Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018247375.1/fasta/hub_GCA_018247375.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              170288
Total size of examined sequences (bp):           52369862
Total number of identified SSRs:                 5557
Number of SSR containing sequences:              5006
Number of sequences containing more than 1 SSR:  408
Number of SSRs present in compound formation:    424


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	217
2	1910
3	474
4	849
5	1841
6	266

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	7	11	6	1	5	2	4	1				1		1	1	2			1																																				1																									53
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1	2	1		3	1	1	2		1	1		2					1			2			3	1																																																							23
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	5	2		3	5	2	4	4	1	4		2				1	2	1	1	1	2	1			1			1			3	3			1																																													58
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	10	11	2	2	4	2	2	7	2	4	1	1	2	1		2		1	1			2	1	2	1		2		2		2						1	1																	1	1		1																					1	83
AC	-	-	-	60	20	19	10	7	3	1	1						1																																																																																	122
AG	-	-	-	44	17	8	3	1				1																							1																																																															75
AT	-	-	-	193	103	74	55	43	38	14	12	10	5	3	2	2	1			2	1																																																																													558
CA	-	-	-	37	10	8	7	3	1	1	2		1	2		1																										1																																																								74
CG	-	-	-	1																																																																																														1
CT	-	-	-	38	16	5	3	1	1	1																																																																																								65
GA	-	-	-	27	10	4	4	1	2	1																																																																																								49
GC	-	-	-	18																																																																																														18
GT	-	-	-	35	17	17	9	7	5	3			1		1																																																																																			95
TA	-	-	-	221	103	74	66	39	31	17	13	8	7	7	3	3	4	2	1		2	1																																																																												602
TC	-	-	-	60	21	12	4	3	1	1		1																																																																																						103
TG	-	-	-	55	37	25	12	9	4	3	1		2																																																																																					148
AAC	-	-	5	1																																																																																														6
AAG	-	-	12	3																																																																																														15
AAT	-	-	30	4	2																																																																																													36
ACA	-	-	3		1																																																																																													4
ACC	-	-			1																																																																																													1
ACT	-	-	3	2																																																																																														5
AGA	-	-	6	2																																																																																														8
AGC	-	-	4																																																																																															4
AGT	-	-	6	2	1																																																																																													9
ATA	-	-	29	8	2	2		1			1																																																																																							43
ATC	-	-	5	1	1																																																																																													7
ATG	-	-	9	1																																																																																														10
ATT	-	-	32	13	2	1		1																																																																																										49
CAA	-	-	2																																																																																															2
CAG	-	-	1																																																																																															1
CAT	-	-	2	3																																																																																														5
CCA	-	-	1																																																																																															1
CCG	-	-	1																																																																																															1
CCT	-	-		1		1																																																																																												2
CGC	-	-	2																																																																																															2
CGG	-	-	2		1																																																																																													3
CTA	-	-	6	1																																																																																														7
CTC	-	-			1																																																																																													1
CTG	-	-	1																																																																																															1
CTT	-	-	14	1																																																																																														15
GAA	-	-	6	2																																																																																														8
GAC	-	-				1																																																																																												1
GAG	-	-	2																																																																																															2
GAT	-	-	4	2																																																																																														6
GCC	-	-	1																																																																																															1
GCG	-	-	3																																																																																															3
GCT	-	-	1																																																																																															1
GGA	-	-		1	1																																																																																													2
GGC	-	-	1	1																																																																																														2
GTA	-	-	4		1																																																																																													5
GTG	-	-	3																																																																																															3
GTT	-	-	5																																																																																															5
TAA	-	-	26	6	2	2																																																																																												36
TAC	-	-	6	2																																																																																														8
TAG	-	-	11	1	1																																																																																													13
TAT	-	-	23	6	1																																																																																													30
TCA	-	-	8	3	1																																																																																													12
TCG	-	-	1																																																																																															1
TCT	-	-	11	2	1																																																																																													14
TGA	-	-	7																																																																																															7
TGC	-	-	2																																																																																															2
TGG	-	-	1	1																																																																																														2
TTA	-	-	36	10	2				1																																																																																									49
TTC	-	-	15	2																																																																																														17
TTG	-	-	4	2																																																																																														6
AAAC	-	7	1																																																																																															8
AAAG	-	3																																																																																																3
AAAT	-	26	5	1																																																																																														32
AACA	-	3																																																																																																3
AACT	-				1																																																																																													1
AAGA	-	9		1																																																																																														10
AAGC	-		1																																																																																															1
AAGT	-	2																																																																																																2
AATA	-	18	6	2				1																																																																																										27
AATC	-	2																																																																																																2
AATG	-	5																																																																																																5
AATT	-	7																																																																																																7
ACAA	-	9			1																																																																																													10
ACAG	-	3	3				1	1																																																																																										8
ACAT	-	9	5																																																																																															14
ACTT	-	3																																																																																																3
AGAA	-	12	4	1			2																																																																																											19
AGAC	-	11	1																																																																																															12
AGAT	-	6																																																																																																6
AGCG	-	1																																																																																																1
AGCT	-	2																																																																																																2
AGGA	-	1																																																																																																1
AGTA	-	1																																																																																																1
AGTC	-	2	1																																																																																															3
AGTT	-	4																																																																																																4
ATAA	-	23	2																																																																																															25
ATAC	-	10	4																																																																																															14
ATAG	-	6	1				1																																																																																											8
ATCA	-	2																																																																																																2
ATCC	-	3																																																																																																3
ATCG	-	1																																																																																																1
ATCT	-	5	1																																																																																															6
ATGA	-	4	4																																																																																															8
ATGG	-	1																																																																																																1
ATGT	-	2		1	1		1																																																																																											5
ATTA	-	5		2																																																																																														7
ATTC	-	4																																																																																																4
ATTG	-	4																																																																																																4
ATTT	-	13	1																																																																																															14
CAAA	-	10																																																																																																10
CAAC	-	1																																																																																																1
CAAT	-	3	2																																																																																															5
CACG	-	1																																																																																																1
CAGA	-	1		1																																																																																														2
CATA	-	5	3																																																																																															8
CATC	-	1																																																																																																1
CATT	-	1																																																																																																1
CCTC	-	1																																																																																																1
CCTG	-					1																																																																																												1
CCTT	-	1																																																																																																1
CGGA	-	1																																																																																																1
CGGT	-	1		1																																																																																														2
CGTA	-	1																																																																																																1
CTAA	-	1																																																																																																1
CTAT	-	3																																																																																																3
CTGT	-	3																																																																																																3
CTTA	-	2																																																																																																2
CTTC	-	1																																																																																																1
CTTT	-	6																																																																																																6
GAAA	-	6	3	1	1																																																																																													11
GAAG	-	1																																																																																																1
GAAT	-	3																																																																																																3
GACA	-	10	2	2																																																																																														14
GACG	-	3	1																																																																																															4
GAGG	-	1																																																																																																1
GATA	-	2	1																																																																																															3
GATG	-	3																																																																																																3
GATT	-	4																																																																																																4
GCAA	-	1																																																																																																1
GCAC	-	1																																																																																																1
GCTT	-	1																																																																																																1
GGAC	-	1																																																																																																1
GTAA	-	2	1																																																																																															3
GTAG	-	1	1																																																																																															2
GTAT	-	4	1																																																																																															5
GTCC	-	2	3		1																																																																																													6
GTCG	-	1																																																																																																1
GTCT	-	9	2																																																																																															11
GTGC	-	1																																																																																																1
GTTA	-	1																																																																																																1
GTTG	-	1																																																																																																1
GTTT	-	6	1				1																																																																																											8
TAAA	-	41	8																																																																																															49
TAAC	-	2																																																																																																2
TAAG	-	5																																																																																																5
TAAT	-	3		1																																																																																														4
TACA	-	10	2																																																																																															12
TACC	-	2																																																																																																2
TACG	-	1																																																																																																1
TACT	-	2																																																																																																2
TAGA	-	5	3																																																																																															8
TAGC	-	1																																																																																																1
TAGG	-	2																																																																																																2
TAGT	-	7	2																																																																																															9
TATC	-	4	3																																																																																															7
TATG	-	17	4		1																																																																																													22
TATT	-	21	8	1	1																																																																																													31
TCAC	-	1																																																																																																1
TCAT	-	2																																																																																																2
TCCA	-	1																																																																																																1
TCGA	-	1																																																																																																1
TCTA	-	2																																																																																																2
TCTG	-	11	3	1																																																																																														15
TCTT	-	2																																																																																																2
TGAA	-	4																																																																																																4
TGAC	-	1	1	1																																																																																														3
TGAT	-	5																																																																																																5
TGGA	-	4																																																																																																4
TGTA	-	14	7	5																																																																																														26
TGTC	-	3	3		1	1																																																																																												8
TGTT	-	5	3																																																																																															8
TTAA	-	5																																																																																																5
TTAG	-		1																																																																																															1
TTAT	-	25	4	1																																																																																														30
TTCA	-	4	1	1							1																																																																																							7
TTCG	-		1																																																																																															1
TTCT	-	2	2																																																																																															4
TTGA	-	4																																																																																																4
TTGG	-	1																																																																																																1
TTGT	-	7																																																																																																7
TTTA	-	48	6	1																																																																																														55
TTTC	-	32	18	4																																																																																														54
TTTG	-	13	2																																																																																															15
AAAAC	4																																																																																																	4
AAAAG	3																																																																																																	3
AAAAT	21	2					1																																																																																											24
AAACA	4																																																																																																	4
AAACG	2																																																																																																	2
AAACT	5																																																																																																	5
AAAGA	3																																																																																																	3
AAAGT	2																																																																																																	2
AAATA	25	1																																																																																																26
AAATC	3																																																																																																	3
AAATG	6	1																																																																																																7
AAATT	19		1																																																																																															20
AACAA	2																																																																																																	2
AACAC	1																																																																																																	1
AACAG	1																																																																																																	1
AACAT	1																																																																																																	1
AACCA	2																																																																																																	2
AACCT	13	4	5	1	2	1				1			1																																																																																					28
AACGT	3																																																																																																	3
AACTA	4																																																																																																	4
AACTC	2	1																																																																																																3
AACTG	1																																																																																																	1
AAGAA	4																																																																																																	4
AAGAC	1																																																																																																	1
AAGAT	2																																																																																																	2
AAGCG	2																																																																																																	2
AAGGA	1																																																																																																	1
AAGGC	2																																																																																																	2
AAGGT	1																																																																																																	1
AAGTA	1																																																																																																	1
AAGTC	1																																																																																																	1
AAGTG	2																																																																																																	2
AAGTT	3																																																																																																	3
AATAA	24	1																																																																																																25
AATAC	7																																																																																																	7
AATAG	2																																																																																																	2
AATAT	13																																																																																																	13
AATCA	3																																																																																																	3
AATCC	1																																																																																																	1
AATCG	3																																																																																																	3
AATCT	1																																																																																																	1
AATGA	4	3																																																																																																7
AATGC	1																																																																																																	1
AATGG	2		2																																																																																															4
AATGT	1																																																																																																	1
AATTA	13	1																																																																																																14
AATTC	38	1																																																																																																39
AATTG	6																																																																																																	6
AATTT	23																																																																																																	23
ACAAA	3																																																																																																	3
ACAAG	1																																																																																																	1
ACAAT	5																																																																																																	5
ACACT		1																																																																																																1
ACAGC	1																																																																																																	1
ACAGT	3																																																																																																	3
ACATT	3																																																																																																	3
ACCCC	1																																																																																																	1
ACCGA	1	1																																																																																																2
ACCTA	15	11	1	5	3	2	2	1	1																																																																																									41
ACCTC	1																																																																																																	1
ACCTT	5																																																																																																	5
ACGAA	1																																																																																																	1
ACGAC	1		1																																																																																															2
ACGAT	1																																																																																																	1
ACGCA	2																																																																																																	2
ACGGG	4	1																																																																																																5
ACGTC	1																																																																																																	1
ACGTT	6																																																																																																	6
ACTAA	3																																																																																																	3
ACTAC	1																																																																																																	1
ACTAT	1	1																																																																																																2
ACTCA	2																																																																																																	2
ACTCT	2																																																																																																	2
ACTTA	1																																																																																																	1
ACTTT	1																																																																																																	1
AGAAA	4																																																																																																	4
AGAGG	1																																																																																																	1
AGATA	1																																																																																																	1
AGATC	1																																																																																																	1
AGCTA	3																																																																																																	3
AGCTT	1																																																																																																	1
AGGAA	1																																																																																																	1
AGGGA	1																																																																																																	1
AGGTT	11	4		2	1			1				2																																																																																						21
AGTAA	1																																																																																																	1
AGTAC	1																																																																																																	1
AGTAT	3																																																																																																	3
AGTCA	2																																																																																																	2
AGTCC	1																																																																																																	1
AGTTA	1																																																																																																	1
AGTTC	2																																																																																																	2
AGTTG	1																																																																																																	1
AGTTT	5																																																																																																	5
ATAAA	15																																																																																																	15
ATAAC	1																																																																																																	1
ATAAG	2																																																																																																	2
ATAAT	12																																																																																																	12
ATACA	6	3																																																																																																9
ATACC	1																																																																																																	1
ATACT	2																																																																																																	2
ATAGA	1	1																																																																																																2
ATAGG	3																																																																																																	3
ATAGT	1																																																																																																	1
ATATA	14																																																																																																	14
ATATC	1																																																																																																	1
ATATG	1																																																																																																	1
ATATT	13		1																																																																																															14
ATCAA	3																																																																																																	3
ATCAC	1																																																																																																	1
ATCAG	1																																																																																																	1
ATCAT	2	1																																																																																																3
ATCCA	2																																																																																																	2
ATCCT	1																																																																																																	1
ATCGA	1																																																																																																	1
ATCGG	1																																																																																																	1
ATCTA	1																																																																																																	1
ATGAA	6	1																																																																																																7
ATGAC	1																																																																																																	1
ATGAT	2																																																																																																	2
ATGCC	5			1																																																																																														6
ATGCG	1																																																																																																	1
ATGCT	1																																																																																																	1
ATGGC	6																																																																																																	6
ATGGT	1																																																																																																	1
ATGTC	2																																																																																																	2
ATGTG	1																																																																																																	1
ATGTT	1																																																																																																	1
ATTAA	6																																																																																																	6
ATTAC	2	1																																																																																																3
ATTAG	5																																																																																																	5
ATTAT	5																																																																																																	5
ATTCA	8																																																																																																	8
ATTCC	4	1																																																																																																5
ATTCG	2																																																																																																	2
ATTCT	3																																																																																																	3
ATTGA	3	1																																																																																																4
ATTGG	3																																																																																																	3
ATTGT		1																																																																																																1
ATTTA	12																																																																																																	12
ATTTC	7	3	1			1																																																																																												12
ATTTG	9		1																																																																																															10
ATTTT	25																																																																																																	25
CAAAA	1																																																																																																	1
CAAAG	1																																																																																																	1
CAAAT	3																																																																																																	3
CAACT	1																																																																																																	1
CAAGC	1																																																																																																	1
CAATA	1	1																																																																																																2
CAATC	1																																																																																																	1
CAATG	3																																																																																																	3
CAATT	2																																																																																																	2
CACAA	1																																																																																																	1
CACAG	1																																																																																																	1
CACAT	2																																																																																																	2
CACGA	2	1																																																																																																3
CACGT	1																																																																																																	1
CACTA	1																																																																																																	1
CAGTA	1	1																																																																																																2
CAGTT	2																																																																																																	2
CATAA	1																																																																																																	1
CATAG	2																																																																																																	2
CATCA	1																																																																																																	1
CATCT	1																																																																																																	1
CATGA	1																																																																																																	1
CATGT	1		1																																																																																															2
CATTC	2	2	1	1																																																																																														6
CATTT	6																																																																																																	6
CCAAC	1																																																																																																	1
CCAGA	1																																																																																																	1
CCAGT	1																																																																																																	1
CCATG	1																																																																																																	1
CCATT	2			2																																																																																														4
CCCGT	1	2																																																																																																3
CCCTC	1																																																																																																	1
CCGAA	1																																																																																																	1
CCGTA	1																																																																																																	1
CCGTC	7	1																																																																																																8
CCTAA	4	3	1			2	2		2	1	1		2																																																																																					18
CCTAT	1																																																																																																	1
CCTGG		1																																																																																																1
CCTTC	1																																																																																																	1
CGAAA	1																																																																																																	1
CGAAC	1																																																																																																	1
CGAAT	2																																																																																																	2
CGACG	1																																																																																																	1
CGATT	2																																																																																																	2
CGCAA	1																																																																																																	1
CGCCG	1	1																																																																																																2
CGGCG	1																																																																																																	1
CGGGA	1																																																																																																	1
CGTAA	1																																																																																																	1
CGTCC	5																																																																																																	5
CGTCT	1																																																																																																	1
CGTGA	1																																																																																																	1
CTAAA	1																																																																																																	1
CTAAC	17	10	6	5	1		1	1	1	1																																																																																								43
CTAAG	1																																																																																																	1
CTAAT	1																																																																																																	1
CTATA	1																																																																																																	1
CTATG	1																																																																																																	1
CTATT	2	1																																																																																																3
CTCAA	1																																																																																																	1
CTCAC	1																																																																																																	1
CTCAT	1																																																																																																	1
CTCTC	1																																																																																																	1
CTGAA	1																																																																																																	1
CTGAT	2																																																																																																	2
CTGCT	1																																																																																																	1
CTTAA	2																																																																																																	2
CTTCC	1																																																																																																	1
CTTCG	1																																																																																																	1
CTTCT	1																																																																																																	1
CTTTA	3																																																																																																	3
CTTTC	1																																																																																																	1
CTTTT	2																																																																																																	2
GAAAA	8																																																																																																	8
GAAAG	1	1																																																																																																2
GAAAT	7																																																																																																	7
GAACA	2																																																																																																	2
GAACT					1																																																																																													1
GAAGC	1																																																																																																	1
GAATA	2																																																																																																	2
GAATC	1																																																																																																	1
GAATG		1																																																																																																1
GAATT	8																																																																																																	8
GACAA	2																																																																																																	2
GACAC	1																																																																																																	1
GACAG	1																																																																																																	1
GACCA	1																																																																																																	1
GACGA	1																																																																																																	1
GACGG	5	1		1																																																																																														7
GACTT	1																																																																																																	1
GAGTA	1																																																																																																	1
GAGTG	1																																																																																																	1
GATAA	2																																																																																																	2
GATAT	2																																																																																																	2
GATCA	1																																																																																																	1
GATCT	3																																																																																																	3
GATGA	1																																																																																																	1
GATTC	4																																																																																																	4
GATTT	4																																																																																																	4
GCAAA	1																																																																																																	1
GCAAT	1																																																																																																	1
GCATG	1																																																																																																	1
GCATT	1																																																																																																	1
GCCAA	1																																																																																																	1
GCCAC	1																																																																																																	1
GCCCC	1																																																																																																	1
GCCGC	3																																																																																																	3
GCGCG	1																																																																																																	1
GCGTC	1																																																																																																	1
GCTCC	2																																																																																																	2
GCTCG	1																																																																																																	1
GCTGG		1																																																																																																1
GCTGT	1																																																																																																	1
GCTTA	1																																																																																																	1
GCTTC	1																																																																																																	1
GGAAC	1																																																																																																	1
GGAAT	2	6		3																																																																																														11
GGACA	2																																																																																																	2
GGACG	6	1																																																																																																7
GGAGT	1																																																																																																	1
GGATA	2																																																																																																	2
GGATC	1																																																																																																	1
GGATG	1																																																																																																	1
GGCGC	2																																																																																																	2
GGCGT	1																																																																																																	1
GGGAC	2																																																																																																	2
GGGCT	2																																																																																																	2
GGGTG	1																																																																																																	1
GGTAA		1																																																																																																1
GGTCT	1																																																																																																	1
GGTTA	12	3	3	1				2			1	1	1																																																																																					24
GGTTC	1																																																																																																	1
GTAAA	3																																																																																																	3
GTAAC	1																																																																																																	1
GTAAG	2																																																																																																	2
GTAAT	1	1																																																																																																2
GTACA	1																																																																																																	1
GTACT	2																																																																																																	2
GTAGT	3																																																																																																	3
GTATA	1																																																																																																	1
GTATC	1																																																																																																	1
GTATT	4																																																																																																	4
GTCAC	2																																																																																																	2
GTCCC	4																																																																																																	4
GTCCT	2																																																																																																	2
GTCGT	1																																																																																																	1
GTCTA	2																																																																																																	2
GTGAA	1																																																																																																	1
GTGCA	1																																																																																																	1
GTGTA	1																																																																																																	1
GTGTT	1																																																																																																	1
GTTAA	3																																																																																																	3
GTTAC	2																																																																																																	2
GTTAG	10	4	3	4	3	1	2	2		1		1																																																																																						31
GTTCA	2																																																																																																	2
GTTCG	3																																																																																																	3
GTTTA	4																																																																																																	4
GTTTC	1																																																																																																	1
GTTTG	1																																																																																																	1
GTTTT	5																																																																																																	5
TAAAA	21																																																																																																	21
TAAAC	3																																																																																																	3
TAAAG	2																																																																																																	2
TAAAT	8																																																																																																	8
TAACA	3																																																																																																	3
TAACC	12	4	3	3		1		1				1																																																																																						25
TAACG	1																																																																																																	1
TAAGA	3																																																																																																	3
TAAGC	2																																																																																																	2
TAAGT	1																																																																																																	1
TAATA	12																																																																																																	12
TAATC	3																																																																																																	3
TAATG	3																																																																																																	3
TAATT	9																																																																																																	9
TACAA	2																																																																																																	2
TACAG	3																																																																																																	3
TACAT	2																																																																																																	2
TACCG	1																																																																																																	1
TACGA	1																																																																																																	1
TACGT	1																																																																																																	1
TACTA	3																																																																																																	3
TACTT	1																																																																																																	1
TAGAA	2	2	1																																																																																															5
TAGAC	2																																																																																																	2
TAGAG	1																																																																																																	1
TAGCT	1																																																																																																	1
TAGGA	1																																																																																																	1
TAGGG	1																																																																																																	1
TAGGT	9	7	2	6		2						1																																																																																						27
TAGTA	2	1																																																																																																3
TAGTC	3																																																																																																	3
TAGTT	1																																																																																																	1
TATAA	11																																																																																																	11
TATAC	4																																																																																																	4
TATAG	6																																																																																																	6
TATAT	5	1																																																																																																6
TATCA	3																																																																																																	3
TATCC	1																																																																																																	1
TATCT	1																																																																																																	1
TATGA	1																																																																																																	1
TATGG	2																																																																																																	2
TATGT	2																																																																																																	2
TATTA	19																																																																																																	19
TATTC	1																																																																																																	1
TATTG	10																																																																																																	10
TATTT	16			1																																																																																														17
TCAAA	4	1																																																																																																5
TCAAC	1																																																																																																	1
TCAAG	1																																																																																																	1
TCAAT	2																																																																																																	2
TCACC	1																																																																																																	1
TCACG	2																																																																																																	2
TCAGA	1	1																																																																																																2
TCATA	1																																																																																																	1
TCATG	1																																																																																																	1
TCATT	3		1																																																																																															4
TCCAG		1																																																																																																1
TCCAT	3																																																																																																	3
TCCCA	3	1																																																																																																4
TCCCG	3																																																																																																	3
TCGAA	2																																																																																																	2
TCGAG	1																																																																																																	1
TCGGA	1																																																																																																	1
TCGGC		1																																																																																																1
TCGGT	1																																																																																																	1
TCTAA	1																																																																																																	1
TCTAG	2																																																																																																	2
TCTAT	1																																																																																																	1
TCTCA	4																																																																																																	4
TCTCT	1	1																																																																																																2
TCTGA	1																																																																																																	1
TCTTA	2																																																																																																	2
TCTTT	4																																																																																																	4
TGAAA	7				1																																																																																													8
TGAAC	2																																																																																																	2
TGAAG	2																																																																																																	2
TGAAT	42																																																																																																	42
TGACA	1																																																																																																	1
TGACT	1																																																																																																	1
TGATC	1																																																																																																	1
TGATT	3	1																																																																																																4
TGCAA	1																																																																																																	1
TGCAT	1																																																																																																	1
TGCCA		1																																																																																																1
TGCCT	1																																																																																																	1
TGCTA	2																																																																																																	2
TGCTT	1																																																																																																	1
TGGAA	2	2																																																																																																4
TGGAC	1																																																																																																	1
TGGAT	2																																																																																																	2
TGGCA	4	1																																																																																																5
TGGCT	1																																																																																																	1
TGGTA	2																																																																																																	2
TGTAA	4	1																																																																																																5
TGTAC	2																																																																																																	2
TGTAG	1																																																																																																	1
TGTAT	6	4																																																																																																10
TGTCA	3																																																																																																	3
TGTGT	2																																																																																																	2
TGTTA	1																																																																																																	1
TGTTC	3																																																																																																	3
TGTTT	3																																																																																																	3
TTAAA	14																																																																																																	14
TTAAC	1																																																																																																	1
TTAAG	1																																																																																																	1
TTAAT	12																																																																																																	12
TTACA	7																																																																																																	7
TTACC	1																																																																																																	1
TTACG	4	2																																																																																																6
TTACT	1																																																																																																	1
TTAGA	6																																																																																																	6
TTAGC	1																																																																																																	1
TTAGG	8	8				2	1		3				1																																																																																					23
TTATA	10	1																																																																																																11
TTATC	1																																																																																																	1
TTATG	2																																																																																																	2
TTATT	23																																																																																																	23
TTCAA	5																																																																																																	5
TTCAC	2																																																																																																	2
TTCAG	3																																																																																																	3
TTCAT	6																																																																																																	6
TTCCA	2	1	1																																																																																															4
TTCCG	1																																																																																																	1
TTCGA	2																																																																																																	2
TTCGG	3																																																																																																	3
TTCTA	9	1																																																																																																10
TTCTT	1																																																																																																	1
TTGAA	2																																																																																																	2
TTGAC	2																																																																																																	2
TTGAG	5																																																																																																	5
TTGAT	3																																																																																																	3
TTGCA	1																																																																																																	1
TTGCC	1																																																																																																	1
TTGCT	1																																																																																																	1
TTGGA	1	1																																																																																																2
TTGGC	1																																																																																																	1
TTGGG	1																																																																																																	1
TTGTA	9	1		1																																																																																														11
TTGTC	1																																																																																																	1
TTGTG	1																																																																																																	1
TTGTT	4																																																																																																	4
TTTAA	23	1																																																																																																24
TTTAC	4																																																																																																	4
TTTAG	3	1																																																																																																4
TTTAT	25	1																																																																																																26
TTTCA	8	2	1	2																																																																																														13
TTTCC	1																																																																																																	1
TTTCG	1																																																																																																	1
TTTCT	4																																																																																																	4
TTTGA	8																																																																																																	8
TTTGG	1																																																																																																	1
TTTGT	2																																																																																																	2
TTTTA	40	1	1																																																																																															42
TTTTC	11																																																																																																	11
TTTTG	5																																																																																																	5
AAAAAT	2																																																																																																	2
AAAATA	2																																																																																																	2
AAACAA	1																																																																																																	1
AAACTC	2																																																																																																	2
AAAGAT	1																																																																																																	1
AAAGTC		1																																																																																																1
AAATGA	1																																																																																																	1
AAATTA	1																																																																																																	1
AAATTC			1																																																																																															1
AACCGG	1																																																																																																	1
AACCTC	1																																																																																																	1
AACTCA	1																																																																																																	1
AAGATA	1																																																																																																	1
AATAAA	1																																																																																																	1
AATAGA										1																																																																																								1
AATAGT	2																																																																																																	2
AATCCT	1																																																																																																	1
AATCGG	1																																																																																																	1
AATGAC	1																																																																																																	1
AATTAT	1																																																																																																	1
AATTTA	1																																																																																																	1
AATTTC	1																																																																																																	1
ACAAAA	1																																																																																																	1
ACACTA	1																																																																																																	1
ACAGCT	1																																																																																																	1
ACATTA	1																																																																																																	1
ACCATC	1																																																																																																	1
ACCGAA			1																																																																																															1
ACCGCA	2																																																																																																	2
ACCTCG	1																																																																																																	1
ACCTGG	1																																																																																																	1
ACCTGT	1																																																																																																	1
ACTAAC	1																																																																																																	1
ACTCAA	2																																																																																																	2
ACTCTG	1																																																																																																	1
ACTGGT	2																																																																																																	2
AGAGAA	1																																																																																																	1
AGATAC	1																																																																																																	1
AGCTGT	1																																																																																																	1
AGGGTT	1																																																																																																	1
AGTCAT	1																																																																																																	1
AGTCGG							2																																																																																											2
AGTGAG	1																																																																																																	1
AGTTCC	1																			1																																																																														2
ATAACC	1																																																																																																	1
ATACGG	1																																																																																																	1
ATAGAG							1																																																																																											1
ATAGGT	1																																																																																																	1
ATATAA											3																																																																																							3
ATATGA	2																																																																																																	2
ATATTT											1																																																																																							1
ATCCAG		1																																																																																																1
ATCCAT	1																																																																																																	1
ATGAGG		1																																																																																																1
ATGCCG				1																																																																																														1
ATGTGA	1																																																																																																	1
ATGTGC			1																																																																																															1
ATTAGC	1																																																																																																	1
ATTCCC					1																																																																																													1
ATTGAC	1																																																																																																	1
ATTGCG	1																																																																																																	1
ATTTAA	3																																																																																																	3
ATTTAT	1																																																																																																	1
ATTTCA	1																																																																																																	1
ATTTCC	1																																																																																																	1
ATTTCG	1				1																																																																																													2
ATTTCT					1																																																																																													1
ATTTGA	1																																																																																																	1
ATTTGG	1																																																																																																	1
CAAAAT	1																																																																																																	1
CAAACT	1																																																																																																	1
CAAATG	1																																																																																																	1
CAAGTT	1																																																																																																	1
CACCAG		1																																																																																																1
CACGCA	1																																																																																																	1
CAGAAT	1																																																																																																	1
CAGCCA	1																																																																																																	1
CAGGTC	1																																																																																																	1
CAGTTC	1																																																																																																	1
CATCCC	1																																																																																																	1
CATCGA	1																																																																																																	1
CATGGA			1																																																																																															1
CATGTC								1																																																																																										1
CATTTA	1																																																																																																	1
CCAGAT				1																																																																																														1
CCATTC	1																																																																																																	1
CCCTCG			1																																																																																															1
CCGAAG	1																																																																																																	1
CCGCGC	1																																																																																																	1
CCTGGA	1	1																																																																																																2
CCTTTA	1																																																																																																	1
CGAAAC		1																																																																																																1
CGACTC							1																																																																																											1
CGATTG	1																																																																																																	1
CGATTT	1																																																																																																	1
CGCACA	1																																																																																																	1
CGCAGG	1																																																																																																	1
CGCCAA	1																																																																																																	1
CGCCCG	1																																																																																																	1
CGCGGG	1																																																																																																	1
CGGGCG	1																																																																																																	1
CGTCGA	1																																																																																																	1
CGTGAT		1																																																																																																1
CGTTAC	1																																																																																																	1
CTATTT			1																																																																																															1
CTCGCC	1																																																																																																	1
CTGATC	1																																																																																																	1
CTGGAA	1																																																																																																	1
CTGGAC	3																																																																																																	3
CTGGAT	1									1																																																																																								2
CTTTTT	1																																																																																																	1
GAAATA	1																																																																																																	1
GAAATC	1																																																																																																	1
GAAATG			1				1																																																																																											2
GAATAG		1	1																																																																																															2
GAATGT		1																																																																																																1
GACTCA	1																																																																																																	1
GACTCC		2																																																																																																2
GAGAAA	1																																																																																																	1
GAGTTT	1																																																																																																	1
GATCAA	1																																																																																																	1
GATCCA		1																																																																																																1
GATCCT	1																																																																																																	1
GATCTG	2										1																																																																																							3
GCATCG										1																																																																																								1
GCCAAG	1																																																																																																	1
GCCGGG	1																																																																																																	1
GCGCAC	2																																																																																																	2
GCGCTG	1																																																																																																	1
GCGTAG	1																																																																																																	1
GCTGAT	1																																																																																																	1
GCTGGG	1																																																																																																	1
GCTTAT	1																																																																																																	1
GCTTGA	1																																																																																																	1
GGAAGC	1																																																																																																	1
GGACCT	1																																																																																																	1
GGCGCG	1																																																																																																	1
GGCTAC	1																																																																																																	1
GGGAGG	1																																																																																																	1
GGGCGA	1																																																																																																	1
GGTCGC	1																																																																																																	1
GTAAGT	1																																																																																																	1
GTAGAC	1																																																																																																	1
GTAGCA	1																																																																																																	1
GTCAAT	1																																																																																																	1
GTCCAG	8																																																																																																	8
GTCCGG		1																																																																																																1
GTCCTG	1																																																																																																	1
GTCGTA	1																																																																																																	1
GTCGTT	1																																																																																																	1
GTGCGC	1																																																																																																	1
GTGTTG	1																																																																																																	1
GTTCAC	1																																																																																																	1
GTTCCA				1																																																																																														1
GTTTGA	1																																																																																																	1
TAAATT	1																																																																																																	1
TAATGT	1																																																																																																	1
TACAAC										1																																																																																								1
TACGTA	1																																																																																																	1
TACTAA		1																																																																																																1
TACTAG	1																																																																																																	1
TACTGC	1																																																																																																	1
TAGAAA	1																																																																																																	1
TATATT											2																																																																																							2
TATGCA	1																																																																																																	1
TATTGG	1																																																																																																	1
TATTTA		1																																																																																																1
TATTTT	1																																																																																																	1
TCAAAA	1																																																																																																	1
TCAAAT	1	1																																																																																																2
TCAGGA	1																																																																																																	1
TCATAT	1																																																																																																	1
TCATTA	1																																																																																																	1
TCATTT	1																																																																																																	1
TCCAGA		1					1																																																																																											2
TCCAGG	3	1																																																																																																4
TCCAGT	1	1																																																																																																2
TCCGGC	1																																																																																																	1
TCGATA	1																																																																																																	1
TCGGGT				1																																																																																														1
TCGGTT	1						1																																																																																											2
TCTATT								1																																																																																										1
TCTCCA	1																																																																																																	1
TCTCCC	1																																																																																																	1
TCTTTG	1																																																																																																	1
TGAATT	1																																																																																																	1
TGACAG	1																																																																																																	1
TGACCA	1																																																																																																	1
TGAGGC	1																																																																																																	1
TGATAA	1																																																																																																	1
TGCAGC	1																																																																																																	1
TGCATG	1																																																																																																	1
TGGAGG		1																																																																																																1
TGGCTC	1																																																																																																	1
TGTCAA	1																																																																																																	1
TGTGCA		1																																																																																																1
TTAAAA	1																																																																																																	1
TTAAGA	1																																																																																																	1
TTAGCG	1																																																																																																	1
TTCAAA	1																																																																																																	1
TTCAGC	1																																																																																																	1
TTCAGT	2																																																																																																	2
TTCCAG			2																																																																																															2
TTCTGG	1																																																																																																	1
TTGAAA	1																																																																																																	1
TTGCCA	1																																																																																																	1
TTGGAA	1																																																																																																	1
TTGTTA	1																																																																																																	1
TTTACC	1																																																																																																	1
TTTCTA	1																																																																																																	1
TTTCTC	1																																																																																																	1
TTTGAC	1																																																																																																	1
TTTGAG	7																																																																																																	7
TTTTAT	3																																																																																																	3
TTTTTA	2																																																																																																	2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	17	22	8	3	9	4	6	8	2	4	1	2	2	2	1	4		1	2			2	1	2	1		2		2		2						1	1																	2	1		1																					1	136
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	6	4	1	3	8	3	5	6	1	5	1	2	2			1	2	2	1	1	4	1		3	2			1			3	3			1																																													81
AC/GT	-	-	-	187	84	69	38	26	13	8	4		4	2	1	1	1																									1																																																								439
AG/CT	-	-	-	169	64	29	14	6	4	3		2																							1																																																															292
AT/AT	-	-	-	414	206	148	121	82	69	31	25	18	12	10	5	5	5	2	1	2	3	1																																																																												1160
CG/CG	-	-	-	19																																																																																														19
AAC/GTT	-	-	19	3	1																																																																																													23
AAG/CTT	-	-	64	12	1																																																																																													77
AAT/ATT	-	-	176	47	11	5		2	1		1																																																																																							243
ACC/GGT	-	-	5	1	1																																																																																													7
ACG/CGT	-	-	1			1																																																																																												2
ACT/AGT	-	-	36	8	3																																																																																													47
AGC/CTG	-	-	9																																																																																															9
AGG/CCT	-	-	2	2	2	1																																																																																												7
ATC/ATG	-	-	35	10	2																																																																																													47
CCG/CGG	-	-	10	1	1																																																																																													12
AAAC/GTTT	-	60	7		1		1																																																																																											69
AAAG/CTTT	-	72	27	7	1		2																																																																																											109
AAAT/ATTT	-	215	40	6	1			1																																																																																										263
AACC/GGTT	-	3																																																																																																3
AACG/CGTT	-		1																																																																																															1
AACT/AGTT	-	15	3		1																																																																																													19
AAGC/CTTG	-	2	1																																																																																															3
AAGG/CCTT	-	4																																																																																																4
AAGT/ACTT	-	17	1																																																																																															18
AATC/ATTG	-	24	2																																																																																															26
AATG/ATTC	-	27	5	1							1																																																																																							34
AATT/AATT	-	20		3																																																																																														23
ACAG/CTGT	-	51	14	4	1	1	1	1																																																																																										73
ACAT/ATGT	-	71	26	6	2		1																																																																																											106
ACCG/CGGT	-	2		1																																																																																														3
ACCT/AGGT	-	5	1																																																																																															6
ACGC/CGTG	-	3																																																																																																3
ACGG/CCGT	-	7	4		1																																																																																													12
ACGT/ACGT	-	2																																																																																																2
ACTC/AGTG	-	1																																																																																																1
ACTG/AGTC	-	3	2	1																																																																																														6
AGAT/ATCT	-	33	9				1																																																																																											43
AGCG/CGCT	-	1																																																																																																1
AGCT/AGCT	-	3																																																																																																3
AGGC/CCTG	-					1																																																																																												1
AGGG/CCCT	-	2																																																																																																2
ATCC/ATGG	-	13																																																																																																13
ATCG/ATCG	-	2																																																																																																2
AAAAC/GTTTT	33																																																																																																	33
AAAAG/CTTTT	44																																																																																																	44
AAAAT/ATTTT	235	6	1	1			1																																																																																											244
AAACC/GGTTT	4																																																																																																	4
AAACG/CGTTT	6																																																																																																	6
AAACT/AGTTT	29	1																																																																																																30
AAAGC/CTTTG	4																																																																																																	4
AAAGG/CCTTT	5	1																																																																																																6
AAAGT/ACTTT	19																																																																																																	19
AAATC/ATTTG	43	2	1																																																																																															46
AAATG/ATTTC	60	10	3	2	1	1																																																																																												77
AAATT/AATTT	139	2	1																																																																																															142
AACAC/GTGTT	6																																																																																																	6
AACAG/CTGTT	6																																																																																																	6
AACAT/ATGTT	12																																																																																																	12
AACCC/GGGTT	2																																																																																																	2
AACCG/CGGTT	11	1																																																																																																12
AACCT/AGGTT	111	58	24	27	10	11	8	8	7	4	2	6	5																																																																																					281
AACGC/CGTTG	3																																																																																																	3
AACGG/CCGTT	2																																																																																																	2
AACGT/ACGTT	19	2																																																																																																21
AACTC/AGTTG	13	1																																																																																																14
AACTG/AGTTC	13				1																																																																																													14
AACTT/AAGTT	13																																																																																																	13
AAGAC/CTTGT	5																																																																																																	5
AAGAG/CTCTT	2	1																																																																																																3
AAGAT/ATCTT	14																																																																																																	14
AAGCC/CTTGG	4																																																																																																	4
AAGCG/CGCTT	5																																																																																																	5
AAGCT/AGCTT	10																																																																																																	10
AAGGC/CCTTG	4																																																																																																	4
AAGGG/CCCTT	3																																																																																																	3
AAGGT/ACCTT	9	1																																																																																																10
AAGTC/ACTTG	8																																																																																																	8
AAGTG/ACTTC	7																																																																																																	7
AATAC/ATTGT	50	10		1																																																																																														61
AATAG/ATTCT	23	5	1																																																																																															29
AATAT/ATATT	114	2	1																																																																																															117
AATCC/ATTGG	10	1																																																																																																11
AATCG/ATTCG	19																																																																																																	19
AATCT/AGATT	18																																																																																																	18
AATGC/ATTGC	9																																																																																																	9
AATGG/ATTCC	19	13	4	6																																																																																														42
AATGT/ACATT	23	3																																																																																																26
AATTC/AATTG	116	2																																																																																																118
ACACG/CGTGT	5	1	1																																																																																															7
ACACT/AGTGT	7	1																																																																																																8
ACAGC/CTGTG	3																																																																																																	3
ACAGG/CCTGT	5																																																																																																	5
ACAGT/ACTGT	13	1																																																																																																14
ACATC/ATGTG	5																																																																																																	5
ACATG/ATGTC	10		1																																																																																															11
ACCAG/CTGGT	3																																																																																																	3
ACCAT/ATGGT	6																																																																																																	6
ACCCC/GGGGT	2																																																																																																	2
ACCCT/AGGGT	1																																																																																																	1
ACCGT/ACGGT	2																																																																																																	2
ACCTC/AGGTG	3																																																																																																	3
ACGAG/CGTCT	2																																																																																																	2
ACGAT/ATCGT	3																																																																																																	3
ACGCC/CGTGG	2																																																																																																	2
ACGCG/CGCGT	2																																																																																																	2
ACGGG/CCCGT	38	6		1																																																																																														45
ACGTC/ACGTG	7																																																																																																	7
ACTAG/AGTCT	9																																																																																																	9
ACTAT/AGTAT	24	2																																																																																																26
ACTCC/AGTGG	2																																																																																																	2
ACTCG/AGTCG	1																																																																																																	1
ACTCT/AGAGT	4																																																																																																	4
ACTGC/AGTGC	1																																																																																																	1
ACTGG/AGTCC	3	1																																																																																																4
AGAGC/CTCTG	1																																																																																																	1
AGAGG/CCTCT	2																																																																																																	2
AGATC/ATCTG	11	1																																																																																																12
AGATG/ATCTC	7																																																																																																	7
AGCAT/ATGCT	6																																																																																																	6
AGCCC/CTGGG	2	1																																																																																																3
AGCCG/CGGCT	1	1																																																																																																2
AGCGG/CCGCT	2																																																																																																	2
AGGAT/ATCCT	9																																																																																																	9
AGGCC/CCTGG		1																																																																																																1
AGGGG/CCCCT	1																																																																																																	1
ATATC/ATATG	13	1																																																																																																14
ATCCC/ATGGG	4	1																																																																																																5
ATCCG/ATCGG	3																																																																																																	3
ATCGC/ATGCG	1																																																																																																	1
ATGCC/ATGGC	17	2		1																																																																																														20
CCCCG/CGGGG	1																																																																																																	1
CCGCG/CGCGG	8	1																																																																																																9
AAAAAC/GTTTTT	2																																																																																																	2
AAAAAG/CTTTTT	1																																																																																																	1
AAAAAT/ATTTTT	11																																																																																																	11
AAAATC/ATTTTG	2																																																																																																	2
AAAATG/ATTTTC	2																																																																																																	2
AAAATT/AATTTT	2																																																																																																	2
AAACCG/CGGTTT	1	1	1				1																																																																																											4
AAACTC/AGTTTG	15																																																																																																	15
AAACTG/AGTTTC	2																																																																																																	2
AAAGAC/CTTTGT	1																																																																																																	1
AAAGAG/CTCTTT	3																																																																																																	3
AAAGAT/ATCTTT	2																																																																																																	2
AAAGGT/ACCTTT	2																																																																																																	2
AAAGTC/ACTTTG	1	1																																																																																																2
AAATAG/ATTTCT	3		1		1			1		1																																																																																								7
AAATAT/ATATTT	1	1									6																																																																																							8
AAATCC/ATTTGG	1																																																																																																	1
AAATCG/ATTTCG	3				1																																																																																													4
AAATGC/ATTTGC	1																																																																																																	1
AAATGG/ATTTCC	1		1				1																																																																																											3
AAATGT/ACATTT	1																																																																																																	1
AAATTC/AATTTG	4	1	1																																																																																															6
AAATTG/AATTTC	3																																																																																																	3
AAATTT/AAATTT	5																																																																																																	5
AACAAT/ATTGTT	1																																																																																																	1
AACACC/GGTGTT	1																																																																																																	1
AACACT/AGTGTT	2																																																																																																	2
AACATT/AATGTT	2																																																																																																	2
AACCAG/CTGGTT	1																																																																																																	1
AACCAT/ATGGTT	1																																																																																																	1
AACCCG/CGGGTT				1																																																																																														1
AACCCT/AGGGTT	1																																																																																																	1
AACCGC/CGGTTG	2																																																																																																	2
AACCGG/CCGGTT	1																																																																																																	1
AACCTC/AGGTTG	1																																																																																																	1
AACGAC/CGTTGT	1																																																																																																	1
AACGCC/CGTTGG	1																																																																																																	1
AACGCT/AGCGTT	1																																																																																																	1
AACGGT/ACCGTT	1																																																																																																	1
AACGTG/ACGTTC	1																																																																																																	1
AACTAC/AGTTGT										1																																																																																								1
AACTGG/AGTTCC	4	1	2	1																1																																																																														9
AACTTG/AAGTTC	1																																																																																																	1
AAGATC/ATCTTG	1																																																																																																	1
AAGATT/AATCTT	1																																																																																																	1
AAGCAT/ATGCTT	1																																																																																																	1
AAGCCG/CGGCTT	1																																																																																																	1
AAGCGG/CCGCTT	1																																																																																																	1
AAGCTC/AGCTTG	1																																																																																																	1
AAGCTG/AGCTTC	1																																																																																																	1
AAGGCC/CCTTGG	1																																																																																																	1
AAGTGT/ACACTT	1																																																																																																	1
AATACC/ATTGGT	1																																																																																																	1
AATACT/AGTATT		1																																																																																																1
AATAGG/ATTCCT		1	1																																																																																															2
AATAGT/ACTATT	2																																																																																																	2
AATATG/ATATTC	3																																																																																																	3
AATCAG/ATTCTG	1																																																																																																	1
AATCCT/AGGATT	1																																																																																																	1
AATCGC/ATTGCG	2																																																																																																	2
AATCGG/ATTCCG	1																																																																																																	1
AATGAC/ATTGTC	1																																																																																																	1
AATGAT/ATCATT	2																																																																																																	2
AATGCT/AGCATT	1																																																																																																	1
AATGGC/ATTGCC	1																																																																																																	1
AATGGG/ATTCCC	1				1																																																																																													2
AATGTC/ACATTG	3																																																																																																	3
AATGTG/ACATTC	1	1																																																																																																2
AATTAT/AATTAT	1																																																																																																	1
AATTCC/AATTGG	1																																																																																																	1
ACACGC/CGTGTG	2																																																																																																	2
ACAGAT/ATCTGT	1																																																																																																	1
ACAGCC/CTGTGG	1																																																																																																	1
ACAGCT/AGCTGT	2																																																																																																	2
ACAGGT/ACCTGT	1																																																																																																	1
ACAGTG/ACTGTC	1																																																																																																	1
ACATCG/ATGTCG	1																																																																																																	1
ACATGC/ATGTGC	1	1	1																																																																																															3
ACATGG/ATGTCC			1					1																																																																																										2
ACCAGC/CTGGTG		1																																																																																																1
ACCAGG/CCTGGT	1																																																																																																	1
ACCAGT/ACTGGT	2																																																																																																	2
ACCATC/ATGGTG	1																																																																																																	1
ACCATG/ATGGTC	1																																																																																																	1
ACCCGG/CCGGGT		1																																																																																																1
ACCGCG/CGCGGT	1																																																																																																	1
ACCTAT/AGGTAT	1																																																																																																	1
ACCTCC/AGGTGG		1																																																																																																1
ACCTCG/AGGTCG	1																																																																																																	1
ACCTGG/AGGTCC	18	2																																																																																																20
ACGACT/AGTCGT	1																																																																																																	1
ACGATC/ATCGTG		1																																																																																																1
ACGCCT/AGGCGT	1																																																																																																	1
ACGCGC/CGCGTG	3																																																																																																	3
ACGGAT/ATCCGT	1																																																																																																	1
ACGGCT/AGCCGT	1																																																																																																	1
ACGTAG/ACGTCT	1																																																																																																	1
ACGTAT/ACGTAT	1																																																																																																	1
ACGTCG/ACGTCG	1																																																																																																	1
ACTAGT/ACTAGT	1																																																																																																	1
ACTATG/AGTCAT	1																																																																																																	1
ACTCAG/AGTCTG	1																																																																																																	1
ACTCCG/AGTCGG		2					3																																																																																											5
ACTCTC/AGAGTG	1																																																																																																	1
ACTCTG/AGAGTC	1																																																																																																	1
ACTGCT/AGCAGT	2																																																																																																	2
AGAGAT/ATCTCT							1																																																																																											1
AGAGCC/CTCTGG	1																																																																																																	1
AGAGGG/CCCTCT	1																																																																																																	1
AGATCC/ATCTGG	3	3		1			1			1	1																																																																																							10
AGATGG/ATCTCC	1																																																																																																	1
AGCATC/ATGCTG	1																																																																																																	1
AGCCCC/CTGGGG	1																																																																																																	1
AGCCGG/CCGGCT	1																																																																																																	1
AGCCTC/AGGCTG	1																																																																																																	1
AGCGCC/CGCTGG	1																																																																																																	1
AGCTGC/AGCTGC	1																																																																																																	1
AGGATC/ATCCTG	3																																																																																																	3
AGGATG/ATCCTC		1																																																																																																1
AGGCGC/CCTGCG	1																																																																																																	1
AGGGCG/CCCTCG	2		1																																																																																															3
AGGGGG/CCCCCT	1																																																																																																	1
ATATCC/ATATGG	1																																																																																																	1
ATATCG/ATATCG	1																																																																																																	1
ATATGC/ATATGC	1																																																																																																	1
ATCCCC/ATGGGG	1																																																																																																	1
ATCGGC/ATGCCG				1						1																																																																																								2
CCCCGG/CCGGGG	1																																																																																																	1
CCCGCG/CGCGGG	5																																																																																																	5
