Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-9/megassr/results/hub_GCA_021396255.1/fasta/hub_GCA_021396255.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              577
Total size of examined sequences (bp):           38985207
Total number of identified SSRs:                 6917
Number of SSR containing sequences:              129
Number of sequences containing more than 1 SSR:  91
Number of SSRs present in compound formation:    439


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	619
2	1190
3	2052
4	310
5	1326
6	1420

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	38	16	22	24	13	15	16	10	15	7	8	11	3	2	4	6	4	7	3	2	2	2	3	2	2	1	5	2	1		2		1	1		1						1			1		1			1				1		1										1																												1	259
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	1	9	3	2	1	1	1	1	2	1						3										1		1		1	1	2	1	1		1						1				1	1					2			1	1	1																																					45
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	7	2	5	2	5	1	1		2	1		2	1				1								1	1				1				1			2						1		1	1		1				1		1		3		1																																					46
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	30	26	28	19	17	13	21	10	12	8	11	2	2	2	5	4	4	5	7	3	4	4	2	2	3	2	1	5		2	1			1	1		1	2							1						1	2	1			2	1																										1												269
AC	-	-	-	38	8	19	11	2	2		2	5	4																																																																																																			91
AG	-	-	-	79	47	17	19	8	8	7	2	3	3		1		2									1																																																																																						197
AT	-	-	-	24	13	11	6	2		1		1	1		1							1																																																																																										61
CA	-	-	-	44	11	14	8	6	5	4		1		1	1		2																																																																																															97
CG	-	-	-	3	2																																																																																																											5
CT	-	-	-	61	29	13	11	7	4	4	1	1			2		1		2							1		1																																																																																				138
GA	-	-	-	54	33	21	9	5	2	1	1	1	1	1	2	2																																																																																																133
GC	-	-	-	10	2		1																																																																																																									13
GT	-	-	-	22	12	9	4	1	2					1																																																																																																		51
TA	-	-	-	28	12	9	2	7	4		4	2																																																																																																				68
TC	-	-	-	82	40	23	20	14	4	5	2	7	1			1			1																																																																																													200
TG	-	-	-	53	33	13	19	6	7	4							1																																																																																															136
AAC	-	-	15	4	4	1	2		2	1								1																																																																																														30
AAG	-	-	58	10	12	2	1			1												1	1																																																																																									86
AAT	-	-	6	3	1														1																																																																																													11
ACA	-	-	11	8	4	2		2	1																																																																																																							28
ACC	-	-	15	7	1																																																																																																											23
ACG	-	-	10	7		1	2				1																																																																																																					21
ACT	-	-	2	1																																																																																																												3
AGA	-	-	14	8	5			1																																																																																																								28
AGC	-	-	26	12	3	2	1																																																																																																									44
AGG	-	-	5	4	3		1																																																																																																									13
AGT	-	-	2																																																																																																													2
ATA	-	-	7	1	1	1																																																																																																										10
ATC	-	-	1																																																																																																													1
ATG	-	-	1																																																																																																													1
ATT	-	-	3	4		1			1																																																																																																							9
CAA	-	-	28	14	3	4	2	1	1		1	2																																																																																																				56
CAC	-	-	22	7	6																																																																																																											35
CAG	-	-	75	48	21	9	5	3	1	1																																																																																																						163
CAT	-	-	3	1	1			1																																																																																																								6
CCA	-	-	15	10	4	1	1																																																																																																									31
CCG	-	-	22	3	5			1																																																																																																								31
CCT	-	-	17	5		2	1																																																																																																									25
CGA	-	-	26	6	2	1																		1																																																																																								36
CGC	-	-	17	10																																																																																																												27
CGG	-	-	26	3	1	2																																																																																																										32
CGT	-	-	8	2			1			1																																																																																																						12
CTC	-	-	32	3	6	1																																																																																																										42
CTG	-	-	51	30	12	2	1	1																																																																																																								97
CTT	-	-	33	6		1	1																																																																																																									41
GAA	-	-	26	11	4	1	1									1																																																																																																44
GAC	-	-	30	12	3	5	2	1																																																																																																								53
GAG	-	-	31	6	4	1																																																																																																										42
GAT	-	-	2	1																																																																																																												3
GCA	-	-	46	19	14	1	3	1																																																																																																								84
GCC	-	-	26	6	2		1																																																																																																									35
GCG	-	-	26	4			1																																																																																																									31
GCT	-	-	49	19	7	4			1																																																																																																							80
GGA	-	-	17	1	1	2																																																																																																										21
GGC	-	-	44	10	3																																																																																																											57
GGT	-	-	22	8	3																																																																																																											33
GTA	-	-	3	1		1																																																																																																										5
GTC	-	-	27	13	3																																																																																																											43
GTG	-	-	15	6	2	1		1	1																																																																																																							26
GTT	-	-	21	10	1	3	2		1			1																																																																																																				39
TAA	-	-	3	2	1				1																																																																																																							7
TAC	-	-	2																																																																																																													2
TAG	-	-	1	1																																																																																																												2
TAT	-	-	3			1																																																																																																										4
TCA	-	-	2	1																																																																																																												3
TCC	-	-	23	5	2	3	1																																																																																																									34
TCG	-	-	39	11	4	1		1																																																																																																								56
TCT	-	-	21	14	6	3	2	1																																																																																																								47
TGA	-	-	5	2																																																																																																												7
TGC	-	-	76	42	14	10	3	1	2																																																																																																							148
TGG	-	-	17	5	2																																																																																																											24
TGT	-	-	21	14	5	5	2	1	1	1								1		1																																																																																												52
TTA	-	-	6	7	2	1			1				2								1		2																																																																																									22
TTC	-	-	35	13	2	7				1									1				1																																																																																									60
TTG	-	-	26	7		5	2	2							1			1																																																																																														44
AAAC	-	2	2																																																																																																													4
AAAG	-	12	5	1	1																																																																																																											19
AAAT	-	7																																																																																																														7
AACA	-	1																																																																																																														1
AAGA	-	10		1																																																																																																												11
AAGC	-	1																																																																																																														1
AAGG	-	1																																																																																																														1
AATA	-	4																																																																																																														4
ACAA	-	4																																																																																																														4
ACAG	-	1	1	1																																																																																																												3
ACAT	-	1			1		1																																																																																																									3
ACCA	-	1																																																																																																														1
ACTG	-	1	1																																																																																																													2
AGAA	-	16	3						1																																																																																																							20
AGAC	-	1		1																																																																																																												2
AGCC	-	2																																																																																																														2
AGCG	-	1																																																																																																														1
AGGA	-	2																																																																																																														2
AGGC	-	1																																																																																																														1
AGTG	-	1																																																																																																														1
ATAA	-	2																																																																																																														2
ATAC	-	2																																																																																																														2
ATTA	-	1																																																																																																														1
ATTT	-	3	1																																																																																																													4
CAAA	-	1																																																																																																														1
CAAG	-	1																																																																																																														1
CAGA	-		1																																																																																																													1
CAGC	-	1																																																																																																														1
CATG	-	1																																																																																																														1
CCAC	-	1																																																																																																														1
CCAT	-	2		1																																																																																																												3
CCGA	-	1																																																																																																														1
CCGG	-	1																																																																																																														1
CCTC	-	2	1																																																																																																													3
CGAA	-		1																																																																																																													1
CGAC	-	1																																																																																																														1
CGTC	-	1																																																																																																														1
CGTG	-	1	1																																																																																																													2
CGTT	-	2																																																																																																														2
CTCA	-	1		1																																																																																																												2
CTCC	-	1																																																																																																														1
CTGC	-	2				1																																																																																																										3
CTGT	-	1																																																																																																														1
CTTC	-	1																																																																																																														1
CTTT	-	8		1																																																																																																												9
GAAA	-	13	2	1		1																																																																																																										17
GAAC	-	1																																																																																																														1
GAAG	-	2	2																																																																																																													4
GACA	-	3																																																																																																														3
GAGC	-	1																																																																																																														1
GAGG	-	1																																																																																																														1
GAGT	-	1																																																																																																														1
GCAC	-	1																																																																																																														1
GCAG	-	1			1																																																																																																											2
GCCA	-		1	2																																																																																																												3
GCGA	-	2																																																																																																														2
GCGT	-	1																																																																																																														1
GCTC	-	1																																																																																																														1
GCTG	-	3																																																																																																														3
GGAA	-	1	1																																																																																																													2
GGCA	-	2																																																																																																														2
GGCT	-	1																																																																																																														1
GGGA	-	2																																																																																																														2
GGTT	-	1																																																																																																														1
GTAC	-	1																																																																																																														1
GTCG	-	1																																																																																																														1
GTGA	-				1																																																																																																											1
GTGC	-	1																																																																																																														1
GTTC	-		1																																																																																																													1
GTTG	-	1	1																																																																																																													2
GTTT	-	1																																																																																																														1
TAAA	-	5																																																																																																														5
TATT	-	2																																																																																																														2
TCAC	-	2																																																																																																														2
TCCA	-	1																																																																																																														1
TCCC	-	1																																																																																																														1
TCCT	-	1	1																																																																																																													2
TCTA	-	1																																																																																																														1
TCTG	-	1	4																																																																																																													5
TCTT	-	8	1	1										1																																																																																																		11
TGAC	-			1																																																																																																												1
TGCA	-	1																																																																																																														1
TGCC	-		1																																																																																																													1
TGCT	-	1							1																																																																																																							2
TGGA	-	1																																																																																																														1
TGGC	-	3	1																																																																																																													4
TGTA	-	1	1																																																																																																													2
TGTC	-	2																																																																																																														2
TGTT	-	2		1																																																																																																												3
TTAA	-	2																																																																																																														2
TTAT	-	2																																																																																																														2
TTCA	-	1																																																																																																														1
TTCC	-	2																																																																																																														2
TTCT	-	6	2																																																																																																													8
TTGA	-	1																																																																																																														1
TTGC	-	1																																																																																																														1
TTGG	-	1																																																																																																														1
TTGT	-	2																																																																																																														2
TTTA	-	3	2	1																																																																																																												6
TTTC	-	25	10																																																																																																													35
TTTG	-	7	1																																																																																																													8
AAAAC	8	1			1																																																																																																											10
AAAAG	58	8	1																																																																																																													67
AAAAT	19	5																																																																																																														24
AAACA	9	3	1																																																																																																													13
AAACG	3	1	1																																																																																																													5
AAAGA	28	2			1																																																																																																											31
AAAGG	1																																																																																																															1
AAAGT	1																																																																																																															1
AAATA	14	2	1																																																																																																													17
AAATG	2	1																																																																																																														3
AAATT	2																																																																																																															2
AACAA	4	1																																																																																																														5
AACAC			1																																																																																																													1
AACCA	4																																																																																																															4
AACCC	1																																																																																																															1
AACGA	1																																																																																																															1
AACGC		1																																																																																																														1
AAGAA	26	4																																																																																																														30
AAGAC	2																																																																																																															2
AAGAG	7																																																																																																															7
AAGCA	2																																																																																																															2
AAGGA	1	1																																																																																																														2
AAGGC	1																																																																																																															1
AAGTG	1																																																																																																															1
AATAA	13	2	1						1																																																																																																							17
AATAC	1																																																																																																															1
AATCA	2																																																																																																															2
AATCT	1																																																																																																															1
AATGA	2																																																																																																															2
AATGC	1																																																																																																															1
AATTA	1																																																																																																															1
ACAAA	5	1																																																																																																														6
ACAAC	2																																																																																																															2
ACAAG	1	1																																																																																																														2
ACACA	1																																																																																																															1
ACACC		1																																																																																																														1
ACAGA	1																																																																																																															1
ACAGC	2																																																																																																															2
ACATC	1																																																																																																															1
ACCAA	2																																																																																																															2
ACCAG	1																																																																																																															1
ACCAT	2																																																																																																															2
ACCGA	1																																																																																																															1
ACCTC	1																																																																																																															1
ACGAA	1																																																																																																															1
ACGAC		1	1																																																																																																													2
ACGAG	1																																																																																																															1
ACGCG	1																																																																																																															1
ACTCA	1			1																																																																																																												2
ACTGG	1																																																																																																															1
ACTTC	2																																																																																																															2
ACTTG	1																																																																																																															1
AGAAA	26	4	1																																																																																																													31
AGAAC	2																																																																																																															2
AGAAG	12																																																																																																															12
AGAAT	1																																																																																																															1
AGACA	1																																																																																																															1
AGACC	1																																																																																																															1
AGACG	2																																																																																																															2
AGAGA	6																																																																																																															6
AGAGG	2																																																																																																															2
AGATA	1																																																																																																															1
AGATG	2																																																																																																															2
AGCAA	2																																																																																																															2
AGCAC		1																																																																																																														1
AGCCA	2																																																																																																															2
AGCCC	1																																																																																																															1
AGGAA	1	1																																																																																																														2
AGGAC	2																																																																																																															2
AGGCC	1																																																																																																															1
AGGGA	1	1																																																																																																														2
AGGGG	1																																																																																																															1
AGGGT	1																																																																																																															1
AGTCG	1																																																																																																															1
AGTGC	2																																																																																																															2
ATAAA	18																																																																																																															18
ATACA	2																																																																																																															2
ATACC	1																																																																																																															1
ATACG	1																																																																																																															1
ATATC	1																																																																																																															1
ATATT	1																																																																																																															1
ATCAA	2																																																																																																															2
ATCAC	1																																																																																																															1
ATCAG	2																																																																																																															2
ATCCA		1																																																																																																														1
ATCGC	2																																																																																																															2
ATCGT	1																																																																																																															1
ATCTA	1																																																																																																															1
ATGCA	1																																																																																																															1
ATGCC	1																																																																																																															1
ATGCG	3																																																																																																															3
ATGGC	1																																																																																																															1
ATTAT	1																																																																																																															1
ATTCT	1																																																																																																															1
ATTGA	1																																																																																																															1
ATTGC	1																																																																																																															1
ATTGT	2	1																																																																																																														3
ATTTA	2																																																																																																															2
ATTTC	1																																																																																																															1
ATTTG		1																																																																																																														1
ATTTT	11	2																																																																																																														13
CAAAA	9		1																																																																																																													10
CAAAC	2																																																																																																															2
CAAAG	2	1																																																																																																														3
CAACA	1	1																																																																																																														2
CAACC	1																																																																																																															1
CAAGA	1																																																																																																															1
CAAGG	2																																																																																																															2
CAAGT	1																																																																																																															1
CAATA	1	1																																																																																																														2
CAATG	1																																																																																																															1
CACAC			1																																																																																																													1
CACAG	1																																																																																																															1
CACAT	2																																																																																																															2
CACCA	1																																																																																																															1
CACCG	1																																																																																																															1
CACCT	1																																																																																																															1
CACGA	1	1																																																																																																														2
CACTT	1																																																																																																															1
CAGCA	2																																																																																																															2
CAGCT	1																																																																																																															1
CAGGC	3																																																																																																															3
CAGTA	1																																																																																																															1
CAGTC	1																																																																																																															1
CATAG	1																																																																																																															1
CATAT	1																																																																																																															1
CATCA	2																																																																																																															2
CATCC		1																																																																																																														1
CATCG	2																																																																																																															2
CATCT	2																																																																																																															2
CATGG	1	1																																																																																																														2
CCAAA	1																																																																																																															1
CCACA	1																																																																																																															1
CCAGA	2																																																																																																															2
CCAGC		1																																																																																																														1
CCAGG	1																																																																																																															1
CCATC	1																																																																																																															1
CCATG	1																																																																																																															1
CCCAG	1																																																																																																															1
CCCAT	3																																																																																																															3
CCCCT	4																																																																																																															4
CCCTC	1																																																																																																															1
CCCTT	2	1																																																																																																														3
CCGTA	1																																																																																																															1
CCTCC		1																																																																																																														1
CCTCG	2																																																																																																															2
CCTCT	1																																																																																																															1
CCTGG	3																																																																																																															3
CCTGT	1																																																																																																															1
CCTTG	4																																																																																																															4
CCTTT	1																																																																																																															1
CGAAA	1																																																																																																															1
CGAGC	1																																																																																																															1
CGATG	1																																																																																																															1
CGCAA	1																																																																																																															1
CGCAT	1																																																																																																															1
CGCCG	2																																																																																																															2
CGCGC	1																																																																																																															1
CGTCA	1																																																																																																															1
CGTCT	1																																																																																																															1
CTACC		1																																																																																																														1
CTCAC	1	1																																																																																																														2
CTCAT	1																																																																																																															1
CTCCC			1																																																																																																													1
CTCCT	2										1																																																																																																					3
CTCGA	1																																																																																																															1
CTCGC	1																																																																																																															1
CTCGT	1			1																																																																																																												2
CTCTC	3	1																																																																																																														4
CTCTT	5																																																																																																															5
CTGAC	1																																																																																																															1
CTGAT	1																																																																																																															1
CTGCA	1																																																																																																															1
CTGCC	1																																																																																																															1
CTGGC	3	1																																																																																																														4
CTGGG	1																																																																																																															1
CTGTG	3																																																																																																															3
CTGTT	1																																																																																																															1
CTTCG	1																																																																																																															1
CTTCT	5	1																																																																																																														6
CTTGA	1	1																																																																																																														2
CTTGC	3	1																																																																																																														4
CTTGT	1																																																																																																															1
CTTTC	5		1																																																																																																													6
CTTTG	1			1																																																																																																												2
CTTTT	27	4	1																																																																																																													32
GAAAA	28	1	1																																																																																																													30
GAAAC	9	1																																																																																																														10
GAAAG	2																																																																																																															2
GAAAT	4																																																																																																															4
GAAGA	2	1																																																																																																														3
GAAGC	1																																																																																																															1
GAAGG	1																																																																																																															1
GAATG	1																																																																																																															1
GACAA	1		1																																																																																																													2
GACAC	2																																																																																																															2
GACCA	2		1																																																																																																													3
GACGA	2																																																																																																															2
GACTG	1																																																																																																															1
GAGAA	3	1																																																																																																														4
GAGAC	5	1																																																																																																														6
GAGAG	4	1																																																																																																														5
GAGCT	1																																																																																																															1
GAGGA	1	1																																																																																																														2
GAGGC	1																																																																																																															1
GAGGT	2	1																																																																																																														3
GATAA	1																																																																																																															1
GATCA	1																																																																																																															1
GATGC	3																																																																																																															3
GATTT	1		1																																																																																																													2
GCAAA		1																																																																																																														1
GCAAC	1																																																																																																															1
GCAAG	2	1																																																																																																														3
GCACT	1																																																																																																															1
GCAGA	1																																																																																																															1
GCATC	1																																																																																																															1
GCATG	1																																																																																																															1
GCATT	1																																																																																																															1
GCCAG	4																																																																																																															4
GCCCA		1																																																																																																														1
GCCGT	1																																																																																																															1
GCCTG	2		1																																																																																																													3
GCCTT	1																																																																																																															1
GCGAC	2																																																																																																															2
GCGAG	1																																																																																																															1
GCGCG	1																																																																																																															1
GCGGC	2																																																																																																															2
GCTCT	1																																																																																																															1
GCTGG	1																																																																																																															1
GCTGT	2																																																																																																															2
GCTTT	1																																																																																																															1
GGAAA	4																																																																																																															4
GGAAG	3																																																																																																															3
GGAGA	3		1																																																																																																													4
GGATT	1																																																																																																															1
GGCAC	2																																																																																																															2
GGCAG	1																																																																																																															1
GGCCA	5																																																																																																															5
GGCCT	5																																																																																																															5
GGCGC	1																																																																																																															1
GGCTG	2																																																																																																															2
GGCTT	3																																																																																																															3
GGGAA	1																																																																																																															1
GGGAC	1																																																																																																															1
GGGAG	2																																																																																																															2
GGGCA	1																																																																																																															1
GGGCT	3																																																																																																															3
GGGGA	2																																																																																																															2
GGGTT	1																																																																																																															1
GGTCT	1																																																																																																															1
GGTGA	1																																																																																																															1
GGTGG	1																																																																																																															1
GGTGT		1																																																																																																														1
GGTTG	1																																																																																																															1
GGTTT		1																																																																																																														1
GTCAA	2																																																																																																															2
GTCCT	1																																																																																																															1
GTCGA	4																																																																																																															4
GTCGT	1		2																																																																																																													3
GTCTC			1																																																																																																													1
GTCTG	2			1																																																																																																												3
GTCTT	2																																																																																																															2
GTGAC	1																																																																																																															1
GTGAG	3		1																																																																																																													4
GTGAT	1			1																																																																																																												2
GTGCA	2																																																																																																															2
GTGCC	1																																																																																																															1
GTGCT	2	2																																																																																																														4
GTGGC	1																																																																																																															1
GTGGT	1																																																																																																															1
GTGTC	1																																																																																																															1
GTGTG	2																																																																																																															2
GTGTT		1																																																																																																														1
GTTGC	5																																																																																																															5
GTTTC	2																																																																																																															2
GTTTG		1																																																																																																														1
GTTTT	8																																																																																																															8
TAAAA	10		1																																																																																																													11
TAACA	2																																																																																																															2
TACCT	1																																																																																																															1
TAGAG	1																																																																																																															1
TAGAT	1																																																																																																															1
TAGCA	1																																																																																																															1
TATAT		1																																																																																																														1
TATCC	1																																																																																																															1
TATCG	1																																																																																																															1
TATTA	1																																																																																																															1
TATTG	1																																																																																																															1
TATTT	7																																																																																																															7
TCAAA		1																																																																																																														1
TCACA		1																																																																																																														1
TCACC		1																																																																																																														1
TCACG	1																																																																																																															1
TCACT			1																																																																																																													1
TCAGC	1																																																																																																															1
TCATG	2																																																																																																															2
TCATT	1																																																																																																															1
TCCCC	2																																																																																																															2
TCCCT	1	2																																																																																																														3
TCCTC	1																																																																																																															1
TCCTG	1																																																																																																															1
TCCTT	2																																																																																																															2
TCGAC	1	1																																																																																																														2
TCGAT	1																																																																																																															1
TCGCC	1																																																																																																															1
TCGTG	1																																																																																																															1
TCGTT	3																																																																																																															3
TCTCA	4	1																																																																																																														5
TCTCC	3	1																																																																																																														4
TCTCG	2																																																																																																															2
TCTCT	2																																																																																																															2
TCTTC	7																																																																																																															7
TCTTG	5	1																																																																																																														6
TCTTT	20	5	2																																																																																																													27
TGAAT	1																																																																																																															1
TGACG		1																																																																																																														1
TGAGA	1																																																																																																															1
TGATG	2																																																																																																															2
TGATT		1																																																																																																														1
TGCAG	1																																																																																																															1
TGCAT	1																																																																																																															1
TGCCC	1																																																																																																															1
TGCCT	1	1																																																																																																														2
TGCGA	1																																																																																																															1
TGCGG	1																																																																																																															1
TGCGT	1																																																																																																															1
TGCTT	2																																																																																																															2
TGGAA	1																																																																																																															1
TGGAT	1																																																																																																															1
TGGCA	2																																																																																																															2
TGGCC	5																																																																																																															5
TGGCT	1																																																																																																															1
TGGGA	1	1																																																																																																														2
TGGGC	2	1																																																																																																														3
TGGGT	1																																																																																																															1
TGGTC		1																																																																																																														1
TGTAA	2																																																																																																															2
TGTCA	1																																																																																																															1
TGTCG	3																																																																																																															3
TGTCT	4																																																																																																															4
TGTGA	1																																																																																																															1
TGTGC	2	1																																																																																																														3
TGTGG	1																																																																																																															1
TGTGT	2																																																																																																															2
TGTTA		1																																																																																																														1
TGTTG	3																																																																																																															3
TGTTT	7	1																																																																																																														8
TTACT	1																																																																																																															1
TTATT	6										1																																																																																																					7
TTCAC	2																																																																																																															2
TTCCC	1																																																																																																															1
TTCGA	1																																																																																																															1
TTCGT	2																																																																																																															2
TTCTC	4																																																																																																															4
TTCTG	4																																																																																																															4
TTCTT	27	4	1																																																																																																													32
TTGAG	1																																																																																																															1
TTGAT		1																																																																																																														1
TTGCA	1																																																																																																															1
TTGCG	1																																																																																																															1
TTGCT	2		2																																																																																																													4
TTGGC	1																																																																																																															1
TTGTC	3																																																																																																															3
TTGTG	1													1																																																																																																		2
TTGTT	6																																																																																																															6
TTTAC	1																																																																																																															1
TTTAT	15	1																																																																																																														16
TTTCA	1		1																																																																																																													2
TTTCC	1		1																																																																																																													2
TTTCG	1																																																																																																															1
TTTCT	41	9	2																																																																																																													52
TTTGA	5	1	2																																																																																																													8
TTTGC	1																																																																																																															1
TTTGG	1																																																																																																															1
TTTGT	8	1																																																																																																														9
TTTTA	31																																																																																																															31
TTTTC	86	12	1																																																																																																													99
TTTTG	14	3																																																																																																														17
AAAAAC	3																																																																																																															3
AAAAAG	9	3																																																																																																														12
AAAAAT	9	3										1																																																																																																				13
AAAACA	4																																																																																																															4
AAAAGA	14	1																																																																																																														15
AAAAGC	1																																																																																																															1
AAAAGG	1																																																																																																															1
AAAATA	3																																																																																																															3
AAAATC	3	1																																																																																																														4
AAACAA	2																																																																																																															2
AAACAC	1																																																																																																															1
AAACAG	1																																																																																																															1
AAACCA	1																																																																																																															1
AAACGA	1																																																																																																															1
AAACGG	1																																																																																																															1
AAAGAA	10	2																																																																																																														12
AAAGAC	1																																																																																																															1
AAAGCC	1																																																																																																															1
AAAGTC	1																																																																																																															1
AAATAA	4																																																																																																															4
AAATAC	1																																																																																																															1
AAATCA			1																																																																																																													1
AAATGC		1	1																																																																																																													2
AACAAA	1																																																																																																															1
AACACT										2																																																																																																						2
AACAGA											1																																																																																																					1
AACAGC	1																																																																																																															1
AACCAA	1																																																																																																															1
AACCAG	1																																																																																																															1
AACCTC	1																																																																																																															1
AACGAA		1																																																																																																														1
AACGAC	1																																																																																																															1
AACGCA	1																																																																																																															1
AACGCC	1																																																																																																															1
AACGGC	3																																																																																																															3
AACTCA		1																																																																																																														1
AACTGC	3																																																																																																															3
AAGAAA	10				1																																																																																																											11
AAGACA	1																																																																																																															1
AAGACG	3																																																																																																															3
AAGAGA		1																																																																																																														1
AAGAGG	1																																																																																																															1
AAGCAA	2																																																																																																															2
AAGCAG	1																																																																																																															1
AAGCTC	1																																																																																																															1
AAGGAA	2																																																																																																															2
AAGGAC	2																																																																																																															2
AAGGAG	2																																																																																																															2
AAGGCT	1																																																																																																															1
AAGGTC	1																																																																																																															1
AAGTCA		1																																																																																																														1
AATAAA	5																																																																																																															5
AATAGA	1																																																																																																															1
AATCAA	2			1																																																																																																												3
AATCGA	1																																																																																																															1
AATGAA	2	1																																																																																																														3
AATGAT		1																																																																																																														1
AATGCA	1																																																																																																															1
AATGCC	1																																																																																																															1
AATGCT	1																																																																																																															1
AATGGA	1																																																																																																															1
AATTAA	2																																																																																																															2
AATTGC	1																																																																																																															1
AATTTG	1																																																																																																															1
AATTTT	1																																																																																																															1
ACAAAA	2																																																																																																															2
ACAACG	1																																																																																																															1
ACAATG	1																																																																																																															1
ACACAG		1																																																																																																														1
ACACCC	1																																																																																																															1
ACAGAT	1																																																																																																															1
ACAGCA	3	1				1																																																																																																										5
ACAGGA	1																																																																																																															1
ACATAT	1																																																																																																															1
ACATCG	1	1																																																																																																														2
ACATTC	1																																																																																																															1
ACCACA		1		1																																																																																																												2
ACCACG		2	1																																																																																																													3
ACCAGA	1																																																																																																															1
ACCAGG	1																																																																																																															1
ACCGCA	1																																																																																																															1
ACCGGC	1																																																																																																															1
ACCGTT	1																																																																																																															1
ACCTGC	1																																																																																																															1
ACCTGG	1																																																																																																															1
ACGACA	3																																																																																																															3
ACGACC	2	1																																																																																																														3
ACGAGC	1																																																																																																															1
ACGCAG	2																																																																																																															2
ACGCGG	1																																																																																																															1
ACGGCA	2																																																																																																															2
ACGGGA	1																																																																																																															1
ACGGGG	1																																																																																																															1
ACGTCA	1																																																																																																															1
ACTAAC										1																																																																																																						1
ACTGAA	1																																																																																																															1
ACTGAC	1																																																																																																															1
ACTGAT	1																																																																																																															1
ACTGCC	1																																																																																																															1
ACTGCT	1																																																																																																															1
ACTTCC	1																																																																																																															1
ACTTGC	1																																																																																																															1
AGAAAA	9																																																																																																															9
AGAAAG	1																																																																																																															1
AGAAGG	2																																																																																																															2
AGACAC		1																																																																																																														1
AGACAG		1																																																																																																														1
AGACCA	1																																																																																																															1
AGACCC	1																																																																																																															1
AGACCG	1																																																																																																															1
AGACGA		1																																																																																																														1
AGACGC	1																																																																																																															1
AGACGG	1																																																																																																															1
AGAGCA	1																																																																																																															1
AGAGCC	2																																																																																																															2
AGAGGG	1																																																																																																															1
AGATGA	1																																																																																																															1
AGATGG	1																																																																																																															1
AGCAAG		1																																																																																																														1
AGCACA	1																																																																																																															1
AGCAGA	1																																																																																																															1
AGCAGG	3	1																																																																																																														4
AGCATC		1																																																																																																														1
AGCCAG	1	1																																																																																																														2
AGCCGC	1																																																																																																															1
AGCGAC	1																																																																																																															1
AGCGGC	1		1																																																																																																													2
AGCGTG	2																																																																																																															2
AGCTCC	2																																																																																																															2
AGCTCG	1																																																																																																															1
AGCTGG	1																																																																																																															1
AGCTTC	1																																																																																																															1
AGCTTG	1																																																																																																															1
AGGACC	1																																																																																																															1
AGGAGA	2																																																																																																															2
AGGAGC	1																																																																																																															1
AGGCCG	3																																																																																																															3
AGGCGG	1																																																																																																															1
AGGGAA	1																																																																																																															1
AGGGAG	1																																																																																																															1
AGGGCA	1																																																																																																															1
AGGTCG	1																																																																																																															1
AGGTGC	1																																																																																																															1
AGGTGG	1																																																																																																															1
AGGTTG	1																																																																																																															1
AGTCCC	1																																																																																																															1
AGTCGC		1																																																																																																														1
AGTCGT	3																																																																																																															3
AGTGCA	1																																																																																																															1
AGTGGA		1																																																																																																														1
AGTGGC	1		1																																																																																																													2
AGTGTT	1																																																																																																															1
AGTTGC	1																																																																																																															1
ATAAAA	3	1																																																																																																														4
ATAAAG	2																																																																																																															2
ATAAGC	1																																																																																																															1
ATAGCT	1																																																																																																															1
ATCAAA	1	1																																																																																																														2
ATCAGA	1																																																																																																															1
ATCCAC		1																																																																																																														1
ATCGTG	1																																																																																																															1
ATCTGG	1																																																																																																															1
ATGAAA	2																																																																																																															2
ATGAGC	1																																																																																																															1
ATGCAA	2	1																																																																																																														3
ATGCAG	1																																																																																																															1
ATGCTC	1																																																																																																															1
ATGGAC	1																																																																																																															1
ATGGAT	1																																																																																																															1
ATGGCG	1																																																																																																															1
ATGGTG	1																																																																																																															1
ATGTGG	1																																																																																																															1
ATTACA	1																																																																																																															1
ATTCTG	1																																																																																																															1
ATTGCC	1																																																																																																															1
ATTGGG	1																																																																																																															1
ATTTGA	1																																																																																																															1
ATTTTG	3	2																																																																																																														5
ATTTTT	6	1																																																																																																														7
CAAAAA	1																																																																																																															1
CAAAAC	1																																																																																																															1
CAAACA	1																																																																																																															1
CAAACG	1																																																																																																															1
CAAACT	1																																																																																																															1
CAAAGA	1																																																																																																															1
CAACAG	5	2																																																																																																														7
CAACAT	1																																																																																																															1
CAACCA	1																																																																																																															1
CAACGA	1	1																																																																																																														2
CAACGC	1																																																																																																															1
CAAGAC	2																																																																																																															2
CAAGCA	1																																																																																																															1
CAAGCT		1																																																																																																														1
CAAGGA	1																																																																																																															1
CAAGGC	2																																																																																																															2
CAATAT	1																																																																																																															1
CAATGA	1																																																																																																															1
CACAAA	1	1																																																																																																														2
CACAAC	3																																																																																																															3
CACACC	1																																																																																																															1
CACACT	1																																																																																																															1
CACATA	1																																																																																																															1
CACATC	1																																																																																																															1
CACCAA	1																																																																																																															1
CACCCA	1																																																																																																															1
CACCCT	1																																																																																																															1
CACGAC	1																																																																																																															1
CACGAT		1																																																																																																														1
CACGCC	1																																																																																																															1
CACGGC	1																																																																																																															1
CACGGT	1																																																																																																															1
CACTCA	1																																																																																																															1
CACTCC	1																																																																																																															1
CACTGA		1																																																																																																														1
CACTGC	1																																																																																																															1
CAGAAA	2																																																																																																															2
CAGAAG	1	1																																																																																																														2
CAGACG	1																																																																																																															1
CAGAGC	1																																																																																																															1
CAGAGG	1																																																																																																															1
CAGAGT	1																																																																																																															1
CAGATC	1																																																																																																															1
CAGCAA	10	2				1																																																																																																										13
CAGCAC	3																																																																																																															3
CAGCAT	1																																																																																																															1
CAGCCA			1																																																																																																													1
CAGCGA	1																																																																																																															1
CAGCGG	1																																																																																																															1
CAGCTC	3	1																																																																																																														4
CAGGAA	1																																																																																																															1
CAGGAC	1																																																																																																															1
CAGGCA	2																																																																																																															2
CAGGCC	1																																																																																																															1
CAGTAG	1																																																																																																															1
CAGTCA		1																																																																																																														1
CAGTCG	1																																																																																																															1
CAGTGC	1																																																																																																															1
CAGTGG	2																																																																																																															2
CAGTTG	1																																																																																																															1
CATATT	1																																																																																																															1
CATCCA		1																																																																																																														1
CATCGA	1																																																																																																															1
CATGTC	2																																																																																																															2
CATGTG	1																																																																																																															1
CATTGG	1																																																																																																															1
CATTTT	2																																																																																																															2
CCAAAA		1																																																																																																														1
CCAACG	1																																																																																																															1
CCACCT	2																																																																																																															2
CCACTC	1	1																																																																																																														2
CCACTG	1																																																																																																															1
CCAGAA	1																																																																																																															1
CCAGAC	1																																																																																																															1
CCAGAG	1																																																																																																															1
CCAGAT	1																																																																																																															1
CCAGCA	2	1																																																																																																														3
CCAGGC	1																																																																																																															1
CCAGGT		2																																																																																																														2
CCAGTT		1																																																																																																														1
CCATCA	1																																																																																																															1
CCATCT	1																																																																																																															1
CCATTG						1																																																																																																										1
CCCACT	1																																																																																																															1
CCCCTT	1																																																																																																															1
CCCGCG	1																																																																																																															1
CCCTCC	1																																																																																																															1
CCCTCG	1																																																																																																															1
CCGACA	1																																																																																																															1
CCGACG	1																																																																																																															1
CCGACT	1																																																																																																															1
CCGAGT	1																																																																																																															1
CCGCAC		1																																																																																																														1
CCGCCA	1																																																																																																															1
CCGCCT	2																																																																																																															2
CCGCTG		2																																																																																																														2
CCGGAA	1																																																																																																															1
CCGGAG	1																																																																																																															1
CCGGCA	2																																																																																																															2
CCGGCT	2																																																																																																															2
CCGGTG	1		1																																																																																																													2
CCGTAG	1																																																																																																															1
CCGTGT	1																																																																																																															1
CCTCCA		1																																																																																																														1
CCTCGG	1																																																																																																															1
CCTCTC		1																																																																																																														1
CCTGAT	1																																																																																																															1
CCTGCA	1		1																																																																																																													2
CCTGCG	1		1																																																																																																													2
CCTGCT	1																																																																																																															1
CCTTCA		1																																																																																																														1
CCTTCT	1	1																																																																																																														2
CCTTGC		1																																																																																																														1
CCTTGG	1																																																																																																															1
CCTTGT	1																																																																																																															1
CCTTTT	1																																																																																																															1
CGAACA	1																																																																																																															1
CGAAGA	1		1																																																																																																													2
CGAAGC	1	1																																																																																																														2
CGACAC	2																																																																																																															2
CGACAG	1	1																																																																																																														2
CGACAT	1																																																																																																															1
CGACCA	1																																																																																																															1
CGACCG	2																																																																																																															2
CGACCT	1																																																																																																															1
CGACGG	1																																																																																																															1
CGACTA	3																																																																																																															3
CGACTC	1																																																																																																															1
CGACTT	2																																																																																																															2
CGAGAT	1																																																																																																															1
CGAGGA	5																																																																																																															5
CGATAC		1																																																																																																														1
CGATCA			1																																																																																																													1
CGATGA	2																																																																																																															2
CGATGC		1																																																																																																														1
CGATGT	1																																																																																																															1
CGCACG	1																																																																																																															1
CGCAGA	1																																																																																																															1
CGCAGC	2																																																																																																															2
CGCCAA	1																																																																																																															1
CGCCCA		1																																																																																																														1
CGCCTG	1																																																																																																															1
CGCGAG	1																																																																																																															1
CGCTCA	1																																																																																																															1
CGCTGC	5																																																																																																															5
CGCTGG	1																																																																																																															1
CGCTGT	1																																																																																																															1
CGGAGC	1																																																																																																															1
CGGATG	1																																																																																																															1
CGGCAA	2																																																																																																															2
CGGCAT	2																																																																																																															2
CGGCCA		1																																																																																																														1
CGGCCC	1																																																																																																															1
CGGCGC	1																																																																																																															1
CGGCTC	1																																																																																																															1
CGGCTG	1																																																																																																															1
CGGGAA		1																																																																																																														1
CGGGAG	1																																																																																																															1
CGGGTA		1																																																																																																														1
CGGTCC	1																																																																																																															1
CGGTCG	2																																																																																																															2
CGGTGC	1																																																																																																															1
CGGTGT	1																																																																																																															1
CGGTTG	1																																																																																																															1
CGTAGT		1																																																																																																														1
CGTCCT	1																																																																																																															1
CGTCGG	2																																																																																																															2
CGTGAA	1																																																																																																															1
CGTGAC		1																																																																																																														1
CGTGAG	1	1																																																																																																														2
CGTGAT	1																																																																																																															1
CGTGTA	1																																																																																																															1
CGTTGC	2																																																																																																															2
CGTTGT	2																																																																																																															2
CGTTTG		1																																																																																																														1
CTAACA									1	1																																																																																																						2
CTACAA	1																																																																																																															1
CTATCT	1																																																																																																															1
CTCAAC				1																																																																																																												1
CTCACA		1																																																																																																														1
CTCACT		1																																																																																																														1
CTCAGG	1																																																																																																															1
CTCATG	1																																																																																																															1
CTCCAC	1																																																																																																															1
CTCCCG	1																																																																																																															1
CTCCGC	1																																																																																																															1
CTCGGA	1																																																																																																															1
CTCGTC	1																																																																																																															1
CTCGTG		1																																																																																																														1
CTCTCA	1																																																																																																															1
CTCTCC	1																																																																																																															1
CTCTCG	1																																																																																																															1
CTCTGG	1																																																																																																															1
CTCTTC	2																																																																																																															2
CTCTTT	1																																																																																																															1
CTGAGT	1	1																																																																																																														2
CTGCAC	2																																																																																																															2
CTGCAG	1																																																																																																															1
CTGCAT	3	1																																																																																																														4
CTGCCA	2																																																																																																															2
CTGCCG	2																																																																																																															2
CTGCCT		1																																																																																																														1
CTGCGA	1																																																																																																															1
CTGCGG	2																																																																																																															2
CTGCTA	1																																																																																																															1
CTGCTC	1																																																																																																															1
CTGCTT		1																																																																																																														1
CTGGCA	1	1																																																																																																														2
CTGGCC	1																																																																																																															1
CTGGCT	3			1																																																																																																												4
CTGGGA	1																																																																																																															1
CTGGGC	1																																																																																																															1
CTGGTT	2	1																																																																																																														3
CTGTAG	1																																																																																																															1
CTGTAT	1																																																																																																															1
CTGTCG		1																																																																																																														1
CTGTGA	1																																																																																																															1
CTGTGC			1																																																																																																													1
CTGTGT	1																																																																																																															1
CTGTTG	2	1																																																																																																														3
CTGTTT		1																																																																																																														1
CTTCAG	1																																																																																																															1
CTTCCA	1																																																																																																															1
CTTCGA	1																																																																																																															1
CTTCTA			1																																																																																																													1
CTTCTC	1																																																																																																															1
CTTCTG	2																																																																																																															2
CTTGAC	1																																																																																																															1
CTTGAG				1																																																																																																												1
CTTGCA	1																																																																																																															1
CTTGCC	1																																																																																																															1
CTTGGA	1																																																																																																															1
CTTGGC	1																																																																																																															1
CTTGGG	1																																																																																																															1
CTTGGT	1																																																																																																															1
CTTGTC	1																																																																																																															1
CTTGTG	1																																																																																																															1
CTTGTT	1																																																																																																															1
CTTTCT	1																																																																																																															1
CTTTTA	2																																																																																																															2
CTTTTC	1																																																																																																															1
CTTTTG	2																																																																																																															2
CTTTTT	4					1																																																																																																										5
GAAAAA	6	4																																																																																																														10
GAAAAG	1																																																																																																															1
GAAAAT			1																																																																																																													1
GAAACA	2																																																																																																															2
GAAATC	1																																																																																																															1
GAAATG	1																																																																																																															1
GAACCG	1																																																																																																															1
GAACTG	1																																																																																																															1
GAAGAC		1		1																																																																																																												2
GAAGAG	4	2																																																																																																														6
GAAGCA	1																																																																																																															1
GAAGGA	1																																																																																																															1
GAAGGT	1																																																																																																															1
GACAAA	1																																																																																																															1
GACAAC	1																																																																																																															1
GACAAG	2																																																																																																															2
GACAGT	1																																																																																																															1
GACATG	2																																																																																																															2
GACCAA		1																																																																																																														1
GACCCT	1																																																																																																															1
GACCTT	1																																																																																																															1
GACGAA	3																																																																																																															3
GACGAG	2	1																																																																																																														3
GACGAT	3																																																																																																															3
GACGGC	1																																																																																																															1
GACGTA		1																																																																																																														1
GACTCG	1																																																																																																															1
GACTGC	1																																																																																																															1
GACTGG	1																																																																																																															1
GACTTT	1																																																																																																															1
GAGAAA	2																																																																																																															2
GAGAAG	1																																																																																																															1
GAGACT	1	1																																																																																																														2
GAGAGG	1																																																																																																															1
GAGAGT	1																																																																																																															1
GAGCAA	1																																																																																																															1
GAGCAG	1																																																																																																															1
GAGCCA	1								1																																																																																																							2
GAGCCG		1																																																																																																														1
GAGCGT			1																																																																																																													1
GAGCTG	1																																																																																																															1
GAGGAC	3																																																																																																															3
GAGGCA			1																																																																																																													1
GAGGGC	1																																																																																																															1
GAGGGT	1																																																																																																															1
GAGTCT		1																																																																																																														1
GATATT	1																																																																																																															1
GATCAG	1																																																																																																															1
GATCGT	2																																																																																																															2
GATGAA	1																																																																																																															1
GATGAC	1																																																																																																															1
GATGCA	3	1																																																																																																														4
GATGTC	1																																																																																																															1
GATGTG	1																																																																																																															1
GATGTT	1																																																																																																															1
GATTGG	1																																																																																																															1
GATTTG	1																																																																																																															1
GATTTT	2																																																																																																															2
GCAAAC	1																																																																																																															1
GCAACA	5	1	1																																																																																																													7
GCAACG	1																																																																																																															1
GCAAGA	1																																																																																																															1
GCAAGG	1																																																																																																															1
GCACAA	1																																																																																																															1
GCACAC	1																																																																																																															1
GCACCA	2																																																																																																															2
GCACCC		1																																																																																																														1
GCACCG	1																																																																																																															1
GCACCT	1	1																																																																																																														2
GCACTG		1																																																																																																														1
GCACTT	1																																																																																																															1
GCAGAC		1																																																																																																														1
GCAGAT	2	1																																																																																																														3
GCAGCC	1																																																																																																															1
GCAGCG		1																																																																																																														1
GCAGGC	1																																																																																																															1
GCAGGT	1																																																																																																															1
GCAGTC	2	1																																																																																																														3
GCAGTG	1		1																																																																																																													2
GCAGTT	1																																																																																																															1
GCATCG			1																																																																																																													1
GCATGA	1																																																																																																															1
GCATGT	1																																																																																																															1
GCATTT	1																																																																																																															1
GCCAAC	1																																																																																																															1
GCCAAT	2																																																																																																															2
GCCACC	1																																																																																																															1
GCCACG	1																																																																																																															1
GCCAGA	2																																																																																																															2
GCCAGT	3	1																																																																																																														4
GCCATT	1																																																																																																															1
GCCCAT	1																																																																																																															1
GCCCTT	1																																																																																																															1
GCCGAA	1																																																																																																															1
GCCGAG	2																																																																																																															2
GCCGGA	1																																																																																																															1
GCCGGC	1																																																																																																															1
GCCGTA		1																																																																																																														1
GCCGTT	1																																																																																																															1
GCCTCC	1																																																																																																															1
GCCTCG	1																																																																																																															1
GCCTGA	2																																																																																																															2
GCCTTG	2																																																																																																															2
GCCTTT	1																																																																																																															1
GCGACG	2																																																																																																															2
GCGACT	1																																																																																																															1
GCGATA	1																																																																																																															1
GCGCCC	1																																																																																																															1
GCGCCG	1																																																																																																															1
GCGGAT	1																																																																																																															1
GCGGCA	3																																																																																																															3
GCGGCT	2	1																																																																																																														3
GCGGGA	1																																																																																																															1
GCGGTA	1																																																																																																															1
GCGGTG		1																																																																																																														1
GCGTGG	1																																																																																																															1
GCGTGT	1																																																																																																															1
GCTCAA		1	1																																																																																																													2
GCTCCA		1																																																																																																														1
GCTCCG	1																																																																																																															1
GCTCGG	1																																																																																																															1
GCTCTT	1																																																																																																															1
GCTGAA	2																																																																																																															2
GCTGAT	2																																																																																																															2
GCTGCC	8	1		1																																																																																																												10
GCTGCG	1																																																																																																															1
GCTGGC			1																																																																																																													1
GCTGGT	1																																																																																																															1
GCTGTC	2	1																																																																																																														3
GCTGTG	1																																																																																																															1
GCTGTT	3																																																																																																															3
GCTTCA	1																																																																																																															1
GCTTCC	1																																																																																																															1
GCTTCT	2		1																																																																																																													3
GCTTTG	1																																																																																																															1
GGAAAA	1																																																																																																															1
GGAAAT	1																																																																																																															1
GGAACT			1																																																																																																													1
GGAAGA		1																																																																																																														1
GGACAT		1																																																																																																														1
GGACGA	1																																																																																																															1
GGACTT	1																																																																																																															1
GGAGAA	1	1																																																																																																														2
GGAGAG	1																																																																																																															1
GGAGAT	1	1																																																																																																														2
GGAGGG	1																																																																																																															1
GGAGGT	1	1																																																																																																														2
GGATCT		1																																																																																																														1
GGATGA	1																																																																																																															1
GGATGC	1																																																																																																															1
GGCAAC	2	1																																																																																																														3
GGCAAG	1	1																																																																																																														2
GGCACA	1																																																																																																															1
GGCACT	1																																																																																																															1
GGCAGC	3																																																																																																															3
GGCATG	1																																																																																																															1
GGCCAG	1																																																																																																															1
GGCCAT	1																																																																																																															1
GGCCCT	1																																																																																																															1
GGCCGA	1																																																																																																															1
GGCCTG	1																																																																																																															1
GGCGAT	1																																																																																																															1
GGCGCC	1																																																																																																															1
GGCGCT	1																																																																																																															1
GGCGGT	1																																																																																																															1
GGCGTC	1																																																																																																															1
GGCGTT	3																																																																																																															3
GGCTCA	1																																																																																																															1
GGCTCC	4																																																																																																															4
GGCTCG	3																																																																																																															3
GGCTCT		1																																																																																																														1
GGCTGC	2																																																																																																															2
GGCTGT	1																																																																																																															1
GGGAGA	1																																																																																																															1
GGGCAG	1																																																																																																															1
GGGCAT	1																																																																																																															1
GGGCGT	1																																																																																																															1
GGGGAA	1																																																																																																															1
GGGTCT	1																																																																																																															1
GGGTGA	1																																																																																																															1
GGGTGC	1																																																																																																															1
GGTAGA	1																																																																																																															1
GGTCAC	1																																																																																																															1
GGTCCA	1																																																																																																															1
GGTCGA	1																																																																																																															1
GGTCGT	2																																																																																																															2
GGTCTT		1																																																																																																														1
GGTGCA		1																																																																																																														1
GGTGCC	1																																																																																																															1
GGTGCT	1																																																																																																															1
GGTGGA	1	1																																																																																																														2
GGTGTA	1																																																																																																															1
GGTGTC	1																																																																																																															1
GGTGTG	2																																																																																																															2
GGTGTT		1																																																																																																														1
GGTTCA	1																																																																																																															1
GTACAG	1																																																																																																															1
GTAGCC	1																																																																																																															1
GTAGGA				1																																																																																																												1
GTCAAG		1																																																																																																														1
GTCAGA	1																																																																																																															1
GTCCTC	1																																																																																																															1
GTCCTG	1																																																																																																															1
GTCGAA	1	1																																																																																																														2
GTCGAG	1																																																																																																															1
GTCGAT	3																																																																																																															3
GTCGCT	1																																																																																																															1
GTCGGA	1																																																																																																															1
GTCGTG	1																																																																																																															1
GTCGTT	3																																																																																																															3
GTCTAC		1																																																																																																														1
GTCTAG	1																																																																																																															1
GTCTGC	1																																																																																																															1
GTCTTT	1																																																																																																															1
GTGAAT	1																																																																																																															1
GTGATC	1																																																																																																															1
GTGCAG	1																																																																																																															1
GTGCCA		1																																																																																																														1
GTGCCG	1																																																																																																															1
GTGCTG		1																																																																																																														1
GTGCTT		1																																																																																																														1
GTGGAC	1																																																																																																															1
GTGGAG	1																																																																																																															1
GTGGAT	1																																																																																																															1
GTGGCC	1																																																																																																															1
GTGGCT	1																																																																																																															1
GTGGGG	1																																																																																																															1
GTGGTC		1																																																																																																														1
GTGGTT		1			1																																																																																																											2
GTGTAA	1																																																																																																															1
GTGTAT	1																																																																																																															1
GTGTCG	1																																																																																																															1
GTGTGG	1																																																																																																															1
GTGTTA										1																																																																																																						1
GTGTTG	1																																																																																																															1
GTGTTT		1																																																																																																														1
GTTACG	1																																																																																																															1
GTTCTG	1																																																																																																															1
GTTGAA	1																																																																																																															1
GTTGAG	1																																																																																																															1
GTTGAT	1	1																																																																																																														2
GTTGCA	2																																																																																																															2
GTTGCC	1																																																																																																															1
GTTGCT	1																																																																																																															1
GTTGGA	1																																																																																																															1
GTTGGC	1																																																																																																															1
GTTGTC	1																																																																																																															1
GTTGTG	2																																																																																																															2
GTTTCT	1																																																																																																															1
GTTTGC		1																																																																																																														1
GTTTGG		1																																																																																																														1
GTTTTT	1																																																																																																															1
TAAAAA	3																																																																																																															3
TAAAGT	1																																																																																																															1
TAAATA	1																																																																																																															1
TAACAC										1																																																																																																						1
TAACAT	1																																																																																																															1
TAATAG		1																																																																																																														1
TACACA	2																																																																																																															2
TAGTTG	1																																																																																																															1
TAGTTT	1																																																																																																															1
TATCAA	1																																																																																																															1
TATCAT	1																																																																																																															1
TATGTT	1																																																																																																															1
TATTGT		1																																																																																																														1
TATTTC	1																																																																																																															1
TATTTT	5																																																																																																															5
TCAAAA						1																																																																																																										1
TCAAAG	1																																																																																																															1
TCAACA	1																																																																																																															1
TCAACC	1																																																																																																															1
TCAACG	1																																																																																																															1
TCACCG	1																																																																																																															1
TCACGA	2																																																																																																															2
TCAGGC	1		1																																																																																																													2
TCATCG	2																																																																																																															2
TCATTC	2																																																																																																															2
TCATTT	1	1																																																																																																														2
TCCAAA		1																																																																																																														1
TCCACT	1																																																																																																															1
TCCAGC	1																																																																																																															1
TCCATC	1																																																																																																															1
TCCCGA					1																																																																																																											1
TCCCGC	2																																																																																																															2
TCCCGG	1																																																																																																															1
TCCCTC	1																																																																																																															1
TCCGAC		2																																																																																																														2
TCCTAT	1																																																																																																															1
TCCTCA	3																																																																																																															3
TCCTCG	2																																																																																																															2
TCCTCT	1																																																																																																															1
TCCTGT	1																																																																																																															1
TCCTTG	1																																																																																																															1
TCGAAA	1																																																																																																															1
TCGACA	1																																																																																																															1
TCGACC	1																																																																																																															1
TCGACT	1	1																																																																																																														2
TCGATT		1																																																																																																														1
TCGCCA	2																																																																																																															2
TCGCCC	3																																																																																																															3
TCGCGC	1																																																																																																															1
TCGCGG	1																																																																																																															1
TCGGCC	2																																																																																																															2
TCGGTC	1																																																																																																															1
TCGTAG	2																																																																																																															2
TCGTCA	2	1																																																																																																														3
TCGTCC	3	1	1																																																																																																													5
TCGTTG	1																																																																																																															1
TCTAAA			1																																																																																																													1
TCTCAC	1																																																																																																															1
TCTCAT	1																																																																																																															1
TCTCCT	1																																																																																																															1
TCTCGC	1																																																																																																															1
TCTCGG	1																																																																																																															1
TCTCTG	1																																																																																																															1
TCTCTT	2	1																																																																																																														3
TCTGAA	1																																																																																																															1
TCTGAT	1																																																																																																															1
TCTGCA	3																																																																																																															3
TCTGCC	1																																																																																																															1
TCTGCG	1																																																																																																															1
TCTGCT		1																																																																																																														1
TCTGGA	1																																																																																																															1
TCTGGC	2			1																																																																																																												3
TCTGGT	2																																																																																																															2
TCTGTA	1																																																																																																															1
TCTGTT	1																																																																																																															1
TCTTCA	1																																																																																																															1
TCTTTC	2																																																																																																															2
TCTTTT	11																																																																																																															11
TGAAAA		1																																																																																																														1
TGAAGG		1																																																																																																														1
TGAATT		1																																																																																																														1
TGACAG	1																																																																																																															1
TGACCA	1																																																																																																															1
TGACCC	2																																																																																																															2
TGACTG	1																																																																																																															1
TGAGAA	1																																																																																																															1
TGAGAC	1																																																																																																															1
TGAGAT	2																																																																																																															2
TGAGCT	1																																																																																																															1
TGAGGC	1																																																																																																															1
TGAGGG	1																																																																																																															1
TGATCC	1																																																																																																															1
TGATCG	1																																																																																																															1
TGATCT	1																																																																																																															1
TGATGT	1																																																																																																															1
TGCACT	1																																																																																																															1
TGCAGA	2																																																																																																															2
TGCAGC	2																																																																																																															2
TGCATT	1																																																																																																															1
TGCCCT	2																																																																																																															2
TGCCGA	1																																																																																																															1
TGCCGT		1																																																																																																														1
TGCCTT	1																																																																																																															1
TGCGCA	1																																																																																																															1
TGCGCT	1																																																																																																															1
TGCGGC	1																																																																																																															1
TGCGTC	1																																																																																																															1
TGCGTT	1																																																																																																															1
TGCTCG	1																																																																																																															1
TGCTGG	3																																																																																																															3
TGCTGT	8	3																																																																																																														11
TGCTTC	1																																																																																																															1
TGCTTG	1																																																																																																															1
TGGACA	1																																																																																																															1
TGGAGA	1																																																																																																															1
TGGATA	1																																																																																																															1
TGGATC	1																																																																																																															1
TGGCAG	2																																																																																																															2
TGGCCG	1																																																																																																															1
TGGCGG	1																																																																																																															1
TGGCTG	1																																																																																																															1
TGGGCA	2																																																																																																															2
TGGTAC		1																																																																																																														1
TGGTCG	2	1																																																																																																														3
TGGTCT	1																																																																																																															1
TGGTGA		1																																																																																																														1
TGGTGC	4																																																																																																															4
TGGTGT	1																																																																																																															1
TGGTTC		2																																																																																																														2
TGGTTG	1																																																																																																															1
TGTACC	1																																																																																																															1
TGTATG	2																																																																																																															2
TGTATT	1																																																																																																															1
TGTCCC	1																																																																																																															1
TGTCCT	1																																																																																																															1
TGTCGA	1																																																																																																															1
TGTCGT	4																																																																																																															4
TGTCTG	1																																																																																																															1
TGTGAA	1																																																																																																															1
TGTGAT		1																																																																																																														1
TGTGCC	1																																																																																																															1
TGTGGA		1																																																																																																														1
TGTGGT	1	1																																																																																																														2
TGTGTC	1																																																																																																															1
TGTGTT		1																																																																																																														1
TGTTAG	2							1	1	3																																																																																																						7
TGTTCC	2																																																																																																															2
TGTTGA	2																																																																																																															2
TGTTGC	10	1	1																																																																																																													12
TGTTTC	3	2																																																																																																														5
TGTTTT	1																																																																																																															1
TTATAA	1																																																																																																															1
TTATTT	4																																																																																																															4
TTCAGG	1																																																																																																															1
TTCATT	1																																																																																																															1
TTCCAC	2																																																																																																															2
TTCCCA	1																																																																																																															1
TTCGGC	1																																																																																																															1
TTCGTG	1																																																																																																															1
TTCTCC	2																																																																																																															2
TTCTTG										1																																																																																																						1
TTCTTT	4																																																																																																															4
TTGACA	1																																																																																																															1
TTGACC	1																																																																																																															1
TTGCAT	2																																																																																																															2
TTGCCA	1		1																																																																																																													2
TTGCCG	1																																																																																																															1
TTGCGA	1																																																																																																															1
TTGCTC	1																																																																																																															1
TTGCTG	1																																																																																																															1
TTGCTT	1																																																																																																															1
TTGGCT	1																																																																																																															1
TTGTCC	2																																																																																																															2
TTGTCG	2																																																																																																															2
TTGTGA	1																																																																																																															1
TTGTGC	1																																																																																																															1
TTGTGG	1	1																																																																																																														2
TTGTTA	1																																																																																																															1
TTGTTC	3																																																																																																															3
TTGTTT	1																																																																																																															1
TTTAAA	1																																																																																																															1
TTTATT	4	1																																																																																																														5
TTTCCC	1																																																																																																															1
TTTCGA	2																																																																																																															2
TTTCGT	1																																																																																																															1
TTTCTC	1																																																																																																															1
TTTCTG	1	1																																																																																																														2
TTTCTT	12																																																																																																															12
TTTGAC	1																																																																																																															1
TTTGAT	2	1																																																																																																														3
TTTGTG	1																																																																																																															1
TTTGTT	2																																																																																																															2
TTTTAA	1		1																																																																																																													2
TTTTAC	1																																																																																																															1
TTTTAT	6	2																																																																																																														8
TTTTCA	1																																																																																																															1
TTTTCC	2																																																																																																															2
TTTTCG	1																																																																																																															1
TTTTCT	19	2																																																																																																														21
TTTTGA	2																																																																																																															2
TTTTTA	10																																																																																																															10
TTTTTC	15	1																																																																																																														16
TTTTTG	2																																																																																																															2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	68	42	50	43	30	28	37	20	27	15	19	13	5	4	9	10	8	12	10	5	6	6	5	4	5	3	6	7	1	2	3		1	2	1	1	1	2				1			2		1			1	1	2	1	1		3	1									1																	1											1	528
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	3	14	5	7	2	2	1	3	3	1	2	1				4								1	1	1		1	1	1	1	2	2	1		3						2		1	1	1	2				1	2	1		4	1	2																																					91
AC/GT	-	-	-	157	64	55	42	15	16	8	2	6	4	2	1		3																																																																																															375
AG/CT	-	-	-	276	149	74	59	34	18	17	6	12	5	1	5	3	3		3							2		1																																																																																				668
AT/AT	-	-	-	52	25	20	8	9	4	1	4	3	1		1							1																																																																																										129
CG/CG	-	-	-	13	4		1																																																																																																									18
AAC/GTT	-	-	122	57	17	20	10	6	6	2	1	3			1			3		1																																																																																												249
AAG/CTT	-	-	187	62	29	14	5	2		2						1			1			1	2																																																																																									306
AAT/ATT	-	-	28	17	5	4			3				2						1		1		2																																																																																									63
ACC/GGT	-	-	106	43	18	2	1	1	1																																																																																																							172
ACG/CGT	-	-	140	51	12	8	5	2		1	1													1																																																																																								221
ACT/AGT	-	-	10	3		1																																																																																																										14
AGC/CTG	-	-	323	170	71	28	13	6	4	1																																																																																																						616
AGG/CCT	-	-	125	24	16	9	3																																																																																																									177
ATC/ATG	-	-	14	5	1			1																																																																																																								21
CCG/CGG	-	-	161	36	11	2	2	1																																																																																																								213
AAAC/GTTT	-	20	3	1																																																																																																												24
AAAG/CTTT	-	98	23	5	1	1			1					1																																																																																																		130
AAAT/ATTT	-	28	3	1																																																																																																												32
AACC/GGTT	-	4	1																																																																																																													5
AACG/CGTT	-	3	2																																																																																																													5
AAGC/CTTG	-	4							1																																																																																																							5
AAGG/CCTT	-	10	4																																																																																																													14
AATC/ATTG	-	1																																																																																																														1
AATG/ATTC	-	1																																																																																																														1
AATT/AATT	-	3																																																																																																														3
ACAG/CTGT	-	9	6	2																																																																																																												17
ACAT/ATGT	-	4	1		1		1																																																																																																									7
ACCC/GGGT	-	1																																																																																																														1
ACCG/CGGT	-	3																																																																																																														3
ACGC/CGTG	-	4	1																																																																																																													5
ACGG/CCGT	-	1																																																																																																														1
ACGT/ACGT	-	1																																																																																																														1
ACTC/AGTG	-	5		1	1																																																																																																											7
ACTG/AGTC	-	1	1	1																																																																																																												3
AGAT/ATCT	-	1																																																																																																														1
AGCC/CTGG	-	10	2	2																																																																																																												14
AGCG/CGCT	-	5																																																																																																														5
AGGC/CCTG	-	6	1		1	1																																																																																																										9
AGGG/CCCT	-	7	1																																																																																																													8
ATCC/ATGG	-	4		1																																																																																																												5
ATGC/ATGC	-	2																																																																																																														2
CCGG/CCGG	-	1																																																																																																														1
AAAAC/GTTTT	78	11	2		1																																																																																																											92
AAAAG/CTTTT	367	53	10		1																																																																																																											431
AAAAT/ATTTT	144	12	3						1		1																																																																																																					161
AAACC/GGTTT	10	2																																																																																																														12
AAACG/CGTTT	23	2	1																																																																																																													26
AAAGC/CTTTG	13	2	2	1																																																																																																												18
AAAGG/CCTTT	18	2	2																																																																																																													22
AAAGT/ACTTT	3																																																																																																															3
AAATC/ATTTG	10	5	3																																																																																																													18
AAATG/ATTTC	11	1	1																																																																																																													13
AAATT/AATTT	5																																																																																																															5
AACAC/GTGTT	10	2	1											1																																																																																																		14
AACAG/CTGTT	8																																																																																																															8
AACAT/ATGTT	2	1																																																																																																														3
AACCC/GGGTT	5																																																																																																															5
AACCG/CGGTT	1																																																																																																															1
AACGC/CGTTG	9	1																																																																																																														10
AACTC/AGTTG	2			1																																																																																																												3
AAGAC/CTTGT	21	2	1																																																																																																													24
AAGAG/CTCTT	53	3																																																																																																														56
AAGAT/ATCTT	2																																																																																																															2
AAGCC/CTTGG	7																																																																																																															7
AAGCG/CGCTT	2																																																																																																															2
AAGGC/CCTTG	14	3																																																																																																														17
AAGGG/CCCTT	10	4																																																																																																														14
AAGGT/ACCTT	1																																																																																																															1
AAGTC/ACTTG	5	1																																																																																																														6
AAGTG/ACTTC	6		1																																																																																																													7
AATAC/ATTGT	7	2																																																																																																														9
AATAG/ATTCT	2																																																																																																															2
AATAT/ATATT	3	1																																																																																																														4
AATCC/ATTGG	2	1																																																																																																														3
AATCG/ATTCG	2																																																																																																															2
AATCT/AGATT	3																																																																																																															3
AATGC/ATTGC	7																																																																																																															7
AATGG/ATTCC	2																																																																																																															2
AATGT/ACATT	2																																																																																																															2
AATTC/AATTG	2																																																																																																															2
ACACC/GGTGT	6	2	1																																																																																																													9
ACACG/CGTGT	9	2	3																																																																																																													14
ACAGC/CTGTG	14	4																																																																																																														18
ACAGG/CCTGT	5																																																																																																															5
ACAGT/ACTGT	1																																																																																																															1
ACATC/ATGTG	10	1		1																																																																																																												12
ACATG/ATGTC	3																																																																																																															3
ACCAG/CTGGT	9	1	1	1																																																																																																												12
ACCAT/ATGGT	3																																																																																																															3
ACCCC/GGGGT	1																																																																																																															1
ACCCT/AGGGT	1	1																																																																																																														2
ACCGC/CGGTG	2																																																																																																															2
ACCGT/ACGGT	1																																																																																																															1
ACCTC/AGGTG	9	3	1																																																																																																													13
ACCTG/AGGTC	1																																																																																																															1
ACGAG/CGTCT	14	1	1	1																																																																																																												17
ACGAT/ATCGT	3																																																																																																															3
ACGCC/CGTGG	1																																																																																																															1
ACGCG/CGCGT	3																																																																																																															3
ACGGC/CCGTG	4																																																																																																															4
ACGGG/CCCGT	1																																																																																																															1
ACGTC/ACGTG	3	1																																																																																																														4
ACTCG/AGTCG	7	1																																																																																																														8
ACTCT/AGAGT	1																																																																																																															1
ACTGC/AGTGC	7																																																																																																															7
ACTGG/AGTCC	3																																																																																																															3
AGAGC/CTCTG	2																																																																																																															2
AGAGG/CCTCT	20	4	1								1																																																																																																					26
AGATC/ATCTG	4																																																																																																															4
AGATG/ATCTC	10	1																																																																																																														11
AGCAT/ATGCT	2																																																																																																															2
AGCCC/CTGGG	11	3																																																																																																														14
AGCCG/CGGCT	1																																																																																																															1
AGCTC/AGCTG	3																																																																																																															3
AGGAT/ATCCT	1																																																																																																															1
AGGCC/CCTGG	32	1	1																																																																																																													34
AGGCG/CCTCG	6																																																																																																															6
AGGGC/CCCTG	4																																																																																																															4
AGGGG/CCCCT	12	1	1																																																																																																													14
ATATC/ATATG	2																																																																																																															2
ATCCC/ATGGG	5	2																																																																																																														7
ATCGC/ATGCG	14																																																																																																															14
ATGCC/ATGGC	7	1																																																																																																														8
CCGCG/CGCGG	7																																																																																																															7
AAAAAC/GTTTTT	20																																																																																																															20
AAAAAG/CTTTTT	123	13			1	1																																																																																																										138
AAAAAT/ATTTTT	62	8										1																																																																																																				71
AAAACC/GGTTTT	3	1																																																																																																														4
AAAACG/CGTTTT	3	1																																																																																																														4
AAAACT/AGTTTT	1																																																																																																															1
AAAAGC/CTTTTG	6																																																																																																															6
AAAAGG/CCTTTT	9																																																																																																															9
AAAAGT/ACTTTT	3																																																																																																															3
AAAATC/ATTTTG	15	5	1	1		1																																																																																																										23
AAAATG/ATTTTC	9	3	1																																																																																																													13
AAAATT/AATTTT	4		1																																																																																																													5
AAACAC/GTGTTT	4	3																																																																																																														7
AAACAG/CTGTTT	11	4									1																																																																																																					16
AAACAT/ATGTTT	1																																																																																																															1
AAACCC/GGGTTT		1																																																																																																														1
AAACGC/CGTTTG	4	2																																																																																																														6
AAACGG/CCGTTT	1																																																																																																															1
AAACTC/AGTTTG	1	1																																																																																																														2
AAACTG/AGTTTC	1																																																																																																															1
AAAGAC/CTTTGT	5																																																																																																															5
AAAGAG/CTCTTT	10	2																																																																																																														12
AAAGAT/ATCTTT	2																																																																																																															2
AAAGCC/CTTTGG	3																																																																																																															3
AAAGGC/CCTTTG	2																																																																																																															2
AAAGGG/CCCTTT	2																																																																																																															2
AAAGTC/ACTTTG	4	1																																																																																																														5
AAAGTT/AACTTT	1																																																																																																															1
AAATAC/ATTTGT	2																																																																																																															2
AAATAG/ATTTCT	2																																																																																																															2
AAATAT/ATATTT	1																																																																																																															1
AAATCC/ATTTGG	1	1																																																																																																														2
AAATCG/ATTTCG	5	1																																																																																																														6
AAATCT/AGATTT			1																																																																																																													1
AAATGC/ATTTGC	7	2	1																																																																																																													10
AAATGG/ATTTCC	3																																																																																																															3
AAATTC/AATTTG	2	1																																																																																																														3
AAATTT/AAATTT	1																																																																																																															1
AACAAG/CTTGTT	4									1																																																																																																						5
AACAAT/ATTGTT	1	1																																																																																																														2
AACACC/GGTGTT	3	1																																																																																																														4
AACACG/CGTGTT	2																																																																																																															2
AACACT/AGTGTT	3							1	2	9																																																																																																						15
AACAGC/CTGTTG	49	11	2			2																																																																																																										64
AACAGG/CCTGTT	5																																																																																																															5
AACATC/ATGTTG	7	1																																																																																																														8
AACATT/AATGTT	1																																																																																																															1
AACCAC/GGTTGT	9	4		1	1																																																																																																											15
AACCAG/CTGGTT	8	3																																																																																																														11
AACCGC/CGGTTG	2																																																																																																															2
AACCGG/CCGGTT	2																																																																																																															2
AACCGT/ACGGTT	1																																																																																																															1
AACCTC/AGGTTG	4			1																																																																																																												5
AACCTG/AGGTTC	2																																																																																																															2
AACGAC/CGTTGT	20	1																																																																																																														21
AACGCC/CGTTGG	9																																																																																																															9
AACGGC/CCGTTG	15	2																																																																																																														17
AACGGG/CCCGTT	1	1																																																																																																														2
AACGGT/ACCGTT	1																																																																																																															1
AACGTC/ACGTTG	2																																																																																																															2
AACGTG/ACGTTC	1																																																																																																															1
AACTAC/AGTTGT	2																																																																																																															2
AACTCC/AGTTGG	1																																																																																																															1
AACTGC/AGTTGC	8																																																																																																															8
AACTGG/AGTTCC	1	1	1																																																																																																													3
AACTTC/AAGTTG	1																																																																																																															1
AAGACC/CTTGGT	5	2																																																																																																														7
AAGACG/CGTCTT	7	2	1	1																																																																																																												11
AAGAGC/CTCTTG	5	1																																																																																																														6
AAGAGG/CCTCTT	8	3																																																																																																														11
AAGATC/ATCTTG	1																																																																																																															1
AAGATG/ATCTTC	3																																																																																																															3
AAGCAC/CTTGTG	6	1																																																																																																														7
AAGCAG/CTGCTT	9	3	1																																																																																																													13
AAGCAT/ATGCTT	1																																																																																																															1
AAGCCC/CTTGGG	1																																																																																																															1
AAGCCG/CGGCTT	3	1																																																																																																														4
AAGCGC/CGCTTG	1																																																																																																															1
AAGCGG/CCGCTT	1																																																																																																															1
AAGCTC/AGCTTG	3	2	1	1																																																																																																												7
AAGCTG/AGCTTC	5																																																																																																															5
AAGGAC/CCTTGT	11																																																																																																															11
AAGGAG/CCTTCT	14	2																																																																																																														16
AAGGCC/CCTTGG	6																																																																																																															6
AAGGCT/AGCCTT	1																																																																																																															1
AAGGGC/CCCTTG	7	2																																																																																																														9
AAGGGG/CCCCTT	2																																																																																																															2
AAGGTC/ACCTTG	4	1																																																																																																														5
AAGGTG/ACCTTC	1	2																																																																																																														3
AAGTAG/ACTTCT			1																																																																																																													1
AAGTCC/ACTTGG	2																																																																																																															2
AAGTCG/ACTTCG	5	2																																																																																																														7
AAGTGC/ACTTGC	5																																																																																																															5
AAGTGG/ACTTCC	5	1																																																																																																														6
AAGTGT/ACACTT	1																																																																																																															1
AATAGG/ATTCCT	1																																																																																																															1
AATAGT/ACTATT		1																																																																																																														1
AATATC/ATATTG	3																																																																																																															3
AATATG/ATATTC	1																																																																																																															1
AATCAC/ATTGTG	1	1																																																																																																														2
AATCAG/ATTCTG	3																																																																																																															3
AATCCC/ATTGGG	2																																																																																																															2
AATCGC/ATTGCG	1																																																																																																															1
AATCTC/AGATTG	2																																																																																																															2
AATCTG/AGATTC	1																																																																																																															1
AATGAC/ATTGTC	2																																																																																																															2
AATGAG/ATTCTC	4																																																																																																															4
AATGAT/ATCATT	1	1																																																																																																														2
AATGCC/ATTGGC	4																																																																																																															4
AATGCT/AGCATT	1																																																																																																															1
AATGGC/ATTGCC	3		1			1																																																																																																										5
AATGGG/ATTCCC	1																																																																																																															1
AATGTC/ACATTG	1																																																																																																															1
AATGTG/ACATTC	3																																																																																																															3
AATTAC/AATTGT	1																																																																																																															1
AATTAT/AATTAT	1																																																																																																															1
AATTGC/AATTGC	1																																																																																																															1
ACACAG/CTGTGT	3	2																																																																																																														5
ACACAT/ATGTGT	6																																																																																																															6
ACACCC/GGGTGT	6																																																																																																															6
ACACCG/CGGTGT	6																																																																																																															6
ACACCT/AGGTGT	1																																																																																																															1
ACACGC/CGTGTG	2																																																																																																															2
ACACGG/CCGTGT	1																																																																																																															1
ACACGT/ACGTGT	1																																																																																																															1
ACACTC/AGTGTG	2	1																																																																																																														3
ACACTG/AGTGTC	1	1																																																																																																														2
ACAGAG/CTCTGT	1	1																																																																																																														2
ACAGAT/ATCTGT	3																																																																																																															3
ACAGCC/CTGTGG	4		1																																																																																																													5
ACAGCG/CGCTGT	7	3																																																																																																														10
ACAGCT/AGCTGT	1																																																																																																															1
ACAGGC/CCTGTG	4		1																																																																																																													5
ACAGGG/CCCTGT	1																																																																																																															1
ACAGGT/ACCTGT	2																																																																																																															2
ACAGTC/ACTGTG	2	1																																																																																																														3
ACAGTG/ACTGTC	2																																																																																																															2
ACATAT/ATATGT	1																																																																																																															1
ACATCC/ATGTGG	4	3																																																																																																														7
ACATCG/ATGTCG	10	1																																																																																																														11
ACATGC/ATGTGC	2																																																																																																															2
ACATGG/ATGTCC	6	1																																																																																																														7
ACCACG/CGTGGT	9	5	1																																																																																																													15
ACCAGC/CTGGTG	16	2																																																																																																														18
ACCAGG/CCTGGT	4																																																																																																															4
ACCAGT/ACTGGT		1																																																																																																														1
ACCATC/ATGGTG	2	1																																																																																																														3
ACCATG/ATGGTC	1																																																																																																															1
ACCCAG/CTGGGT	3																																																																																																															3
ACCCCC/GGGGGT	1																																																																																																															1
ACCCGC/CGGGTG	1	2																																																																																																														3
ACCCGT/ACGGGT		1																																																																																																														1
ACCCTC/AGGGTG	4																																																																																																															4
ACCCTG/AGGGTC	3																																																																																																															3
ACCGAG/CGGTCT	3																																																																																																															3
ACCGAT/ATCGGT		1																																																																																																														1
ACCGCC/CGGTGG	4	1																																																																																																														5
ACCGCG/CGCGGT	5																																																																																																															5
ACCGCT/AGCGGT	1																																																																																																															1
ACCGGC/CCGGTG	8		1																																																																																																													9
ACCGGG/CCCGGT	2																																																																																																															2
ACCGTC/ACGGTG	1																																																																																																															1
ACCGTG/ACGGTC	2	1																																																																																																														3
ACCTAG/AGGTCT	1																																																																																																															1
ACCTCC/AGGTGG	7	3																																																																																																														10
ACCTCG/AGGTCG	5																																																																																																															5
ACCTCT/AGAGGT	1																																																																																																															1
ACCTGC/AGGTGC	8	2	1																																																																																																													11
ACCTGG/AGGTCC	2	2																																																																																																														4
ACGACT/AGTCGT	8	1																																																																																																														9
ACGAGC/CGTGCT	2	1																																																																																																														3
ACGAGG/CCTCGT	19	2	1																																																																																																													22
ACGATC/ATCGTG	8	1	1																																																																																																													10
ACGATG/ATCGTC	10	1																																																																																																														11
ACGCAG/CGTCTG	8	1																																																																																																														9
ACGCCC/CGTGGG	3	1																																																																																																														4
ACGCCG/CGGCGT	4																																																																																																															4
ACGCGC/CGCGTG	1																																																																																																															1
ACGCGG/CCGCGT	1																																																																																																															1
ACGCTC/AGCGTG	4	1	1																																																																																																													6
ACGGAG/CCGTCT	1																																																																																																															1
ACGGCC/CCGTGG	4	1																																																																																																														5
ACGGCG/CCGTCG	4																																																																																																															4
ACGGCT/AGCCGT	2	1																																																																																																														3
ACGGGG/CCCCGT	1																																																																																																															1
ACGTAG/ACGTCT		2																																																																																																														2
ACGTCC/ACGTGG	1																																																																																																															1
ACTCAG/AGTCTG	1	2																																																																																																														3
ACTCCC/AGTGGG	3	1																																																																																																														4
ACTCCG/AGTCGG	3	2																																																																																																														5
ACTCCT/AGGAGT				1																																																																																																												1
ACTCGG/AGTCCG	3																																																																																																															3
ACTCTC/AGAGTG	3	1																																																																																																														4
ACTCTG/AGAGTC	2																																																																																																															2
ACTGAG/AGTCTC	2	1																																																																																																														3
ACTGAT/AGTATC	1																																																																																																															1
ACTGCC/AGTGGC	11		2																																																																																																													13
ACTGCG/AGTCGC	6	2																																																																																																														8
ACTGCT/AGCAGT	3																																																																																																															3
ACTGGC/AGTGCC	6	4																																																																																																														10
ACTGGG/AGTCCC	3																																																																																																															3
AGAGAT/ATCTCT	1																																																																																																															1
AGAGCC/CTCTGG	14	2		2					1																																																																																																							19
AGAGCG/CGCTCT	2																																																																																																															2
AGAGGC/CCTCTG	2	1	1																																																																																																													4
AGAGGG/CCCTCT	7	1																																																																																																														8
AGATCC/ATCTGG	5	1																																																																																																														6
AGATCG/ATCTCG	1																																																																																																															1
AGATGC/ATCTGC	14	3																																																																																																														17
AGATGG/ATCTCC	5	1																																																																																																														6
AGCAGG/CCTGCT	7	1																																																																																																														8
AGCATC/ATGCTG	3	1																																																																																																														4
AGCATG/ATGCTC	4																																																																																																															4
AGCCCG/CGGGCT	4																																																																																																															4
AGCCGC/CGGCTG	13	1																																																																																																														14
AGCCGG/CCGGCT	11	1																																																																																																														12
AGCCTC/AGGCTG	1																																																																																																															1
AGCCTG/AGGCTC	5		1																																																																																																													6
AGCGAT/ATCGCT	1																																																																																																															1
AGCGCC/CGCTGG	2		1																																																																																																													3
AGCGCG/CGCGCT	2																																																																																																															2
AGCGGC/CCGCTG	23	4	1	1																																																																																																												29
AGCGGG/CCCGCT	5																																																																																																															5
AGCTAT/AGCTAT	1																																																																																																															1
AGCTCC/AGCTGG	8	2																																																																																																														10
AGCTCG/AGCTCG	1																																																																																																															1
AGCTGC/AGCTGC	3																																																																																																															3
AGGATC/ATCCTG	3																																																																																																															3
AGGATG/ATCCTC	4																																																																																																															4
AGGCCC/CCTGGG	4																																																																																																															4
AGGCCG/CCTCGG	10																																																																																																															10
AGGCGC/CCTGCG	3		1																																																																																																													4
AGGCGG/CCGCCT	5																																																																																																															5
AGGGCC/CCCTGG	3																																																																																																															3
AGGGCG/CCCTCG	5																																																																																																															5
AGGGGC/CCCCTG	1																																																																																																															1
AGGGGG/CCCCCT	2																																																																																																															2
ATATCC/ATATGG	2																																																																																																															2
ATCCCG/ATCGGG					1																																																																																																											1
ATCCGC/ATGCGG	3																																																																																																															3
ATCGCC/ATGGCG	4																																																																																																															4
ATCGGC/ATGCCG	3	1	1																																																																																																													5
ATGCCC/ATGGGC	5																																																																																																															5
ATGCGC/ATGCGC	1																																																																																																															1
ATGGCC/ATGGCC	1																																																																																																															1
CCCCGG/CCGGGG	1																																																																																																															1
CCCGCG/CGCGGG	2																																																																																																															2
CCGGCG/CCGGCG	4																																																																																																															4
