Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_022318145.1/fasta/hub_GCA_022318145.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              349221
Total size of examined sequences (bp):           136058999
Total number of identified SSRs:                 14867
Number of SSR containing sequences:              13938
Number of sequences containing more than 1 SSR:  767
Number of SSRs present in compound formation:    656


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	524
2	2150
3	2196
4	3630
5	5243
6	1124

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	17	8	3	1	3	2	6		5	1	1		2		1	1	2		1	1	2		2		1		1				1				1		1		1	1									1						3	1	1	2	74
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	15	10	11	9	10	10	6	6	5	5	9	7	5	7	1	2	8	3		1	5	2	1	1				1	3	1	1		1	1	1	1	1	1		1	1		1			1		1	1									178
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	15	11	8	13	10	3	16	11	4	6	11	4	3	4	6	3	4	6	2	3	5	5	2		2	2	1	2	1	3	2	1	2	1	1	1	1		2								1		1							1		199
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	5	4	3	4	1	6	3	1	4	2			1	1		1		1		1			1		2		1	1					1					1				1				1	1		1	2			1	2	5	2	3	73
AC	-	-	-	132	75	46	32	22	8	17	6	6	3	2	4	1			1		2	2		1			1									1																																								362
AG	-	-	-	48	26	11	9	7	3	5	7	1		2			1		2							1																																																		123
AT	-	-	-	122	46	15	8	9	5	2	3					1																																																												211
CA	-	-	-	89	56	27	13	16	7	6	3	2	2	2		1	2	1	1	1	1		1						2	1		1				1																																								236
CG	-	-	-	12																																																																								12
CT	-	-	-	25	15	15	5	5	2	3		2	1				2		1	1	1																																																							78
GA	-	-	-	25	16	8	7	5	2	2	1	2					1																																																											69
GC	-	-	-	20	4					1																																																																		25
GT	-	-	-	79	40	37	26	3	5	6	4	6	2	5	4	2		3	1		1	3	1	1	1								1																																											231
TA	-	-	-	159	43	20	15	3	3	4	3	2	1	1		1		1																																																										256
TC	-	-	-	38	17	14	17	9	5	4	6	1	1	1		1		2			1																																																							117
TG	-	-	-	165	78	50	39	24	25	9	10	7	3	1		2	3	1	3	1		1	1		1			1	1		1	2						1																																						430
AAC	-	-	10	9	1																																																																							20
AAG	-	-	24	6	3	3		2	1				1																																																															40
AAT	-	-	182	51	9	3	1	1	1				1																																																															249
ACA	-	-	7	13	2																																																																							22
ACC	-	-		2																																																																								2
ACG	-	-	2	1																																																																								3
ACT	-	-	8		1							1																																																																10
AGA	-	-	8	4	1	1																1																																																						15
AGC	-	-	4																																																																									4
AGG	-	-	2	1			1																																																																					4
AGT	-	-	7	2																																																																								9
ATA	-	-	225	49	11	4	1	1																																																																				291
ATC	-	-	22	2			1	1																																																																				26
ATG	-	-	17	5	1	1																																																																						24
ATT	-	-	150	35	5	4	2		1																																																																			197
CAA	-	-	12	6	4	1	1																																																																					24
CAC	-	-	3	1																																																																								4
CAG	-	-	2	1	1																																																																							4
CAT	-	-	15	2																																																																								17
CCA	-	-	1																																																																									1
CCG	-	-	11	2					1																																																																			14
CCT	-	-	2		1																																																																							3
CGA	-	-	1																																																																									1
CGC	-	-	14	6	2																																																																							22
CGG	-	-	6	2	2																																																																							10
CGT	-	-	1																																																																									1
CTA	-	-	5	4	3	2		1				2																																																																17
CTC	-	-	5																																																																									5
CTG	-	-	2																																																																									2
CTT	-	-	13	2	1	1	1																																																																					18
GAA	-	-	18	3	2	1				1		1																																																																26
GAC	-	-	1		1	1																																																																						3
GAG	-	-	4	1																																																																								5
GAT	-	-	17	1	2	1																																																																						21
GCA	-	-	2														1																																																											3
GCC	-	-	7	3	3	1																																																																						14
GCG	-	-	12	6	1	2																																																																						21
GCT	-	-	2			1																																																																						3
GGA	-	-	2																																																																									2
GGC	-	-	10	2																																																																								12
GGT	-	-	4																																																																									4
GTA	-	-	5	1		1																																																																						7
GTC	-	-	1																																																																									1
GTG	-	-	2																																																																									2
GTT	-	-	5	1																																																																								6
TAA	-	-	142	33	7	6	1	1																																																																				190
TAC	-	-	12	4	1																																																																							17
TAG	-	-	16	5	3	1																																																																						25
TAT	-	-	257	54	11	5	3		2																																																																			332
TCA	-	-	20	10	6	3	1																																																																					40
TCC	-	-	3		1																																																																							4
TCG	-	-	3																																																																									3
TCT	-	-	16	7	3	4	1	1					1		1	1																																																												35
TGA	-	-	20	6	3	1	1	1																																																																				32
TGC	-	-	5																																																																									5
TGG	-	-	1	1																																																																								2
TGT	-	-	13	2	2	3	1		1																																																																			22
TTA	-	-	153	57	15	5		1																																																																				231
TTC	-	-	10	8	5	3	1																																																																					27
TTG	-	-	23	10	5	3		1																																																																				42
AAAC	-	12	1	2													1																																																											16
AAAG	-	3	2																																																																									5
AAAT	-	91	27	3	3	1	1																																																																					126
AACA	-	9	1															1																																																										11
AACC	-	3	1										2		1		1																																																											8
AAGA	-	4	1	1																																																																								6
AAGC	-	2																																																																										2
AAGG	-		1																																																																									1
AAGT	-	6	2																																																																									8
AATA	-	132	33	9	3	2		1	1								1																																																											182
AATC	-	4	1																																																																									5
AATG	-	10	3	1					1					1																																																														16
AATT	-	25	2																																																																									27
ACAA	-	20	5	2		1				1																																																																		29
ACAG	-	33	17	5	3	2	2				1																																																																	63
ACAT	-	38	4	1	2	2					1																																																																	48
ACCA	-	2	1		1				1		1			1	1		1																																																											9
ACCG	-	1															1																																																											2
ACCT	-	9	1																																																																									10
ACGA	-	3	1																																																																									4
ACGC	-	2	1																																																																									3
ACGG	-	2																																																																										2
ACTA	-	2	1																																																																									3
ACTC	-	5	2					1				1																																																																9
ACTG	-	12	2	3	1		1	2		1	2	2	2	2			1																																																											31
ACTT	-	4		1																																																																								5
AGAA	-	4		1																																																																								5
AGAC	-	7	4	1				1									1																																																											14
AGAT	-	9	1																																																																									10
AGCA	-	1								1																																																																		2
AGCG	-	2																																																																										2
AGCT	-	1																																																																										1
AGGC	-	1																																																																										1
AGGT	-	18	4		1																																																																							23
AGTA	-	10	1																																																																									11
AGTC	-	7	5	2		2			1	1	1		1																																																															20
AGTG	-	2	2		1		1			1	1			1						1																																																								10
AGTT	-	7				1																																																																						8
ATAA	-	95	21	3	3	1	1																																																																					124
ATAC	-	36	10	1	3																																																																							50
ATAG	-	13			1	1																																																																						15
ATCA	-	4	1																																																																									5
ATCC	-	11	3	2					1							2																																																												19
ATCG	-	1	1																																																																									2
ATCT	-	5	1																																																																									6
ATGA	-	6	4			1																																																																						11
ATGC	-	2	1		1																																																																							4
ATGG	-	14	2	1	1				1				1		1			1																																																										22
ATGT	-	32	5	5	1			1																																																																				44
ATTA	-	28	4																																																																									32
ATTC	-	11	1	2	3		2							1																																																														20
ATTG	-	6																																																																										6
ATTT	-	81	14	4	3	2	2																																																																					106
CAAA	-	9	3	1	1		1																																																																					15
CAAG	-	1																																																																										1
CAAT	-	4																																																																										4
CACG	-	2	2	1																																																																								5
CACT	-	1						1								1																																																												3
CAGA	-	10	3	2					1			1																																																																17
CAGC	-		1																																																																									1
CAGG	-	1																																																																										1
CAGT	-	1	2		1		1		1	1							1																																																											8
CATA	-	13	11	5	2		2		1			1																																																																35
CATC	-	17	4	1				1				1																																																																24
CATG	-	1																																																																										1
CATT	-	2	1	1																																																																								4
CCAA	-							1									1																																																											2
CCAG	-		1																																																																									1
CCAT	-	7	2			1			1								1																																																											12
CCCG	-	2																																																																										2
CCCT	-		1																																																																									1
CCGA	-	1											2		2	1																																																												6
CCGC	-	3																																																																										3
CCGT	-		1		1																																																																							2
CCTA	-	12	4																																																																									16
CCTC	-	2																																																																										2
CGAA	-	2																																																																										2
CGAC	-								1																																																																			1
CGAT	-	1																																																																										1
CGCA	-	2																																																																										2
CGGA	-		2																																																																									2
CGGT	-		1					1	1							1																																																												4
CGTA	-	3																																																																										3
CGTC	-	1																																																																										1
CTAA	-	2	1																																																																									3
CTAC	-	26	5	1																																																																								32
CTAG	-	1	1																																																																									2
CTAT	-	7	3	1																																																																								11
CTCA	-		2	1		2			1		1		1		1																																																													9
CTCC	-	1																																																																										1
CTGA	-	10	2	1					1	2		1		2			1					1																																																						21
CTGC	-	1																																																																										1
CTGG	-	1								1																																																																		2
CTGT	-	5	1	2																																																																								8
CTTA	-	4	2																																																																									6
CTTC	-	1																																																																										1
CTTG	-	3									1	1		1			1																																																											7
CTTT	-	2		1																																																																								3
GAAA	-	5																																																																										5
GAAG	-			1																																																																								1
GAAT	-	7	1																																																																									8
GACA	-	6	1	3	2	1							1																																																															14
GACC	-						1					1	1																																																															3
GACG	-	6	1		1																																																																							8
GACT	-	1	5			1			1	1	1	1																																																																11
GAGT	-	2			1																																																																							3
GATA	-	3	1	1																																																																								5
GATC	-	1	1																																																																									2
GATG	-	24	2	1	1								1																																																															29
GATT	-	4																																																																										4
GCAA	-	1															1																																																											2
GCAC	-			1																																																																								1
GCAT	-	4			1																																																																							5
GCCA	-	1	2	2				1	1																																																																			7
GCCT	-	1																																																																										1
GCGT	-	2																																																																										2
GCTA	-	1																																																																										1
GCTT	-	2									1																																																																	3
GGAA	-	1																																																																										1
GGAC	-	4	1	2																																																																								7
GGAT	-	4			1																																																																							5
GGCT	-			1													2				1																																																							4
GGGA	-	1																																																																										1
GGTA	-	29	6	2																																																																								37
GGTC	-	1						1																																																																				2
GGTT	-	2		1		1			1	1	1					1																																																												8
GTAA	-	7																																																																										7
GTAC	-	4	1																																																																									5
GTAG	-	63	7	3																																																																								73
GTAT	-	29	4	2																																																																								35
GTCA	-	5	9	3	2				1		1					1	1																																																											23
GTCC	-	1																																																																										1
GTCG	-		2	1	1	1	1				1					1	2																																																											10
GTCT	-	5	2	1		1								1																																																														10
GTGA	-	1											1			1	1																																																											4
GTGC	-	1	1																																																																									2
GTTA	-	2	1																																																																									3
GTTC	-			1																																																																								1
GTTG	-	2	1		2	1	1						1		2		1																																																											11
GTTT	-	11	5								1																																																																	17
TAAA	-	150	31	10	5	2					1																																																																	199
TAAC	-	8																																																																										8
TAAG	-	7	1	1																																																																								9
TAAT	-	14	4																																																																									18
TACA	-	80	30	9	3	4	1	2		1				1																																																														131
TACC	-	83	11	1	1																																																																							96
TACG	-		1																																																																									1
TACT	-	21	2																																																																									23
TAGA	-	10	4	1	1	3																																																																						19
TAGC	-	3																																																																										3
TAGG	-	49	6																																																																									55
TAGT	-	3																																																																										3
TATC	-	13	4	1																																																																								18
TATG	-	61	23	12	1	1	1																																																																					99
TATT	-	123	22	7	2	1	2					1																																																																158
TCAA	-	3	1		1																																																																							5
TCAG	-	20	1	2	7				1	1					1																																																													33
TCAT	-	9	2	1						1																																																																		13
TCCA	-	15	3	1								1				1																																																												21
TCGG	-				1	3						2					1	1																																																										8
TCTA	-	10	1			1						1																																																																13
TCTG	-	21	8	1	3		1	1			2						1																																																											38
TCTT	-	4			3		1		1																																																																			9
TGAA	-	7	2	1																																																																								10
TGAC	-	11	4	1	1	2	2	1				1		1			1																																																											25
TGAG	-	2									1																																																																	3
TGAT	-	11	1																																																																									12
TGCA	-	4		1																																																																								5
TGCG	-	1																																																																										1
TGCT	-	1		1											1		1																																																											4
TGGA	-	8		2						1			1			2	1																																																											15
TGGC	-												1																																																															1
TGGT	-	1	1									1																																																																3
TGTA	-	60	20	10	6	6		1	2																																																																			105
TGTC	-	30	13	2	2	4	3			2		1		1	1			1																																																										60
TGTT	-	11	3		1																																																																							15
TTAA	-	26	2	2																																																																								30
TTAC	-	4	1		1																																																																							6
TTAT	-	143	32	11	3	1	1	1																																																																				192
TTCA	-	7	1	1				1																																																																				10
TTCT	-	6	1	1	1																																																																							9
TTGA	-	5		1																																																																								6
TTGC	-				1												1																																																											2
TTGG	-	2	1				2				1	3		1	1																																																													11
TTGT	-	14	5									1																																																																20
TTTA	-	147	27	6		2	1																																																																					183
TTTC	-	10	2	1			1				1																																																																	15
TTTG	-	27	4						1																																																																			32
AAAAC	20	1																																																																										21
AAAAG	10	1																																																																										11
AAAAT	80	5																																																																										85
AAACA	20	1																																																																										21
AAACC	3																																																																											3
AAACG	3	1																																																																										4
AAACT	10	2																																																																										12
AAAGA	10		1																																																																									11
AAAGC	3																																																																											3
AAAGT	6																																																																											6
AAATA	99	5		1																																																																								105
AAATC	18	3	1																																																																									22
AAATG	13	1																																																																										14
AAATT	52	1																																																																										53
AACAA	14																																																																											14
AACAC	6																																																																											6
AACAG	5	1																																																																										6
AACAT	2																																																																											2
AACCA	5																																																																											5
AACCT	3	2	1	2	2	3	3	2	1	2	3	1	4																																																															29
AACGA	5																																																																											5
AACGG	3																																																																											3
AACGT	6																																																																											6
AACTA	5	1																																																																										6
AACTC	1																																																																											1
AACTG	4	1																																																																										5
AACTT	1																																																																											1
AAGAA	7																																																																											7
AAGAC	3																																																																											3
AAGAG	1																																																																											1
AAGAT	6	2																																																																										8
AAGCA	1																																																																											1
AAGCT	3																																																																											3
AAGGA	1																																																																											1
AAGGC	1																																																																											1
AAGGT	7																																																																											7
AAGTA	4																																																																											4
AAGTC	2																																																																											2
AAGTG	5	1																																																																										6
AAGTT	4																																																																											4
AATAA	90	5		1																																																																								96
AATAC	11	1	1																																																																									13
AATAG	6																																																																											6
AATAT	34																																																																											34
AATCA	15	2		1																																																																								18
AATCC	1																																																																											1
AATCG	5																																																																											5
AATCT	4																																																																											4
AATGA	12	1	1				1																																																																					15
AATGC	2																																																																											2
AATGG	4																																																																											4
AATGT	13	1																																																																										14
AATTA	43	2																																																																										45
AATTC	23	2											1																																																															26
AATTG	13	1																																																																										14
AATTT	54	2																																																																										56
ACAAA	9	1																																																																										10
ACAAC	1																																																																											1
ACAAG	3																																																																											3
ACAAT	14	3																																																																										17
ACACA	6																																																																											6
ACACC	2																																																																											2
ACACG	1																																																																											1
ACACT	3	1																																																																										4
ACAGA	6																																																																											6
ACAGT	1	1																																																																										2
ACATA	6																																																																											6
ACATC	3	1																																																																										4
ACATG	3																																																																											3
ACATT	11																																																																											11
ACCAC	1																																																																											1
ACCAT	5																																																																											5
ACCCA	1																																																																											1
ACCCC	1																																																																											1
ACCGA	1																																																																											1
ACCGT	1																																																																											1
ACCTA	14	3	5	3			4	7	3	4	5	7	3																																																															58
ACCTT	2																																																																											2
ACGAA	4																																																																											4
ACGAC	4																																																																											4
ACGAT	1																																																																											1
ACGCA	1																																																																											1
ACGCT	1																																																																											1
ACGGA	1																																																																											1
ACGGT	1																																																																											1
ACGTA	2	1																																																																										3
ACGTC	4		1																																																																									5
ACGTG	2																																																																											2
ACGTT	3																																																																											3
ACTAA	8	1																																																																										9
ACTAC	4																																																																											4
ACTAG	4																																																																											4
ACTAT	5																																																																											5
ACTCA	3																																																																											3
ACTCC	3		1	1																																																																								5
ACTCT		1																																																																										1
ACTGA	4																																																																											4
ACTGC	2																																																																											2
ACTGG	1																																																																											1
ACTGT	5																																																																											5
ACTTA	4																																																																											4
ACTTC	4																																																																											4
ACTTG	1																																																																											1
ACTTT	8																																																																											8
AGAAA	5	1																																																																										6
AGAAC	1																																																																											1
AGAAG	8																																																																											8
AGAAT	4	3																																																																										7
AGACA	1																																																																											1
AGACC	1																																																																											1
AGACT	5																																																																											5
AGAGA	5																																																																											5
AGAGT	2																																																																											2
AGATA	3		1																																																																									4
AGATC	1																																																																											1
AGATG	1																																																																											1
AGATT	5																																																																											5
AGCAC	2																																																																											2
AGCAG	1																																																																											1
AGCAT	1																																																																											1
AGCCA	2	1																																																																										3
AGCCC	2																																																																											2
AGCCT	2																																																																											2
AGCTC	2																																																																											2
AGCTT	3	1																																																																										4
AGGAA	1																																																																											1
AGGAG	2																																																																											2
AGGAT	1																																																																											1
AGGCA	1																																																																											1
AGGCT	1																																																																											1
AGGGG	1																																																																											1
AGGGT	1																																																																											1
AGGTA	10																																																																											10
AGGTT	8	1	2	1		1	3	2			1	7	2																																																															28
AGTAA	2																																																																											2
AGTAC	2	1																																																																										3
AGTAG	6	1																																																																										7
AGTAT	4																																																																											4
AGTCA	1																																																																											1
AGTCC	3																																																																											3
AGTCG	1																																																																											1
AGTCT	6																																																																											6
AGTGA	2																																																																											2
AGTGC	2																																																																											2
AGTGG	1			1				1																																																																				3
AGTGT	7																																																																											7
AGTTA	1																																																																											1
AGTTC	2																																																																											2
AGTTG	4																																																																											4
AGTTT	6	1																																																																										7
ATAAA	62	3																																																																										65
ATAAC	4																																																																											4
ATAAG	6		1																																																																									7
ATAAT	43	2																																																																										45
ATACA	17	2				1																																																																						20
ATACC	4	1																																																																										5
ATACG	4																																																																											4
ATACT	2																																																																											2
ATAGA	9	1				1																																																																						11
ATAGC	5																																																																											5
ATAGG	3																																																																											3
ATAGT	3																																																																											3
ATATA	40																																																																											40
ATATC	2																																																																											2
ATATG	5																																																																											5
ATATT	36	3	1																																																																									40
ATCAA	15	1	1																																																																									17
ATCAC	6																																																																											6
ATCAG	3	1																																																																										4
ATCAT	2																																																																											2
ATCCA	3																																																																											3
ATCCC	1																																																																											1
ATCCT	1																																																																											1
ATCGA	2																																																																											2
ATCGC	1																																																																											1
ATCGT	3																																																																											3
ATCTA	8																																																																											8
ATCTC	2																																																																											2
ATCTG	2																																																																											2
ATCTT	7																																																																											7
ATGAA	9																																																																											9
ATGAC	12																																																																											12
ATGAG		1																																																																										1
ATGAT	4																																																																											4
ATGCA	8																																																																											8
ATGCT	3																																																																											3
ATGGA	3																																																																											3
ATGGC	2																																																																											2
ATGGG	1		1																																																																									2
ATGGT	1	2																																																																										3
ATGTA	19																																																																											19
ATGTC	4																																																																											4
ATGTG	6																																																																											6
ATGTT	10																																																																											10
ATTAA	36	3																																																																										39
ATTAC	13																																																																											13
ATTAG	7		1																																																																									8
ATTAT	29	3																																																																										32
ATTCA	15	1	1																																																																									17
ATTCC	1																																																																											1
ATTCG	4																																																																											4
ATTCT	6	1										1																																																																8
ATTGA	8																																																																											8
ATTGC	3																																																																											3
ATTGG	4																																																																											4
ATTGT	9	2																																																																										11
ATTTA	38	5																																																																										43
ATTTC	23	1																																																																										24
ATTTG	14		2																																																																									16
ATTTT	93	5																																																																										98
CAAAA	14	2																																																																										16
CAAAC	1																																																																											1
CAAAG	1																																																																											1
CAAAT	12	2																																																																										14
CAACA	3																																																																											3
CAACT	2																																																																											2
CAAGC	1																																																																											1
CAAGG	2																																																																											2
CAAGT	2																																																																											2
CAATA	11	1																																																																										12
CAATC	1																																																																											1
CAATG	3																																																																											3
CAATT	4																																																																											4
CACAA	6	1																																																																										7
CACAC	1																																																																											1
CACAG		1																																																																										1
CACAT	1	1																																																																										2
CACCA	2	2																																																																										4
CACCG	1																																																																											1
CACCT	2																																																																											2
CACGA	3		1																																																																									4
CACTA	3	1			1																																																																							5
CACTC							1																																																																					1
CACTG	1		1																																																																									2
CACTT	3	1																																																																										4
CAGAA	2																																																																											2
CAGAC	1																																																																											1
CAGGA	1																																																																											1
CAGGC	2																																																																											2
CAGTC	1																																																																											1
CAGTG	1																																																																											1
CAGTT	1																																																																											1
CATAA	4																																																																											4
CATAC	1																																																																											1
CATAG	1																																																																											1
CATAT	1																																																																											1
CATCA	3																																																																											3
CATCC	3																																																																											3
CATCT	2																																																																											2
CATGA	2																																																																											2
CATGC	1																																																																											1
CATGT	2																																																																											2
CATTA	4	1																																																																										5
CATTC	2	1																																																																										3
CATTG	6																																																																											6
CATTT	13																																																																											13
CCAAA	1																																																																											1
CCAAT	2																																																																											2
CCACA	2																																																																											2
CCACC	2																																																																											2
CCACG	1																																																																											1
CCACT	3		2																																																																									5
CCAGA	2																																																																											2
CCAGT	1																																																																											1
CCCAA	1																																																																											1
CCCAT	1																																																																											1
CCCCT	1	1																																																																										2
CCCGC		1																																																																										1
CCCGT	1																																																																											1
CCCTA	1																																																																											1
CCGAC	1																																																																											1
CCGAG	1			1																																																																								2
CCGCA	2																																																																											2
CCGCG	6																																																																											6
CCGTA	1																																																																											1
CCGTC	1																																																																											1
CCGTT	1																																																																											1
CCTAA	10	1		4		2	5	3	3	3	5	3	6																																																															45
CCTAC	2																																																																											2
CCTAT	2																																																																											2
CCTCC	3																																																																											3
CCTCG	3																																																																											3
CCTGG	1																																																																											1
CCTGT	2																																																																											2
CCTTA	1																																																																											1
CCTTC		1																																																																										1
CGAAA	2	1																																																																										3
CGAAT	1																																																																											1
CGACA	2																																																																											2
CGACG	7																																																																											7
CGAGA	1																																																																											1
CGAGG	2																																																																											2
CGATA	1	1																																																																										2
CGATT	2	1																																																																										3
CGCAA	2																																																																											2
CGCAC	2	1			1																																																																							4
CGCAT	1																																																																											1
CGCCG	12	2	1																																																																									15
CGCGA	2																																																																											2
CGCGC	2																																																																											2
CGCTA	2																																																																											2
CGGAG	1																																																																											1
CGGCG	5																																																																											5
CGGTA	1																																																																											1
CGGTG	1	1																																																																										2
CGTAA	1																																																																											1
CGTAC	1																																																																											1
CGTAG	1																																																																											1
CGTAT	3	1																																																																										4
CGTCA	3	2																																																																										5
CGTCC	1																																																																											1
CGTCG	4																																																																											4
CGTGA	2																																																																											2
CGTGG	2																																																																											2
CGTGT	5	1																																																																										6
CGTTA	2																																																																											2
CGTTG	1																																																																											1
CGTTT	1																																																																											1
CTAAA	9	1																																																																										10
CTAAC	14	3		1			3	2	3			3	5																																																															34
CTAAG	2	1																																																																										3
CTAAT	1	1																																																																										2
CTACA	2			1																																																																								3
CTACG	1																																																																											1
CTACT	1																																																																											1
CTAGG	1																																																																											1
CTAGT	7																																																																											7
CTATA	5																																																																											5
CTATC	5																																																																											5
CTATG	1																																																																											1
CTATT	1																																																																											1
CTCAA	2																																																																											2
CTCCA	3	1					2	2			1	1																																																																10
CTCGA		1																																																																										1
CTCGC	2		1	1																																																																								4
CTCGG	1																																																																											1
CTCGT	1																																																																											1
CTCTA	1	1																																																																										2
CTCTC	1																																																																											1
CTCTG	1																																																																											1
CTCTT	1							1																																																																				2
CTGAA	5																																																																											5
CTGAC	1																																																																											1
CTGAG	2																																																																											2
CTGAT	1																																																																											1
CTGCA	1																																																																											1
CTGCT	1	1																																																																										2
CTGGA	1																																																																											1
CTGTA	6	1																																																																										7
CTGTC	2																																																																											2
CTGTG	2																																																																											2
CTGTT	1																																																																											1
CTTAA	1																																																																											1
CTTAC	5																																																																											5
CTTAT	6																																																																											6
CTTCA	4																																																																											4
CTTCC	1																																																																											1
CTTCG	4																																																																											4
CTTGA	3																																																																											3
CTTGT	2																																																																											2
CTTTA	4																																																																											4
CTTTC	1																																																																											1
CTTTG	3																																																																											3
CTTTT	15																																																																											15
GAAAA	10																																																																											10
GAAAC	5																																																																											5
GAAAG	2																																																																											2
GAAAT	8	1																																																																										9
GAACA	1																																																																											1
GAAGG	1	1																																																																										2
GAAGT	1																																																																											1
GAATA	6																																																																											6
GAATC	1																																																																											1
GAATG	3																																																																											3
GAATT	8	2																																																																										10
GACAA	4																																																																											4
GACAC	3	1																																																																										4
GACAT	4																																																																											4
GACCA	1																																																																											1
GACGA	2																																																																											2
GACGC		1																																																																										1
GACGT	4																																																																											4
GACTA	1	1																																																																										2
GACTG	1																																																																											1
GACTT	2																																																																											2
GAGAA	1																																																																											1
GAGAC	2																																																																											2
GAGAT	2																																																																											2
GAGGA	1																																																																											1
GAGTA	1									1																																																																		2
GAGTG		1			1																																																																							2
GAGTT	1																																																																											1
GATAA	5																																																																											5
GATAC	4																																																																											4
GATAG	5																																																																											5
GATCG	1																																																																											1
GATGA	3																																																																											3
GATGC	1																																																																											1
GATGG	1																																																																											1
GATGT	2																																																																											2
GATTA	5																																																																											5
GATTC	4																																																																											4
GATTT	12																																																																											12
GCAAC	1																																																																											1
GCAAT	1																																																																											1
GCACA	1																																																																											1
GCACT	1																																																																											1
GCAGC	1																																																																											1
GCAGT	1																																																																											1
GCATA	1																																																																											1
GCATC	2																																																																											2
GCCAA	1																																																																											1
GCCAG		1																																																																										1
GCCCC	1																																																																											1
GCCGC	1																																																																											1
GCCTC	1	1																																																																										2
GCCTT									1																																																																			1
GCGAC	2																																																																											2
GCGAG	1																																																																											1
GCGCA	1																																																																											1
GCGCC	7																																																																											7
GCGCG	5	1																																																																										6
GCGGC	8	2																																																																										10
GCGGG	1																																																																											1
GCGGT	3																																																																											3
GCGTA	1																																																																											1
GCGTC	3																																																																											3
GCTAC	1																																																																											1
GCTAT	2																																																																											2
GCTCT	1																																																																											1
GCTTA	1																																																																											1
GCTTG	1																																																																											1
GGAAC	2																																																																											2
GGAAG	1																																																																											1
GGAAT	1																																																																											1
GGACA	2																																																																											2
GGAGA	1																																																																											1
GGAGG	1	1																																																																										2
GGAGT	3	2	1			1	1		1	1																																																																		10
GGATG	1																																																																											1
GGATT	1																																																																											1
GGCGC	2																																																																											2
GGGCG	2																																																																											2
GGGGA	2																																																																											2
GGGGC	1																																																																											1
GGTAA	1																																																																											1
GGTAC	2																																																																											2
GGTAG	1																																																																											1
GGTAT	3																																																																											3
GGTGC	3																																																																											3
GGTTA	19	1	3	2	5	3	2	6	8	11	7	9	8																																																															84
GGTTT	2																																																																											2
GTAAA	6	1																																																																										7
GTAAC	3	1																																																																										4
GTAAG	3		1																																																																									4
GTAAT	5	1																																																																										6
GTACA	4																																																																											4
GTACC	1																																																																											1
GTACT	1																																																																											1
GTAGA	1																																																																											1
GTAGC	2																																																																											2
GTAGG	2																																																																											2
GTAGT	7																																																																											7
GTATA	6	2																																																																										8
GTATC	3																																																																											3
GTATG	4	1																																																																										5
GTATT	11	1																																																																										12
GTCAA	3	1																																																																										4
GTCAC	3																																																																											3
GTCAT	5																																																																											5
GTCCC	1																																																																											1
GTCGC	1	1																																																																										2
GTCGT	2																																																																											2
GTCTA	4																																																																											4
GTGAA	6																																																																											6
GTGAC	5			1																																																																								6
GTGAG	2																																																																											2
GTGAT	2																																																																											2
GTGCA	1																																																																											1
GTGCC	1																																																																											1
GTGCT	2																																																																											2
GTGGA					1																																																																							1
GTGGC	1																																																																											1
GTGGT	2	1																																																																										3
GTGTA	1	1																																																																										2
GTGTC	7																																																																											7
GTGTG	2																																																																											2
GTGTT	2	1																																																																										3
GTTAA	1																																																																											1
GTTAC	4	1																																																																										5
GTTAG	26	5	1	3	1	4	1	2	5	5	4	4	3																																																															64
GTTAT	3																																																																											3
GTTCA	3																																																																											3
GTTCC	1																																																																											1
GTTCG	3																																																																											3
GTTCT	4																																																																											4
GTTGA	3																																																																											3
GTTGT	9	1																																																																										10
GTTTA	9		1																																																																									10
GTTTC	1	1																																																																										2
GTTTG	2																																																																											2
GTTTT	18	1																																																																										19
TAAAA	90	5																																																																										95
TAAAC	5																																																																											5
TAAAG	4	1																																																																										5
TAAAT	35	4																																																																										39
TAACA	5																																																																											5
TAACC	8	1		2	1	1	2	2			1	1	2																																																															21
TAACG	5	1																																																																										6
TAACT	1																																																																											1
TAAGA	4																																																																											4
TAAGC	1																																																																											1
TAAGG	6																																																																											6
TAAGT	1																																																																											1
TAATA	26	2																																																																										28
TAATC	10	1																																																																										11
TAATG	9																																																																											9
TAATT	34																																																																											34
TACAA	18	3	1																																																																									22
TACAC	6																																																																											6
TACAG	5																																																																											5
TACAT	9																																																																											9
TACCA	3																																																																											3
TACCG	1																																																																											1
TACCT	6																																																																											6
TACGA	5																																																																											5
TACGC	3																																																																											3
TACGT	4																																																																											4
TACTA	9	1																																																																										10
TACTC	2																																																																											2
TACTG	4																																																																											4
TACTT	9																																																																											9
TAGAA	6																																																																											6
TAGAC	2																																																																											2
TAGAG	5																																																																											5
TAGAT	9																																																																											9
TAGCA	1																																																																											1
TAGCT	3																																																																											3
TAGGA	4																																																																											4
TAGGG	2																																																																											2
TAGGT	13	6	2	1	1	2	1	1	1	2	1	4	7																																																															42
TAGTA	2																																																																											2
TAGTC	3	1																																																																										4
TAGTG	6																																																																											6
TAGTT	2																																																																											2
TATAA	19	1																																																																										20
TATAC	4																																																																											4
TATAG	11																																																																											11
TATAT	33	3	1																																																																									37
TATCA	2	1				1																																																																						4
TATCC	1																																																																											1
TATCG	6	1																																																																										7
TATCT	3	1	1																																																																									5
TATGA	4																																																																											4
TATGC	1																																																																											1
TATGG	1																																																																											1
TATGT	5																																																																											5
TATTA	43																																																																											43
TATTC	10	1																																																																										11
TATTG	14	1																																																																										15
TATTT	68																																																																											68
TCAAA	19	3	1																																																																									23
TCAAC	2	1																																																																										3
TCAAG	5																																																																											5
TCAAT	1	1		1																																																																								3
TCACA	9																																																																											9
TCACC	2																																																																											2
TCACG	4																																																																											4
TCACT	4																																																																											4
TCAGA	1																																																																											1
TCAGG	1																																																																											1
TCAGT	3																																																																											3
TCATA	3																																																																											3
TCATC	3																																																																											3
TCATG	1																																																																											1
TCATT	11		1																																																																									12
TCCAA	3																																																																											3
TCCAC	1				1							1																																																																3
TCCAG	3																																																																											3
TCCAT	4																																																																											4
TCCCA	1																																																																											1
TCCCG	1																																																																											1
TCCCT	1																																																																											1
TCCGG	1																																																																											1
TCCGT	1	1																																																																										2
TCCTA	1	1																																																																										2
TCCTT		1																																																																										1
TCGAA	3																																																																											3
TCGAT	1																																																																											1
TCGCA	2																																																																											2
TCGCG	2																																																																											2
TCGCT	2																																																																											2
TCGGA	2																																																																											2
TCGGG	1																																																																											1
TCGTA	10																																																																											10
TCGTC	1																																																																											1
TCGTG	1																																																																											1
TCTAA	5																																																																											5
TCTAG	7		1																																																																									8
TCTAT	10																																																																											10
TCTCA	5	3																																																																										8
TCTCC	1																																																																											1
TCTCT	5																																																																											5
TCTGA	3																																																																											3
TCTGT	4																																																																											4
TCTTA	3																																																																											3
TCTTC	3																																																																											3
TCTTG	3																																																																											3
TCTTT	13																																																																											13
TGAAA	18	4	1																																																																									23
TGAAC	2																																																																											2
TGAAG	5	1																																																																										6
TGAAT	8																																																																											8
TGACA	6																																																																											6
TGACG	2	1																																																																										3
TGACT	6																																																																											6
TGAGA	2																																																																											2
TGAGC	1																																																																											1
TGAGT	2																																																																											2
TGATA	1																																																																											1
TGATG	5	1																																																																										6
TGATT	15	3																																																																										18
TGCAA	3																																																																											3
TGCAG	2																																																																											2
TGCAT	1																																																																											1
TGCGA	2																																																																											2
TGCGG	1																																																																											1
TGCGT	1																																																																											1
TGCTA	3																																																																											3
TGCTC	1																																																																											1
TGCTG	3																																																																											3
TGGAA	4																																																																											4
TGGAC	1																																																																											1
TGGAG										1				1																																																														2
TGGAT	4																																																																											4
TGGCG	1																																																																											1
TGGCT	1																																																																											1
TGGGA	3																																																																											3
TGGGG			1																																																																									1
TGGTA	4																																																																											4
TGGTC	1																																																																											1
TGGTG	2	1																																																																										3
TGGTT	2																																																																											2
TGTAA	16																																																																											16
TGTAC	9																																																																											9
TGTAG	8																																																																											8
TGTAT	16	4																																																																										20
TGTCA	12																																																																											12
TGTCG	6																																																																											6
TGTGA	7	1																																																																										8
TGTGG	2																																																																											2
TGTGT	8																																																																											8
TGTTA	7																																																																											7
TGTTC	2	1																																																																										3
TGTTG	5	1																																																																										6
TGTTT	16	1																																																																										17
TTAAA	30	3																																																																										33
TTAAC	2																																																																											2
TTAAG	2																																																																											2
TTAAT	47																																																																											47
TTACA	18	3																																																																										21
TTACC	4																																																																											4
TTACG	10																																																																											10
TTACT	4																																																																											4
TTAGA	5																																																																											5
TTAGC	1	1																																																																										2
TTAGG	18	3	1		1		2	1		6	2	6	9																																																															49
TTAGT	5																																																																											5
TTATA	21	2																																																																										23
TTATC	6	1	1		1		1																																																																					10
TTATG	7	1	1																																																																									9
TTATT	80	4																																																																										84
TTCAA	13	1																																																																										14
TTCAC	2																																																																											2
TTCAG	5	2																																																																										7
TTCAT	10	1																																																																										11
TTCCA	10	1																																																																										11
TTCCC	1																																																																											1
TTCCG	2																																																																											2
TTCGA	5																																																																											5
TTCGC	1																																																																											1
TTCGG	1																																																																											1
TTCGT	1																																																																											1
TTCTA	8	1			1																																																																							10
TTCTC	1																																																																											1
TTCTG	4																																																																											4
TTCTT	13																																																																											13
TTGAA	18	2																																																																										20
TTGAC	2																																																																											2
TTGAG	1																																																																											1
TTGAT	14	5																																																																										19
TTGCA	1																																																																											1
TTGCC														1																																																														1
TTGCG	3																																																																											3
TTGCT	1																																																																											1
TTGGA	4																																																																											4
TTGGC	1																																																																											1
TTGGG	1																																																																											1
TTGGT	1																																																																											1
TTGTA	35	1					1																																																																					37
TTGTC	2																																																																											2
TTGTG	13																																																																											13
TTGTT	22																																																																											22
TTTAA	46	3	1																																																																									50
TTTAC	11																																																																											11
TTTAG	14	2																																																																										16
TTTAT	85	7	1																																																																									93
TTTCA	23	1									1	1																																																																26
TTTCC	1																																																																											1
TTTCG	7																																																																											7
TTTCT	9		1																																																																									10
TTTGA	35	12	3																																																																									50
TTTGC	3																																																																											3
TTTGG	5																																																																											5
TTTGT	22																																																																											22
TTTTA	153	5	1	1																																																																								160
TTTTC	12																																																																											12
TTTTG	56	2																																																																										58
AAAAAG	1																																																																											1
AAAAAT	9																																																																											9
AAAACT	1																																																																											1
AAAAGA	2																																																																											2
AAAATA	6	1																																																																										7
AAAATC	11	3	3																																																																									17
AAAATT	3																																																																											3
AAACAA	1																																																																											1
AAACCG	1																																																																											1
AAACGT	1																																																																											1
AAACTC	4																																																																											4
AAAGAA	1																																																																											1
AAAGAG		1																																																																										1
AAAGTA	1						1																																																																					2
AAAGTC	3																																																																											3
AAATAA	5	1																																																																										6
AAATAG	1																																																																											1
AAATAT	1																																																																											1
AAATCA	3	1																																																																										4
AAATCT	1																																																																											1
AAATGT	1																																																																											1
AAATTA	3																																																																											3
AAATTC	5	1																																																																										6
AACACC	1																																																																											1
AACCGA	1																																																																											1
AACCGT	1																																																																											1
AACGTA	1																																																																											1
AACTCA	1																																																																											1
AACTCT	1																																																																											1
AACTGA	1																																																																											1
AACTGC	1																																																																											1
AACTGT	1																																																																											1
AACTTC	1																																																																											1
AAGAAA	4																																																																											4
AAGAAC		1																																																																										1
AAGATG	1																																																																											1
AAGCAT	1																																																																											1
AAGGAG		1																																																																										1
AAGGGC		1																																																																										1
AAGTCA	1																																																																											1
AAGTGG	1																																																																											1
AAGTTT	1																																																																											1
AATAAA	3																																																																											3
AATAAC	2																																																																											2
AATAAG	1																																																																											1
AATACA	2																																																																											2
AATAGT	1																																																																											1
AATATA	1																																																																											1
AATCAA	3	1																																																																										4
AATGAC	2																																																																											2
AATGTA	1																																																																											1
AATGTT	1																																																																											1
AATTAA	1																																																																											1
AATTAT	1																																																																											1
AATTCA	3																																																																											3
AATTCC	1																																																																											1
AATTGA	1																																																																											1
AATTTC	2																																																																											2
AATTTG	5																																																																											5
AATTTT	3																																																																											3
ACAACT	1																																																																											1
ACAAGT		1																																																																										1
ACAATT	1																																																																											1
ACACCA	1																																																																											1
ACACCG	2																																																																											2
ACAGTG	1																																																																											1
ACATAC	1																																																																											1
ACATAG	1																																																																											1
ACATAT	1																																																																											1
ACATCG	1																																																																											1
ACATCT	1																																																																											1
ACATGA	2																																																																											2
ACATGG	1																																																																											1
ACATGT	1																																																																											1
ACATTA	1																																																																											1
ACATTG	1																																																																											1
ACATTT	1																																																																											1
ACCAAA	1																																																																											1
ACCAGC		1																																																																										1
ACCAGT	1																																																																											1
ACCGAA	1																																																																											1
ACCGAT	1																																																																											1
ACCGCC	1																																																																											1
ACCTAC	1																																																																											1
ACCTTA	1																																																																											1
ACGACT	1																																																																											1
ACGATT	1																																																																											1
ACGCAC		1																																																																										1
ACGCCC	1																																																																											1
ACGTAT	1																																																																											1
ACGTGT		1																																																																										1
ACGTTG	1																																																																											1
ACTAAA	2																																																																											2
ACTACG	1																																																																											1
ACTATA	1																																																																											1
ACTCAA	1																																																																											1
ACTCCT	1																																																																											1
ACTCTA	1																																																																											1
ACTCTT	1																																																																											1
ACTGAA	1																																																																											1
ACTGAC	2																																																																											2
ACTGTC	1																																																																											1
ACTTTG	6	3	1	1																																																																								11
ACTTTT	6		1	1																																																																								8
AGAAAG	3																																																																											3
AGAACC		1																																																																										1
AGAAGC	1																																																																											1
AGAAGT	2																																																																											2
AGACAC	1																																																																											1
AGACAG	3																																																																											3
AGACCA	1																																																																											1
AGACCT	1																																																																											1
AGAGGC	1																																																																											1
AGAGGG	1																																																																											1
AGATAA		1																																																																										1
AGATAT	1																																																																											1
AGCCGC	2																																																																											2
AGCGGA	1																																																																											1
AGCTAC	1																																																																											1
AGCTGT	1																																																																											1
AGGAAG	1	1																																																																										2
AGGCAA	1																																																																											1
AGGTCG		1																																																																										1
AGGTTA	1																																																																											1
AGTAAA										1																																																																		1
AGTCAA	3																																																																											3
AGTGAG	1																																																																											1
AGTGTG								1																																																																				1
AGTTCT	1																																																																											1
AGTTGA		1																																																																										1
AGTTTC	1	1																																																																										2
ATAAAA	3	1																																																																										4
ATAAAC	2																																																																											2
ATAAAG	2																																																																											2
ATAAAT	1	1																																																																										2
ATAACA	1																																																																											1
ATAACC	1																																																																											1
ATAAGT	1																																																																											1
ATAATT	2																																																																											2
ATACAA	2																																																																											2
ATACAC	1																																																																											1
ATACAT	1																																																																											1
ATACTA		1																																																																										1
ATAGAG	1																																																																											1
ATAGAT	1																																																																											1
ATAGGT	2																																																																											2
ATAGTA	1																																																																											1
ATAGTG	3																																																																											3
ATATAA	2																																																																											2
ATATAG		1																																																																										1
ATATCC	1																																																																											1
ATATGA	3																																																																											3
ATATGC	1																																																																											1
ATATGT	1																																																																											1
ATATTA	3																																																																											3
ATATTT	1																																																																											1
ATCAAA	6	2	2																																																																									10
ATCAAT	1																																																																											1
ATCACT	1																																																																											1
ATCAGG	1																																																																											1
ATCATA	1																																																																											1
ATCCAC	1																																																																											1
ATCCAG	2																																																																											2
ATCGTC	1																																																																											1
ATCTAA	1																																																																											1
ATCTAC	1																																																																											1
ATCTAT	3																																																																											3
ATCTCA	1																																																																											1
ATCTTA	1																																																																											1
ATCTTC	2																																																																											2
ATGAAA	3																																																																											3
ATGAAC	2																																																																											2
ATGAAG	1																																																																											1
ATGAAT	2																																																																											2
ATGACA	2																																																																											2
ATGATC	1																																																																											1
ATGCAT	1																																																																											1
ATGCTT	1																																																																											1
ATGGAT	1																																																																											1
ATGGGT	1																																																																											1
ATGTCA	3																																																																											3
ATGTGT	1																																																																											1
ATTAAA	1																																																																											1
ATTAAC	1																																																																											1
ATTAAT	2																																																																											2
ATTAGT	1																																																																											1
ATTATA	4																																																																											4
ATTATG	2																																																																											2
ATTCAA	1	2																																																																										3
ATTCAT	1																																																																											1
ATTCGC		1																																																																										1
ATTCTT	1																																																																											1
ATTGAA	1																																																																											1
ATTGCT	1																																																																											1
ATTGTA	2																																																																											2
ATTTAA	2																																																																											2
ATTTAC	1																																																																											1
ATTTAG	1																																																																											1
ATTTAT	1																																																																											1
ATTTCA	2																																																																											2
ATTTCT	1																																																																											1
ATTTGA	1							1																																																																				2
ATTTGT	7	1																																																																										8
ATTTTA	2																																																																											2
ATTTTC	5					1																																																																						6
ATTTTG	15	1	1																																																																									17
ATTTTT	6																																																																											6
CAAAAT	2																																																																											2
CAAACT	3	1																																																																										4
CAAAGT	1																																																																											1
CAAATA	1																																																																											1
CAAATT	3																																																																											3
CAACGG	1																																																																											1
CAAGAC	1																																																																											1
CAAGCG	1																																																																											1
CAATAT	1																																																																											1
CAATGT	1																																																																											1
CAATTA	1																																																																											1
CAATTT	1																																																																											1
CACACG	1																																																																											1
CACATC		1																																																																										1
CACCGA	1	1																																																																										2
CACGCA	1		1																																																																									2
CACGTG	1																																																																											1
CACTAC	1																																																																											1
CACTAT	2																																																																											2
CAGAAA	1																																																																											1
CAGAAT			1																																																																									1
CAGAGG	1																																																																											1
CAGTAG	2																																																																											2
CAGTGA	1																																																																											1
CATAAT	1																																																																											1
CATACA	1																																																																											1
CATAGC	1																																																																											1
CATAGG	1																																																																											1
CATCGA	1																																																																											1
CATGAC	1																																																																											1
CATGAT	1																																																																											1
CATGCA	1																																																																											1
CATGTT	1																																																																											1
CATTAT	1																																																																											1
CATTTC	1																																																																											1
CATTTG	1																																																																											1
CATTTT	2																																																																											2
CCAACA		1																																																																										1
CCAAGG	1																																																																											1
CCAATA	1																																																																											1
CCACAT	1																																																																											1
CCAGAA	2																																																																											2
CCATAC	1																																																																											1
CCATCA	1																																																																											1
CCCAAG	1																																																																											1
CCCACG	1																																																																											1
CCCGCA	1																																																																											1
CCCGCC	1																																																																											1
CCCGCG	1																																																																											1
CCCGCT	1																																																																											1
CCGAAG	2																																																																											2
CCGATG	1																																																																											1
CCGCAG	1																																																																											1
CCGCCT	2																																																																											2
CCGCTC	2																																																																											2
CCGGAG	1																																																																											1
CCGGGA	1																																																																											1
CCGTGA	1																																																																											1
CCTACA	1																																																																											1
CCTACC	1																																																																											1
CCTATA	1																																																																											1
CCTCCG	1		1																																																																									2
CCTCGA	1																																																																											1
CCTGCG	1																																																																											1
CCTTGC		1																																																																										1
CGACAC	1																																																																											1
CGACAT	1																																																																											1
CGAGTA	1																																																																											1
CGCACG	2																																																																											2
CGCACT		1																																																																										1
CGCCAC	1																																																																											1
CGCCCA	1																																																																											1
CGCCCG	1																																																																											1
CGCCGA	1																																																																											1
CGCCTC	1																																																																											1
CGCCTG	1																																																																											1
CGCGCC	2																																																																											2
CGCGCT	1																																																																											1
CGCTAT	1																																																																											1
CGCTTC	1																																																																											1
CGCTTG	1																																																																											1
CGGCGC	1																																																																											1
CGGGCG	1																																																																											1
CGTAAG	1																																																																											1
CGTCCC	1																																																																											1
CGTCTA	1																																																																											1
CGTGTG	2																																																																											2
CGTTAT	1																																																																											1
CGTTGA	1																																																																											1
CGTTTG	1																																																																											1
CTAAAA	2																																																																											2
CTAATA	1																																																																											1
CTAGAA	1																																																																											1
CTAGAG	1																																																																											1
CTAGAT	1																																																																											1
CTAGGT	1																																																																											1
CTAGTG	1																																																																											1
CTATAC	1																																																																											1
CTATTA	1																																																																											1
CTCAAA	1	1																																																																										2
CTCAAT			2																																																																									2
CTCCCC	1																																																																											1
CTCCGC	1																																																																											1
CTCGCA	1																																																																											1
CTCTAC	1																																																																											1
CTGACA	1																																																																											1
CTGCAA	1																																																																											1
CTGCTA	1																																																																											1
CTGGTT	1																																																																											1
CTGTAG	2																																																																											2
CTGTCA	1																																																																											1
CTGTGT	1																																																																											1
CTTCAA	1																																																																											1
CTTCCT	2																																																																											2
CTTGAA	1																																																																											1
CTTTAA	1																																																																											1
CTTTAT		1																																																																										1
CTTTGA	2	2	1		1					1																																																																		7
CTTTTA	1																																																																											1
CTTTTC	1																																																																											1
CTTTTT	2																																																																											2
GAAAAG	1																																																																											1
GAAAAT	2																																																																											2
GAAACC	1																																																																											1
GAAATT	1																																																																											1
GAACTT	2																																																																											2
GAAGAG	3																																																																											3
GAAGAT	1																																																																											1
GAAGCG	1																																																																											1
GAATAT	1																																																																											1
GAATCT	1																																																																											1
GAATGA	1																																																																											1
GAATTA	2																																																																											2
GAATTT	1																																																																											1
GACTAG	1																																																																											1
GACTTT			1																																																																									1
GAGAAG	1																																																																											1
GAGATC	1																																																																											1
GAGCGG	1																																																																											1
GAGGGC	1																																																																											1
GAGGGG	1																																																																											1
GAGGTA	1																																																																											1
GAGTGC	1																																																																											1
GATACC	1																																																																											1
GATAGA	1																																																																											1
GATATA	1																																																																											1
GATGAA	1																																																																											1
GATTAT	2																																																																											2
GATTTT	11	3	1																																																																									15
GCACAC	2																																																																											2
GCACTC	1																																																																											1
GCAGCG	1																																																																											1
GCCATA	1																																																																											1
GCCATC	1																																																																											1
GCCGCA	1																																																																											1
GCCGTC	1																																																																											1
GCGAAT	2	3																																																																										5
GCGACA	1																																																																											1
GCGACC	1																																																																											1
GCGAGT	1																																																																											1
GCGGAG	1																																																																											1
GCGGAT	1																																																																											1
GCGGCT	1																																																																											1
GCGGGC	1																																																																											1
GCGGTG	1																																																																											1
GCGTGG	1																																																																											1
GCTATA		1																																																																										1
GCTCTA	1																																																																											1
GCTGTC	1																																																																											1
GCTTGC	1																																																																											1
GGAAAA		2																																																																										2
GGAAAT	1																																																																											1
GGAGCC	1																																																																											1
GGAGGG	1																																																																											1
GGCGCG	2																																																																											2
GGCGGA	1	1																																																																										2
GGGAGG	1																																																																											1
GGGCGA	1																																																																											1
GGTGCA	2																																																																											2
GGTGTG		1																																																																										1
GGTTCA	1																																																																											1
GGTTGA	1																																																																											1
GTAAAA	1																																																																											1
GTACGA	1																																																																											1
GTAGTG	1																																																																											1
GTATCA	1																																																																											1
GTATTA	1																																																																											1
GTATTC	1																																																																											1
GTCAAA	3																																																																											3
GTCAAC	1																																																																											1
GTCATA	1																																																																											1
GTCATC	2																																																																											2
GTCGGC	1																																																																											1
GTCTTG	1	1																																																																										2
GTGACG	1																																																																											1
GTGCGA	1																																																																											1
GTGCGT	1																																																																											1
GTGCTG	1																																																																											1
GTGGAT	1																																																																											1
GTGGTA	1																																																																											1
GTGTAC	2																																																																											2
GTGTAT	1																																																																											1
GTGTGC	3	2																																																																										5
GTGTGG	1																																																																											1
GTGTTG	1																																																																											1
GTTACT	1																																																																											1
GTTATA	1																																																																											1
GTTCCA	1																																																																											1
GTTGAG	1																																																																											1
GTTGTC	1																																																																											1
GTTTAT	1																																																																											1
GTTTCG	3	1																																																																										4
GTTTGA	1																																																																											1
TAAAAA	11																																																																											11
TAAAAC	1																																																																											1
TAAAAG		1																																																																										1
TAAAAT	2																																																																											2
TAAACC	1																																																																											1
TAAACG		1																																																																										1
TAAAGA	1	2		1																																																																								4
TAAATA	3																																																																											3
TAAATG	1																																																																											1
TAAATT	2																																																																											2
TAACAA	1																																																																											1
TAACTA	1																																																																											1
TAACTT	1																																																																											1
TAAGGG	1																																																																											1
TAAGTA	1																																																																											1
TAATAT	2																																																																											2
TAATCA	1																																																																											1
TAATCT	1																																																																											1
TAATGA	2																																																																											2
TAATGC	1																																																																											1
TAATTA	1																																																																											1
TAATTT	4																																																																											4
TACAAA	1																																																																											1
TACAAT	1																																																																											1
TACACA	3																																																																											3
TACACC	1	2																																																																										3
TACACG	3			1																																																																								4
TACATA	1																																																																											1
TACATT	1																																																																											1
TACCCT	1																																																																											1
TACCGA	1																																																																											1
TACCTA	4																																																																											4
TACGTG	1																																																																											1
TACTCG	1																																																																											1
TACTCT	1																																																																											1
TACTTA	1																																																																											1
TACTTG	1																																																																											1
TAGAAT	1																																																																											1
TAGATA	2																																																																											2
TAGATC	1																																																																											1
TAGGAA	1																																																																											1
TAGGTA	1																																																																											1
TAGTAA	1																																																																											1
TAGTAT	1																																																																											1
TAGTCT	1																																																																											1
TAGTTA	1																																																																											1
TAGTTT	1																																																																											1
TATAAG	2																																																																											2
TATAAT	2																																																																											2
TATACA	1																																																																											1
TATACC	1																																																																											1
TATAGG	1																																																																											1
TATATC	1																																																																											1
TATATG	4																																																																											4
TATCAA	1																																																																											1
TATCGA	1																																																																											1
TATCTA	1																																																																											1
TATCTG	1																																																																											1
TATCTT	2																																																																											2
TATGAA	1	1																																																																										2
TATGTA	2																																																																											2
TATGTG	2																																																																											2
TATGTT	1																																																																											1
TATTAA	1																																																																											1
TATTAC	1																																																																											1
TATTCA	3																																																																											3
TATTGT	2																																																																											2
TATTTA	1																																																																											1
TATTTC	1																																																																											1
TATTTG	1																																																																											1
TATTTT	8																																																																											8
TCAAAA	9	2	2																																																																									13
TCAAAC	3																																																																											3
TCAAAG	3		1																																																																									4
TCAAAT	1																																																																											1
TCAAGA	1																																																																											1
TCACCA	1																																																																											1
TCACTC	1																																																																											1
TCAGAA	1																																																																											1
TCAGTG	1																																																																											1
TCATAA	2																																																																											2
TCATTA	1	1																																																																										2
TCATTT		1																																																																										1
TCCAAC	1																																																																											1
TCCAAG	2																																																																											2
TCCCGC	2																																																																											2
TCGGTT	1	1																																																																										2
TCGTTG	1																																																																											1
TCTAAG	1																																																																											1
TCTACC	1																																																																											1
TCTATC	1																																																																											1
TCTATT	1																																																																											1
TCTCTA	1																																																																											1
TCTGTC	2																																																																											2
TCTGTG	1																																																																											1
TCTTAA	2																																																																											2
TCTTAC	1																																																																											1
TCTTGG	1																																																																											1
TCTTTA	1																																																																											1
TCTTTT	1																																																																											1
TGAAAA	2	2																																																																										4
TGAAGA	1																																																																											1
TGAATA	1																																																																											1
TGAATG	1																																																																											1
TGACAA	2																																																																											2
TGACAC	1																																																																											1
TGACAG	4																																																																											4
TGACAT	2																																																																											2
TGACCG	2																																																																											2
TGACTC	1																																																																											1
TGAGAA	1																																																																											1
TGATTT	4																																																																											4
TGCCGG	1																																																																											1
TGCCGT	1																																																																											1
TGCCTA	1																																																																											1
TGCGAA		1																																																																										1
TGCGGC	1																																																																											1
TGCGGT	1																																																																											1
TGCTAA	1																																																																											1
TGCTGG		1																																																																										1
TGGACA	1																																																																											1
TGGAGC	1																																																																											1
TGGATG	1																																																																											1
TGGCCG	1																																																																											1
TGGTGA	1																																																																											1
TGGTGT					1																																																																							1
TGGTTT	1																																																																											1
TGTAAA	1																																																																											1
TGTAGA	1																																																																											1
TGTATA	1	1																																																																										2
TGTATG	1																																																																											1
TGTATT	1																																																																											1
TGTCAA	10																																																																											10
TGTCAC	1																																																																											1
TGTCAG	1																																																																											1
TGTCAT	3																																																																											3
TGTCCA	1																																																																											1
TGTGTA	1	1																																																																										2
TGTTCG	1																																																																											1
TGTTTA	1																																																																											1
TGTTTG	3																																																																											3
TGTTTT	2																																																																											2
TTAAAT	1																																																																											1
TTAACA	1																																																																											1
TTAACC	1																																																																											1
TTAAGA	2																																																																											2
TTAAGG	1																																																																											1
TTAATA	1																																																																											1
TTAATT	1																																																																											1
TTACAA	2																																																																											2
TTACAG	1																																																																											1
TTACAT	1																																																																											1
TTACGC	1																																																																											1
TTACTA	1																																																																											1
TTACTT	1																																																																											1
TTATAA	4																																																																											4
TTATAC	1																																																																											1
TTATAT		1																																																																										1
TTATCT	1																																																																											1
TTATGA	2																																																																											2
TTATTC	1																																																																											1
TTATTG	5																																																																											5
TTATTT	3																																																																											3
TTCAAA	3	1		1																																																																								5
TTCAAC	1																																																																											1
TTCAAG	1																																																																											1
TTCAGT	3																																																																											3
TTCATT	3																																																																											3
TTCCTA	1																																																																											1
TTCCTC			1																																																																									1
TTCGCC	1																																																																											1
TTCGTC	1																																																																											1
TTCTAA		1																																																																										1
TTCTGA	1																																																																											1
TTCTTT	1																																																																											1
TTGAAT	2																																																																											2
TTGACA	5																																																																											5
TTGACC	1																																																																											1
TTGACT	2																																																																											2
TTGAGT	1																																																																											1
TTGATC	1																																																																											1
TTGATT	2																																																																											2
TTGCAT	1																																																																											1
TTGCCC	1																																																																											1
TTGTAG	1																																																																											1
TTGTCA	3																																																																											3
TTGTGT	1																																																																											1
TTTAAA	2																																																																											2
TTTAAC	1																																																																											1
TTTAAT	3																																																																											3
TTTAGA	1																																																																											1
TTTAGG	2	1																																																																										3
TTTATA	3																																																																											3
TTTATC	2																																																																											2
TTTATT	5																																																																											5
TTTCAA	1																																																																											1
TTTCAT	1																																																																											1
TTTCGA	1																																																																											1
TTTCGG	3																																																																											3
TTTCTT	1																																																																											1
TTTGAA	12	2	1																																																																									15
TTTGAC	12	2																																																																										14
TTTGAG	11	3																																																																										14
TTTGAT	12	3	1																																																																									16
TTTGTA	2																																																																											2
TTTTAA	5																																																																											5
TTTTAC	1	1																																																																										2
TTTTAT	6																																																																											6
TTTTCA	5																																																																											5
TTTTCT	1																																																																											1
TTTTGA	3																																																																											3
TTTTTA	13																																																																											13
TTTTTC	1																																																																											1
TTTTTG	2																																																																											2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	26	13	7	4	7	3	12	3	6	5	3		2	1	2	1	3		2	1	3		2	1	1	2	1	1	1		1			1	1		1		2	1			1				1	1	1	1	2			1	5	6	3	5	147
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	40	30	21	19	22	20	13	22	17	9	11	20	11	8	11	7	5	12	9	2	4	10	7	3	1	2	2	1	3	4	4	3	1	3	2	2	2	2	1	2	1	1		1			1	1	1	2							1		377
AC/GT	-	-	-	465	249	160	110	65	45	38	23	21	10	10	8	6	5	5	6	2	4	6	3	2	2		1	1	3	1	1	3	1			2		1																																						1259
AG/CT	-	-	-	136	74	48	38	26	12	14	14	6	2	3		1	4	2	3	1	2					1																																																		387
AT/AT	-	-	-	281	89	35	23	12	8	6	6	2	1	1		2		1																																																										467
CG/CG	-	-	-	32	4					1																																																																		37
AAC/GTT	-	-	70	41	14	7	2	1	1																																																																			136
AAG/CTT	-	-	89	30	15	13	3	3	1	1		1	2		1	1						1																																																						161
AAT/ATT	-	-	1109	279	58	27	8	4	4				1																																																															1490
ACC/GGT	-	-	11	4																																																																								15
ACG/CGT	-	-	9	1	1	1																																																																						12
ACT/AGT	-	-	53	16	8	4		1				3																																																																85
AGC/CTG	-	-	17	1	1	1											1																																																											21
AGG/CCT	-	-	18	2	2		1																																																																					23
ATC/ATG	-	-	111	26	12	6	3	2																																																																				160
CCG/CGG	-	-	60	21	8	3			1																																																																			93
AAAC/GTTT	-	113	27	5	2	1	1		1	1	1	1					1	1																																																										155
AAAG/CTTT	-	38	6	5	4		2		1		1																																																																	57
AAAT/ATTT	-	962	207	53	22	12	8	2	1		1	1					1																																																											1270
AACC/GGTT	-	12	5	1	3	2	3	1	2	1	3	4	3	2	5	1	4																																																											52
AACG/CGTT	-	5	1	1																																																																								7
AACT/AGTT	-	24	3			1																																																																						28
AAGC/CTTG	-	11		1	1					1	2	1		1	1		4																																																											23
AAGG/CCTT	-	2	1	1																																																																								4
AAGT/ACTT	-	63	9	2	1																																																																							75
AATC/ATTG	-	41	4	1	1																																																																							47
AATG/ATTC	-	59	15	7	3	1	2	1	1	1				2																																																														92
AATT/AATT	-	93	12	2																																																																								107
ACAG/CTGT	-	117	49	17	10	8	6	2	1	2	3	2	1	2	1		2	1																																																										224
ACAT/ATGT	-	349	107	45	18	13	4	4	3	1	1	1		1																																																														547
ACCG/CGGT	-	3	3	1	2	4	2	2	2		1	3	3		2	3	4	1																																																										36
ACCT/AGGT	-	289	44	7	2																																																																							342
ACGC/CGTG	-	10	4	2																																																																								16
ACGG/CCGT	-	14	5	2	2																																																																							23
ACGT/ACGT	-	7	2																																																																									9
ACTC/AGTG	-	13	6	1	2	2	1	2	1	1	3	1	2	1	1	2	1			1																																																								41
ACTG/AGTC	-	67	30	12	12	5	4	3	6	7	5	5	3	5	1	1	5					1																																																						172
AGAT/ATCT	-	70	15	4	2	5						1																																																																97
AGCC/CTGG	-	2	4	3				1	1	1			1				2				1																																																							16
AGCG/CGCT	-	2																																																																										2
AGCT/AGCT	-	6	1																																																																									7
AGGC/CCTG	-	4																																																																										4
AGGG/CCCT	-	4	1																																																																									5
ATCC/ATGG	-	100	16	8	3	1		1	3	1		2	3		1	5	2	1																																																										147
ATCG/ATCG	-	3	2																																																																									5
ATGC/ATGC	-	11	1	1	2																																																																							15
CCCG/CGGG	-	5																																																																										5
AAAAC/GTTTT	211	9																																																																										220
AAAAG/CTTTT	104	2	2																																																																									108
AAAAT/ATTTT	900	44	2	3																																																																								949
AAACC/GGTTT	22																																																																											22
AAACG/CGTTT	29	3																																																																										32
AAACT/AGTTT	73	8	1																																																																									82
AAAGC/CTTTG	12																																																																											12
AAAGG/CCTTT	6	1																																																																										7
AAAGT/ACTTT	58	2																																																																										60
AAATC/ATTTG	169	31	8	1																																																																								209
AAATG/ATTTC	140	10	3				1				1	1																																																																156
AAATT/AATTT	415	23	1																																																																									439
AACAC/GTGTT	59	4																																																																										63
AACAG/CTGTT	30	2																																																																										32
AACAT/ATGTT	53	1	1																																																																									55
AACCC/GGGTT	3																																																																											3
AACCG/CGGTT	5																																																																											5
AACCT/AGGTT	133	26	15	19	11	16	26	28	24	33	29	45	49																																																															454
AACGC/CGTTG	9																																																																											9
AACGG/CCGTT	11	1																																																																										12
AACGT/ACGTT	40	4																																																																										44
AACTC/AGTTG	21	1																																																																										22
AACTG/AGTTC	29	3																																																																										32
AACTT/AAGTT	18																																																																											18
AAGAC/CTTGT	18																																																																											18
AAGAG/CTCTT	25							1																																																																				26
AAGAT/ATCTT	49	4	4		1		1																																																																					59
AAGCC/CTTGG	7	1																																																																										8
AAGCG/CGCTT	7																																																																											7
AAGCT/AGCTT	14	3																																																																										17
AAGGC/CCTTG	4								1					1																																																														6
AAGGG/CCCTT	5	2																																																																										7
AAGGT/ACCTT	45		1																																																																									46
AAGTC/ACTTG	27	1																																																																										28
AAGTG/ACTTC	36	3																																																																										39
AATAC/ATTGT	156	19	2			1	1																																																																					179
AATAG/ATTCT	66	7			1	1						1																																																																76
AATAT/ATATT	324	16	2																																																																									342
AATCC/ATTGG	23																																																																											23
AATCG/ATTCG	28	1																																																																										29
AATCT/AGATT	59	2	1																																																																									62
AATGC/ATTGC	28																																																																											28
AATGG/ATTCC	32	2																																																																										34
AATGT/ACATT	117	6																																																																										123
AATTC/AATTG	111	10	1	1									1																																																															124
ACACC/GGTGT	16	4																																																																										20
ACACG/CGTGT	34	2	1																																																																									37
ACACT/AGTGT	47	3		1	1																																																																							52
ACAGC/CTGTG	10	1																																																																										11
ACAGG/CCTGT	7																																																																											7
ACAGT/ACTGT	37	3																																																																										40
ACATC/ATGTG	44	4																																																																										48
ACATG/ATGTC	51																																																																											51
ACCAG/CTGGT	6																																																																											6
ACCAT/ATGGT	26	4																																																																										30
ACCCC/GGGGT	3		1																																																																									4
ACCCG/CGGGT	2																																																																											2
ACCCT/AGGGT	9																																																																											9
ACCGC/CGGTG	13	2			1																																																																							16
ACCGG/CCGGT	1																																																																											1
ACCGT/ACGGT	9																																																																											9
ACCTC/AGGTG	6																																																																											6
ACCTG/AGGTC	2																																																																											2
ACGAG/CGTCT	7																																																																											7
ACGAT/ATCGT	40	3																																																																										43
ACGCC/CGTGG	5																																																																											5
ACGCG/CGCGT	21	2																																																																										23
ACGCT/AGCGT	12																																																																											12
ACGGC/CCGTG	1																																																																											1
ACGGG/CCCGT	5																																																																											5
ACGTC/ACGTG	29	3	1	1																																																																								34
ACTAG/AGTCT	39	2	1																																																																									42
ACTAT/AGTAT	51	3																																																																										54
ACTCC/AGTGG	14	4	4	2	3	1	4	3	1	2	1	2		1																																																														42
ACTCG/AGTCG	1	1																																																																										2
ACTCT/AGAGT	19	3								1																																																																		23
ACTGC/AGTGC	12		1																																																																									13
ACTGG/AGTCC	12																																																																											12
AGAGC/CTCTG	5	1																																																																										6
AGAGG/CCTCT	6																																																																											6
AGATC/ATCTG	11	1																																																																										12
AGATG/ATCTC	20	4																																																																										24
AGCAT/ATGCT	19																																																																											19
AGCCC/CTGGG	2																																																																											2
AGCCG/CGGCT	2			1																																																																								3
AGCCT/AGGCT	4																																																																											4
AGCGC/CGCTG	2																																																																											2
AGCGG/CCGCT	1																																																																											1
AGCTC/AGCTG	5																																																																											5
AGGAT/ATCCT	23	1																																																																										24
AGGCC/CCTGG	3	1																																																																										4
AGGCG/CCTCG	9	1	1	1																																																																								12
AGGGG/CCCCT	8	2																																																																										10
ATATC/ATATG	24	1				1																																																																						26
ATCCC/ATGGG	12		1																																																																									13
ATCCG/ATCGG	3																																																																											3
ATCGC/ATGCG	9																																																																											9
ATGCC/ATGGC	3																																																																											3
CCCCG/CGGGG	5	1																																																																										6
CCGCG/CGCGG	48	5	1																																																																									54
AAAAAC/GTTTTT	5																																																																											5
AAAAAG/CTTTTT	15																																																																											15
AAAAAT/ATTTTT	78	3																																																																										81
AAAACC/GGTTTT	2																																																																											2
AAAACT/AGTTTT	7																																																																											7
AAAAGG/CCTTTT	2	2																																																																										4
AAAAGT/ACTTTT	11	2	1	1			1			1																																																																		17
AAAATC/ATTTTG	81	16	10																																																																									107
AAAATG/ATTTTC	23	3				1																																																																						27
AAAATT/AATTTT	28																																																																											28
AAACAC/GTGTTT	4																																																																											4
AAACAG/CTGTTT	1																																																																											1
AAACAT/ATGTTT	5																																																																											5
AAACCG/CGGTTT	11	2																																																																										13
AAACCT/AGGTTT	3	1																																																																										4
AAACGC/CGTTTG	1																																																																											1
AAACGT/ACGTTT	2	1																																																																										3
AAACTC/AGTTTG	26	5																																																																										31
AAACTG/AGTTTC	6	1																																																																										7
AAACTT/AAGTTT	1																																																																											1
AAAGAG/CTCTTT	3	1																																																																										4
AAAGAT/ATCTTT	9	4		1																																																																								14
AAAGGC/CCTTTG	1																																																																											1
AAAGTC/ACTTTG	36	7	4	1	1					1																																																																		50
AAAGTT/AACTTT	3																																																																											3
AAATAC/ATTTGT	17	1																																																																										18
AAATAG/ATTTCT	4																																																																											4
AAATAT/ATATTT	14	2																																																																										16
AAATCG/ATTTCG	1																																																																											1
AAATCT/AGATTT	4																																																																											4
AAATGC/ATTTGC	2																																																																											2
AAATGG/ATTTCC	2																																																																											2
AAATGT/ACATTT	8																																																																											8
AAATTC/AATTTG	37	6	1	1				1																																																																				46
AAATTG/AATTTC	9																																																																											9
AAATTT/AAATTT	7																																																																											7
AACAAG/CTTGTT		1																																																																										1
AACAAT/ATTGTT	11																																																																											11
AACACC/GGTGTT	3	1			1																																																																							5
AACACG/CGTGTT	1																																																																											1
AACAGT/ACTGTT	1																																																																											1
AACATG/ATGTTC	5																																																																											5
AACATT/AATGTT	4																																																																											4
AACCAG/CTGGTT	3	1																																																																										4
AACCAT/ATGGTT	1																																																																											1
AACCGC/CGGTTG	1																																																																											1
AACCGT/ACGGTT	1																																																																											1
AACCTC/AGGTTG	2																																																																											2
AACCTG/AGGTTC	1																																																																											1
AACCTT/AAGGTT	4																																																																											4
AACGAC/CGTTGT	2																																																																											2
AACGAT/ATCGTT	1																																																																											1
AACGGC/CCGTTG	2																																																																											2
AACGTC/ACGTTG	3																																																																											3
AACTAC/AGTTGT	2																																																																											2
AACTAG/AGTTCT	2																																																																											2
AACTAT/AGTTAT	4																																																																											4
AACTCC/AGTTGG	1																																																																											1
AACTCT/AGAGTT	2																																																																											2
AACTGC/AGTTGC	2																																																																											2
AACTGG/AGTTCC	1																																																																											1
AACTGT/ACAGTT	2																																																																											2
AACTTC/AAGTTG	3	1																																																																										4
AACTTG/AAGTTC	4																																																																											4
AAGAAT/ATTCTT	3																																																																											3
AAGACC/CTTGGT	4	1																																																																										5
AAGACG/CGTCTT	1																																																																											1
AAGACT/AGTCTT	1																																																																											1
AAGAGG/CCTCTT	6	1	1																																																																									8
AAGAGT/ACTCTT	3																																																																											3
AAGATC/ATCTTG	2																																																																											2
AAGATG/ATCTTC	7																																																																											7
AAGATT/AATCTT	6																																																																											6
AAGCAG/CTGCTT	1																																																																											1
AAGCAT/ATGCTT	2																																																																											2
AAGCCC/CTTGGG	1																																																																											1
AAGCCG/CGGCTT	2																																																																											2
AAGCGC/CGCTTG	3																																																																											3
AAGCGG/CCGCTT	3																																																																											3
AAGCGT/ACGCTT	2																																																																											2
AAGGAG/CCTTCT	1	1																																																																										2
AAGGCC/CCTTGG	1																																																																											1
AAGGCG/CCTTCG	1																																																																											1
AAGGGC/CCCTTG	1	2																																																																										3
AAGGGT/ACCCTT	2																																																																											2
AAGGTC/ACCTTG	1																																																																											1
AAGTAC/ACTTGT	1	1																																																																										2
AAGTAG/ACTTCT	2																																																																											2
AAGTAT/ACTTAT	6																																																																											6
AAGTCC/ACTTGG	2																																																																											2
AAGTCT/ACTTAG	1																																																																											1
AAGTGG/ACTTCC	1																																																																											1
AATACC/ATTGGT	1																																																																											1
AATACG/ATTCGT	1																																																																											1
AATACT/AGTATT	4	1																																																																										5
AATAGC/ATTGCT	1																																																																											1
AATAGG/ATTCCT	2																																																																											2
AATAGT/ACTATT	6																																																																											6
AATATC/ATATTG	3																																																																											3
AATATG/ATATTC	12	1																																																																										13
AATATT/AATATT	9																																																																											9
AATCAG/ATTCTG	2		1																																																																									3
AATCAT/ATGATT	11																																																																											11
AATCGT/ACGATT	1																																																																											1
AATCTC/AGATTG	1		2																																																																									3
AATCTG/AGATTC	1																																																																											1
AATGAC/ATTGTC	12																																																																											12
AATGAG/ATTCTC	2																																																																											2
AATGAT/ATCATT	4	1																																																																										5
AATGCG/ATTCGC	2	5																																																																										7
AATGCT/AGCATT	2																																																																											2
AATGTC/ACATTG	22																																																																											22
AATGTG/ACATTC	1																																																																											1
AATTAC/AATTGT	7																																																																											7
AATTAG/AATTCT	3	1																																																																										4
AATTAT/AATTAT	14																																																																											14
AATTCC/AATTGG	1																																																																											1
ACACAG/CTGTGT	3																																																																											3
ACACAT/ATGTGT	12	1																																																																										13
ACACCC/GGGTGT	1	1																																																																										2
ACACCG/CGGTGT	4	1																																																																										5
ACACCT/AGGTGT	3	2																																																																										5
ACACGC/CGTGTG	10	3	1																																																																									14
ACACGT/ACGTGT	6	1		1																																																																								8
ACACTC/AGTGTG								1																																																																				1
ACACTG/AGTGTC	6																																																																											6
ACAGAG/CTCTGT	5																																																																											5
ACAGAT/ATCTGT	1																																																																											1
ACAGCG/CGCTGT	2																																																																											2
ACAGCT/AGCTGT	4																																																																											4
ACAGTG/ACTGTC	9																																																																											9
ACATAG/ATGTCT	1																																																																											1
ACATAT/ATATGT	12	1																																																																										13
ACATCC/ATGTGG	4	1																																																																										5
ACATCG/ATGTCG	3																																																																											3
ACATCT/AGATGT	3																																																																											3
ACATGC/ATGTGC	1																																																																											1
ACATGG/ATGTCC	3																																																																											3
ACATGT/ACATGT	1																																																																											1
ACCACT/AGTGGT	3																																																																											3
ACCAGC/CTGGTG	1	2																																																																										3
ACCAGT/ACTGGT	1																																																																											1
ACCATC/ATGGTG	3																																																																											3
ACCATG/ATGGTC	1																																																																											1
ACCCAT/ATGGGT	2																																																																											2
ACCCCT/AGGGGT	1																																																																											1
ACCCGC/CGGGTG	1																																																																											1
ACCGAT/ATCGGT	3																																																																											3
ACCGCC/CGGTGG	3																																																																											3
ACCGCG/CGCGGT	1																																																																											1
ACCGGC/CCGGTG	1																																																																											1
ACCGGG/CCCGGT	1																																																																											1
ACCGTC/ACGGTG	1																																																																											1
ACCGTG/ACGGTC	3																																																																											3
ACCTAG/AGGTCT	2																																																																											2
ACCTAT/AGGTAT	11																																																																											11
ACCTCG/AGGTCG	1	1																																																																										2
ACCTCT/AGAGGT	3																																																																											3
ACCTGC/AGGTGC	2																																																																											2
ACGACT/AGTCGT	2																																																																											2
ACGAGT/ACTCGT	3																																																																											3
ACGATG/ATCGTC	3																																																																											3
ACGCCC/CGTGGG	4																																																																											4
ACGCCG/CGGCGT	2																																																																											2
ACGCGC/CGCGTG	2																																																																											2
ACGGCC/CCGTGG	1																																																																											1
ACGGCG/CCGTCG	1																																																																											1
ACGGGG/CCCCGT	1																																																																											1
ACGTAG/ACGTCT	1																																																																											1
ACGTAT/ACGTAT	1																																																																											1
ACGTGC/ACGTGC	1																																																																											1
ACTAGC/AGTGCT	1																																																																											1
ACTAGG/AGTCCT	1																																																																											1
ACTATC/AGTGAT	6																																																																											6
ACTATG/AGTCAT	1																																																																											1
ACTCCT/AGGAGT	1																																																																											1
ACTCGC/AGTGCG	5	1																																																																										6
ACTCTC/AGAGTG	2																																																																											2
ACTCTG/AGAGTC	1																																																																											1
ACTGAT/AGTATC	1																																																																											1
ACTGCT/AGCAGT	3																																																																											3
AGAGAT/ATCTCT	4																																																																											4
AGAGCT/AGCTCT	2																																																																											2
AGAGGC/CCTCTG	2																																																																											2
AGAGGG/CCCTCT	1																																																																											1
AGATAT/ATATCT	10	1																																																																										11
AGATCC/ATCTGG	2																																																																											2
AGATCG/ATCTCG	1																																																																											1
AGATCT/AGATCT	2																																																																											2
AGCCAT/ATGGCT	2																																																																											2
AGCCGC/CGGCTG	6																																																																											6
AGCCGG/CCGGCT	2																																																																											2
AGCGAT/ATCGCT	1																																																																											1
AGCGCG/CGCGCT	1																																																																											1
AGCGGC/CCGCTG	1																																																																											1
AGCGGG/CCCGCT	6																																																																											6
AGCTAT/AGCTAT		1																																																																										1
AGCTCC/AGCTGG	1																																																																											1
AGGATC/ATCCTG	1																																																																											1
AGGCAT/ATGCCT	2																																																																											2
AGGCGC/CCTGCG	2																																																																											2
AGGCGG/CCGCCT	7	1	1																																																																									9
AGGGCG/CCCTCG	2																																																																											2
AGGGGG/CCCCCT	4																																																																											4
ATATCC/ATATGG	2																																																																											2
ATATCG/ATATCG	1																																																																											1
ATATGC/ATATGC	2																																																																											2
ATCATG/ATCATG	2																																																																											2
ATCCGC/ATGCGG	1																																																																											1
ATCGCC/ATGGCG	1																																																																											1
ATCGGC/ATGCCG	1																																																																											1
CCCCCG/CGGGGG	1																																																																											1
CCCGCG/CGCGGG	8																																																																											8
CCGGCG/CCGGCG	1																																																																											1
