Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_022817505.1/fasta/hub_GCA_022817505.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              233742
Total size of examined sequences (bp):           190785161
Total number of identified SSRs:                 26772
Number of SSR containing sequences:              22342
Number of sequences containing more than 1 SSR:  3236
Number of SSRs present in compound formation:    2400


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	3112
2	11536
3	2534
4	2561
5	4754
6	2275

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	106	95	93	71	73	73	45	45	49	43	26	32	20	9	14	9	14	8	10	8	6	7	2	4	3	4	3	1	1	1	3	5	3		2	4		1	1	2	1	1						1	1		2					1				1				1		1				1		1							1																														909
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	70	40	43	20	22	31	30	23	14	9	10	5	12	7	3	5	5	4	4	6	3	1	1	6	2	2	1	4	6	2	2	1	2	1	2	1	3	2	2	1	2	2	1	1					1		2	3										1	1		1		1	1					1	1	1		1	2												1																	1		433
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	96	70	57	39	39	38	25	15	17	22	16	13	8	15	6	9	7	3	4	10	3	2	4	6	4	1	3	4		2	4	2	4	4	4	2	3	1	2	2	3		1	2	2			2	1	3		1		1		1	2									1		1								1	1	1			1			1										1		1					1	1	1			1	1	2	601
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	148	107	107	103	78	83	70	70	54	43	39	28	26	23	16	12	17	6	10	6	8	7	10	13	4	5	6	5	3	3	3	1		2	3	1	2	4	3	3	1	1	4	2	2	1	4	2		3	2		1	1	1	2		1			1				1		1		1					2																											1		1					1	1169
AC	-	-	-	153	71	44	29	9	11	11	7	6	7	1	2	2	1				1		1																																																																																																							356
AG	-	-	-	180	120	71	38	26	12	10	2	7	4	2	4	1	1	3	1		1				1				1																																																																																																	485
AT	-	-	-	1575	902	579	373	219	132	76	51	45	27	20	15	12	11	6	2	4	1		2		1																																																																																																					4053
CA	-	-	-	138	63	41	20	9	12	8	10	3	4	3		2	3	2				1																																																																																																								319
CG	-	-	-	109	45	11	7																																																																																																																							172
CT	-	-	-	159	111	67	36	19	11	5	5	5	2	2		1		3		1							1									1																																																																																										429
GA	-	-	-	200	113	79	50	22	7	14	8	1	2	3	4	2		2	1		2								1																																																																																																	511
GC	-	-	-	65	22	8	3																																																																																																																							98
GT	-	-	-	112	49	23	18	12	14	13	5	1	3	3	2			3				1																																																																																																								259
TA	-	-	-	1534	815	508	288	199	103	66	44	28	33	17	9	9	7	6	7	2	1	2	1																																																																																																							3679
TC	-	-	-	242	160	119	60	38	14	12	9	5	6	8	3	4	1	2	1	1	1	2																																																																																																								688
TG	-	-	-	193	99	62	28	29	16	15	9	6	2	5	5	8	3	2	2				1			1					1																																																																																															487
AAC	-	-	18	7		1				1																																																																																																																				27
AAG	-	-	42	9	10	8	2	1																																																																																																																						72
AAT	-	-	224	53	30	10	3	2	2		1																																																																																																																			325
ACA	-	-	14	5	4	3	1																																																																																																																							27
ACC	-	-	5		2	1																																																																																																																								8
ACG	-	-	12	2	1	1																																																																																																																								16
ACT	-	-	7																																																																																																																											7
AGA	-	-	20	20	5		2	1	1																																																																																																																					49
AGC	-	-	3		1		1																																																																																																																							5
AGG	-	-	7	3	1	1		2																																																																																																																						14
AGT	-	-		3																																																																																																																										3
ATA	-	-	139	37	16	6	2	2	1	1																																																																																																																				204
ATC	-	-	11	5				2																																																																																																																						18
ATG	-	-	10	6	3	1																																																																																																																								20
ATT	-	-	161	56	28	12	5	4	2	1																																																																																																																				269
CAA	-	-	12	4	5		3																																																																																																																							24
CAC	-	-	3	2																																																																																																																										5
CAG	-	-	8	2		1																																																																																																																								11
CAT	-	-	12	2	5	4			1																																																																																																																					24
CCA	-	-	3	1	1																																																																																																																									5
CCG	-	-	2	1	1	1	1																																																																																																																							6
CCT	-	-	5	8	1	1			1																																																																																																																					16
CGA	-	-	10	9	5			1			1																1																																																																																																			27
CGC	-	-	3	4		2																																																																																																																								9
CGG	-	-	4	1				1																																																																																																																						6
CGT	-	-	6	2	2		1	1	1	1																																																																																																																				14
CTA	-	-			1																																																																																																																									1
CTC	-	-	12	7	1																																																																																																																									20
CTG	-	-	2	4		1																																																																																																																								7
CTT	-	-	30	10	5	4	1	2	1																																																																																																																					53
GAA	-	-	42	14	4	2	1	1			1																																																																																																																			65
GAC	-	-	9	6	1	2																																																																																																																								18
GAG	-	-	11	4		2	1	1																																																																																																																						19
GAT	-	-	7	4		3	2																																																																																																																							16
GCA	-	-	3																																																																																																																											3
GCC	-	-	2	1																																																																																																																										3
GCG	-	-	9	2	1	1																																																																																																																								13
GCT	-	-	4																																																																																																																											4
GGA	-	-	6	12	3	1																																																																																																																								22
GGC	-	-	8	2	1	1	1																																																																																																																							13
GGT	-	-	2	2																																																																																																																										4
GTA	-	-	1																																																																																																																											1
GTC	-	-	13	6	1	1	1																				1																																																																																																			23
GTG	-	-	7	2			2	1																																																																																																																						12
GTT	-	-	14	5	2		1																																																																																																																							22
TAA	-	-	116	40	14	7	5																																																																																																																							182
TAC	-	-	2	2																																																																																																																										4
TAG	-	-	4	6	1																																																																																																																									11
TAT	-	-	128	44	12	7	2	1																																																																																																																						194
TCA	-	-	16	5	3	2	1	1	1		1		1																																																																																																																	31
TCC	-	-	12	3	3	3	1	1					1																																																																																																																	24
TCG	-	-	19	7	3	2	3													1																																																																																																										35
TCT	-	-	28	12	10	3	2		1																																																																																																																					56
TGA	-	-	9	3	1	3		2	2																																																																																																																					20
TGC	-	-	8		1			1																																																																																																																						10
TGG	-	-	4		1				1																																																																																																																					6
TGT	-	-	24	10	5	1																																																																																																																								40
TTA	-	-	178	55	30	13	5	3			1																																																																																																																			285
TTC	-	-	30	17	6	2	3	2	1																																																																																																																					61
TTG	-	-	24	13	6	2																																																																																																																								45
AAAC	-	51	12	3	1																																																																																																																									67
AAAG	-	19	8	1																	1																																																																																																									29
AAAT	-	189	41	15	5												1																																																																																																													251
AACA	-	6	2																																																																																																																											8
AACT	-	4	2																																																																																																																											6
AAGA	-	4																																																																																																																												4
AAGC	-	1																																																																																																																												1
AAGG	-	7	3																																																																																																																											10
AAGT	-	1																																																																																																																												1
AATA	-	151	40	12	6	1		1																																																																																																																						211
AATC	-	9	6	2			1																																																																																																																							18
AATG	-	9	2		1																																																																																																																									12
AATT	-	56	6	2	2																																																																																																																									66
ACAA	-	4	2																																																																																																																											6
ACAT	-	1																																																																																																																												1
ACCC	-	1																																																																																																																												1
ACCT	-			1																																																																																																																										1
ACGA	-	1		1																																																																																																																										2
ACGC	-	1																																																																																																																												1
ACTA	-	2				1																																																																																																																								3
AGAA	-	7	2		1																																																																																																																									10
AGAC	-	2																																																																																																																												2
AGAT	-	1							1																																																																																																																					2
AGCG	-	1																																																																																																																												1
AGGA	-	4																																																																																																																												4
AGGC	-								1																																																																																																																					1
AGGG	-		1	1																																																																																																																										2
AGGT	-	2		1																																																																																																																										3
AGTC	-	1																																																																																																																												1
AGTG	-	2																																																																																																																												2
ATAA	-	114	30	7	3	2			1																																																																																																																					157
ATAC	-	5	3							1																																																																																																																				9
ATAG	-	5	3	1																																																																																																																										9
ATCA	-	3	1	2	1																																																																																																																									7
ATCC	-	1																																																																																																																												1
ATCG	-	3	1																																																																																																																											4
ATCT	-	1	1		1																																																																																																																									3
ATGA	-	3	1																																																																																																																											4
ATGC	-	1																																																																																																																												1
ATGG	-	1											1																																																																																																																	2
ATGT	-	3	1					1																																																																																																																						5
ATTA	-	35	14	5																																																																																																																										54
ATTC	-	5	1																																																																																																																											6
ATTG	-	8	5	1																																																																																																																										14
ATTT	-	119	27	11	5	1		1																																																																																																																						164
CAAA	-	11	2																																																																																																																											13
CAAC	-	1	1																																																																																																																											2
CAAG	-	1																																																																																																																												1
CAAT	-	6	5	1	2																																																																																																																									14
CACC	-	3																																																																																																																												3
CACG	-	1																																																																																																																												1
CAGT	-	1																																																																																																																												1
CATA	-	3		1	1																																																																																																																									5
CATC	-		1	1		1			1																																																																																																																					4
CATT	-	3	2																																																																																																																											5
CCAA	-	2																																																																																																																												2
CCCT	-	1	1																																																																																																																											2
CCGC	-	1																																																																																																																												1
CCTC	-	3		1																																																																																																																										4
CCTT	-	1																																																																																																																												1
CGAA	-	3																																																																																																																												3
CGAG	-	2		1																																																																																																																										3
CGAT	-	2																																																																																																																												2
CGCA	-	2																																																																																																																												2
CGCT	-		1																																																																																																																											1
CGGA	-	1	1																																																																																																																											2
CGTA	-	1																																																																																																																												1
CGTC	-		1																																																																																																																											1
CGTT	-	1																																																																																																																												1
CTAA	-	2																																																																																																																												2
CTAC	-																	1					1																																																																																																							2
CTAT	-	1																																																																																																																												1
CTCA	-	1	1																																																																																																																											2
CTCC	-	4																																																																																																																												4
CTGA	-	2																																																																																																																												2
CTGT	-	1	1																																																																																																																											2
CTTC	-	2				1																																																																																																																								3
CTTT	-	7																																																																																																																												7
GAAA	-	5	1	1	3			1																																																																																																																						11
GAAC	-	1																																																																																																																												1
GAAG	-	1		1																																																																																																																										2
GAAT	-	6																																																																																																																												6
GACA	-	2																																																																																																																												2
GAGC	-			1																																																																																																																										1
GAGG	-	4																																																																																																																												4
GATA	-	2																																																																																																																												2
GATC	-	1	2		1																																																																																																																									4
GATG	-	1																																																																																																																												1
GATT	-	11	8	2	1	1										1																																																																																																														24
GCAA	-	1																																																																																																																												1
GCAC	-			2																																																																																																																										2
GCCG	-	2																																																																																																																												2
GCCT	-	1	1																																																																																																																											2
GCGA	-	1																																																																																																																												1
GCGT	-	1	1																																																																																																																											2
GCTC	-	1	1	1																																																																																																																										3
GCTG	-	1																																																																																																																												1
GGAG	-	2				1																																																																																																																								3
GGAT	-	1			1																																																																																																																									2
GGCC	-	2																																																																																																																												2
GGCG	-	2																																																																																																																												2
GGGA	-	5				1		1																																																																																																																						7
GGGC	-	2																																																																																																																												2
GGGT	-	4																																																																																																																												4
GGTA	-	1				1																																																																																																																								2
GGTC	-		1																																																																																																																											1
GTAC	-	2																																																																																																																												2
GTAG	-						2																																																																																																																							2
GTAT	-	7				1																																																																																																																								8
GTCG	-	1																																																																																																																												1
GTGA	-	1																																																																																																																												1
GTGC	-	1																																																																																																																												1
GTTA	-	1																																																																																																																												1
GTTC	-	1																																																																																																																												1
GTTT	-	8																																																																																																																												8
TAAA	-	131	29	11	3	2		1																																																																																																																						177
TAAC	-		1																																																																																																																											1
TAAG	-	1		1																																																																																																																										2
TAAT	-	41	7	2	1																																																																																																																									51
TACA	-	2		1			1																																																																																																																							4
TACC	-	1																																																																																																																												1
TAGA	-	2			1																																																																																																																									3
TAGT	-					1																																																																																																																								1
TATC	-	3	2	1	1																																																																																																																									7
TATG	-	4	2	3		1																																																																																																																								10
TATT	-	133	33	13	3	3			1		1																																																																																																																			187
TCAA	-	3	1																																																																																																																											4
TCAT	-	3	1																																																																																																																											4
TCCA	-	2								1																																																																																																																				3
TCCC	-	4		1	1																																																																																																																									6
TCCT	-	1		1																																																																																																																										2
TCGA	-	1																																																																																																																												1
TCGT	-		1																																																																																																																											1
TCTA	-	3	3		1	1																																																																																																																								8
TCTG	-	1																																																																																																																												1
TCTT	-	6	3	1																																																																																																																										10
TGAA	-	3																																																																																																																												3
TGAT	-	6	2	1				2																																																																																																																						11
TGCA	-	1																																																																																																																												1
TGGA	-	2				1																																																																																																																								3
TGTA	-	9																																																																																																																												9
TGTC	-	1																																																																																																																												1
TGTT	-	3	3																																																																																																																											6
TTAA	-	52	11	1																																																																																																																										64
TTAC	-	2																																																																																																																												2
TTAG	-	1																																																																																																																												1
TTAT	-	163	35	15	3	1		1																																																																																																																						218
TTCA	-	5	4	1																																																																																																																										10
TTCC	-	2	1	1																																																																																																																										4
TTCT	-	4	2			1																																																																																																																								7
TTGA	-	4	2			1	1																																																																																																																							8
TTGT	-	10	3	1																																																																																																																										14
TTTA	-	190	44	19	5	4	2																																																																																																																							264
TTTC	-	11	3	1		1																																																																																																																								16
TTTG	-	35	8	2	1																																																																																																																									46
AAAAC	53	4	1	1																																																																																																																										59
AAAAG	34	4	1																																																																																																																											39
AAAAT	199	10	3																																																																																																																											212
AAACA	37	4									1																																																																																																																			42
AAACC	9																																																																																																																													9
AAACG	2																																																																																																																													2
AAACT	5																																																																																																																													5
AAAGA	15																																																																																																																													15
AAAGG	2		1																																																																																																																											3
AAAGT	3																																																																																																																													3
AAATA	119	2																																																																																																																												121
AAATC	4																																																																																																																													4
AAATG	12																																																																																																																													12
AAATT	142	3	2																																																																																																																											147
AACAA	26	2																																																																																																																												28
AACAC	3																																																																																																																													3
AACAT	5																																																																																																																													5
AACCA		1																																																																																																																												1
AACCG	1																																																																																																																													1
AACCT	2	1																																																																																																																												3
AACGA	2																																																																																																																													2
AACTA	1																																																																																																																													1
AACTC	1																																																																																																																													1
AACTG	1																																																																																																																													1
AACTT	6		1																																																																																																																											7
AAGAA	8																																																																																																																													8
AAGAC	1																																																																																																																													1
AAGAG	2																																																																																																																													2
AAGAT	1																																																																																																																													1
AAGCA		1																																																																																																																												1
AAGCC	1																																																																																																																													1
AAGGT	1																																																																																																																													1
AAGTA	6																																																																																																																													6
AAGTG	1																																																																																																																													1
AATAA	99	7	1	1																																																																																																																										108
AATAC	1																																																																																																																													1
AATAG	3	1																																																																																																																												4
AATAT	43	5																																																																																																																												48
AATCA	8																																																																																																																													8
AATCG	3																																																																																																																													3
AATCT	5																																																																																																																													5
AATGA	11																																																																																																																													11
AATGG	7	1	1		1																																																																																																																									10
AATGT	6																																																																																																																													6
AATTA	86	6	3																																																																																																																											95
AATTC	11		1																																																																																																																											12
AATTG	13																																																																																																																													13
AATTT	159	8	2																																																																																																																											169
ACAAA	21																																																																																																																													21
ACAAC	3																																																																																																																													3
ACAAT	7																																																																																																																													7
ACACA	2																																																																																																																													2
ACATA	2																																																																																																																													2
ACATT	1	1																																																																																																																												2
ACCAC	1																																																																																																																													1
ACCCC	1																																																																																																																													1
ACCTA	2																																																																																																																													2
ACCTT	1																																																																																																																													1
ACGAA			1																																																																																																																											1
ACGAC	1																																																																																																																													1
ACGAG	1																																																																																																																													1
ACGCA	2																																																																																																																													2
ACGGA	1																																																																																																																													1
ACGGT	1																																																																																																																													1
ACGTA	1																																																																																																																													1
ACGTC	2																																																																																																																													2
ACTAG	2																																																																																																																													2
ACTCC	1																																																																																																																													1
ACTTA	1																																																																																																																													1
ACTTC	1																																																																																																																													1
ACTTT				1			1																																																																																																																							2
AGAAA	11																																																																																																																													11
AGAAC	1																																																																																																																													1
AGAAG	1																																																																																																																													1
AGAAT	1	1																																																																																																																												2
AGAGG	1																																																																																																																													1
AGATA	8																																																																																																																													8
AGATT	1	1	1	1																																																																																																																										4
AGGAG	1																																																																																																																													1
AGGGC	1																																																																																																																													1
AGGGG	3																																																																																																																													3
AGGTC	1																																																																																																																													1
AGGTT	1																																																																																																																													1
AGTAA	3																																																																																																																													3
AGTAT	1																																																																																																																													1
AGTCG	1																																																																																																																													1
AGTGA	1																																																																																																																													1
AGTTA	1																																																																																																																													1
AGTTC	1																																																																																																																													1
ATAAA	83	3																																																																																																																												86
ATAAC	5																																																																																																																													5
ATAAG	2																																																																																																																													2
ATAAT	47	1	2										1																																																																																																																	51
ATACA	7		1																																																																																																																											8
ATACG	1	1																																																																																																																												2
ATACT		2																																																																																																																												2
ATAGA	1	1																																																																																																																												2
ATAGC	1																																																																																																																													1
ATAGT	2																																																																																																																													2
ATATA	59	4	1																																																																																																																											64
ATATC	3																																																																																																																													3
ATATG	3																																																																																																																													3
ATATT	39	2																																																																																																																												41
ATCAA	3																																																																																																																													3
ATCAC	1																																																																																																																													1
ATCAG	2																																																																																																																													2
ATCAT	2																																																																																																																													2
ATCCC	1																																																																																																																													1
ATCGA	4																																																																																																																													4
ATCGC	1																																																																																																																													1
ATCGT	3	1																																																																																																																												4
ATCTA	1																																																																																																																													1
ATCTG	2																																																																																																																													2
ATCTT	2	1																																																																																																																												3
ATGAA	9																																																																																																																													9
ATGAC	1																																																																																																																													1
ATGAT	2																																																																																																																													2
ATGCC	1																																																																																																																													1
ATGGA	3				1																																																																																																																									4
ATGTA	3																																																																																																																													3
ATGTC	12																																																																																																																													12
ATGTG	1																																																																																																																													1
ATGTT	3		1																																																																																																																											4
ATTAA	63	1	2																																																																																																																											66
ATTAC	5																																																																																																																													5
ATTAG	3	1																																																																																																																												4
ATTAT	33	3	1																																																																																																																											37
ATTCA	10	1																																																																																																																												11
ATTCC	6	8	4	2	1	1	2	2																																																																																																																						26
ATTCG	2	1																																																																																																																												3
ATTCT	2																																																																																																																													2
ATTGA	4	1																																																																																																																												5
ATTGC	1																																																																																																																													1
ATTGG	2																																																																																																																													2
ATTGT	3																																																																																																																													3
ATTTA	54			1																																																																																																																										55
ATTTC	20																																																																																																																													20
ATTTG	15	1																																																																																																																												16
ATTTT	169	9	1																																																																																																																											179
CAAAA	71	4	1	1																																																																																																																										77
CAAAC	4																																																																																																																													4
CAAAT	5																																																																																																																													5
CAACA	1																																																																																																																													1
CAACT	1	1																																																																																																																												2
CAAGA	1																																																																																																																													1
CAAGT	1																																																																																																																													1
CAATA	2																																																																																																																													2
CAATT	7	2																																																																																																																												9
CACAA	1																																																																																																																													1
CACAC	2																																																																																																																													2
CACCA	2																																																																																																																													2
CACCC	1																																																																																																																													1
CACTC	1																																																																																																																													1
CAGAA	2																																																																																																																													2
CAGTA	1																																																																																																																													1
CATAA	2																																																																																																																													2
CATAT		1																																																																																																																												1
CATCC	1																																																																																																																													1
CATTA		1																																																																																																																												1
CATTC	6	3			1	1	2																																																																																																																							13
CATTG	1																																																																																																																													1
CATTT	6	1	1																																																																																																																											8
CCACA	1																																																																																																																													1
CCACC	2	1																																																																																																																												3
CCATT		1																																																																																																																												1
CCCCA	3																																																																																																																													3
CCCCT	4																																																																																																																													4
CCCTC	2																																																																																																																													2
CCCTT	2																																																																																																																													2
CCGAC	1																																																																																																																													1
CCGCC	1																																																																																																																													1
CCGCG	1																																																																																																																													1
CCGTT	1																																																																																																																													1
CCTAA		1																																																																																																																												1
CCTCC	2																																																																																																																													2
CCTCT	1																																																																																																																													1
CGAAA	1																																																																																																																													1
CGAAG	1																																																																																																																													1
CGAAT	1																																																																																																																													1
CGACG	2																																																																																																																													2
CGACT	1																																																																																																																													1
CGAGA	1																																																																																																																													1
CGATA	1	3																																																																																																																												4
CGATG	1																																																																																																																													1
CGATT	1																																																																																																																													1
CGCCC	1																																																																																																																													1
CGCCG	2																																																																																																																													2
CGCGT	1																																																																																																																													1
CGGCA	1																																																																																																																													1
CGGCC	1																																																																																																																													1
CGGGT	2	1																																																																																																																												3
CGGTA		1																																																																																																																												1
CGTAA	1																																																																																																																													1
CGTAT	1																																																																																																																													1
CGTCG	1																																																																																																																													1
CGTTT	3																																																																																																																													3
CTAAA	2		1																																																																																																																											3
CTAAC	1																																																																																																																													1
CTAGA	1																																																																																																																													1
CTATT	3																																																																																																																													3
CTCAA	2																																																																																																																													2
CTCAC	1		1																																																																																																																											2
CTCCC	9																																																																																																																													9
CTCGA	1																																																																																																																													1
CTCGC	1																																																																																																																													1
CTCGT	1																																																																																																																													1
CTCTC	3																																																																																																																													3
CTCTG																					1																																																																																																									1
CTGTT	1																																																																																																																													1
CTTAA	1																																																																																																																													1
CTTCT	1																																																																																																																													1
CTTGT	1																																																																																																																													1
CTTTA	1																																																																																																																													1
CTTTC	1																																																																																																																													1
CTTTT	18	1																																																																																																																												19
GAAAA	30	1																																																																																																																												31
GAAAC	5																																																																																																																													5
GAAAG	5																																																																																																																													5
GAAAT	9																																																																																																																													9
GAACA	1																																																																																																																													1
GAACC	1																																																																																																																													1
GAACG	2	1																																																																																																																												3
GAAGA	1																																																																																																																													1
GAAGT	1																																																																																																																													1
GAATA	2																																																																																																																													2
GAATC	1																																																																																																																													1
GAATG	9	9	1		1																																																																																																																									20
GAATT	4																																																																																																																													4
GACAT	14																																																																																																																													14
GACCG	1																																																																																																																													1
GAGAA	2																																																																																																																													2
GAGAC	1																																																																																																																													1
GAGAG	2																																																																																																																													2
GAGAT	1																																																																																																																													1
GAGCC	1																																																																																																																													1
GAGCT	1																																																																																																																													1
GAGGA	3																																																																																																																													3
GAGGG	4																																																																																																																													4
GAGTA	1																																																																																																																													1
GAGTC	1																																																																																																																													1
GATAA	1																																																																																																																													1
GATCA	3																																																																																																																													3
GATCG	1																																																																																																																													1
GATGA	1																																																																																																																													1
GATGG	1																																																																																																																													1
GATTA	2	2																																																																																																																												4
GATTC	3																																																																																																																													3
GATTT	7																																																																																																																													7
GCAAA	1																																																																																																																													1
GCAGC	1																																																																																																																													1
GCAGT	1																																																																																																																													1
GCCCC	1																																																																																																																													1
GCCCG	1																																																																																																																													1
GCGAA		1																																																																																																																												1
GCGCC	1																																																																																																																													1
GCGGC	4																																																																																																																													4
GCGGG	1																																																																																																																													1
GCGTC	1																																																																																																																													1
GCTCG	1																																																																																																																													1
GCTTC	1																																																																																																																													1
GGAAA	3																																																																																																																													3
GGAAT	7	1	1	3		1																																																																																																																								13
GGAGA	2		1																																																																																																																											3
GGAGG	2			1																																																																																																																										3
GGATG	2																																																																																																																													2
GGCCA	1																																																																																																																													1
GGCGC		1																																																																																																																												1
GGCGT	1																																																																																																																													1
GGGAA	1																																																																																																																													1
GGGAG	2																																																																																																																													2
GGGCG	2																																																																																																																													2
GGGGA	8																																																																																																																													8
GGGGC	1																																																																																																																													1
GGGGT	7	1																																																																																																																												8
GGGTC			1																																																																																																																											1
GGGTG	1																																																																																																																													1
GGTCG		1					1																																																																																																																							2
GGTGG	2																																																																																																																													2
GGTGT	1																																																																																																																													1
GGTTA	2																																																																																																																													2
GTAAA	3																																																																																																																													3
GTAAT	1																																																																																																																													1
GTATA	1		1																																																																																																																											2
GTATC	3																																																																																																																													3
GTATT	2																																																																																																																													2
GTCAC	2																																																																																																																													2
GTCAT	1																																																																																																																													1
GTCCT	1																																																																																																																													1
GTCGC	1																																																																																																																													1
GTCGG				1																																																																																																																										1
GTCGT	1																																																																																																																													1
GTGAT	2																																																																																																																													2
GTGCC	1																																																																																																																													1
GTGGG	1																																																																																																																													1
GTGGT	2																																																																																																																													2
GTGTA	1																																																																																																																													1
GTGTG	4																																																																																																																													4
GTGTT	1																																																																																																																													1
GTTAA	4	1																																																																																																																												5
GTTAC			1																																																																																																																											1
GTTAG		1																																																																																																																												1
GTTAT	4																																																																																																																													4
GTTCA	1																																																																																																																													1
GTTCC			2																																																																																																																											2
GTTCT	1																																																																																																																													1
GTTGT	2																																																																																																																													2
GTTTA	2	1																																																																																																																												3
GTTTC	2																																																																																																																													2
GTTTG	2																																																																																																																													2
GTTTT	27	2																																																																																																																												29
TAAAA	130	3																																																																																																																												133
TAAAC	2																																																																																																																													2
TAAAG	3		1																																																																																																																											4
TAAAT	66	3																																																																																																																												69
TAACA	5	1																																																																																																																												6
TAACT	2																																																																																																																													2
TAAGA	1	1																																																																																																																												2
TAATA	38																																																																																																																													38
TAATC	3																																																																																																																													3
TAATG	9																																																																																																																													9
TAATT	66	2	2																																																																																																																											70
TACAA	3	2																																																																																																																												5
TACAT	4																																																																																																																													4
TACGA	3		1																																																																																																																											4
TACTA	3																																																																																																																													3
TACTC	1																																																																																																																													1
TACTT	3																																																																																																																													3
TAGAA	2																																																																																																																													2
TAGAT	2																																																																																																																													2
TAGTA	1																																																																																																																													1
TAGTT	6																																																																																																																													6
TATAA	47	5	2								1																																																																																																																			55
TATAC	3																																																																																																																													3
TATAG	4																																																																																																																													4
TATAT	49	5																1																																																																																																												55
TATCA	2	1																																																																																																																												3
TATCG	2	1																																																																																																																												3
TATCT	5																																																																																																																													5
TATGA	2																																																																																																																													2
TATGT	4																																																																																																																													4
TATTA	45	2	1																																																																																																																											48
TATTC	4																																																																																																																													4
TATTG	4	1																																																																																																																												5
TATTT	97	2	1																																																																																																																											100
TCAAA	8																																																																																																																													8
TCAAT	3	1																																																																																																																												4
TCACA		1																																																																																																																												1
TCAGA	1																																																																																																																													1
TCAGT	1																																																																																																																													1
TCATA	2																																																																																																																													2
TCATC	1																																																																																																																													1
TCATT	6																																																																																																																													6
TCCAT	5	1																																																																																																																												6
TCCCC	2																																																																																																																													2
TCCTT	2	1																																																																																																																												3
TCGAT	1																																																																																																																													1
TCGCC	1																																																																																																																													1
TCGGC	1																																																																																																																													1
TCGGG	1					1						1																																																																																																																		3
TCGGT	1																																																																																																																													1
TCGTA	3	1																																																																																																																												4
TCGTT	8																																																																																																																													8
TCTAA	1																																																																																																																													1
TCTCA	1																																																																																																																													1
TCTCG	3																																																																																																																													3
TCTGA	7	2	1																																																																																																																											10
TCTTC	2																																																																																																																													2
TCTTT	10	1																																																																																																																												11
TGAAA	15	1																																																																																																																												16
TGAAC	1																																																																																																																													1
TGAAG	2																																																																																																																													2
TGAAT	5																																																																																																																													5
TGACA	2																																																																																																																													2
TGACC													1																																																																																																																	1
TGAGA	1																																																																																																																													1
TGATA	2																																																																																																																													2
TGATT	5																																																																																																																													5
TGCAA	1	1																																																																																																																												2
TGCAG	1																																																																																																																													1
TGCCG	2																																																																																																																													2
TGCGC	1																																																																																																																													1
TGCTA	1																																																																																																																													1
TGCTC		1																																																																																																																												1
TGGAA	5	4	3		1	1																																																																																																																								14
TGGAC	1																																																																																																																													1
TGGAG	1																																																																																																																													1
TGGGC	1																																																																																																																													1
TGGGT	1																																																																																																																													1
TGGTA	1																																																																																																																													1
TGGTG	2																																																																																																																													2
TGGTT	1																																																																																																																													1
TGTAA	9																																																																																																																													9
TGTAT	2																																																																																																																													2
TGTCC	3																																																																																																																													3
TGTCG	1																																																																																																																													1
TGTGC	1																																																																																																																													1
TGTGG	1																																																																																																																													1
TGTGT	5																																																																																																																													5
TGTTA	6																																																																																																																													6
TGTTG	3																																																																																																																													3
TGTTT	71	2				1																																																																																																																								74
TTAAA	88	5	1	1																																																																																																																										95
TTAAC	2																																																																																																																													2
TTAAG	10	1																																																																																																																												11
TTAAT	67	2	1																																																																																																																											70
TTACA	7																																																																																																																													7
TTACG	1																																																																																																																													1
TTACT	2																																																																																																																													2
TTAGA	4	1																																																																																																																												5
TTAGG	1																																																																																																																													1
TTAGT	4																																																																																																																													4
TTATA	44	2	2				1																																																																																																																							49
TTATC	3	2	1																																																																																																																											6
TTATG	2																																																																																																																													2
TTATT	111	5																																																																																																																												116
TTCAA	9	1	1																																																																																																																											11
TTCAG	2																																																																																																																													2
TTCAT	7	1															2																																																																																																													10
TTCCA	9	5	2																																																																																																																											16
TTCCC	3																																																																																																																													3
TTCCG	2																																																																																																																													2
TTCCT	1																																																																																																																													1
TTCGA	7																																																																																																																													7
TTCGG	1	1																																																																																																																												2
TTCGT	1																																																																																																																													1
TTCTA	6																																																																																																																													6
TTCTG	1																																																																																																																													1
TTCTT	12	2																																																																																																																												14
TTGAA	10	1																																																																																																																												11
TTGAC	1																																																																																																																													1
TTGAG	2																																																																																																																													2
TTGAT	5																																																																																																																													5
TTGCA	2																																																																																																																													2
TTGCG	1																																																																																																																													1
TTGGG	1																																																																																																																													1
TTGGT	2																																																																																																																													2
TTGTA	2	1																																																																																																																												3
TTGTC	1																																																																																																																													1
TTGTG	1																																																																																																																													1
TTGTT	26	3																																																																																																																												29
TTTAA	105	4	3																																																																																																																											112
TTTAC	4																																																																																																																													4
TTTAG	5																																																																																																																													5
TTTAT	120	7	1	1																																																																																																																										129
TTTCA	17	2																																																																																																																												19
TTTCC	6																																																																																																																													6
TTTCG	7		2																																																																																																																											9
TTTCT	19																																																																																																																													19
TTTGA	11																																																																																																																													11
TTTGG	9																																																																																																																													9
TTTGT	32	1																																																																																																																												33
TTTTA	169	4	1																																																																																																																											174
TTTTC	43	5																																																																																																																												48
TTTTG	104	5																																																																																																																												109
AAAAAC	12				1																																																																																																																									13
AAAAAG	2																																																																																																																													2
AAAAAT	35																																																																																																																													35
AAAACA	10																	1																																																																																																												11
AAAACG	1																																																																																																																													1
AAAAGA	1																																																																																																																													1
AAAATA	8																																																																																																																													8
AAAATC	41	8	3	1	2									2																																																																																																																57
AAAATG	1																																																																																																																													1
AAAATT	12																																																																																																																													12
AAACAA	5	1																																																																																																																												6
AAACAG	1																																																																																																																													1
AAACAT	2																																																																																																																													2
AAACCG	1																																																																																																																													1
AAACTC	1																																																																																																																													1
AAACTG	1																																																																																																																													1
AAAGGG	1																																																																																																																													1
AAATAA	10																																																																																																																													10
AAATAC	1																																																																																																																													1
AAATAG	1																																																																																																																													1
AAATAT	8																																																																																																																													8
AAATCA	2							1	1																																																																																																																					4
AAATCG	9	2	2	1											2																																																																																																															16
AAATCT	2																																																																																																																													2
AAATGC	1																																																																																																																													1
AAATGT	4																																																																																																																													4
AAATTA	17	1	2																																																																																																																											20
AAATTC	143	17	6																																																																																																																											166
AAATTG	1																																																																																																																													1
AAATTT	43																																																																																																																													43
AACAAA	2																																																																																																																													2
AACATA			1																																																																																																																											1
AACATT	1																																																																																																																													1
AACTAA		1																																																																																																																												1
AACTTT	2																																																																																																																													2
AAGAAA	5																																																																																																																													5
AAGAGA	1																																																																																																																													1
AAGCAC																				1																																																																																																										1
AAGCCG	1																																																																																																																													1
AAGGAG	1																																																																																																																													1
AATAAA	8																																																																																																																													8
AATAAC	1																																																																																																																													1
AATACT	1																																																																																																																													1
AATATA	6																																																																																																																													6
AATATT	3																																																																																																																													3
AATCAA	10																																																																																																																													10
AATCAT	2																																																																																																																													2
AATCCG											1																																																																																																																			1
AATCGA	11	1	3	1																																																																																																																										16
AATCGC	2																																																																																																																													2
AATGAT	1																																																																																																																													1
AATGTA	1																																																																																																																													1
AATTAA	5																																																																																																																													5
AATTAT	5																																																																																																																													5
AATTCA	11	2	1																																																																																																																											14
AATTCC	1																																																																																																																													1
AATTGA	2																																																																																																																													2
AATTTA	5	1																																																																																																																												6
AATTTC	4																																																																																																																													4
AATTTG	12																																																																																																																													12
AATTTT	20																																																																																																																													20
ACAAAA	4																																																																																																																													4
ACAATA	3																																																																																																																													3
ACAATT	2																																																																																																																													2
ACACAA	1																																																																																																																													1
ACACGG	1																																																																																																																													1
ACAGAG	1																																																																																																																													1
ACAGTT	1																																																																																																																													1
ACATAA	2																																																																																																																													2
ACATAC	1																																																																																																																													1
ACATAT	1	1																																																																																																																												2
ACCCAC	1																																																																																																																													1
ACCCAT	1																																																																																																																													1
ACCCGG	1																																																																																																																													1
ACCGAA	5																																																																																																																													5
ACCGGA																			1																																																																																																											1
ACCTCT	1																																																																																																																													1
ACGACA	1																																																																																																																													1
ACGATT	1																																																																																																																													1
ACGCAA	1																																																																																																																													1
ACGGCA						1																																																																																																																								1
ACGGCG	1																																																																																																																													1
ACGGGA	1																																																																																																																													1
ACGTTT	1																																																																																																																													1
ACTAAA	2																																																																																																																													2
ACTTCA	1																																																																																																																													1
ACTTGT	1																																																																																																																													1
ACTTTT	3																																																																																																																													3
AGAAAA	1																																																																																																																													1
AGAAAT	1																																																																																																																													1
AGAATT	1																																																																																																																													1
AGACGA	1																																																																																																																													1
AGAGAA	1																																																																																																																													1
AGAGCA	1																																																																																																																													1
AGAGGA		1																																																																																																																												1
AGAGGG				2																																																																																																																										2
AGATTC			1																																																																																																																											1
AGCGAC	1																																																																																																																													1
AGCTCC	1																																																																																																																													1
AGGAAG	1																																																																																																																													1
AGGACA	1																																																																																																																													1
AGGCAC	1																																																																																																																													1
AGGGAG	3			1																																																																																																																										4
AGGGCT	1																																																																																																																													1
AGGTGG	1																																																																																																																													1
AGGTTC	1																																																																																																																													1
AGTAAA	1																																																																																																																													1
AGTTAC	1																																																																																																																													1
AGTTGC	1																																																																																																																													1
ATAAAA	7																																																																																																																													7
ATAAAC	8																																																																																																																													8
ATAAAG	1																																																																																																																													1
ATAAAT	5																																																																																																																													5
ATAATC	1																																																																																																																													1
ATAATT	17	2																																																																																																																												19
ATACAA	1																																																																																																																													1
ATACAT	1																																																																																																																													1
ATACTA	1																																																																																																																													1
ATAGAT	1																																																																																																																													1
ATATAA	5	1																																																																																																																												6
ATATAC	3											1																																																																																																																		4
ATATTA	3																																																																																																																													3
ATATTC	3																																																																																																																													3
ATATTG	1																																																																																																																													1
ATATTT	4																																																																																																																													4
ATCAAA	4	2																																																																																																																												6
ATCAGA	7																																																																																																																													7
ATCATT	1																																																																																																																													1
ATCCAG	1																																																																																																																													1
ATCCTA	1																																																																																																																													1
ATCCTG	1																																																																																																																													1
ATCGAA	2																																																																																																																													2
ATCTAT	1																																																																																																																													1
ATCTCT	1																																																																																																																													1
ATCTGA	2																																																																																																																													2
ATGAAA	1																																																																																																																													1
ATGAAG	1																																																																																																																													1
ATGATA	2																																																																																																																													2
ATGTAG	1																																																																																																																													1
ATGTAT		1		1																																																																																																																										2
ATGTGG	1																																																																																																																													1
ATGTGT	2																																																																																																																													2
ATGTTA	1																																																																																																																													1
ATGTTT	3		1																																																																																																																											4
ATTAAA	6	1																																																																																																																												7
ATTAAT	3																																																																																																																													3
ATTACA	1																																																																																																																													1
ATTATA	9																																																																																																																													9
ATTATC	2																																																																																																																													2
ATTATG	3																																																																																																																													3
ATTCAA	10	3																																																																																																																												13
ATTCAC		1																																																																																																																												1
ATTCAT	2																																																																																																																													2
ATTCGG	1																																																																																																																													1
ATTGCG	1																																																																																																																													1
ATTGGT	1																																																																																																																													1
ATTGTT	2																																																																																																																													2
ATTTAA	14																																																																																																																													14
ATTTAC	1																																																																																																																													1
ATTTAG	1																																																																																																																													1
ATTTAT	10																																																																																																																													10
ATTTCA	3																																																																																																																													3
ATTTCG	40	5													1																																																																																																															46
ATTTCT	2																																																																																																																													2
ATTTGA	23	1	2	1	1																																																																																																																									28
ATTTGG	1	1								1																																																																																																																				3
ATTTTA	8																																																																																																																													8
ATTTTG	26	2	1																																																																																																																											29
ATTTTT	14																																																																																																																													14
CAAAAA	2																																																																																																																													2
CAAAAT	3		1																																																																																																																											4
CAAATT	12		1																																																																																																																											13
CAACAC	1																																																																																																																													1
CAAGAG	1																																																																																																																													1
CAAGCA	1																																																																																																																													1
CAATTA	2																																																																																																																													2
CAATTT	1																																																																																																																													1
CACAAG	1																																																																																																																													1
CACACG	1										1																																																																																																																			2
CACAGC			1																																																																																																																											1
CACCAT	2																																																																																																																													2
CACCCA	1																																																																																																																													1
CACGGG							1		1																																																																																																																					2
CAGCAA	1																																																																																																																													1
CATAAA	1																																																																																																																													1
CATATA	1																																																																																																																													1
CATTAT	2																																																																																																																													2
CATTGA	1																																																																																																																													1
CATTGT	1	1																																																																																																																												2
CATTTT	6																																																																																																																													6
CCACAC	1																																																																																																																													1
CCATTT	1																																																																																																																													1
CCCCCA	3																																																																																																																													3
CCCCCT	2																																																																																																																													2
CCCCTT	1																																																																																																																													1
CCCTCC	4	2																																																																																																																												6
CCGCAT																		1																																																																																																												1
CCGGAA										1																																																																																																																				1
CCGGTT	1																																																																																																																													1
CCGTCG		1		1																																																																																																																										2
CCGTGC			1																																																																																																																											1
CCGTTG			1							1																																																																																																																				2
CCTCGA	1		1												1																																																																																																															3
CCTCTC		1		1																																																																																																																										2
CCTGGC	1																																																																																																																													1
CGAAAT		2																																																																																																																												2
CGAAGA		1																																																																																																																												1
CGACAA	1																																																																																																																													1
CGACCC	2																																																																																																																													2
CGACGG	1	2		1																																																																																																																										4
CGATGA	1																																																																																																																													1
CGCACA	1																																																																																																																													1
CGCGAG	1																																																																																																																													1
CGGAAC		1																																																																																																																												1
CGGATT															1																																																																																																															1
CGGCAC	2																																																																																																																													2
CGGCGA	2																																																																																																																													2
CGGCTT	1																																																																																																																													1
CGGTTC	3																																																																																																																													3
CGGTTT	3																																																																																																																													3
CGTCGC	1								1																																																																																																																					2
CGTGTG	2												1																																																																																																																	3
CGTTGC			1																																																																																																																											1
CGTTGT	1																																																																																																																													1
CTAACC		1																																																																																																																												1
CTAAGT	1																																																																																																																													1
CTATAT	1																																																																																																																													1
CTATTA	1																																																																																																																													1
CTCCCC	2																																																																																																																													2
CTCCCT	1						1																																																																																																																							2
CTCTCC	5		1	1																																																																																																																										7
CTCTGT	2																																																																																																																													2
CTCTTT	1																																																																																																																													1
CTGTTT	1																																																																																																																													1
CTTCCT	1																																																																																																																													1
CTTCGA	1																																																																																																																													1
CTTCGT	1																																																																																																																													1
CTTCTA	2																																																																																																																													2
CTTGAT	1																																																																																																																													1
CTTGTG											1																																																																																																																			1
CTTTTA	1																																																																																																																													1
CTTTTG	1																																																																																																																													1
CTTTTT	4																																																																																																																													4
GAAAAA	1																																																																																																																													1
GAAAAT	2																																																																																																																													2
GAAACC	1																																																																																																																													1
GAAATA	1																																																																																																																													1
GAAATC	4	3	1				1					1																																																																																																																		10
GAAATT	1																																																																																																																													1
GAACCG	1																																																																																																																													1
GAACGC	2																																																																																																																													2
GAAGGA	1																																																																																																																													1
GAATTT	7	1																																																																																																																												8
GACCTT	1																																																																																																																													1
GACGAG	1																																																																																																																													1
GACGGC				1																																																																																																																										1
GACTTC	1																																																																																																																													1
GAGAGG		1	2																																																																																																																											3
GAGATG	1																																																																																																																													1
GAGCTC		1																																																																																																																												1
GAGGGA		1		1																																																																																																																										2
GAGGGG	2																																																																																																																													2
GAGTGA	1																																																																																																																													1
GAGTTA	1																																																																																																																													1
GATAAT	1																																																																																																																													1
GATACC	1																																																																																																																													1
GATCAA	1																																																																																																																													1
GATGAA	1																																																																																																																													1
GATGTT	1																																																																																																																													1
GATTAC	1																																																																																																																													1
GATTCA	1																																																																																																																													1
GATTCG	1																1																																																																																																													2
GATTTA	1																																																																																																																													1
GATTTC	1			1																																																																																																																										2
GATTTG											1																																																																																																																			1
GATTTT	19	2																																																																																																																												21
GCACCG	1																																																																																																																													1
GCACGG								1																																																																																																																						1
GCACTT	1																																																																																																																													1
GCAGAA	1																																																																																																																													1
GCAGGG	1																																																																																																																													1
GCCCGA	1																																																																																																																													1
GCCCGT						1																																																																																																																								1
GCCCTT	1																																																																																																																													1
GCGACG	2	1																																																																																																																												3
GCGGTT		1																																																																																																																												1
GCGTGT			1																																																																																																																											1
GCTTGT	1																																																																																																																													1
GCTTTG				1																																																																																																																										1
GCTTTT		1																																																																																																																												1
GGAAGA	1																																																																																																																													1
GGAGAA	1																																																																																																																													1
GGATCT	1																																																																																																																													1
GGCACG	1																																																																																																																													1
GGCATG	1																																																																																																																													1
GGCCGC	1																																																																																																																													1
GGCCTT	1																																																																																																																													1
GGCGCT	1																																																																																																																													1
GGCGGT	1																																																																																																																													1
GGGAGA	1	1																																																																																																																												2
GGGCGG	1																																																																																																																													1
GGGGAG	1																																																																																																																													1
GGGGCG	1																																																																																																																													1
GGGGGA	3																																																																																																																													3
GGGGGC	2																																																																																																																													2
GGGGGT	4																																																																																																																													4
GGGTGG	2																																																																																																																													2
GGTAAA	1																																																																																																																													1
GGTCAA	1																																																																																																																													1
GGTCGA						1																																																																																																																								1
GGTGAT	1																																																																																																																													1
GGTTCC																				1																																																																																																										1
GGTTCT	1																																																																																																																													1
GGTTTT	1																																																																																																																													1
GTAAAA	2																																																																																																																													2
GTAATA	1																																																																																																																													1
GTAATT	1																																																																																																																													1
GTAGAT	1																																																																																																																													1
GTAGTT	1																																																																																																																													1
GTATAA	1																																																																																																																													1
GTATAT	1																																																																																																																													1
GTATGA	1																																																																																																																													1
GTATTG	1																																																																																																																													1
GTCACC	1																																																																																																																													1
GTCCTC	1																																																																																																																													1
GTCGGA	1																																																																																																																													1
GTCGTG	1																																																																																																																													1
GTCTCT	1																																																																																																																													1
GTGGCG	1		1																																																																																																																											2
GTGGGT	1																																																																																																																													1
GTGTAT	1																																																																																																																													1
GTGTGC	1					1																																																																																																																								2
GTTAAA	1																																																																																																																													1
GTTAAT	1																																																																																																																													1
GTTCTG	1																																																																																																																													1
GTTGCC	1																																																																																																																													1
GTTGTG	1																																																																																																																													1
GTTTAA	1																																																																																																																													1
GTTTGT		1																																																																																																																												1
GTTTTC	1																																																																																																																													1
GTTTTT	5																																																																																																																													5
TAAAAA	17	1																																																																																																																												18
TAAAAC	1																																																																																																																													1
TAAAAT	7																																																																																																																													7
TAAACA	4																																																																																																																													4
TAAATA	5																																																																																																																													5
TAAATG	2																																																																																																																													2
TAAATT	9																																																																																																																													9
TAACAA	1																																																																																																																													1
TAACCC	1																																																																																																																													1
TAAGTT	1																																																																																																																													1
TAATAT	4	1																																																																																																																												5
TAATGA	1																																																																																																																													1
TAATTA	4																																																																																																																													4
TAATTT	4	1																																																																																																																												5
TACAAA	1																																																																																																																													1
TACACA	1																																																																																																																													1
TACATA	3																																																																																																																													3
TACGAA	1																																																																																																																													1
TACTAT	1																																																																																																																													1
TACTTG	1																																																																																																																													1
TACTTT	1																																																																																																																													1
TAGATA		1																																																																																																																												1
TAGATT		1																																																																																																																												1
TAGTAA	1																																																																																																																													1
TAGTTG		1																																																																																																																												1
TATAAA	7																																																																																																																													7
TATAAT	9	1																																																																																																																												10
TATACC			1																																																																																																																											1
TATACT	2																																																																																																																													2
TATATG	6																																																																																																																													6
TATATT	5																																																																																																																													5
TATCAA	1																																																																																																																													1
TATCAT	1																																																																																																																													1
TATCCT	1																																																																																																																													1
TATCTC	1																																																																																																																													1
TATGAT		1																																																																																																																												1
TATGTA	3																																																																																																																													3
TATGTG	1																																																																																																																													1
TATTAA	4																																																																																																																													4
TATTAC	1																																																																																																																													1
TATTAG	1																																																																																																																													1
TATTCA	1																																																																																																																													1
TATTGA	2																																																																																																																													2
TATTTA	3	1																																																																																																																												4
TATTTT	17																																																																																																																													17
TCAAAA	5																																																																																																																													5
TCAAAT	6																																																																																																																													6
TCAACC	1																																																																																																																													1
TCAATT	1																																																																																																																													1
TCACCT	1																																																																																																																													1
TCAGAT	6																																																																																																																													6
TCATAT	2																																																																																																																													2
TCATTT	5		1																																																																																																																											6
TCCATA	1																																																																																																																													1
TCCCCC	3																																																																																																																													3
TCCCGC	1																																																																																																																													1
TCCCTC	2		2																																																																																																																											4
TCCGAA														1																																																																																																																1
TCCGGT		1													1																																																																																																															2
TCCTCT	1																																																																																																																													1
TCCTGT				1																																																																																																																										1
TCCTTC	1																																																																																																																													1
TCGAAA	1																																																																																																																													1
TCGAAC		1																																																																																																																												1
TCGAAG			1																																																																																																																											1
TCGATT	1																																																																																																																													1
TCGCGG	1																																																																																																																													1
TCGTCA	1																																																																																																																													1
TCGTCC	2																																																																																																																													2
TCGTCT	1																																																																																																																													1
TCTAAA	1																																																																																																																													1
TCTAGT	1																																																																																																																													1
TCTATA	1																																																																																																																													1
TCTCCC		1	1	1																																																																																																																										3
TCTCCT	1																																																																																																																													1
TCTCTA	1																																																																																																																													1
TCTCTG	1																																																																																																																													1
TCTCTT	1																																																																																																																													1
TCTGAA	1																																																																																																																													1
TCTGAT	9	1								1																																																																																																																				11
TCTGTC	1																																																																																																																													1
TCTTAA	1																																																																																																																													1
TCTTCA	2																																																																																																																													2
TCTTCC	2																																																																																																																													2
TCTTCG	1																																																																																																																													1
TCTTGA		1	1																																																																																																																											2
TCTTTA	2																																																																																																																													2
TCTTTC	2																																																																																																																													2
TCTTTG	1																																																																																																																													1
TCTTTT	2																																																																																																																													2
TGAAAA	1																																																																																																																													1
TGAACA	1																																																																																																																													1
TGAAGA	1																																																																																																																													1
TGAATT	17	2																																																																																																																												19
TGATAA	1																																																																																																																													1
TGATTC		1																																																																																																																												1
TGATTG	1										1																																																																																																																			2
TGATTT		1																																																																																																																												1
TGCCGT	1	1	1																																																																																																																											3
TGCGAT	1																																																																																																																													1
TGCTTG																		1																																																																																																												1
TGGAAG	1																																																																																																																													1
TGGATG	1																																																																																																																													1
TGGGGG	1																																																																																																																													1
TGTAAC	1																																																																																																																													1
TGTATA	1																																																																																																																													1
TGTATG	2																																																																																																																													2
TGTCAT	2																																																																																																																													2
TGTGCG	1	1																																																																																																																												2
TGTGTA	1																																																																																																																													1
TGTTAA	2																																																																																																																													2
TGTTAC	1																																																																																																																													1
TGTTAT	1																																																																																																																													1
TGTTGC	1																																																																																																																													1
TGTTTA	8	4																																																																																																																												12
TGTTTT	8	1							1																																																																																																																					10
TTAAAA	14																																																																																																																													14
TTAAAG	1																																																																																																																													1
TTAAAT	12																																																																																																																													12
TTAAGA	1																																																																																																																													1
TTAATA	2																																																																																																																													2
TTAATT	13																																																																																																																													13
TTACAA	1																																																																																																																													1
TTACAG	1																																																																																																																													1
TTAGAG	1																																																																																																																													1
TTAGTA	1																																																																																																																													1
TTATAA	5																																																																																																																													5
TTATAT	5																																																																																																																													5
TTATCC	1																																																																																																																													1
TTATCT	1																																																																																																																													1
TTATGA		1																																																																																																																												1
TTATGT	1																																																																																																																													1
TTATTC		1																																																																																																																												1
TTATTT	12																																																																																																																													12
TTCAAA	21	2			1																																																																																																																									24
TTCAAG	1																																																																																																																													1
TTCAAT	2																																																																																																																													2
TTCATA	1																																																																																																																													1
TTCATC	2																																																																																																																													2
TTCATG	1																																																																																																																													1
TTCATT	2																																																																																																																													2
TTCCAA	1																																																																																																																													1
TTCCCT				1																																																																																																																										1
TTCCGG							1		1	1																																																																																																																				3
TTCGAC		1				1																																																																																																																								2
TTCGAG				2																																																																																																																										2
TTCGAT	3	1																																																																																																																												4
TTCGCG	2																																																																																																																													2
TTCGGT	3																																																																																																																													3
TTCGTC	1																																																																																																																													1
TTCGTT	1																																																																																																																													1
TTCTAA	3																																																																																																																													3
TTCTCG	1																																																																																																																													1
TTCTTT	1																																																																																																																													1
TTGAAA	2																																																																																																																													2
TTGAAT	20	1																																																																																																																												21
TTGACT				1																																																																																																																										1
TTGATA		1																																																																																																																												1
TTGATT	5	3																																																																																																																												8
TTGCAA	1																																																																																																																													1
TTGCAG	1																																																																																																																													1
TTGCCG						1																																																																																																																								1
TTGGAA	1																																																																																																																													1
TTGGTG	1																																																																																																																													1
TTGTAA	2	1																																																																																																																												3
TTGTTA	1																																																																																																																													1
TTGTTC	1																																																																																																																													1
TTGTTT	9											1																																																																																																																		10
TTTAAA	20																																																																																																																													20
TTTAAC	2																																																																																																																													2
TTTAAT	16																																																																																																																													16
TTTACA	1	1																																																																																																																												2
TTTACT		1																																																																																																																												1
TTTATA	9					1																																																																																																																								10
TTTATC	2																																																																																																																													2
TTTATT	10	1																																																																																																																												11
TTTCAA	4																																																																																																																													4
TTTCAT	4			1																																																																																																																										5
TTTCGA	6	1																																																																																																																												7
TTTCGT	1																																																																																																																													1
TTTCTC	3																																																																																																																													3
TTTCTT	3																																																																																																																													3
TTTGAA	219	14	6																																																																																																																											239
TTTGAT	17	1	2																																																																																																																											20
TTTGCT				2																																																																																																																										2
TTTGGA	2																																																																																																																													2
TTTGTA	1																																																																																																																													1
TTTGTT	6							1																																																																																																																						7
TTTTAA	13																																																																																																																													13
TTTTAC	2																																																																																																																													2
TTTTAG	1																																																																																																																													1
TTTTAT	13		1																																																																																																																											14
TTTTCA	3																																																																																																																													3
TTTTCT	5																																																																																																																													5
TTTTGA	51	5	4	2																																																																																																																										62
TTTTGC		4																																																																																																																												4
TTTTGG	1																																																																																																																													1
TTTTGT	9	1																																																																																																																												10
TTTTTA	22	3																																																																																																																												25
TTTTTC	12																																																																																																																													12
TTTTTG	23	4		1																																																																																																																										28

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	254	202	200	174	151	156	115	115	103	86	65	60	46	32	30	21	31	14	20	14	14	14	12	17	7	9	9	6	4	4	6	6	3	2	5	5	2	5	4	5	2	2	4	2	2	1	4	3	1	3	4		1	1	1	3		1		1	1			1	1	1	1		1	1		1		2					1																						1		1					1	2078
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	166	110	100	59	61	69	55	38	31	31	26	18	20	22	9	14	12	7	8	16	6	3	5	12	6	3	4	8	6	4	6	3	6	5	6	3	6	3	4	3	5	2	2	3	2			2	2	3	2	4		1		1	2					1	1		1	1	1	2					1	1	1	1	2	3			1			1						1				1		1					1	1	1			1	2	2	1034
AC/GT	-	-	-	596	282	170	95	59	53	47	31	16	16	12	9	12	7	7	2		1	2	2			1					1																																																																																															1421
AG/CT	-	-	-	781	504	336	184	105	44	41	24	18	14	15	11	8	2	10	3	2	4	2			1		1		2							1																																																																																										2113
AT/AT	-	-	-	3109	1717	1087	661	418	235	142	95	73	60	37	24	21	18	12	9	6	2	2	3		1																																																																																																					7732
CG/CG	-	-	-	174	67	19	10																																																																																																																							270
AAC/GTT	-	-	106	44	22	7	5			1																																																																																																																				185
AAG/CTT	-	-	192	82	40	19	11	7	4		1																																																																																																																			356
AAT/ATT	-	-	946	285	130	55	22	12	5	2	2																																																																																																																			1459
ACC/GGT	-	-	24	7	4	1	2	1	1																																																																																																																					40
ACG/CGT	-	-	69	32	13	6	5	2	1	1	1									1							2																																																																																																			133
ACT/AGT	-	-	14	11	2																																																																																																																									27
AGC/CTG	-	-	28	6	2	2	1	1																																																																																																																						40
AGG/CCT	-	-	53	37	9	8	2	4	1				1																																																																																																																	115
ATC/ATG	-	-	65	25	12	13	3	5	4		1		1																																																																																																																	129
CCG/CGG	-	-	28	11	3	5	2	1																																																																																																																						50
AAAC/GTTT	-	128	32	6	2																																																																																																																									168
AAAG/CTTT	-	63	19	4	4	2		1													1																																																																																																									94
AAAT/ATTT	-	1190	279	103	33	14	2	4	2		1						1																																																																																																													1629
AACC/GGTT	-	3	1																																																																																																																											4
AACG/CGTT	-	7	1	1																																																																																																																										9
AACT/AGTT	-	10	3			2																																																																																																																								15
AAGC/CTTG	-	3																																																																																																																												3
AAGG/CCTT	-	18	4	3		1																																																																																																																								26
AAGT/ACTT	-	4		1																																																																																																																										5
AATC/ATTG	-	50	30	9	4	2	2	2								1																																																																																																														100
AATG/ATTC	-	37	11	1	1																																																																																																																									50
AATT/AATT	-	184	38	10	3																																																																																																																									235
ACAG/CTGT	-	7	1																																																																																																																											8
ACAT/ATGT	-	34	6	5	1	2	1	1		1																																																																																																																				51
ACCC/GGGT	-	8																																																																																																																												8
ACCG/CGGT	-	1	1																																																																																																																											2
ACCT/AGGT	-	4		2		1	2											1					1																																																																																																							11
ACGC/CGTG	-	6	1	2																																																																																																																										9
ACGG/CCGT	-	1	2																																																																																																																											3
ACGT/ACGT	-	3																																																																																																																												3
ACTC/AGTG	-	4	1																																																																																																																											5
ACTG/AGTC	-	4																																																																																																																												4
AGAT/ATCT	-	18	9	2	4	1			1																																																																																																																					35
AGCC/CTGG	-	1																																																																																																																												1
AGCG/CGCT	-	5	2	3																																																																																																																										10
AGGC/CCTG	-	1	1						1																																																																																																																					3
AGGG/CCCT	-	23	2	3	1	2		1																																																																																																																						32
ATCC/ATGG	-	8	1	1	1	2			1	1			1																																																																																																																	16
ATCG/ATCG	-	7	3		1																																																																																																																									11
ATGC/ATGC	-	2																																																																																																																												2
CCCG/CGGG	-	5																																																																																																																												5
CCGG/CCGG	-	4																																																																																																																												4
AAAAC/GTTTT	468	27	2	2		1					1																																																																																																																			501
AAAAG/CTTTT	200	14	1																																																																																																																											215
AAAAT/ATTTT	1296	52	8	2																																																																																																																										1358
AAACC/GGTTT	27	1																																																																																																																												28
AAACG/CGTTT	31		3																																																																																																																											34
AAACT/AGTTT	27	1	1																																																																																																																											29
AAAGC/CTTTG	1	1																																																																																																																												2
AAAGG/CCTTT	20	1	1																																																																																																																											22
AAAGT/ACTTT	28		1	1			1																																																																																																																							31
AAATC/ATTTG	71	1																																																																																																																												72
AAATG/ATTTC	112	5	1														2																																																																																																													120
AAATT/AATTT	896	34	16	2																																																																																																																										948
AACAC/GTGTT	22																																																																																																																													22
AACAG/CTGTT	7																																																																																																																													7
AACAT/ATGTT	38	1	1																																																																																																																											40
AACCC/GGGTT	2																																																																																																																													2
AACCG/CGGTT	4	1																																																																																																																												5
AACCT/AGGTT	9	3																																																																																																																												12
AACGC/CGTTG	3																																																																																																																													3
AACGG/CCGTT	6	1	2																																																																																																																											9
AACGT/ACGTT	3		1																																																																																																																											4
AACTC/AGTTG	6	1																																																																																																																												7
AACTG/AGTTC	7																																																																																																																													7
AACTT/AAGTT	27	2	1																																																																																																																											30
AAGAC/CTTGT	4																																																																																																																													4
AAGAG/CTCTT	9																																																																																																																													9
AAGAT/ATCTT	23	4	1																																																																																																																											28
AAGCC/CTTGG	1																																																																																																																													1
AAGCG/CGCTT	2	1																																																																																																																												3
AAGGG/CCCTT	6																																																																																																																													6
AAGGT/ACCTT	2																																																																																																																													2
AAGTC/ACTTG	2																																																																																																																													2
AAGTG/ACTTC	6																																																																																																																													6
AATAC/ATTGT	33	4	1																																																																																																																											38
AATAG/ATTCT	24	3																																																																																																																												27
AATAT/ATATT	444	29	9				1				1		1					1																																																																																																												486
AATCC/ATTGG	2																																																																																																																													2
AATCG/ATTCG	23	1																																																																																																																												24
AATCT/AGATT	22	5	1	1																																																																																																																										29
AATGC/ATTGC	5	1																																																																																																																												6
AATGG/ATTCC	57	33	12	5	6	4	4	2																																																																																																																						123
AATGT/ACATT	45	2																																																																																																																												47
AATTC/AATTG	76	7	2																																																																																																																											85
ACACC/GGTGT	16																																																																																																																													16
ACACG/CGTGT	3																																																																																																																													3
ACACT/AGTGT	1																																																																																																																													1
ACAGC/CTGTG	1																																																																																																																													1
ACAGG/CCTGT	4																																																																																																																													4
ACAGT/ACTGT	1																																																																																																																													1
ACATC/ATGTG	4	1																																																																																																																												5
ACATG/ATGTC	30																																																																																																																													30
ACCAT/ATGGT	1																																																																																																																													1
ACCCC/GGGGT	18	2																																																																																																																												20
ACCCG/CGGGT	4	2	1	1		1	1					1																																																																																																																		11
ACCGG/CCGGT	1																																																																																																																													1
ACCGT/ACGGT	1	1																																																																																																																												2
ACCTC/AGGTG	1		1																																																																																																																											2
ACCTG/AGGTC	1												1																																																																																																																	2
ACGAG/CGTCT	7																																																																																																																													7
ACGAT/ATCGT	17	7	1																																																																																																																											25
ACGCC/CGTGG	1																																																																																																																													1
ACGCG/CGCGT	6																																																																																																																													6
ACGGC/CCGTG	4																																																																																																																													4
ACGTC/ACGTG	4																																																																																																																													4
ACTAG/AGTCT	3																																																																																																																													3
ACTAT/AGTAT	15	2	1																																																																																																																											18
ACTCC/AGTGG	3																																																																																																																													3
ACTCG/AGTCG	4																																																																																																																													4
ACTCT/AGAGT	2																																																																																																																													2
ACTGC/AGTGC	2																																																																																																																													2
ACTGG/AGTCC	1																																																																																																																													1
AGAGC/CTCTG		1																			1																																																																																																									2
AGAGG/CCTCT	13		1																																																																																																																											14
AGATC/ATCTG	15	2	1																																																																																																																											18
AGATG/ATCTC	5																																																																																																																													5
AGCAT/ATGCT	2																																																																																																																													2
AGCCC/CTGGG	1																																																																																																																													1
AGCCG/CGGCT	3																																																																																																																													3
AGCGC/CGCTG	2																																																																																																																													2
AGCTC/AGCTG	1																																																																																																																													1
AGGCC/CCTGG	1																																																																																																																													1
AGGCG/CCTCG	2																																																																																																																													2
AGGGC/CCCTG	1																																																																																																																													1
AGGGG/CCCCT	38			1																																																																																																																										39
ATATC/ATATG	18	2																																																																																																																												20
ATCCC/ATGGG	5																																																																																																																													5
ATCCG/ATCGG	1																																																																																																																													1
ATCGC/ATGCG	2																																																																																																																													2
ATGCC/ATGGC	1																																																																																																																													1
CCCCG/CGGGG	7																																																																																																																													7
CCCGG/CCGGG	2																																																																																																																													2
CCGCG/CGCGG	8	1																																																																																																																												9
AAAAAC/GTTTTT	95	7		1	1			1	1			1						1																																																																																																												108
AAAAAG/CTTTTT	37																																																																																																																													37
AAAAAT/ATTTTT	173	5	1																																																																																																																											179
AAAACC/GGTTTT	2																																																																																																																													2
AAAACG/CGTTTT	4																																																																																																																													4
AAAACT/AGTTTT	4	1																																																																																																																												5
AAAAGC/CTTTTG	1	5		2																																																																																																																										8
AAAAGT/ACTTTT	10	1																																																																																																																												11
AAAATC/ATTTTG	183	24	11	3	2			1	1					2																																																																																																																227
AAAATG/ATTTTC	25		1	1																																																																																																																										27
AAAATT/AATTTT	135	3	2																																																																																																																											140
AAACAC/GTGTTT	1	1																																																																																																																												2
AAACAG/CTGTTT	2																																																																																																																													2
AAACAT/ATGTTT	29	4	2																																																																																																																											35
AAACCG/CGGTTT	13																																																																																																																													13
AAACGC/CGTTTG	1																																																																																																																													1
AAACGT/ACGTTT	1																																																																																																																													1
AAACTC/AGTTTG	1																																																																																																																													1
AAACTG/AGTTTC	1																																																																																																																													1
AAACTT/AAGTTT	2																																																																																																																													2
AAAGAC/CTTTGT	1																																																																																																																													1
AAAGAG/CTCTTT	9																																																																																																																													9
AAAGAT/ATCTTT	6																																																																																																																													6
AAAGCC/CTTTGG				1																																																																																																																										1
AAAGGG/CCCTTT	1			1																																																																																																																										2
AAAGGT/ACCTTT	1																																																																																																																													1
AAAGTC/ACTTTG				1																																																																																																																										1
AAAGTT/AACTTT	6																																																																																																																													6
AAATAC/ATTTGT	4																																																																																																																													4
AAATAG/ATTTCT	5																																																																																																																													5
AAATAT/ATATTT	72	2				1																																																																																																																								75
AAATCC/ATTTGG	3	1								1	1																																																																																																																			6
AAATCG/ATTTCG	78	15	6	3			1					1			3																																																																																																															107
AAATCT/AGATTT	5	1																																																																																																																												6
AAATGC/ATTTGC	1																																																																																																																													1
AAATGG/ATTTCC	1																																																																																																																													1
AAATGT/ACATTT	9	1																																																																																																																												10
AAATTC/AATTTG	501	43	16	1	2																																																																																																																									563
AAATTG/AATTTC	21																																																																																																																													21
AAATTT/AAATTT	103	1																																																																																																																												104
AACAAG/CTTGTT	1																																																																																																																													1
AACAAT/ATTGTT	9																																																																																																																													9
AACACC/GGTGTT	2																																																																																																																													2
AACAGC/CTGTTG	2																																																																																																																													2
AACAGG/CCTGTT				1																																																																																																																										1
AACAGT/ACTGTT	1																																																																																																																													1
AACATC/ATGTTG	1																																																																																																																													1
AACATG/ATGTTC	2																																																																																																																													2
AACATT/AATGTT	5																																																																																																																													5
AACCAC/GGTTGT	1																																																																																																																													1
AACCAG/CTGGTT	2																																																																																																																													2
AACCCT/AGGGTT	1	1																																																																																																																												2
AACCGC/CGGTTG		1																																																																																																																												1
AACCGG/CCGGTT	5	2					1		1	2					1				1	1																																																																																																										14
AACCTC/AGGTTG	1																																																																																																																													1
AACCTG/AGGTTC	1																																																																																																																													1
AACGAC/CGTTGT	3																																																																																																																													3
AACGAG/CGTTCT	1																																																																																																																													1
AACGCG/CGCGTT	4																																																																																																																													4
AACGGC/CCGTTG	2	1	3			2				1																																																																																																																				9
AACGGG/CCCGTT	1																																																																																																																													1
AACTAC/AGTTGT	1	1																																																																																																																												2
AACTAG/AGTTCT	1																																																																																																																													1
AACTCG/AGTTCG		1		2																																																																																																																										3
AACTCT/AGAGTT	2																																																																																																																													2
AACTGC/AGTTGC	2																																																																																																																													2
AACTGT/ACAGTT	4																																																																																																																													4
AACTTC/AAGTTG	1																																																																																																																													1
AACTTG/AAGTTC	1																																																																																																																													1
AAGAAT/ATTCTT		1																																																																																																																												1
AAGACG/CGTCTT	5	1																																																																																																																												6
AAGAGC/CTCTTG	2																																																																																																																													2
AAGAGG/CCTCTT	6	1																																																																																																																												7
AAGATC/ATCTTG	2	1	1																																																																																																																											4
AAGATG/ATCTTC	7																																																																																																																													7
AAGATT/AATCTT	2																																																																																																																													2
AAGCAC/CTTGTG	3										1							1		1																																																																																																										6
AAGCAG/CTGCTT	1																																																																																																																													1
AAGCCG/CGGCTT	2																																																																																																																													2
AAGGAC/CCTTGT	1																																																																																																																													1
AAGGAG/CCTTCT	5																																																																																																																													5
AAGGAT/ATCCTT	2																																																																																																																													2
AAGGCC/CCTTGG	1																																																																																																																													1
AAGGGC/CCCTTG	1																																																																																																																													1
AAGGGG/CCCCTT	1																																																																																																																													1
AAGGTC/ACCTTG	2																																																																																																																													2
AAGGTG/ACCTTC	1																																																																																																																													1
AAGTAC/ACTTGT	2																																																																																																																													2
AAGTAG/ACTTCT	2																																																																																																																													2
AAGTAT/ACTTAT	3																																																																																																																													3
AAGTCG/ACTTCG	2	1	1			1																																																																																																																								5
AAGTCT/ACTTAG	1																																																																																																																													1
AAGTGC/ACTTGC	1																																																																																																																													1
AAGTGG/ACTTCC	1																																																																																																																													1
AATACC/ATTGGT	2																																																																																																																													2
AATACG/ATTCGT	1																																																																																																																													1
AATACT/AGTATT	4																																																																																																																													4
AATAGT/ACTATT	5																																																																																																																													5
AATATC/ATATTG	4	1																																																																																																																												5
AATATG/ATATTC	9																																																																																																																													9
AATATT/AATATT	19	1																																																																																																																												20
AATCAC/ATTGTG	1										1																																																																																																																			2
AATCAG/ATTCTG	16	2								1																																																																																																																				19
AATCAT/ATGATT	6	2																																																																																																																												8
AATCCG/ATTCGG	2										1			1	1		1																																																																																																													6
AATCCT/AGGATT	1																																																																																																																													1
AATCGC/ATTGCG	4																																																																																																																													4
AATCGT/ACGATT	2																																																																																																																													2
AATCTG/AGATTC	10		1																																																																																																																											11
AATGAC/ATTGTC	3	1																																																																																																																												4
AATGAT/ATCATT	12																																																																																																																													12
AATGTC/ACATTG	1																																																																																																																													1
AATGTG/ACATTC		1																																																																																																																												1
AATTAC/AATTGT	9	1																																																																																																																												10
AATTAG/AATTCT	4																																																																																																																													4
AATTAT/AATTAT	49	3																																																																																																																												52
AATTCC/AATTGG	3																																																																																																																													3
AATTGC/AATTGC	1																																																																																																																													1
ACACAT/ATGTGT	9																																																																																																																													9
ACACCC/GGGTGT	4																																																																																																																													4
ACACGC/CGTGTG	6	1	1			1					1		1																																																																																																																	11
ACACGG/CCGTGT	1																																																																																																																													1
ACAGAG/CTCTGT	6																																																																																																																													6
ACAGCC/CTGTGG			1																																																																																																																											1
ACAGCG/CGCTGT	1																																																																																																																													1
ACAGGC/CCTGTG	1																																																																																																																													1
ACATAT/ATATGT	20	2		1								1																																																																																																																		24
ACATCC/ATGTGG	2																																																																																																																													2
ACATCT/AGATGT	2																																																																																																																													2
ACCACG/CGTGGT	1																																																																																																																													1
ACCATC/ATGGTG	3																																																																																																																													3
ACCCAT/ATGGGT	1																																																																																																																													1
ACCCCC/GGGGGT	10																																																																																																																													10
ACCCCG/CGGGGT	2																																																																																																																													2
ACCCGG/CCGGGT	1																																																																																																																													1
ACCGAT/ATCGGT	1																																																																																																																													1
ACCGCC/CGGTGG	2		1																																																																																																																											3
ACCGCG/CGCGGT	1																																																																																																																													1
ACCGGC/CCGGTG	3																																																																																																																													3
ACCGTC/ACGGTG	1																																																																																																																													1
ACCTAT/AGGTAT			1																																																																																																																											1
ACCTCC/AGGTGG	1																																																																																																																													1
ACCTCG/AGGTCG	1		1			1									1																																																																																																															4
ACCTCT/AGAGGT	1																																																																																																																													1
ACGAGG/CCTCGT	4																																																																																																																													4
ACGATG/ATCGTC	2																																																																																																																													2
ACGGCG/CCGTCG	7	4		3					1																																																																																																																					15
ACGGGC/CCCGTG	1		1			1	1	1	1																																																																																																																					6
ACTCAT/AGTATG	1																																																																																																																													1
ACTCCG/AGTCGG	1																																																																																																																													1
ACTCTC/AGAGTG	1																																																																																																																													1
AGAGAT/ATCTCT	3																																																																																																																													3
AGAGGG/CCCTCT	12	5	6	7			1																																																																																																																							31
AGATAT/ATATCT	4	1																																																																																																																												5
AGATCC/ATCTGG	2																																																																																																																													2
AGATGG/ATCTCC	1																																																																																																																													1
AGCCCG/CGGGCT	1																																																																																																																													1
AGCCCT/AGGGCT	1																																																																																																																													1
AGCGCC/CGCTGG	1																																																																																																																													1
AGCGCG/CGCGCT	1																																																																																																																													1
AGCGGG/CCCGCT	1																																																																																																																													1
AGCTCC/AGCTGG	1																																																																																																																													1
AGCTCG/AGCTCG		1																																																																																																																												1
AGGATC/ATCCTG	1																																																																																																																													1
AGGGCC/CCCTGG	1																																																																																																																													1
AGGGGC/CCCCTG	1																																																																																																																													1
AGGGGG/CCCCCT	17	2																																																																																																																												19
ATATCC/ATATGG	1																																																																																																																													1
ATCCGC/ATGCGG																		1																																																																																																												1
ATGCCC/ATGGGC	1																																																																																																																													1
CCCCCG/CGGGGG	4																																																																																																																													4
CCGCGG/CCGCGG	1																																																																																																																													1
