																																																																					1	156
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	206	172	108	85	85	65	48	36	41	30	21	20	15	21	15	9	9	3	8	5	3	2	7	3	3	3	5	3	2	1	3		1	3		1		1		1		1			1	1	2	2						1			1				1																																										1																																																																																																											1055
AC	-	-	-	35	8	9	7	5		1	2	2					1				1																																																																																																																																																																																																														71
AG	-	-	-	53	29	19	14	5	6	3	2	2	1	1		1			1	1										1					1	1																																																																																																																																																																																															141
AT	-	-	-	203	81	22	11	13	4	4	3	5	3		2	1		1			1																																																																																																																																																																																																														354
CA	-	-	-	15	10	6	5				2					1																																																																																																																																																																																																																			39
CG	-	-	-	32	15	7	3		1																																																																																																																																																																																																																										58
CT	-	-	-	47	16	9	7	6	7	3		2	2		2			1		1					1			2																1						1																																																																																																																																																																																	108
GA	-	-	-	40	16	11	7	6	4								2	1	1	2		2			1					1					1				1		1																																																																																																																																																																																										97
GC	-	-	-	26	9	5	1			1																																																																																																																																																																																																																									42
GT	-	-	-	25	8	7	2		1	1	2	1																																																																																																																																																																																																																							47
TA	-	-	-	157	58	22	11	6	8	3		4	2		2		1																																																																																																																																																																																																																		274
TC	-	-	-	63	34	16	19	6	1	4	2	2		1			1		1		1		1	1		1			1		1																																																																																																																																																																																																				156
TG	-	-	-	28	14	13	5	7	1	1	1		1			1														1																																																																																																																																																																																																					73
AAC	-	-	16	3	2	1	1		1																																																																																																																																																																																																																										24
AAG	-	-	18	6	1	2	1	2					1																																																																																																																																																																																																																						31
AAT	-	-	102	44	12	11	6	3	6	4	3	3	2	1	1	2		1					1	1					1											1																																																																																																																																																																																											205
ACA	-	-	7	3	2	2																																																																																																																																																																																																																													14
ACC	-	-	1	1																																																																																																																																																																																																																															2
ACG	-	-	2	1																																																																																																																																																																																																																															3
ACT	-	-	4	3																																																																																																																																																																																																																															7
AGA	-	-	12	2																																																																																																																																																																																																																															14
AGC	-	-	5	1									1																																																																																																																																																																																																																						7
AGG	-	-	1	1	1																																																																																																																																																																																																																														3
AGT	-	-	1	1					2																																																																																																																																																																																																																										4
ATA	-	-	46	36	17	6	4	4	3	1	2		3	2		1		1																																																																																																																																																																																																																	126
ATC	-	-	11	8	3	2		1							1		1																																																																																																																																																																																																																		27
ATG	-	-	21	6	5	1	1	1																																																																																																																																																																																																																											35
ATT	-	-	108	33	16	9	6	6	5	3	3	3	1	1		1	4	1	1								1																																																																																																																																																																																																								202
CAA	-	-	8	3	3	2	1																																																																																																																																																																																																																												17
CAC	-	-	1			1																																																																																																																																																																																																																													2
CAG	-	-	1	1			1			1																																																																																																																																																																																																																									4
CAT	-	-	5	4	1			1																																																																																																																																																																																																																											11
CCA	-	-	3																																																																																																																																																																																																																																3
CCG	-	-	1																																																																																																																																																																																																																																1
CCT	-	-	1		1																																																																																																																																																																																																																														2
CGA	-	-	3	3		1																																																																																																																																																																																																																													7
CGC	-	-	2	2		1	2		1																																																																																																																																																																																																																										8
CGG	-	-						1																																																																																																																																																																																																																											1
CGT	-	-	1					1																																																																																																																																																																																																																											2
CTA	-	-	1	2	2	1																																																																																																																																																																																																																													6
CTC	-	-	2		2						1																																																																																																																																																																																																																								5
CTG	-	-	5					1																																																																																																																																																																																																																											6
CTT	-	-	16	4	5	1	1	2			1			1														1																																																																																																																																																																																																							32
GAA	-	-	20	8	2		1									1			1																																																																																																																																																																																																																33
GAC	-	-	5	1		1			1																																																																																																																																																																																																																										8
GAG	-	-	3																																																																																																																																																																																																																																3
GAT	-	-	8	1	2	2					1																																																																																																																																																																																																																								14
GCA	-	-	2		1		1	1																																																																																																																																																																																																																											5
GCC	-	-	1	2		1																																																																																																																																																																																																																													4
GCG	-	-						1																																																																																																																																																																																																																											1
GCT	-	-	2	1																																																																																																																																																																																																																															3
GGC	-	-	3																																																																																																																																																																																																																																3
GGT	-	-	2	2																																																																																																																																																																																																																															4
GTA	-	-	1	2	1	1	1																																																																																																																																																																																																																												6
GTC	-	-	5	1	1	2																																																																																																																																																																																																																													9
GTG	-	-	1																																																																																																																																																																																																																																1
GTT	-	-	5	4	4																																																																																																																																																																																																																														13
TAA	-	-	75	22	17	7		1	1		3	2	2	2				1		1																																																																																																																																																																																																															134
TAC	-	-	3	1	1	1																																																																																																																																																																																																																													6
TAG	-	-	3	1					1																																																																																																																																																																																																																										5
TAT	-	-	57	24	12	8	9	7		1		1	1		1			1	1																																																																																																																																																																																																																123
TCA	-	-	15		2		1				1																																																																																																																																																																																																																								19
TCC	-	-	6			1																																																																																																																																																																																																																													7
TCG	-	-	4	2	2		1																																																																																																																																																																																																																												9
TCT	-	-	14	6	3	1				1					1																																																																																																																																																																																																																				26
TGA	-	-	16	6	4	5	1		1										1																																																																																																																																																																																																																34
TGC	-	-	2	3																																																																																																																																																																																																																															5
TGG	-	-	1	2	1																																																																																																																																																																																																																														4
TGT	-	-	14	6	3	3	2	1			1	2					1																																																																																																																																																																																																																		33
TTA	-	-	79	34	18	9	8	6	3	4	1	2	4	2	3		2	1																																																																																																																																																																																																																	176
TTC	-	-	20	16	4	2				1			1																																																																																																																																																																																																																						44
TTG	-	-	29	9	7			2	1	1	1			1				1			1																																																																																																																																																																																																														53
AAAC	-	33	15	3	4																																																																																																																																																																																																																														55
AAAG	-	6	4	1																																																																																																																																																																																																																															11
AAAT	-	86	37	6	3																																																																																																																																																																																																																														132
AACA	-	25	20	4	2				1	1																																																																																																																																																																																																																									53
AACC	-	1																																																																																																																																																																																																																																	1
AACT	-	4	5	3	1			1																																																																																																																																																																																																																											14
AAGA	-	2	1	1																																																																																																																																																																																																																															4
AAGG	-	1																																																																																																																																																																																																																																	1
AATA	-	50	24	5	4	1		1		1									1																																																																																																																																																																																																																87
AATC	-	4																																																																																																																																																																																																																																	4
AATG	-	4	1																																																																																																																																																																																																																																5
AATT	-	106	24	11	1	1																																																																																																																																																																																																																													143
ACAA	-	48	33	12	7	9	8	3	3	1	1	1	1																																																																																																																																																																																																																						127
ACAG	-	1																																																																																																																																																																																																																																	1
ACAT	-	1																																																																																																																																																																																																																																	1
ACCA	-	1																																																																																																																																																																																																																																	1
ACCG	-	1		1																																																																																																																																																																																																																															2
ACGT	-	2																																																																																																																																																																																																																																	2
ACTA	-	5	3	3						1																																																																																																																																																																																																																									12
AGAA	-	3																																																																																																																																																																																																																																	3
AGAT	-				1																																																																																																																																																																																																																														1
AGGA	-						1																																																																																																																																																																																																																												1
AGTC	-	1																																																																																																																																																																																																																																	1
AGTT	-	5	4	1	2	1				2				1					1																																																																																																																																																																																																																17
ATAA	-	37	14	5	1	2			1	1																																																																																																																																																																																																																									61
ATAC	-	4																																																																																																																																																																																																																																	4
ATAG	-	1																																																																																																																																																																																																																																	1
ATCT	-	2																																																																																																																																																																																																																																	2
ATGA	-	3																																																																																																																																																																																																																																	3
ATGT	-	1																																																																																																																																																																																																																																	1
ATTA	-	53	10	1	2																																																																																																																																																																																																																														66
ATTC	-	3	2	1																																																																																																																																																																																																																															6
ATTG	-	6																																																																																																																																																																																																																																	6
ATTT	-	70	20	6	1	1		1		1																																																																																																																																																																																																																									100
CAAA	-	12	1	1			1	1																																																																																																																																																																																																																											16
CAAC	-	1																																																																																																																																																																																																																																	1
CAAT	-	2																																																																																																																																																																																																																																	2
CACT	-	1																																																																																																																																																																																																																																	1
CATA	-				1																																																																																																																																																																																																																														1
CATT	-	2	1																																																																																																																																																																																																																																3
CCAT	-	1																																																																																																																																																																																																																																	1
CCGT	-	1																																																																																																																																																																																																																																	1
CCTA	-	1																																																																																																																																																																																																																																	1
CCTT	-	3																																																																																																																																																																																																																																	3
CGAA	-	1																																																																																																																																																																																																																																	1
CGAC	-	1																																																																																																																																																																																																																																	1
CGAG	-	1																																																																																																																																																																																																																																	1
CGCT	-	2	1																																																																																																																																																																																																																																3
CTAA	-	20	2	2	2	1																																																																																																																																																																																																																													27
CTAT	-	2																																																																																																																																																																																																																																	2
CTCG	-	1																																																																																																																																																																																																																																	1
CTGA	-	1				1																																																																																																																																																																																																																													2
CTGT	-	1																																																																																																																																																																																																																																	1
CTTC	-	3	1	1																																																																																																																																																																																																																															5
CTTT	-	1		1																																																																																																																																																																																																																															2
GAAA	-	1																																																																																																																																																																																																																																	1
GAAC	-		1																																																																																																																																																																																																																																1
GAAG	-	1																																																																																																																																																																																																																																	1
GAAT	-	1																																																																																																																																																																																																																																	1
GACA	-	1																																																																																																																																																																																																																																	1
GAGG	-		1																																																																																																																																																																																																																																1
GATA	-	1																																																																																																																																																																																																																																	1
GATC	-	2																																																																																																																																																																																																																																	2
GATT	-	3																																																																																																																																																																																																																																	3
GCAC	-				1																																																																																																																																																																																																																														1
GCGA	-	1																																																																																																																																																																																																																																	1
GCTC	-	1																																																																																																																																																																																																																																	1
GTAT	-	2																																																																																																																																																																																																																																	2
GTCA	-	1																																																																																																																																																																																																																																	1
GTCT	-	1																																																																																																																																																																																																																																	1
GTGC	-	1		1		1																																																																																																																																																																																																																													3
GTTA	-	18	3	1	1	1																																																																																																																																																																																																																													24
GTTG	-	1																																																																																																																																																																																																																																	1
GTTT	-	20	4	2	2		2																																																																																																																																																																																																																												30
TAAA	-	39	11	11	2																																																																																																																																																																																																																														63
TAAC	-	12	5	2	1		1																																																																																																																																																																																																																												21
TAAG	-	1																																																																																																																																																																																																																																	1
TAAT	-	57	12	3	1																																																																																																																																																																																																																														73
TACC	-					1																																																																																																																																																																																																																													1
TACG	-	1																																																																																																																																																																																																																																	1
TAGC	-	1																																																																																																																																																																																																																																	1
TAGT	-	9	7	3	1						1																																																																																																																																																																																																																								21
TATC	-		1	1																																																																																																																																																																																																																															2
TATG	-	1																																																																																																																																																																																																																																	1
TATT	-	42	13	6	3	1	2																																																																																																																																																																																																																												67
TCAA	-	3																																																																																																																																																																																																																																	3
TCAT	-	2		2																																																																																																																																																																																																																															4
TCCC	-	1																																																																																																																																																																																																																																	1
TCCG	-	1																																																																																																																																																																																																																																	1
TCCT	-	1																																																																																																																																																																																																																																	1
TCGC	-	1																																																																																																																																																																																																																																	1
TCGT	-	3																																																																																																																																																																																																																																	3
TCTA	-	1																																																																																																																																																																																																																																	1
TGAA	-	1																																																																																																																																																																																																																																	1
TGAC	-			1																																																																																																																																																																																																																															1
TGAT	-	2																																																																																																																																																																																																																																	2
TGCA	-		1	1																																																																																																																																																																																																																															2
TGCG	-		1																																																																																																																																																																																																																																1
TGGC	-		1																																																																																																																																																																																																																																1
TGGT	-		1																																																																																																																																																																																																																																1
TGTA	-		1																																																																																																																																																																																																																																1
TGTT	-	47	34	12	9	4	6	2	2	1	1	1		1																																																																																																																																																																																																																					120
TTAA	-	58	17	3	1																																																																																																																																																																																																																														79
TTAC	-	1																																																																																																																																																																																																																																	1
TTAG	-	35	6	4	2				1		1	1																																																																																																																																																																																																																							50
TTAT	-	58	15	10	2	2			2																																																																																																																																																																																																																										89
TTCA	-	3																																																																																																																																																																																																																																	3
TTCC	-	1																																																																																																																																																																																																																																	1
TTCG	-	3																																																																																																																																																																																																																																	3
TTCT	-	2	1									1																																																																																																																																																																																																																							4
TTGA	-	2	1																																																																																																																																																																																																																																3
TTGT	-	14	6		1	1																																																																																																																																																																																																																													22
TTTA	-	99	29	8	5		1	1																																																																																																																																																																																																																											143
TTTC	-	11																																																																																																																																																																																																																																	11
TTTG	-	38	11	7	1	3		1		1																																																																																																																																																																																																																									62
AAAAC	23	1																																																																																																																																																																																																																																	24
AAAAG	22																																																																																																																																																																																																																																		22
AAAAT	115	10	2	1	1																																																																																																																																																																																																																														129
AAACA	9	1																																																																																																																																																																																																																																	10
AAACC	2	1																																																																																																																																																																																																																																	3
AAACG	2																																																																																																																																																																																																																																		2
AAACT	6	1																																																																																																																																																																																																																																	7
AAAGA	7																																																																																																																																																																																																																																		7
AAAGG	1																																																																																																																																																																																																																																		1
AAAGT	3																																																																																																																																																																																																																																		3
AAATA	54	4	2																																																																																																																																																																																																																																60
AAATC	8																																																																																																																																																																																																																																		8
AAATG	10		1	1																																																																																																																																																																																																																															12
AAATT	50	5																																																																																																																																																																																																																																	55
AACAA	11																																																																																																																																																																																																																																		11
AACAT	7																																																																																																																																																																																																																																		7
AACCG	1																																																																																																																																																																																																																																		1
AACCT	3																																																																																																																																																																																																																																		3
AACGA		1																																																																																																																																																																																																																																	1
AACGT	1																																																																																																																																																																																																																																		1
AACTA	17	7	1		1																																																																																																																																																																																																																														26
AACTT	2	1																																																																																																																																																																																																																																	3
AAGAA	1																																																																																																																																																																																																																																		1
AAGAG	1																																																																																																																																																																																																																																		1
AAGAT	2																																																																																																																																																																																																																																		2
AAGCG	1																																																																																																																																																																																																																																		1
AAGCT	4	2	4	2	2	1																																																																																																																																																																																																																													15
AAGGA	1																																																																																																																																																																																																																																		1
AAGGT	1																																																																																																																																																																																																																																		1
AAGTA	2																																																																																																																																																																																																																																		2
AAGTG	1																																																																																																																																																																																																																																		1
AAGTT	7	1																																																																																																																																																																																																																																	8
AATAA	42	2	3																																																																																																																																																																																																																																47
AATAC	2		1																																																																																																																																																																																																																																3
AATAG		2																																																																																																																																																																																																																																	2
AATAT	12	1	1																																																																																																																																																																																																																																14
AATCA	2																																																																																																																																																																																																																																		2
AATGA	3																																																																																																																																																																																																																																		3
AATGG	1																																																																																																																																																																																																																																		1
AATGT	1																																																																																																																																																																																																																																		1
AATTA	36		1																																																																																																																																																																																																																																37
AATTC	5	2																																																																																																																																																																																																																																	7
AATTG	4																																																																																																																																																																																																																																		4
AATTT	43	7	2																																																																																																																																																																																																																																52
ACAAA	10																																																																																																																																																																																																																																		10
ACAAT	3																																																																																																																																																																																																																																		3
ACATA	1																																																																																																																																																																																																																																		1
ACATC	1																																																																																																																																																																																																																																		1
ACATT	1																																																																																																																																																																																																																																		1
ACCCC	1																																																																																																																																																																																																																																		1
ACCGC	1																																																																																																																																																																																																																																		1
ACCTA	1			1																																																																																																																																																																																																																															2
ACGAA	2																																																																																																																																																																																																																																		2
ACGCG	1																																																																																																																																																																																																																																		1
ACGGC	1																																																																																																																																																																																																																																		1
ACGTT	1																																																																																																																																																																																																																																		1
ACTAA	14	3	1	1																																																																																																																																																																																																																															19
ACTAG	1																																																																																																																																																																																																																																		1
ACTCA	1	3	1																																																																																																																																																																																																																																5
ACTTA	10																																																																																																																																																																																																																																		10
ACTTC	5																																																																																																																																																																																																																																		5
ACTTT	2																																																																																																																																																																																																																																		2
AGAAA	6		1																																																																																																																																																																																																																																7
AGAAC	1																																																																																																																																																																																																																																		1
AGAAG	2																																																																																																																																																																																																																																		2
AGAAT	2	1																																																																																																																																																																																																																																	3
AGACA			1																																																																																																																																																																																																																																1
AGAGA	1																																																																																																																																																																																																																																		1
AGATA	2																																																																																																																																																																																																																																		2
AGATT	1																																																																																																																																																																																																																																		1
AGCTA	112	105	48	34	18	17	5	5	4	3	2	1	1	1																																																																																																																																																																																																																					356
AGCTT	86	47	24	14	9	2	1																																																																																																																																																																																																																												183
AGGAA	1																																																																																																																																																																																																																																		1
AGGCA		1																																																																																																																																																																																																																																	1
AGGGG	1																																																																																																																																																																																																																																		1
AGGTT	8																																																																																																																																																																																																																																		8
AGTAA	2																																																																																																																																																																																																																																		2
AGTAT	2																																																																																																																																																																																																																																		2
AGTCG	1																																																																																																																																																																																																																																		1
AGTGG	1																																																																																																																																																																																																																																		1
AGTTA	5																																																																																																																																																																																																																																		5
AGTTC			1																																																																																																																																																																																																																																1
AGTTT	1																																																																																																																																																																																																																																		1
ATAAA	40	2		1																																																																																																																																																																																																																															43
ATAAC	3																																																																																																																																																																																																																																		3
ATAAG	2																																																																																																																																																																																																																																		2
ATAAT	14																																																																																																																																																																																																																																		14
ATACA	3																																																																																																																																																																																																																																		3
ATACG	1																																																																																																																																																																																																																																		1
ATAGA	1		1																																																																																																																																																																																																																																2
ATAGC	1																																																																																																																																																																																																																																		1
ATATA	15	2																																																																																																																																																																																																																																	17
ATATG			1																																																																																																																																																																																																																																1
ATATT	12	1																																																																																																																																																																																																																																	13
ATCAA	1																																																																																																																																																																																																																																		1
ATCAG	1																																																																																																																																																																																																																																		1
ATCAT		1																																																																																																																																																																																																																																	1
ATCCA	1																																																																																																																																																																																																																																		1
ATCCG	1																																																																																																																																																																																																																																		1
ATCCT	2																																																																																																																																																																																																																																		2
ATCGA	4	1																																																																																																																																																																																																																																	5
ATCGG	2																																																																																																																																																																																																																																		2
ATCTA	1																																																																																																																																																																																																																																		1
ATCTT	1																																																																																																																																																																																																																																		1
ATGAA	3		1																																																																																																																																																																																																																																4
ATGGA	1																																																																																																																																																																																																																																		1
ATGTA	2																																																																																																																																																																																																																																		2
ATGTT	7																																																																																																																																																																																																																																		7
ATTAA	16	5		2																																																																																																																																																																																																																															23
ATTAC	4																																																																																																																																																																																																																																		4
ATTAT	16	3																																																																																																																																																																																																																																	19
ATTCA	3																																																																																																																																																																																																																																		3
ATTCC	9	3	1		2	2	1	1	1																																																																																																																																																																																																																										20
ATTCG	1																																																																																																																																																																																																																																		1
ATTCT	2																																																																																																																																																																																																																																		2
ATTGA	3																																																																																																																																																																																																																																		3
ATTGC	1																																																																																																																																																																																																																																		1
ATTGG	1																																																																																																																																																																																																																																		1
ATTGT	4																																																																																																																																																																																																																																		4
ATTTA	19	2	4																																																																																																																																																																																																																																25
ATTTC	12																																																																																																																																																																																																																																		12
ATTTG	10	1																																																																																																																																																																																																																																	11
ATTTT	82	7		1																																																																																																																																																																																																																															90
CAAAA	9	1																																																																																																																																																																																																																																	10
CAAAT	1																																																																																																																																																																																																																																		1
CAACA	1																																																																																																																																																																																																																																		1
CAACT	2		1																																																																																																																																																																																																																																3
CAATT	7																																																																																																																																																																																																																																		7
CACAA	1																																																																																																																																																																																																																																		1
CACAC	2																																																																																																																																																																																																																																		2
CACTT	1																																																																																																																																																																																																																																		1
CAGAA	1																																																																																																																																																																																																																																		1
CAGGA	1																																																																																																																																																																																																																																		1
CAGTA	1																																																																																																																																																																																																																																		1
CATAA	10	1																																																																																																																																																																																																																																	11
CATGT	1																																																																																																																																																																																																																																		1
CATTA	4																																																																																																																																																																																																																																		4
CATTC	4	5	5						1																																																																																																																																																																																																																										15
CATTT	4																																																																																																																																																																																																																																		4
CCAAA	1																																																																																																																																																																																																																																		1
CCAAC	1																																																																																																																																																																																																																																		1
CCAAT	1																																																																																																																																																																																																																																		1
CCATT	1	2				1																																																																																																																																																																																																																													4
CCCCT	4	1																																																																																																																																																																																																																																	5
CCCGA	1																																																																																																																																																																																																																																		1
CCGCC	1																																																																																																																																																																																																																																		1
CCGGC	1																																																																																																																																																																																																																																		1
CCTAA	3																																																																																																																																																																																																																																		3
CCTAT	1																																																																																																																																																																																																																																		1
CCTCC	1																																																																																																																																																																																																																																		1
CGAAA	8	2																																																																																																																																																																																																																																	10
CGAAT	1																																																																																																																																																																																																																																		1
CGACG	1																																																																																																																																																																																																																																		1
CGAGC		1																																																																																																																																																																																																																																	1
CGCCT	1																																																																																																																																																																																																																																		1
CGCGC	1																																																																																																																																																																																																																																		1
CGCGG	1																																																																																																																																																																																																																																		1
CGCGT	1																																																																																																																																																																																																																																		1
CGGCG	1																																																																																																																																																																																																																																		1
CGGTA	3																																																																																																																																																																																																																																		3
CGTGT	1																																																																																																																																																																																																																																		1
CGTTA	1																																																																																																																																																																																																																																		1
CTAAA	5										1																																																																																																																																																																																																																								6
CTAAC	2																																																																																																																																																																																																																																		2
CTAAG	46	50	21	19	4	4	2	1																																																																																																																																																																																																																											147
CTAAT	1																																																																																																																																																																																																																																		1
CTATA	1																																																																																																																																																																																																																																		1
CTCAG	4																																																																																																																																																																																																																																		4
CTCCC	1																																																																																																																																																																																																																																		1
CTCGA	1																																																																																																																																																																																																																																		1
CTGAG	1																																																																																																																																																																																																																																		1
CTGAT	2																																																																																																																																																																																																																																		2
CTTAA	2											1																																																																																																																																																																																																																							3
CTTAG	60	51	16	17	8		2	2		1	1												1																																																																																																																																																																																																												159
CTTAT	2																																																																																																																																																																																																																																		2
CTTCC		1																																																																																																																																																																																																																																	1
CTTTA	1	1																																																																																																																																																																																																																																	2
CTTTC	1																																																																																																																																																																																																																																		1
CTTTT	11		2																																																																																																																																																																																																																																13
GAAAA	9																																																																																																																																																																																																																																		9
GAAAG	1																																																																																																																																																																																																																																		1
GAAAT	4																																																																																																																																																																																																																																		4
GAACT	1																																																																																																																																																																																																																																		1
GAAGA	1	1																																																																																																																																																																																																																																	2
GAATA	1																																																																																																																																																																																																																																		1
GAATG	1	1	1																																																																																																																																																																																																																																3
GAATT	3	1																																																																																																																																																																																																																																	4
GACGT	1																																																																																																																																																																																																																																		1
GACTA	1																																																																																																																																																																																																																																		1
GACTC	1																																																																																																																																																																																																																																		1
GAGAG	1																																																																																																																																																																																																																																		1
GATTA	1																																																																																																																																																																																																																																		1
GATTC	1																																																																																																																																																																																																																																		1
GATTT	4																																																																																																																																																																																																																																		4
GCATT	2																																																																																																																																																																																																																																		2
GCCCG	1																																																																																																																																																																																																																																		1
GCCTT	1																																																																																																																																																																																																																																		1
GCGCG	3																																																																																																																																																																																																																																		3
GCGGC	1																																																																																																																																																																																																																																		1
GCTAA	64	25	23	19	9	3	1		1	1	1																																																																																																																																																																																																																								147
GCTTA	34	11	6	5	5	1		1																																																																																																																																																																																																																											63
GGAAC	1																																																																																																																																																																																																																																		1
GGAAT	1					1																																																																																																																																																																																																																													2
GGAGG	1																																																																																																																																																																																																																																		1
GGCGC	2																																																																																																																																																																																																																																		2
GGGAG	2																																																																																																																																																																																																																																		2
GGGGA	1																																																																																																																																																																																																																																		1
GGGGT	1																																																																																																																																																																																																																																		1
GGGTC	1																																																																																																																																																																																																																																		1
GGTGG	1																																																																																																																																																																																																																																		1
GGTTA	2																																																																																																																																																																																																																																		2
GGTTT	1																																																																																																																																																																																																																																		1
GTAAA	2																																																																																																																																																																																																																																		2
GTAAC	2																																																																																																																																																																																																																																		2
GTAAT	3	1																																																																																																																																																																																																																																	4
GTATA	1																																																																																																																																																																																																																																		1
GTATC	1																																																																																																																																																																																																																																		1
GTATT	2																																																																																																																																																																																																																																		2
GTCCC	1																																																																																																																																																																																																																																		1
GTCGA	3																																																																																																																																																																																																																																		3
GTCGT	1																																																																																																																																																																																																																																		1
GTTAA	3																																																																																																																																																																																																																																		3
GTTAG	5																																																																																																																																																																																																																																		5
GTTAT	1							1																																																																																																																																																																																																																											2
GTTTT	9	2																																																																																																																																																																																																																																	11
TAAAA	45	4	2	1																																																																																																																																																																																																																															52
TAAAC	9	2	1	1																																																																																																																																																																																																																															13
TAAAG		1																																																																																																																																																																																																																																	1
TAAAT	17	2																																																																																																																																																																																																																																	19
TAACA	3																																																																																																																																																																																																																																		3
TAACC	5																																																																																																																																																																																																																																		5
TAACT	3																																																																																																																																																																																																																																		3
TAAGC	24	19	8	14	5	3		1			1					1																																																																																																																																																																																																																			76
TAAGT	2																																																																																																																																																																																																																																		2
TAATA	11																																																																																																																																																																																																																																		11
TAATC	1	3																																																																																																																																																																																																																																	4
TAATG	2																																																																																																																																																																																																																																		2
TAATT	19	4																																																																																																																																																																																																																																	23
TACAA	2																																																																																																																																																																																																																																		2
TACAC	1	1																																																																																																																																																																																																																																	2
TACAT	1																																																																																																																																																																																																																																		1
TACTT	2																																																																																																																																																																																																																																		2
TAGAA	1																																																																																																																																																																																																																																		1
TAGAT	1																																																																																																																																																																																																																																		1
TAGCT	164	186	74	38	14	9	11	3	3	2	2	3	1																																																																																																																																																																																																																						510
TAGGA				1																																																																																																																																																																																																																															1
TAGGT	5	3																																																																																																																																																																																																																																	8
TAGTA	1																																																																																																																																																																																																																																		1
TAGTC	2			1																																																																																																																																																																																																																															3
TAGTT	5																																																																																																																																																																																																																																		5
TATAA	3																																																																																																																																																																																																																																		3
TATAC	1																																																																																																																																																																																																																																		1
TATAT	9	2	1																																																																																																																																																																																																																																12
TATCA	1																																																																																																																																																																																																																																		1
TATCC	3			1																																																																																																																																																																																																																															4
TATCT	1																																																																																																																																																																																																																																		1
TATGT	3																																																																																																																																																																																																																																		3
TATTA	16																																																																																																																																																																																																																																		16
TATTC	1	1																																																																																																																																																																																																																																	2
TATTG	3	1																																																																																																																																																																																																																																	4
TATTT	50	6	1					1																																																																																																																																																																																																																											58
TCAAA	3	1																																																																																																																																																																																																																																	4
TCAAT	1																																																																																																																																																																																																																																		1
TCACT		1																																																																																																																																																																																																																																	1
TCATC	1																																																																																																																																																																																																																																		1
TCATG	1																																																																																																																																																																																																																																		1
TCATT	3																																																																																																																																																																																																																																		3
TCCAT	4		3			1																																																																																																																																																																																																																													8
TCCCC	2																																																																																																																																																																																																																																		2
TCCCT	1																																																																																																																																																																																																																																		1
TCGAG	1																																																																																																																																																																																																																																		1
TCGAT	3																																																																																																																																																																																																																																		3
TCGGG	1																																																																																																																																																																																																																																		1
TCGTG		1																																																																																																																																																																																																																																	1
TCGTT	1																																																																																																																																																																																																																																		1
TCTAA	7																																																																																																																																																																																																																																		7
TCTCT	2																																																																																																																																																																																																																																		2
TCTTA	2																																																																																																																																																																																																																																		2
TCTTC	2																																																																																																																																																																																																																																		2
TCTTG		1																																																																																																																																																																																																																																	1
TCTTT	11																																																																																																																																																																																																																																		11
TGAAA	11																																																																																																																																																																																																																																		11
TGAAT	1		1																																																																																																																																																																																																																																2
TGACA	1																																																																																																																																																																																																																																		1
TGACC	1																																																																																																																																																																																																																																		1
TGAGC	3	1																																																																																																																																																																																																																																	4
TGATT	3																																																																																																																																																																																																																																		3
TGCGA		1																																																																																																																																																																																																																																	1
TGGAA	1	1	1	2						1																																																																																																																																																																																																																									6
TGGAC	1																																																																																																																																																																																																																																		1
TGGAG	1																																																																																																																																																																																																																																		1
TGGAT	1																																																																																																																																																																																																																																		1
TGTAA	4																																																																																																																																																																																																																																		4
TGTAT	1		1																																																																																																																																																																																																																																2
TGTCA	1	2																																																																																																																																																																																																																																	3
TGTGG	1																																																																																																																																																																																																																																		1
TGTGT				1																																																																																																																																																																																																																															1
TGTTA	4																																																																																																																																																																																																																																		4
TGTTG	2																																																																																																																																																																																																																																		2
TGTTT	9	3																																																																																																																																																																																																																																	12
TTAAA	23	3	2																																																																																																																																																																																																																																28
TTAAC	1																																																																																																																																																																																																																																		1
TTAAG	2	4																																																																																																																																																																																																																																	6
TTAAT	22	4																																																																																																																																																																																																																																	26
TTACA	5																																																																																																																																																																																																																																		5
TTACG	1																																																																																																																																																																																																																																		1
TTACT	2																																																																																																																																																																																																																																		2
TTAGA	3																																																																																																																																																																																																																																		3
TTAGC	105	51	29	15	11	7	2	4	1		1																																																																																																																																																																																																																								226
TTAGG	7	1																																																																																																																																																																																																																																	8
TTAGT	11	3						2																																																																																																																																																																																																																											16
TTATA	10	1																																																																																																																																																																																																																																	11
TTATC	2	1																																																																																																																																																																																																																																	3
TTATG	7	1																																																																																																																																																																																																																																	8
TTATT	50	4	2																																																																																																																																																																																																																																56
TTCAA	6				1																																																																																																																																																																																																																														7
TTCAC	1																																																																																																																																																																																																																																		1
TTCAG	1																																																																																																																																																																																																																																		1
TTCAT	3																																																																																																																																																																																																																																		3
TTCCA	13	4	3	1																																																																																																																																																																																																																															21
TTCCG	1																																																																																																																																																																																																																																		1
TTCGA	2	1																																																																																																																																																																																																																																	3
TTCTA	1																																																																																																																																																																																																																																		1
TTCTC	2																																																																																																																																																																																																																																		2
TTCTT	8																																																																																																																																																																																																																																		8
TTGAA	5			1																																																																																																																																																																																																																															6
TTGGA	1																																																																																																																																																																																																																																		1
TTGGC	1																																																																																																																																																																																																																																		1
TTGGT	1																																																																																																																																																																																																																																		1
TTGTA	2																																																																																																																																																																																																																																		2
TTGTG					1																																																																																																																																																																																																																														1
TTGTT	9																																																																																																																																																																																																																																		9
TTTAA	36	6	5	1																																																																																																																																																																																																																															48
TTTAC	1																																																																																																																																																																																																																																		1
TTTAG	31	9																																																																																																																																																																																																																																	40
TTTAT	46	9	2																																																																																																																																																																																																																																57
TTTCA	9																																																																																																																																																																																																																																		9
TTTCC	1																																																																																																																																																																																																																																		1
TTTCG	3																																																																																																																																																																																																																																		3
TTTCT	13	1																																																																																																																																																																																																																																	14
TTTGA	4																																																																																																																																																																																																																																		4
TTTGG	3																																																																																																																																																																																																																																		3
TTTGT	8																																																																																																																																																																																																																																		8
TTTTA	80	7	1			2																																																																																																																																																																																																																													90
TTTTC	17	1																																																																																																																																																																																																																																	18
TTTTG	35	3	2																																																																																																																																																																																																																																40
AAAAAC	5	3																																																																																																																																																																																																																																	8
AAAAAG	4																																																																																																																																																																																																																																		4
AAAAAT	26	4		1																																																																																																																																																																																																																															31
AAAACA	3																																																																																																																																																																																																																																		3
AAAACC	1																																																																																																																																																																																																																																		1
AAAACG	1																																																																																																																																																																																																																																		1
AAAACT	1																																																																																																																																																																																																																																		1
AAAAGA	2																																																																																																																																																																																																																																		2
AAAAGG	1																																																																																																																																																																																																																																		1
AAAATA	25		1																																																																																																																																																																																																																																26
AAAATC	30	1																																																																																																																																																																																																																																	31
AAAATG	2																																																																																																																																																																																																																																		2
AAAATT	7																																																																																																																																																																																																																																		7
AAACAA	1																																																																																																																																																																																																																																		1
AAACTT	2																																																																																																																																																																																																																																		2
AAAGAA	4																																																																																																																																																																																																																																		4
AAAGTT		1																																																																																																																																																																																																																																	1
AAATAA	6																																																																																																																																																																																																																																		6
AAATAC	1																																																																																																																																																																																																																																		1
AAATAT	2																																																																																																																																																																																																																																		2
AAATCG	5					1																																																																																																																																																																																																																													6
AAATCT	1																																																																																																																																																																																																																																		1
AAATGA	2																																																																																																																																																																																																																																		2
AAATGT	1																																																																																																																																																																																																																																		1
AAATTA	7																																																																																																																																																																																																																																		7
AAATTC	4	1																																																																																																																																																																																																																																	5
AAATTG	10																																																																																																																																																																																																																																		10
AAATTT	4																																																																																																																																																																																																																																		4
AACAAA	6	1																																																																																																																																																																																																																																	7
AACAAT	3																																																																																																																																																																																																																																		3
AACACA	1																																																																																																																																																																																																																																		1
AACAGT		1																																																																																																																																																																																																																																	1
AACATA	2	1																																																																																																																																																																																																																																	3
AACGCA	2																																																																																																																																																																																																																																		2
AACGCG	2		1																																																																																																																																																																																																																																3
AACTGT	1																																																																																																																																																																																																																																		1
AACTTT	1																																																																																																																																																																																																																																		1
AAGAAA	3	1																																																																																																																																																																																																																																	4
AAGAAC	1																																																																																																																																																																																																																																		1
AAGAAT	1																																																																																																																																																																																																																																		1
AAGCAG	1																																																																																																																																																																																																																																		1
AAGGAG							1																																																																																																																																																																																																																												1
AAGGAT	1																																																																																																																																																																																																																																		1
AAGGGG	1																																																																																																																																																																																																																																		1
AAGTCA	1																																																																																																																																																																																																																																		1
AAGTCG	2																																																																																																																																																																																																																																		2
AATAAA	3	1																																																																																																																																																																																																																																	4
AATAAC	3																																																																																																																																																																																																																																		3
AATATA	2																																																																																																																																																																																																																																		2
AATATG		1																																																																																																																																																																																																																																	1
AATCAA	2	1																																																																																																																																																																																																																																	3
AATCAG	1																																																																																																																																																																																																																																		1
AATCCA	1		1																																																																																																																																																																																																																																2
AATCGA	1	1																																																																																																																																																																																																																																	2
AATCTC	1																																																																																																																																																																																																																																		1
AATGAA	1																																																																																																																																																																																																																																		1
AATGTA						1																																																																																																																																																																																																																													1
AATGTT	1																																																																																																																																																																																																																																		1
AATTAA	2	1																																																																																																																																																																																																																																	3
AATTAT	4																																																																																																																																																																																																																																		4
AATTCT	1																																																																																																																																																																																																																																		1
AATTGT	2																																																																																																																																																																																																																																		2
AATTTA	5																																																																																																																																																																																																																																		5
AATTTC	5																																																																																																																																																																																																																																		5
AATTTG	7	1																																																																																																																																																																																																																																	8
AATTTT	8	1																																																																																																																																																																																																																																	9
ACAAAA	2																																																																																																																																																																																																																																		2
ACAATC	1																																																																																																																																																																																																																																		1
ACACGG	1	1																																																																																																																																																																																																																																	2
ACATAA	2																																																																																																																																																																																																																																		2
ACCCGA	1																																																																																																																																																																																																																																		1
ACCGCA	3																																																																																																																																																																																																																																		3
ACCTCG	1																																																																																																																																																																																																																																		1
ACGCCG		1																																																																																																																																																																																																																																	1
ACTAAT		1																																																																																																																																																																																																																																	1
ACTACA	1				1																																																																																																																																																																																																																														2
ACTACC	1																																																																																																																																																																																																																																		1
ACTCTT		1																																																																																																																																																																																																																																	1
ACTGTC	1																																																																																																																																																																																																																																		1
ACTTAG	1																																																																																																																																																																																																																																		1
ACTTCG	1																																																																																																																																																																																																																																		1
AGAAAA	3																																																																																																																																																																																																																																		3
AGAACA	1																																																																																																																																																																																																																																		1
AGAATT	1																																																																																																																																																																																																																																		1
AGAGCG	2																																																																																																																																																																																																																																		2
AGAGTA	1																																																																																																																																																																																																																																		1
AGATAT	2																																																																																																																																																																																																																																		2
AGCGAG	1																																																																																																																																																																																																																																		1
AGGGAA	1																																																																																																																																																																																																																																		1
AGGTAA	1																																																																																																																																																																																																																																		1
AGGTCA	1	1																																																																																																																																																																																																																																	2
AGGTCT	1																																																																																																																																																																																																																																		1
AGGTTC		1																																																																																																																																																																																																																																	1
AGTCGA		1																																																																																																																																																																																																																																	1
AGTTAA	1				1																																																																																																																																																																																																																														2
AGTTCG		1																																																																																																																																																																																																																																	1
ATAAAA	3																																																																																																																																																																																																																																		3
ATAAAC	2																																																																																																																																																																																																																																		2
ATAAAT	3																																																																																																																																																																																																																																		3
ATAACA	1																																																																																																																																																																																																																																		1
ATAAGA	1																																																																																																																																																																																																																																		1
ATAAGG	1																																																																																																																																																																																																																																		1
ATAATG	1																																																																																																																																																																																																																																		1
ATAATT	3																																																																																																																																																																																																																																		3
ATAGAA	1																																																																																																																																																																																																																																		1
ATATAA	2	1																																																																																																																																																																																																																																	3
ATATCC	1																																																																																																																																																																																																																																		1
ATATGT	1																																																																																																																																																																																																																																		1
ATATTA	3																																																																																																																																																																																																																																		3
ATATTT	5																																																																																																																																																																																																																																		5
ATCAAA	2																																																																																																																																																																																																																																		2
ATCATA	1																																																																																																																																																																																																																																		1
ATCATG	1																																																																																																																																																																																																																																		1
ATCATT	1																																																																																																																																																																																																																																		1
ATCCAT	1																																																																																																																																																																																																																																		1
ATCCTT	3																																																																																																																																																																																																																																		3
ATCGAA	8		1																																																																																																																																																																																																																																9
ATCGAG	2																																																																																																																																																																																																																																		2
ATCGAT	2																																																																																																																																																																																																																																		2
ATCTAT	1																																																																																																																																																																																																																																		1
ATCTTA	1																																																																																																																																																																																																																																		1
ATGAAA	1																																																																																																																																																																																																																																		1
ATGAAT	1																																																																																																																																																																																																																																		1
ATGACC	1																																																																																																																																																																																																																																		1
ATGATA	1																																																																																																																																																																																																																																		1
ATGGAT	1																																																																																																																																																																																																																																		1
ATGTTT	1																																																																																																																																																																																																																																		1
ATTAAC	1																																																																																																																																																																																																																																		1
ATTAAT	3																																																																																																																																																																																																																																		3
ATTATA	1																																																																																																																																																																																																																																		1
ATTATC	1	1																																																																																																																																																																																																																																	2
ATTATG	1																																																																																																																																																																																																																																		1
ATTCAA	1																																																																																																																																																																																																																																		1
ATTCAT	2																																																																																																																																																																																																																																		2
ATTCCT	1																																																																																																																																																																																																																																		1
ATTCTA	1																																																																																																																																																																																																																																		1
ATTGAA	1																																																																																																																																																																																																																																		1
ATTGTT		1																																																																																																																																																																																																																																	1
ATTTAA	1																																																																																																																																																																																																																																		1
ATTTAC	1																																																																																																																																																																																																																																		1
ATTTAT	1																																																																																																																																																																																																																																		1
ATTTCA	2																																																																																																																																																																																																																																		2
ATTTCC	1																																																																																																																																																																																																																																		1
ATTTCG	21	3																																																																																																																																																																																																																																	24
ATTTGA	4																																																																																																																																																																																																																																		4
ATTTGG	1																																																																																																																																																																																																																																		1
ATTTGT	2																																																																																																																																																																																																																																		2
ATTTTA	4	1																																																																																																																																																																																																																																	5
ATTTTC	3																																																																																																																																																																																																																																		3
ATTTTG	11																																																																																																																																																																																																																																		11
ATTTTT	28	3	1																																																																																																																																																																																																																																32
CAAAAA	5																																																																																																																																																																																																																																		5
CAAAAT	3																																																																																																																																																																																																																																		3
CAAACT	1																																																																																																																																																																																																																																		1
CAAATC	4																																																																																																																																																																																																																																		4
CAAATG	1																																																																																																																																																																																																																																		1
CAAATT	3																																																																																																																																																																																																																																		3
CAAGGA		1																																																																																																																																																																																																																																	1
CAATAT	1																																																																																																																																																																																																																																		1
CAATTT	9	1																																																																																																																																																																																																																																	10
CACACG						1																																																																																																																																																																																																																													1
CACGGT	1																																																																																																																																																																																																																																		1
CAGCAA	1																																																																																																																																																																																																																																		1
CAGGCT	1																																																																																																																																																																																																																																		1
CATAAA	1																																																																																																																																																																																																																																		1
CATCAC		1																																																																																																																																																																																																																																	1
CCAAAA	1																																																																																																																																																																																																																																		1
CCCCCA	1																																																																																																																																																																																																																																		1
CCCCCG	1																																																																																																																																																																																																																																		1
CCCCCT	1																																																																																																																																																																																																																																		1
CCGCAT	1																																																																																																																																																																																																																																		1
CCGTGT	1	2																																																																																																																																																																																																																																	3
CCTCTT	2																																																																																																																																																																																																																																		2
CCTTCA	1																																																																																																																																																																																																																																		1
CCTTGA	1																																																																																																																																																																																																																																		1
CGAAAA	1																																																																																																																																																																																																																																		1
CGATTT				1																																																																																																																																																																																																																															1
CGCTCT	18	2																																																																																																																																																																																																																																	20
CGTCAT	1																																																																																																																																																																																																																																		1
CGTGTA	3																																																																																																																																																																																																																																		3
CGTGTC	1																																																																																																																																																																																																																																		1
CGTTTT	1																																																																																																																																																																																																																																		1
CTACAA		1																																																																																																																																																																																																																																	1
CTCACC	1																																																																																																																																																																																																																																		1
CTCTTC	1																																																																																																																																																																																																																																		1
CTGTTG	1																																																																																																																																																																																																																																		1
CTTACA	1																																																																																																																																																																																																																																		1
CTTCAA		1																																																																																																																																																																																																																																	1
CTTCGA	1	1																																																																																																																																																																																																																																	2
CTTCTC		1		1																																																																																																																																																																																																																															2
CTTGAG	1																																																																																																																																																																																																																																		1
CTTTTT	3			1																																																																																																																																																																																																																															4
GAAACT	1																																																																																																																																																																																																																																		1
GAAATC	4	2	1																																																																																																																																																																																																																																7
GAAATT	1																																																																																																																																																																																																																																		1
GAACCA		1																																																																																																																																																																																																																																	1
GAAGAT	1																																																																																																																																																																																																																																		1
GAAGGA		1																																																																																																																																																																																																																																	1
GAATCT	1																																																																																																																																																																																																																																		1
GACAAA	1																																																																																																																																																																																																																																		1
GACTTC	1																																																																																																																																																																																																																																		1
GAGAGC	37	3	1																																																																																																																																																																																																																																41
GAGGAA	1																																																																																																																																																																																																																																		1
GAGGTT	1																																																																																																																																																																																																																																		1
GATAAG			1																																																																																																																																																																																																																																1
GATAAT	1																																																																																																																																																																																																																																		1
GATGAG	1																																																																																																																																																																																																																																		1
GATGCG	1																																																																																																																																																																																																																																		1
GATTAA	1																																																																																																																																																																																																																																		1
GATTAC	1																																																																																																																																																																																																																																		1
GATTAT							1																																																																																																																																																																																																																												1
GATTTC	6	1																																																																																																																																																																																																																																	7
GATTTG	5	3	1																																																																																																																																																																																																																																9
GATTTT	33	2																																																																																																																																																																																																																																	35
GCACAC	1																																																																																																																																																																																																																																		1
GCGGTG	1																																																																																																																																																																																																																																		1
GCGTCG				1																																																																																																																																																																																																																															1
GCTGAC	1																																																																																																																																																																																																																																		1
GCTTCA	1																																																																																																																																																																																																																																		1
GGAGGT		1																																																																																																																																																																																																																																	1
GGAGTC			1																																																																																																																																																																																																																																1
GGAGTT	1																																																																																																																																																																																																																																		1
GGATAA	1																																																																																																																																																																																																																																		1
GGATTT	1																																																																																																																																																																																																																																		1
GGGGGT		1																																																																																																																																																																																																																																	1
GGTGCG	2																																																																																																																																																																																																																																		2
GTAAAT	1																																																																																																																																																																																																																																		1
GTAATT	1																																																																																																																																																																																																																																		1
GTACAC	1																																																																																																																																																																																																																																		1
GTAGTT	1																																																																																																																																																																																																																																		1
GTCGAA			1																																																																																																																																																																																																																																1
GTCGGG	1																																																																																																																																																																																																																																		1
GTGTGC	1																																																																																																																																																																																																																																		1
GTTTAA			1																																																																																																																																																																																																																																1
GTTTAT	2	1																																																																																																																																																																																																																																	3
GTTTGG	1																																																																																																																																																																																																																																		1
GTTTTT	4																																																																																																																																																																																																																																		4
TAAAAA	6																																																																																																																																																																																																																																		6
TAAAAT	3					1																																																																																																																																																																																																																													4
TAAACA	2																																																																																																																																																																																																																																		2
TAAAGA	1																																																																																																																																																																																																																																		1
TAAATT	2																																																																																																																																																																																																																																		2
TAACTT	1																																																																																																																																																																																																																																		1
TAAGGA	13	1																																																																																																																																																																																																																																	14
TAATAG		1																																																																																																																																																																																																																																	1
TAATAT		1																																																																																																																																																																																																																																	1
TAATGA	1																																																																																																																																																																																																																																		1
TAATGT	1																																																																																																																																																																																																																																		1
TAATTA	4																																																																																																																																																																																																																																		4
TAATTC	2																																																																																																																																																																																																																																		2
TAATTT	5																																																																																																																																																																																																																																		5
TACATA	1																																																																																																																																																																																																																																		1
TACCAA	1																																																																																																																																																																																																																																		1
TAGTTG	1																																																																																																																																																																																																																																		1
TATAAA	5																																																																																																																																																																																																																																		5
TATAAT	2																																																																																																																																																																																																																																		2
TATATG	1	1																																																																																																																																																																																																																																	2
TATATT	1																																																																																																																																																																																																																																		1
TATCCT	7																																																																																																																																																																																																																																		7
TATCTA	1																																																																																																																																																																																																																																		1
TATGAA		1																																																																																																																																																																																																																																	1
TATGGA	5																																																																																																																																																																																																																																		5
TATTAA	1																																																																																																																																																																																																																																		1
TATTGT		1																																																																																																																																																																																																																																	1
TATTTA	1	1																																																																																																																																																																																																																																	2
TATTTC	1																																																																																																																																																																																																																																		1
TATTTT	16																																																																																																																																																																																																																																		16
TCAAAA	2																																																																																																																																																																																																																																		2
TCAAGA	1																																																																																																																																																																																																																																		1
TCAATT	1																																																																																																																																																																																																																																		1
TCACTA	1																																																																																																																																																																																																																																		1
TCAGAT	1																																																																																																																																																																																																																																		1
TCATTA	1																																																																																																																																																																																																																																		1
TCATTT	2																																																																																																																																																																																																																																		2
TCCAAA	1																																																																																																																																																																																																																																		1
TCCAAG	1																																																																																																																																																																																																																																		1
TCCCTC		1																																																																																																																																																																																																																																	1
TCCGAT	1																																																																																																																																																																																																																																		1
TCCGCG	1																																																																																																																																																																																																																																		1
TCCTCG	1																																																																																																																																																																																																																																		1
TCCTTA	2																																																																																																																																																																																																																																		2
TCGAAA	8	1																																																																																																																																																																																																																																	9
TCGAAG	2																																																																																																																																																																																																																																		2
TCGATA	5	1																																																																																																																																																																																																																																	6
TCGATC			2																																																																																																																																																																																																																																2
TCGATT	9	1	2	2																																																																																																																																																																																																																															14
TCGTCA	1																																																																																																																																																																																																																																		1
TCGTCC	1																																																																																																																																																																																																																																		1
TCGTGG		1																																																																																																																																																																																																																																	1
TCTCAG	1																																																																																																																																																																																																																																		1
TCTCTG	2																																																																																																																																																																																																																																		2
TCTGCT		1																																																																																																																																																																																																																																	1
TCTGGT	1																																																																																																																																																																																																																																		1
TCTGTC		1																																																																																																																																																																																																																																	1
TGAAAA	1																																																																																																																																																																																																																																		1
TGAAAT	4																																																																																																																																																																																																																																		4
TGAAGA	2																																																																																																																																																																																																																																		2
TGAATA	2																																																																																																																																																																																																																																		2
TGACAA		1																																																																																																																																																																																																																																	1
TGACGT		1																																																																																																																																																																																																																																	1
TGATAT	1																																																																																																																																																																																																																																		1
TGATTT		1	1																																																																																																																																																																																																																																2
TGCACG	1																																																																																																																																																																																																																																		1
TGCCTC		1																																																																																																																																																																																																																																	1
TGCTGT	1																																																																																																																																																																																																																																		1
TGGAAT	1																																																																																																																																																																																																																																		1
TGGTTT	2																																																																																																																																																																																																																																		2
TGTATT	1																																																																																																																																																																																																																																		1
TGTGTA	1																																																																																																																																																																																																																																		1
TGTTAT	1																																																																																																																																																																																																																																		1
TGTTTA	1																																																																																																																																																																																																																																		1
TGTTTT	5		1																																																																																																																																																																																																																																6
TTAAAA	2																																																																																																																																																																																																																																		2
TTAAAG	1																																																																																																																																																																																																																																		1
TTAACA	1																																																																																																																																																																																																																																		1
TTAAGA	1																																																																																																																																																																																																																																		1
TTAATG	1																																																																																																																																																																																																																																		1
TTAATT	2																																																																																																																																																																																																																																		2
TTACAA	1																																																																																																																																																																																																																																		1
TTATAA	1																																																																																																																																																																																																																																		1
TTATAT	1																																																																																																																																																																																																																																		1
TTATCA	1																																																																																																																																																																																																																																		1
TTATCC	1																																																																																																																																																																																																																																		1
TTATGA	1																																																																																																																																																																																																																																		1
TTATGT	1																																																																																																																																																																																																																																		1
TTATTG		1																																																																																																																																																																																																																																	1
TTATTT	7	2																																																																																																																																																																																																																																	9
TTCAAA	1																																																																																																																																																																																																																																		1
TTCAAT	2																																																																																																																																																																																																																																		2
TTCATC	2																																																																																																																																																																																																																																		2
TTCCCC	1																																																																																																																																																																																																																																		1
TTCCTC	1				1																																																																																																																																																																																																																														2
TTCGAT	9		1																																																																																																																																																																																																																																10
TTCGCA	1																																																																																																																																																																																																																																		1
TTCGCG											1																																																																																																																																																																																																																								1
TTCTAT	1																																																																																																																																																																																																																																		1
TTCTCC		1												1																																																																																																																																																																																																																					2
TTCTGG	1																																																																																																																																																																																																																																		1
TTCTTT	5																																																																																																																																																																																																																																		5
TTGAAA	4																																																																																																																																																																																																																																		4
TTGAAT	2																																																																																																																																																																																																																																		2
TTGACT	1																																																																																																																																																																																																																																		1
TTGATA				1																																																																																																																																																																																																																															1
TTGATT	2																																																																																																																																																																																																																																		2
TTGGAT	1																																																																																																																																																																																																																																		1
TTGTAT	1																																																																																																																																																																																																																																		1
TTGTCT	1																																																																																																																																																																																																																																		1
TTGTTA	4																																																																																																																																																																																																																																		4
TTGTTT	1																																																																																																																																																																																																																																		1
TTTAAA	4																																																																																																																																																																																																																																		4
TTTAAG	2																																																																																																																																																																																																																																		2
TTTAAT	4																																																																																																																																																																																																																																		4
TTTACA	2																																																																																																																																																																																																																																		2
TTTAGC	1																																																																																																																																																																																																																																		1
TTTATA	2																																																																																																																																																																																																																																		2
TTTATC			1																																																																																																																																																																																																																																1
TTTATG	1			1																																																																																																																																																																																																																															2
TTTATT	10																																																																																																																																																																																																																																		10
TTTCAA	5																																																																																																																																																																																																																																		5
TTTCAC	1																																																																																																																																																																																																																																		1
TTTCAT	1																																																																																																																																																																																																																																		1
TTTCGA	3																																																																																																																																																																																																																																		3
TTTCTT	3																																																																																																																																																																																																																																		3
TTTGAA	3			1																																																																																																																																																																																																																															4
TTTGAT	4	1																																																																																																																																																																																																																																	5
TTTGCG	2	1																																																																																																																																																																																																																																	3
TTTGGA	3																																																																																																																																																																																																																																		3
TTTGTT	3																																																																																																																																																																																																																																		3
TTTTAA	10																																																																																																																																																																																																																																		10
TTTTAT	5																																																																																																																																																																																																																																		5
TTTTCA	2																																																																																																																																																																																																																																		2
TTTTCT	4																																																																																																																																																																																																																																		4
TTTTGA	8	3																																																																																																																																																																																																																																	11
TTTTGG	1																																																																																																																																																																																																																																		1
TTTTGT	4	1																																																																																																																																																																																																																																	5
TTTTTA	16	2																																																																																																																																																																																																																																	18
TTTTTC	1																																																																																																																																																																																																																																		1
TTTTTG	8	1																																																																																																																																																																																																																																	9

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	228	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	392	319	200	170	136	131	84	62	58	52	36	38	23	35	26	16	16	7	16	10	9	6	8	4	3	5	8	3	4	1	4	1	1	3	1	1	2	1		4		2	1	1	1	1	2	2						1			1	1			1			1					1																																		1																																																																																																											1913
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	31	30	18	20	15	10	13	10	11	12	3	5	6	3	3	3	4		4	4	3	2	3	1	1	2	4	2	2	1	2	1	1	1	1	1										2				1	3	2	1	1	2		1		1			1	1				1	1		1			1																																		2	1																																																																																																					1	257
AC/GT	-	-	-	103	40	35	19	12	2	3	7	3	1			2	1				1									1																																																																																																																																																																																																					230
AG/CT	-	-	-	203	95	55	47	23	18	10	4	6	3	2	2	1	3	2	3	4	1	2	1	1	2	1		2	1	2	1				2	1			1		1			1						1																																																																																																																																																																																	502
AT/AT	-	-	-	360	139	44	22	19	12	7	3	9	5		4	1	1	1			1																																																																																																																																																																																																														628
CG/CG	-	-	-	58	24	12	4		1	1																																																																																																																																																																																																																									100
AAC/GTT	-	-	79	28	21	8	4	3	2	1	2	2		1			1	1			1																																																																																																																																																																																																														154
AAG/CTT	-	-	100	42	15	6	3	4		2	1		2	1	1	1			1									1																																																																																																																																																																																																							180
AAT/ATT	-	-	467	193	92	50	33	27	18	13	12	11	13	8	5	4	6	6	2	1			1	1			1		1											1																																																																																																																																																																																											966
ACC/GGT	-	-	9	5	1	1																																																																																																																																																																																																																													16
ACG/CGT	-	-	20	8	3	4	1	1	1																																																																																																																																																																																																																										38
ACT/AGT	-	-	13	10	4	3	1		3																																																																																																																																																																																																																										34
AGC/CTG	-	-	17	6	1		2	2		1			1																																																																																																																																																																																																																						30
AGG/CCT	-	-	13	1	4	1					1																																																																																																																																																																																																																								20
ATC/ATG	-	-	76	25	17	10	3	3	1		2				1		1		1																																																																																																																																																																																																																140
CCG/CGG	-	-	7	4		2	2	2	1																																																																																																																																																																																																																										18
AAAC/GTTT	-	237	124	41	26	17	17	7	6	4	2	2	1	1																																																																																																																																																																																																																					485
AAAG/CTTT	-	26	6	3								1																																																																																																																																																																																																																							36
AAAT/ATTT	-	481	163	57	21	7	3	3	3	3									1																																																																																																																																																																																																																742
AACC/GGTT	-	4	1																																																																																																																																																																																																																																5
AACG/CGTT	-	7	1																																																																																																																																																																																																																																8
AACT/AGTT	-	108	35	19	10	3	1	1	1	3	2	1		1					1																																																																																																																																																																																																																186
AAGG/CCTT	-	10	1	1			1																																																																																																																																																																																																																												13
AAGT/ACTT	-	2																																																																																																																																																																																																																																	2
AATC/ATTG	-	22	1																																																																																																																																																																																																																																23
AATG/ATTC	-	19	4	3																																																																																																																																																																																																																															26
AATT/AATT	-	274	63	18	5	1																																																																																																																																																																																																																													361
ACAG/CTGT	-	4																																																																																																																																																																																																																																	4
ACAT/ATGT	-	9	1		1																																																																																																																																																																																																																														11
ACCG/CGGT	-	2		1																																																																																																																																																																																																																															3
ACCT/AGGT	-	1				1																																																																																																																																																																																																																													2
ACGC/CGTG	-	1	1	1	1	1																																																																																																																																																																																																																													5
ACGG/CCGT	-	2																																																																																																																																																																																																																																	2
ACGT/ACGT	-	3																																																																																																																																																																																																																																	3
ACTC/AGTG	-	1																																																																																																																																																																																																																																	1
ACTG/AGTC	-	3		1		1																																																																																																																																																																																																																													5
AGAT/ATCT	-	7	1	1	1																																																																																																																																																																																																																														10
AGCC/CTGG	-		1																																																																																																																																																																																																																																1
AGCG/CGCT	-	7	1																																																																																																																																																																																																																																8
AGCT/AGCT	-	1																																																																																																																																																																																																																																	1
AGGG/CCCT	-	1	1																																																																																																																																																																																																																																2
ATCC/ATGG	-	1																																																																																																																																																																																																																																	1
ATCG/ATCG	-	2																																																																																																																																																																																																																																	2
ATGC/ATGC	-		1	1																																																																																																																																																																																																																															2
AAAAC/GTTTT	132	11	2																																																																																																																																																																																																																																145
AAAAG/CTTTT	105	2	3																																																																																																																																																																																																																																110
AAAAT/ATTTT	604	55	15	4	1	2		1																																																																																																																																																																																																																											682
AAACC/GGTTT	8	1																																																																																																																																																																																																																																	9
AAACG/CGTTT	16	3																																																																																																																																																																																																																																	19
AAACT/AGTTT	99	25	3	2	1			2			1																																																																																																																																																																																																																								133
AAAGG/CCTTT	6																																																																																																																																																																																																																																		6
AAAGT/ACTTT	17	2																																																																																																																																																																																																																																	19
AAATC/ATTTG	36	2																																																																																																																																																																																																																																	38
AAATG/ATTTC	62		2	1																																																																																																																																																																																																																															65
AAATT/AATTT	281	38	14	3																																																																																																																																																																																																																															336
AACAC/GTGTT	4			1	1																																																																																																																																																																																																																														6
AACAG/CTGTT	2																																																																																																																																																																																																																																		2
AACAT/ATGTT	46	2						1																																																																																																																																																																																																																											49
AACCC/GGGTT	1																																																																																																																																																																																																																																		1
AACCG/CGGTT	1																																																																																																																																																																																																																																		1
AACCT/AGGTT	41	4		1																																																																																																																																																																																																																															46
AACGG/CCGTT	2																																																																																																																																																																																																																																		2
AACGT/ACGTT	6																																																																																																																																																																																																																																		6
AACTC/AGTTG	3	3	2																																																																																																																																																																																																																																8
AACTG/AGTTC	2		1																																																																																																																																																																																																																																3
AACTT/AAGTT	37	6										1																																																																																																																																																																																																																							44
AAGAC/CTTGT		1	1																																																																																																																																																																																																																																2
AAGAG/CTCTT	11	1																																																																																																																																																																																																																																	12
AAGAT/ATCTT	14	1																																																																																																																																																																																																																																	15
AAGCC/CTTGG	1																																																																																																																																																																																																																																		1
AAGCG/CGCTT	1																																																																																																																																																																																																																																		1
AAGCT/AGCTT	699	547	253	177	85	47	24	17	9	7	8	4	2	1		1							1																																																																																																																																																																																																												1882
AAGGC/CCTTG	1	1																																																																																																																																																																																																																																	2
AAGGG/CCCTT	1	1																																																																																																																																																																																																																																	2
AAGGT/ACCTT	1																																																																																																																																																																																																																																		1
AAGTG/ACTTC	8	1																																																																																																																																																																																																																																	9
AATAC/ATTGT	22	1	2																																																																																																																																																																																																																																25
AATAG/ATTCT	9	4	1																																																																																																																																																																																																																																14
AATAT/ATATT	118	10	2																																																																																																																																																																																																																																130
AATCC/ATTGG	5																																																																																																																																																																																																																																		5
AATCG/ATTCG	12	2																																																																																																																																																																																																																																	14
AATCT/AGATT	16	3																																																																																																																																																																																																																																	19
AATGC/ATTGC	3																																																																																																																																																																																																																																		3
AATGG/ATTCC	36	16	14	3	2	5	1	1	2	1																																																																																																																																																																																																																									81
AATGT/ACATT	27	1																																																																																																																																																																																																																																	28
AATTC/AATTG	38	3	1	1	1																																																																																																																																																																																																																														44
ACACC/GGTGT	3																																																																																																																																																																																																																																		3
ACACG/CGTGT	2	1																																																																																																																																																																																																																																	3
ACACT/AGTGT	1	1																																																																																																																																																																																																																																	2
ACAGG/CCTGT	1																																																																																																																																																																																																																																		1
ACAGT/ACTGT	1																																																																																																																																																																																																																																		1
ACATC/ATGTG	1																																																																																																																																																																																																																																		1
ACATG/ATGTC	4	2																																																																																																																																																																																																																																	6
ACCCC/GGGGT	3																																																																																																																																																																																																																																		3
ACCCG/CGGGT	3																																																																																																																																																																																																																																		3
ACCGC/CGGTG	1																																																																																																																																																																																																																																		1
ACCGT/ACGGT	3																																																																																																																																																																																																																																		3
ACCTG/AGGTC	1																																																																																																																																																																																																																																		1
ACGAT/ATCGT	2																																																																																																																																																																																																																																		2
ACGCG/CGCGT	3																																																																																																																																																																																																																																		3
ACGGC/CCGTG	1																																																																																																																																																																																																																																		1
ACGGG/CCCGT	1																																																																																																																																																																																																																																		1
ACGTC/ACGTG	1																																																																																																																																																																																																																																		1
ACTAG/AGTCT	4			1																																																																																																																																																																																																																															5
ACTAT/AGTAT	6																																																																																																																																																																																																																																		6
ACTCC/AGTGG	2																																																																																																																																																																																																																																		2
ACTCG/AGTCG	7																																																																																																																																																																																																																																		7
ACTGG/AGTCC	1																																																																																																																																																																																																																																		1
AGAGG/CCTCT	1																																																																																																																																																																																																																																		1
AGATC/ATCTG	3																																																																																																																																																																																																																																		3
AGATG/ATCTC	1																																																																																																																																																																																																																																		1
AGCAT/ATGCT	1																																																																																																																																																																																																																																		1
AGCCG/CGGCT		1																																																																																																																																																																																																																																	1
AGCTC/AGCTG	8	1																																																																																																																																																																																																																																	9
AGGAT/ATCCT	6			2																																																																																																																																																																																																																															8
AGGCG/CCTCG	1																																																																																																																																																																																																																																		1
AGGGG/CCCCT	13	1																																																																																																																																																																																																																																	14
ATATC/ATATG	1	1	1																																																																																																																																																																																																																																3
ATCCG/ATCGG	3																																																																																																																																																																																																																																		3
ATCGC/ATGCG		1																																																																																																																																																																																																																																	1
CCCCG/CGGGG	1																																																																																																																																																																																																																																		1
CCCGG/CCGGG	2																																																																																																																																																																																																																																		2
CCGCG/CGCGG	9																																																																																																																																																																																																																																		9
AAAAAC/GTTTTT	47	6	1																																																																																																																																																																																																																																54
AAAAAG/CTTTTT	32	1		1																																																																																																																																																																																																																															34
AAAAAT/ATTTTT	151	12	2	1																																																																																																																																																																																																																															166
AAAACC/GGTTTT	5																																																																																																																																																																																																																																		5
AAAACG/CGTTTT	3																																																																																																																																																																																																																																		3
AAAACT/AGTTTT	1																																																																																																																																																																																																																																		1
AAAAGG/CCTTTT	1																																																																																																																																																																																																																																		1
AAAATC/ATTTTG	97	9	1																																																																																																																																																																																																																																107
AAAATG/ATTTTC	15																																																																																																																																																																																																																																		15
AAAATT/AATTTT	54	3				1																																																																																																																																																																																																																													58
AAACAC/GTGTTT	1																																																																																																																																																																																																																																		1
AAACAT/ATGTTT	15	2		1																																																																																																																																																																																																																															18
AAACCC/GGGTTT	1																																																																																																																																																																																																																																		1
AAACGC/CGTTTG	4	1																																																																																																																																																																																																																																	5
AAACTC/AGTTTG	1																																																																																																																																																																																																																																		1
AAACTG/AGTTTC	1																																																																																																																																																																																																																																		1
AAACTT/AAGTTT	4		1																																																																																																																																																																																																																																5
AAAGAC/CTTTGT	2																																																																																																																																																																																																																																		2
AAAGAT/ATCTTT	1		1																																																																																																																																																																																																																																2
AAAGCT/AGCTTT	1																																																																																																																																																																																																																																		1
AAAGGG/CCCTTT	1																																																																																																																																																																																																																																		1
AAAGGT/ACCTTT	1																																																																																																																																																																																																																																		1
AAAGTC/ACTTTG	2																																																																																																																																																																																																																																		2
AAAGTG/ACTTTC	1																																																																																																																																																																																																																																		1
AAAGTT/AACTTT	4	1			1																																																																																																																																																																																																																														6
AAATAC/ATTTGT	5																																																																																																																																																																																																																																		5
AAATAG/ATTTCT	3																																																																																																																																																																																																																																		3
AAATAT/ATATTT	25	2																																																																																																																																																																																																																																	27
AAATCC/ATTTGG	17	3	2																																																																																																																																																																																																																																22
AAATCG/ATTTCG	74	9	5	3		1																																																																																																																																																																																																																													92
AAATCT/AGATTT	1																																																																																																																																																																																																																																		1
AAATGC/ATTTGC	1																																																																																																																																																																																																																																		1
AAATGG/ATTTCC	1																																																																																																																																																																																																																																		1
AAATGT/ACATTT	5					1																																																																																																																																																																																																																													6
AAATTC/AATTTG	25	2		1																																																																																																																																																																																																																															28
AAATTG/AATTTC	44	1																																																																																																																																																																																																																																	45
AAATTT/AAATTT	16																																																																																																																																																																																																																																		16
AACAAG/CTTGTT	2																																																																																																																																																																																																																																		2
AACAAT/ATTGTT	12	3																																																																																																																																																																																																																																	15
AACAGC/CTGTTG	3																																																																																																																																																																																																																																		3
AACAGT/ACTGTT		1																																																																																																																																																																																																																																	1
AACATT/AATGTT	5																																																																																																																																																																																																																																		5
AACCAG/CTGGTT	2	1																																																																																																																																																																																																																																	3
AACCCG/CGGGTT	1																																																																																																																																																																																																																																		1
AACCGC/CGGTTG	3																																																																																																																																																																																																																																		3
AACCTC/AGGTTG	1																																																																																																																																																																																																																																		1
AACCTG/AGGTTC		1																																																																																																																																																																																																																																	1
AACGCG/CGCGTT	2		1								1																																																																																																																																																																																																																								4
AACGTC/ACGTTG		1																																																																																																																																																																																																																																	1
AACTAC/AGTTGT	3	1			1																																																																																																																																																																																																																														5
AACTCC/AGTTGG	1																																																																																																																																																																																																																																		1
AACTCG/AGTTCG		1																																																																																																																																																																																																																																	1
AACTGT/ACAGTT	1																																																																																																																																																																																																																																		1
AACTTC/AAGTTG		1																																																																																																																																																																																																																																	1
AAGAAT/ATTCTT	2																																																																																																																																																																																																																																		2
AAGAGG/CCTCTT	5				1																																																																																																																																																																																																																														6
AAGAGT/ACTCTT	1	1																																																																																																																																																																																																																																	2
AAGATC/ATCTTG	1																																																																																																																																																																																																																																		1
AAGATG/ATCTTC	5																																																																																																																																																																																																																																		5
AAGATT/AATCTT	3																																																																																																																																																																																																																																		3
AAGCAG/CTGCTT	1	1																																																																																																																																																																																																																																	2
AAGCTC/AGCTTG	1																																																																																																																																																																																																																																		1
AAGCTG/AGCTTC	1																																																																																																																																																																																																																																		1
AAGGAC/CCTTGT		1																																																																																																																																																																																																																																	1
AAGGAG/CCTTCT		3		1			1							1																																																																																																																																																																																																																					6
AAGGAT/ATCCTT	29	1	1																																																																																																																																																																																																																																31
AAGGGG/CCCCTT	2																																																																																																																																																																																																																																		2
AAGGTC/ACCTTG	2	1																																																																																																																																																																																																																																	3
AAGGTG/ACCTTC	1																																																																																																																																																																																																																																		1
AAGTCC/ACTTGG	1																																																																																																																																																																																																																																		1
AAGTCG/ACTTCG	7	2	1																																																																																																																																																																																																																																10
AAGTCT/ACTTAG	1																																																																																																																																																																																																																																		1
AAGTGT/ACACTT	1																																																																																																																																																																																																																																		1
AATACC/ATTGGT	1																																																																																																																																																																																																																																		1
AATACT/AGTATT		1																																																																																																																																																																																																																																	1
AATAGG/ATTCCT	1																																																																																																																																																																																																																																		1
AATAGT/ACTATT		1																																																																																																																																																																																																																																	1
AATATC/ATATTG	2			1																																																																																																																																																																																																																															3
AATATG/ATATTC	5	2																																																																																																																																																																																																																																	7
AATATT/AATATT	7	1																																																																																																																																																																																																																																	8
AATCAC/ATTGTG	1																																																																																																																																																																																																																																		1
AATCAG/ATTCTG	1																																																																																																																																																																																																																																		1
AATCAT/ATGATT	3						1																																																																																																																																																																																																																												4
AATCGG/ATTCCG	1																																																																																																																																																																																																																																		1
AATCGT/ACGATT	1																																																																																																																																																																																																																																		1
AATCTC/AGATTG	1																																																																																																																																																																																																																																		1
AATCTG/AGATTC	2																																																																																																																																																																																																																																		2
AATGAC/ATTGTC		1																																																																																																																																																																																																																																	1
AATGAT/ATCATT	8	1																																																																																																																																																																																																																																	9
AATGCG/ATTCGC	1																																																																																																																																																																																																																																		1
AATTAC/AATTGT	4																																																																																																																																																																																																																																		4
AATTAG/AATTCT	5																																																																																																																																																																																																																																		5
AATTAT/AATTAT	15																																																																																																																																																																																																																																		15
AATTCC/AATTGG	1																																																																																																																																																																																																																																		1
ACACAT/ATGTGT	1																																																																																																																																																																																																																																		1
ACACGC/CGTGTG	2					1																																																																																																																																																																																																																													3
ACACGG/CCGTGT	3	3																																																																																																																																																																																																																																	6
ACACGT/ACGTGT	4																																																																																																																																																																																																																																		4
ACAGAG/CTCTGT	2	1																																																																																																																																																																																																																																	3
ACAGTG/ACTGTC	1																																																																																																																																																																																																																																		1
ACATAT/ATATGT	3	1																																																																																																																																																																																																																																	4
ACCACG/CGTGGT		1																																																																																																																																																																																																																																	1
ACCACT/AGTGGT	1																																																																																																																																																																																																																																		1
ACCATC/ATGGTG		1																																																																																																																																																																																																																																	1
ACCATG/ATGGTC	1																																																																																																																																																																																																																																		1
ACCCCC/GGGGGT	1	1																																																																																																																																																																																																																																	2
ACCCCG/CGGGGT	1																																																																																																																																																																																																																																		1
ACCCGC/CGGGTG	2																																																																																																																																																																																																																																		2
ACCCTC/AGGGTG	1																																																																																																																																																																																																																																		1
ACCGCC/CGGTGG	1																																																																																																																																																																																																																																		1
ACCGTG/ACGGTC	1																																																																																																																																																																																																																																		1
ACCTAG/AGGTCT	1																																																																																																																																																																																																																																		1
ACCTCC/AGGTGG		1																																																																																																																																																																																																																																	1
ACCTCG/AGGTCG	1																																																																																																																																																																																																																																		1
ACGAGG/CCTCGT	2																																																																																																																																																																																																																																		2
ACGATG/ATCGTC	2																																																																																																																																																																																																																																		2
ACGCCG/CGGCGT		1		1																																																																																																																																																																																																																															2
ACGCGG/CCGCGT	1																																																																																																																																																																																																																																		1
ACGCTG/AGCGTC	1																																																																																																																																																																																																																																		1
ACGTGC/ACGTGC	1																																																																																																																																																																																																																																		1
ACTATC/AGTGAT	1																																																																																																																																																																																																																																		1
ACTCCG/AGTCGG			1																																																																																																																																																																																																																																1
ACTGAG/AGTCTC	1																																																																																																																																																																																																																																		1
AGAGCG/CGCTCT	58	5	1																																																																																																																																																																																																																																64
AGAGGC/CCTCTG		1																																																																																																																																																																																																																																	1
AGAGGG/CCCTCT		1																																																																																																																																																																																																																																	1
AGATAT/ATATCT	4																																																																																																																																																																																																																																		4
AGATCG/ATCTCG	2		2																																																																																																																																																																																																																																4
AGCCTG/AGGCTC	1																																																																																																																																																																																																																																		1
AGGATG/ATCCTC	1																																																																																																																																																																																																																																		1
AGGGGG/CCCCCT	1																																																																																																																																																																																																																																		1
ATATCC/ATATGG	8																																																																																																																																																																																																																																		8
ATATCG/ATATCG	7	1																																																																																																																																																																																																																																	8
ATCATG/ATCATG	1																																																																																																																																																																																																																																		1
ATCCGC/ATGCGG	2																																																																																																																																																																																																																																		2
CCCCCG/CGGGGG	1																																																																																																																																																																																																																																		1
