Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018245315.1/fasta/hub_GCA_018245315.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              164699
Total size of examined sequences (bp):           50459059
Total number of identified SSRs:                 7805
Number of SSR containing sequences:              6375
Number of sequences containing more than 1 SSR:  917
Number of SSRs present in compound formation:    1127


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	611
2	2401
3	554
4	1737
5	2046
6	456

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	39	28	14	21	13	14	8	9	4	5	8		2	3	1	1	2	2				3	1	2			2	2	1	1	1	1		2	1	1					2					1	2	1		1		1						1					201
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	6	4	1	1	4	1	1		1	1			3	1	2	1		1			1	1		1	1			1	1	1	1					1																										39
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	3	4	2	2	4		2	2	1		1	1	2	1		4	1		1	2	1	2				1					2		2						1																							52
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	49	31	31	27	19	22	12	11	7	11	8	8	7	5	4	7	3	2	4	1	3	3	2	3	2	2	4	3	1	1	2	2			1	2					1	1				1	1		1	4	1	2		1	1	2	2					1	319
AC	-	-	-	37	27	15	9	9	4	2	4	1	3	1						1	1																																																											114
AG	-	-	-	77	50	22	9	7	6	4	5	2	1																																																																			183
AT	-	-	-	213	86	54	52	24	25	14	16	12	6	1						1																																																												504
CA	-	-	-	23	16	8	3	1	3		1		1	1	1			1																																																														59
CG	-	-	-	7	1		1																																																																									9
CT	-	-	-	80	42	21	14	5	1	3	2	3				1											1																																																					173
GA	-	-	-	55	26	13	6	6	2	5	1	1		1		1	1																																																															118
GC	-	-	-	9	1	1																																																																										11
GT	-	-	-	36	19	14	9	7	2	2	1	2	2	1			1				1		1					1			1																																																	100
TA	-	-	-	275	95	62	34	29	25	14	9	5	6	4	2		1	1		1																																																												563
TC	-	-	-	155	84	52	28	20	10	16	3	5	2	2	3							2																																																										382
TG	-	-	-	72	33	23	18	11	6	5	3	5		4	1		1							2		1																																																						185
AAC	-	-	2	2																																																																												4
AAG	-	-	8	2	1																																																																											11
AAT	-	-	30	4	1																																																																											35
ACA	-	-		3																																																																												3
ACC	-	-	2																																																																													2
ACG	-	-		1																																																																												1
ACT	-	-	1	1		1																																																																										3
AGA	-	-	12	2																																																																												14
AGG	-	-	1																																																																													1
AGT	-	-	1																																																																													1
ATA	-	-	28	2																																																																												30
ATC	-	-	22	4		1	1																																																																									28
ATG	-	-	11	5	2	1					1																																																																					20
ATT	-	-	43	2																																																																												45
CAA	-	-	2		1																																																																											3
CAC	-	-	3	1																																																																												4
CAG	-	-	4	1																																																																												5
CAT	-	-	9	4	1			1																																																																								15
CCA	-	-		1																																																																												1
CCG	-	-	1				1																																																																									2
CCT	-	-	2																																																																													2
CGA	-	-	1																																																																													1
CGC	-	-	2	1																																																																												3
CGG	-	-	1																																																																													1
CGT	-	-	2																																																																													2
CTA	-	-	6										1																																																																			7
CTC	-	-	2																																																																													2
CTG	-	-	4																																																																													4
CTT	-	-	8	3	1																																																																											12
GAA	-	-	4																																																																													4
GAC	-	-	1	2																																																																												3
GAG	-	-	1	1																																																																												2
GAT	-	-	15	2	2		4	3																																																																								26
GCA	-	-	1			1																																																																										2
GCC	-	-	3																																																																													3
GCG	-	-	4																																																																													4
GGA	-	-	1	1																																																																												2
GGC	-	-	3		1																																																																											4
GGT	-	-	2				1																																																																									3
GTA	-	-	2			1																																																																										3
GTC	-	-	1																																																																													1
GTG	-	-	1		1																																																																											2
GTT	-	-	5	2																																																																												7
TAA	-	-	10	2	1																																																																											13
TAC	-	-	6					1																																																																								7
TAG	-	-	3	1		1																																																																										5
TAT	-	-	22	9																																																																												31
TCA	-	-	18	12	6		1						1																																																																			38
TCC	-	-	1																																																																													1
TCG	-	-	1	2																																																																												3
TCT	-	-	10	3	1																																																																											14
TGA	-	-	35	8	6		2	2																																																																								53
TGC	-	-	1																																																																													1
TGG	-	-	4	1																																																																												5
TGT	-	-	8	1																																																																												9
TTA	-	-	24	2																																																																												26
TTC	-	-	8	2		1																																																																										11
TTG	-	-	4	3	2																																																																											9
AAAC	-	9																																																																														9
AAAG	-	16	7	2																																																																												25
AAAT	-	36	5																																																																													41
AACA	-	10	4	1																																																																												15
AACC	-	1																																																																														1
AACG	-			1																																																																												1
AACT	-			1																																																																												1
AAGA	-	8	6	1																																																																												15
AAGC	-	2																																																																														2
AATA	-	42	6	1																																																																												49
AATC	-	2		1																																																																												3
AATG	-	4	3	1	2	1																																																																										11
AATT	-	10	1																																																																													11
ACAA	-	5	2																																																																													7
ACAG	-	48	1			1																																																																										50
ACAT	-	15	3	1	1	1																																																																										21
ACCA	-	1																																																																														1
ACCT	-	2	1																																																																													3
ACGT	-	1																																																																														1
ACTC	-	1	2																																																																													3
ACTG	-		1																																																																													1
AGAA	-	9	6																																																																													15
AGAC	-	27	3	1		1																																																																										32
AGAT	-	1																																																																														1
AGCG	-	3																																																																														3
AGGA	-	2																																																																														2
AGGT	-	1	1																																																																													2
AGTC	-	6																																																																														6
AGTG	-	1																																																																														1
AGTT	-	1																																																																														1
ATAA	-	16	4	1																																																																												21
ATAC	-	42	4	1																																																																												47
ATAG	-	1																																																																														1
ATCA	-	4																																																																														4
ATCC	-	5	2																																																																													7
ATCT	-	4																																																																														4
ATGA	-	13	3	1	1	1								1																																																																		20
ATGC	-	2																																																																														2
ATGG	-	2	2	1																																																																												5
ATGT	-	4																																																																														4
ATTA	-	10	1		1																																																																											12
ATTC	-	9	7																																																																													16
ATTG	-	3	2																																																																													5
ATTT	-	14	1																																																																													15
CAAA	-	3	2																																																																													5
CAAC	-	1																																																																														1
CAAG	-	1																																																																														1
CAAT	-		1																																																																													1
CACC	-	1																																																																														1
CACT	-	3	2																																																																													5
CAGA	-	34	5																																																																													39
CATA	-	14	6		1																																																																											21
CATC	-	9	2		1	1																																																																										13
CATT	-	20	7																																																																													27
CCAG	-		1																																																																													1
CCAT	-	3	1																																																																													4
CCGT	-	1	1																																																																													2
CCTA	-	1					1																																																																									2
CCTT	-	2																																																																														2
CGAC	-	1																																																																														1
CGCT	-	1																																																																														1
CGGT	-	1	1																																																																													2
CTAA	-		1																																																																													1
CTAG	-		1																																																																													1
CTAT	-	4																																																																														4
CTCA	-	3							1																																																																							4
CTCG	-	1																																																																														1
CTGA	-	1																																																																														1
CTGT	-	25	2	1	2		1						1					1																																																														33
CTTA	-	2																																																																														2
CTTC	-	3																																																																														3
CTTT	-	7	3		1					1						1																																																																13
GAAA	-	18	4	2																																																																												24
GAAC	-		2					1																																																																								3
GAAG	-	1																																																																														1
GAAT	-	17	4	4	1																																																																											26
GACA	-	16	5																																																																													21
GACC	-			1																																																																												1
GACG	-	1																																																																														1
GACT	-	1																																																																														1
GAGG	-	1																																																																														1
GAGT	-	1							1																																																																							2
GATA	-	1																																																																														1
GATG	-	16	5	1																																																																												22
GATT	-	1																																																																														1
GCAA	-	2																																																																														2
GCAT	-	1																																																																														1
GGAA	-		1																																																																													1
GGAC	-	2																																																																														2
GGAT	-		1																																																																													1
GGTA	-	1																																																																														1
GGTC	-	3																																																																														3
GGTG	-	1																																																																														1
GTAC	-	1																																																																														1
GTAG	-	1																																																																														1
GTAT	-	11	1																																																																													12
GTCA	-	1																																																																														1
GTCC	-	1	1																																																																													2
GTCG	-	3	2																																																																													5
GTCT	-	27	9	2	2				1																																																																							41
GTGC	-	1																																																																														1
GTTA	-	1																																																																														1
GTTC	-	1																																																																														1
GTTT	-	8																																																																														8
TAAA	-	42	4	1																																																																												47
TAAC	-	2																																																																														2
TAAG	-		1																																																																													1
TAAT	-	11	4																																																																													15
TACA	-	41	3	1			1																																																																									46
TACC	-	1					1																																																																									2
TACT	-	1																																																																														1
TAGA	-	3																																																																														3
TAGG	-		2																																																																													2
TAGT	-	2																																																																														2
TATC	-	8	1			1	1																																																																									11
TATG	-	102	21	5	3	1																																																																										132
TATT	-	30	5		1																																																																											36
TCAA	-	3		1																																																																												4
TCAC	-	3	2																																																																													5
TCAG	-		1																																																																													1
TCAT	-	26	5	1	1																																																																											33
TCCA	-	6					1																																																																									7
TCCG	-	2																																																																														2
TCCT	-	1	1																																																																													2
TCGC	-	2																																																																														2
TCGT	-	1				1																																																																										2
TCTA	-	1		1																																																																												2
TCTG	-	24	6	2			1																																																																									33
TCTT	-	8	2																																																																													10
TGAA	-	16	7	3	1																																																																											27
TGAG	-	1							1																																																																							2
TGAT	-	2																																																																														2
TGCC	-																	1																																																														1
TGGA	-	1			1																																																																											2
TGGT	-	1																																																																														1
TGTA	-	9	3	2																																																																												14
TGTC	-	86	16	5	3	2		1	2																																																																							115
TGTT	-	16	4				1																																																																									21
TTAA	-	14	1																																																																													15
TTAC	-	1																																																																														1
TTAT	-	36	4										1																																																																			41
TTCA	-	37	10	3	1		1																																																																									52
TTCC	-	4																																																																														4
TTCG	-	1																																																																														1
TTCT	-	8	2	1																																																																												11
TTGA	-	2	2																																																																													4
TTGG	-			1																																																																												1
TTGT	-	10		1																																																																												11
TTTA	-	54	6	1																																																																												61
TTTC	-	33	12	6																																																																												51
TTTG	-	15			1																																																																											16
AAAAC	4																																																																															4
AAAAG	6																																																																															6
AAAAT	41	1																																																																														42
AAACA	2																																																																															2
AAACG	1																																																																															1
AAACT	2	1																																																																														3
AAAGA	4	1																																																																														5
AAAGC	2																																																																															2
AAAGG	1																																																																															1
AAAGT	2	1																																																																														3
AAATA	26	1	1	1																																																																												29
AAATC	8																																																																															8
AAATG	1																																																																															1
AAATT	26	1																																																																														27
AACAA	7	1																																																																														8
AACAC	1																																																																															1
AACAG	2																																																																															2
AACCC	2																																																																															2
AACCG	1																																																																															1
AACCT	18	5	4	3	1	1	2	3																																																																								37
AACGG	1																																																																															1
AACGT	1	1											1																																																																			3
AACTA	1																																																																															1
AACTT	2																																																																															2
AAGAA	6																																																																															6
AAGAG	1																																																																															1
AAGAT	1																																																																															1
AAGGA	2																																																																															2
AAGGC	1																																																																															1
AAGTG	1																																																																															1
AATAA	37																																																																															37
AATAC	8		1																																																																													9
AATAG	1																																																																															1
AATAT	18																																																																															18
AATCA	2																																																																															2
AATCG	2																																																																															2
AATGA	2	1																																																																														3
AATGG	1																																																																															1
AATGT	4																																																																															4
AATTA	17	1																																																																														18
AATTC	6																																																																															6
AATTG	1																																																																															1
AATTT	24	3																																																																														27
ACAAA	1																																																																															1
ACAAC	2			1																																																																												3
ACAAT	1																																																																															1
ACAGA	2	1																																																																														3
ACAGT	2																																																																															2
ACATA	1																																																																															1
ACATT	2																																																																															2
ACCAT	1																																																																															1
ACCCT	1																																																																															1
ACCGA	2																																																																															2
ACCGC	1																																																																															1
ACCTA	9	2	1	1		3		2	3																																																																							21
ACCTC	1																																																																															1
ACGAA	1																																																																															1
ACGCG	1																																																																															1
ACGCT	1																																																																															1
ACGTG	1			1																																																																												2
ACGTT	1																																																																															1
ACTAA	2																																																																															2
ACTAT	1																																																																															1
ACTCA	2																																																																															2
ACTCC	3																																																																															3
ACTCT	2																																																																															2
ACTGG	1																																																																															1
ACTGT	1																																																																															1
ACTTA	1																																																																															1
ACTTC	2																																																																															2
ACTTT	1																																																																															1
AGAAA	7																																																																															7
AGAAC	1																																																																															1
AGAAG	1																																																																															1
AGACA	1																																																																															1
AGATA	1																																																																															1
AGATC	1																																																																															1
AGATT	2																																																																															2
AGCCG	1																																																																															1
AGCTG	1																																																																															1
AGGAC				1																																																																												1
AGGAT	4																																																																															4
AGGTA	1																																																																															1
AGGTC	1																																																																															1
AGGTT	11	7	1		2	1	1	1			2																																																																					26
AGTAC	1																																																																															1
AGTAG	1																																																																															1
AGTAT	1																																																																															1
AGTCA	1																																																																															1
AGTCG	1																																																																															1
AGTCT	2																																																																															2
AGTGA	1																																																																															1
AGTGG	1	1																																																																														2
AGTTA	1																																																																															1
AGTTC	1																																																																															1
AGTTG	1																																																																															1
AGTTT	3																																																																															3
ATAAA	22																																																																															22
ATAAC	3																																																																															3
ATAAG	1																																																																															1
ATAAT	113	4																																																																														117
ATACA	6	1																																																																														7
ATAGA	1																																																																															1
ATAGG	2																																																																															2
ATAGT	3																																																																															3
ATATA	15																																																																															15
ATATC	2																																																																															2
ATATT	28		1																																																																													29
ATCAA	1																																																																															1
ATCAC	1																																																																															1
ATCAG		2		1																																																																												3
ATCAT	3																																																																															3
ATCCC	1																																																																															1
ATCCG	1																																																																															1
ATCCT	1																																																																															1
ATCGT	1																																																																															1
ATCTA	1																																																																															1
ATCTC	2																																																																															2
ATCTG	1																																																																															1
ATCTT	1																																																																															1
ATGAA	3																																																																															3
ATGAC		1																																																																														1
ATGAT	3																																																																															3
ATGCA	1																																																																															1
ATGCG	1																																																																															1
ATGGA	1																																																																															1
ATGGG	1																																																																															1
ATGTC	1																																																																															1
ATGTG	1																																																																															1
ATGTT	1																																																																															1
ATTAA	18	1																																																																														19
ATTAC	2			1																																																																												3
ATTAG	1																																																																															1
ATTAT	128	4																																																																														132
ATTCA	1																																																																															1
ATTCC	2	1		2																																																																												5
ATTCG	1			1																																																																												2
ATTCT	8																																																																															8
ATTGC	1																																																																															1
ATTGT	4																																																																															4
ATTTA	26	1																																																																														27
ATTTC	8	1																																																																														9
ATTTG	13	1																																																																														14
ATTTT	32																																																																															32
CAAAA	3																																																																															3
CAAAT	1																																																																															1
CAACA	1																																																																															1
CAACC	1																																																																															1
CAACG	1																																																																															1
CAACT	1																																																																															1
CAATA	5																																																																															5
CAATC	1																																																																															1
CAATG	1																																																																															1
CAATT	1																																																																															1
CACAG	1																																																																															1
CACAT	1	1																																																																														2
CACGT	1																																																																															1
CAGAG	1																																																																															1
CAGAT			1																																																																													1
CATAA	1																																																																															1
CATAG	1																																																																															1
CATTA	2																																																																															2
CATTC			1																																																																													1
CATTG	1																																																																															1
CCAAC	2																																																																															2
CCAAG	1	1																																																																														2
CCACT	1																																																																															1
CCATA	1																																																																															1
CCATC	1																																																																															1
CCATT	1	1																																																																														2
CCGGT	1																																																																															1
CCTAA	12	5	1	3	1	3	1	3	4	3			1																																																																			37
CCTTC	1																																																																															1
CCTTT	2																																																																															2
CGAAA	1																																																																															1
CGAAG	5																																																																															5
CGACT	1																																																																															1
CGATA	1																																																																															1
CGATG	1																																																																															1
CGATT	1																																																																															1
CGCGA	1																																																																															1
CGCGC	1																																																																															1
CGCGT	1																																																																															1
CGCTT	3																																																																															3
CGTAA	1																																																																															1
CGTAG	1																																																																															1
CGTCA	1																																																																															1
CGTTA	1																																																																															1
CTAAA	4																																																																															4
CTAAC	19	8	1	2			2						1																																																																			33
CTAAG	1																																																																															1
CTAAT	1																																																																															1
CTACT	2																																																																															2
CTAGA	1																																																																															1
CTATA	3																																																																															3
CTATC	2																																																																															2
CTATT	1																																																																															1
CTCCA	1																																																																															1
CTCCT	1																																																																															1
CTCTA	1																																																																															1
CTCTC	1																																																																															1
CTCTT	3																																																																															3
CTGAA	1																																																																															1
CTGAG	1																																																																															1
CTGGT	1																																																																															1
CTGTA	1	1																																																																														2
CTGTT	1																																																																															1
CTTAA	1																																																																															1
CTTAC	1																																																																															1
CTTCA	3																																																																															3
CTTCG	2																																																																															2
CTTGA	1																																																																															1
CTTGT	1																																																																															1
CTTTA	1																																																																															1
CTTTC	5							1	1																																																																							7
CTTTG	2																																																																															2
CTTTT	2	2																																																																														4
GAAAA	5																																																																															5
GAAAG	1																																																																															1
GAACA	1																																																																															1
GAACT	1																																																																															1
GAAGA	3																																																																															3
GAAGC	1																																																																															1
GAATC	1																																																																															1
GAATG	1																																																																															1
GACAA	1																																																																															1
GACAG	1																																																																															1
GACCA	1																																																																															1
GACCG	1																																																																															1
GACGT	1																																																																															1
GACTC	1																																																																															1
GAGAC	2																																																																															2
GAGGA		2																																																																														2
GAGGC	1																																																																															1
GAGGT	2																																																																															2
GAGTA	1																																																																															1
GAGTC	1																																																																															1
GAGTG	1																																																																															1
GATCG	1																																																																															1
GATCT	1																																																																															1
GATTA	2																																																																															2
GATTC	2							1																																																																								3
GATTG	4																																																																															4
GATTT	1																																																																															1
GCAAA	1																																																																															1
GCACG	1																																																																															1
GCCGC	1																																																																															1
GCGAA	2																																																																															2
GCGCC	1																																																																															1
GCGCG	1																																																																															1
GCGCT	1																																																																															1
GCGGC	1																																																																															1
GCTAT	1																																																																															1
GCTTC	3																																																																															3
GCTTG	1																																																																															1
GGAAT	1																																																																															1
GGACC	2																																																																															2
GGATG	2																																																																															2
GGATT	1																																																																															1
GGCGG	1																																																																															1
GGGGT	1																																																																															1
GGGTT	1	1																																																																														2
GGTAA	1																																																																															1
GGTTA	14	7	4	2	2	1	2		1	2	1	3	1																																																																			40
GGTTG	2																																																																															2
GGTTT	1																																																																															1
GTAAA	2																																																																															2
GTAAC	1																																																																															1
GTAAT	1																																																																															1
GTACA	1																																																																															1
GTACG	1																																																																															1
GTAGA	2																																																																															2
GTATT	3		1																																																																													4
GTCAC	1																																																																															1
GTCCA	1																																																																															1
GTCCG	1																																																																															1
GTCTA	1																																																																															1
GTGAG	2																																																																															2
GTGAT	1																																																																															1
GTGTA		1																																																																														1
GTGTT	1																																																																															1
GTTAA		1																																																																														1
GTTAC	1																																																																															1
GTTAG	12	6	3	1	3	1		3	2		1	2	2																																																																			36
GTTAT	1																																																																															1
GTTCC		1																																																																														1
GTTCG		1																																																																														1
GTTTA		1																																																																														1
GTTTC	3																																																																															3
GTTTG	2																																																																															2
GTTTT	6																																																																															6
TAAAA	30																																																																															30
TAAAC	2																																																																															2
TAAAG	3																																																																															3
TAAAT	16	2																																																																														18
TAACA	3																																																																															3
TAACC	9	3	3			1	2	1	2		1		1																																																																			23
TAACG	2																																																																															2
TAACT	1																																																																															1
TAAGG	1																																																																															1
TAATA	11																																																																															11
TAATC	1	2																																																																														3
TAATG	1																																																																															1
TAATT	18	1																																																																														19
TACAA	9	2																																																																														11
TACAC	5																																																																															5
TACAG	1	1																																																																														2
TACAT	1																																																																															1
TACGA	3																																																																															3
TACGT	1																																																																															1
TACTA	1																																																																															1
TACTC	2																																																																															2
TACTT	1																																																																															1
TAGAA	3	1																																																																														4
TAGAC	2																																																																															2
TAGAG	3																																																																															3
TAGAT	1																																																																															1
TAGCA	1																																																																															1
TAGGT	5	3			1		2	1	1		2		2																																																																			17
TAGTA	2	1		1																																																																												4
TAGTT	1																																																																															1
TATAA	10	1	1																																																																													12
TATAC	1																																																																															1
TATAG	2																																																																															2
TATAT	16																																																																															16
TATCA	4																																																																															4
TATCC	4																																																																															4
TATCG	2																																																																															2
TATGG	2																																																																															2
TATGT	1																																																																															1
TATTA	15	3																																																																														18
TATTC	4																																																																															4
TATTG	4																																																																															4
TATTT	37	1																																																																														38
TCAAA	6	1																																																																														7
TCAAT	3																																																																															3
TCACG	1	1																																																																														2
TCATA	1																																																																															1
TCATC	1																																																																															1
TCATT	3																																																																															3
TCCAC	2																																																																															2
TCCAT	3																																																																															3
TCCGA				1																																																																												1
TCCTA	1																																																																															1
TCCTT	3																																																																															3
TCTAA	3																																																																															3
TCTAC		2																																																																														2
TCTCC	1																																																																															1
TCTCT	2																																																																															2
TCTGA	5	1																																																																														6
TCTGG	1																																																																															1
TCTTA		1																																																																														1
TCTTC	3																																																																															3
TCTTG	2																																																																															2
TCTTT	7																																																																															7
TGAAA	5																																																																															5
TGAAG		1																																																																														1
TGAAT	4																																																																															4
TGACG		1																																																																														1
TGATA	1																																																																															1
TGATC	4											1																																																																				5
TGATG	2																																																																															2
TGATT	5	1																																																																														6
TGCAC		1																																																																														1
TGCAT	1	1																																																																														2
TGCTG	1																																																																															1
TGCTT	1																																																																															1
TGGAA	2	1																																																																														3
TGGAC	1																																																																															1
TGGAT	1																																																																															1
TGGCA	1																																																																															1
TGGGT	1																																																																															1
TGGTT	1																																																																															1
TGTAA	4	1																																																																														5
TGTAT	8																																																																															8
TGTCT	1																																																																															1
TGTGA	1																																																																															1
TGTGT	1																																																																															1
TGTTG	2																																																																															2
TGTTT	2																																																																															2
TTAAA	14	1																																																																														15
TTAAG	1																																																																															1
TTAAT	7		1																																																																													8
TTACA	5	1																																																																														6
TTACG	4																																																																															4
TTAGA	1	1																																																																														2
TTAGG	8	4		2	1		4	1	3	1	1	2	1																																																																			28
TTATA	13																																																																															13
TTATG	4																																																																															4
TTATT	20	1																																																																														21
TTCAA	1																																																																															1
TTCAC	1																																																																															1
TTCAG	1																																																																															1
TTCAT	3																																																																															3
TTCCA	1		1																																																																													2
TTCGT	3																																																																															3
TTCTA	6	1																																																																														7
TTCTC	1																																																																															1
TTCTT	9		1																																																																													10
TTGAA	1																																																																															1
TTGAC	2																																																																															2
TTGAT	2	1																																																																														3
TTGCA	1																																																																															1
TTGCC	1																																																																															1
TTGTA	9	7	2	1																																																																												19
TTGTC	1																																																																															1
TTGTT	1																																																																															1
TTTAA	38	1																																																																														39
TTTAC	1																																																																															1
TTTAG	1																																																																															1
TTTAT	29	1																																																																														30
TTTCA	3																																																																															3
TTTCC	3	2																																																																														5
TTTCT	12																																																																															12
TTTGA	9		1																																																																													10
TTTGC	1																																																																															1
TTTGT	2																																																																															2
TTTTA	46	4			1																																																																											51
TTTTC	10	3																																																																														13
TTTTG	3																																																																															3
AAAAAG	1																																																																															1
AAAAAT	2																																																																															2
AAAATA	4																																																																															4
AAAATT	4																																																																															4
AAACAT	2																																																																															2
AAACGG	1																																																																															1
AAAGCT	1																																																																															1
AAAGGA	1																																																																															1
AAAGGG		2			1																																																																											3
AAATAA	1																																																																															1
AAATGT	1																																																																															1
AAATTA	1																																																																															1
AAATTT	1																																																																															1
AACCAA	1																																																																															1
AACCAC	1																																																																															1
AACCGC	5																																																																															5
AACCTA	1																																																																															1
AACGTA	1																																																																															1
AACTGA	1																																																																															1
AAGAAA	1																																																																															1
AAGATG	1																																																																															1
AAGCAG	1																																																																															1
AAGCTC	1																																																																															1
AAGGAC		1																																																																														1
AAGGGA							1																																																																									1
AAGTGT	1																																																																															1
AATAAC	1																																																																															1
AATGTC	6																																																																															6
AATTAA	1																																																																															1
AATTAC	1																																																																															1
AATTAT	1																																																																															1
AATTCA	1																																																																															1
AATTCT	1																																																																															1
AATTTT	3	1																																																																														4
ACAGGG	1					1				1																																																																						3
ACAGTA	1																																																																															1
ACAGTG	1	1	1																																																																													3
ACCAGT	1																																																																															1
ACCGAC	1																																																																															1
ACGACA	1	1																																																																														2
ACGATC	1																																																																															1
ACGCAG			1																																																																													1
ACGCCA			1																																																																													1
ACGTAT	1																																																																															1
ACTAGA	1																																																																															1
ACTCTA	1																																																																															1
ACTGTC	4		1																																																																													5
AGAAAA	1																																																																															1
AGAAGG	3		1																																																																													4
AGAGAA	1																																																																															1
AGATAA									1																																																																							1
AGCAAC	1																																																																															1
AGCAGT	1																																																																															1
AGCCTT	1																																																																															1
AGCGAC	1																																																																															1
AGCGTC	1		1																																																																													2
AGGAAG	1																																																																															1
AGGCCT	1																																																																															1
AGGGAA	1																																																																															1
AGTAAT	1																																																																															1
AGTCAT		1																																																																														1
AGTCGC	1																																																																															1
AGTGAC	3																																																																															3
AGTGGT	1																																																																															1
AGTTGC	1																																																																															1
AGTTTT	1																																																																															1
ATAAAG	1																																																																															1
ATAAAT	2																																																																															2
ATAACG	1																																																																															1
ATAATT	1																																																																															1
ATAGGT	1																																																																															1
ATATAC											1																																																																					1
ATCAAC	1																																																																															1
ATCACT		1																																																																														1
ATCAGC			1																																																																													1
ATCATT	1																																																																															1
ATCCTC						1																																																																										1
ATCGAA	1																																																																															1
ATCTAG	1																																																																															1
ATGACT		1																																																																														1
ATGTTG	1																																																																															1
ATTAAA	1																																																																															1
ATTAGT	1																																																																															1
ATTATA	2																																																																															2
ATTATG	1																																																																															1
ATTCGG	1																																																																															1
ATTCTC	1																																																																															1
ATTGAC	1	1																																																																														2
ATTGTC	1																																																																															1
ATTTAA	1																																																																															1
ATTTCT	1																																																																															1
ATTTGA	1																																																																															1
ATTTGT	1										1																																																																					2
ATTTTA	1																																																																															1
ATTTTT	3																																																																															3
CAAGGA		2																																																																														2
CAATAA	1																																																																															1
CACTTC					1				2																																																																							3
CAGCAA	1																																																																															1
CAGCGA	1																																																																															1
CAGCTA	1																																																																															1
CAGCTT	1																																																																															1
CAGTCG		1																																																																														1
CATCCT	1																																																																															1
CATTAT	1																																																																															1
CCACGC	2																																																																															2
CCAGAT	1																																																																															1
CCCACG	1																																																																															1
CCCGCA	1																																																																															1
CCGATG			1																																																																													1
CCGCAC		1																																																																														1
CCGCTG	1																																																																															1
CCTATT	1																																																																															1
CCTCTC	1																																																																															1
CCTGTC							1																																																																									1
CCTTGT			1																																																																													1
CGCAGA			1																																																																													1
CGCAGT		1																																																																														1
CGCCCG		1																																																																														1
CGCGCA	3																																																																															3
CGCGGA	2																																																																															2
CGTGCT	1																																																																															1
CTACGA	1																																																																															1
CTATAT	1																																																																															1
CTCAGA	1																																																																															1
CTCAGT	1																																																																															1
CTCCTA	1																																																																															1
CTCCTT	1																																																																															1
CTCTAG		1																																																																														1
CTCTCA	1																																																																															1
CTCTTC	1	2																																																																														3
CTCTTT	1																																																																															1
CTGAAA							1																																																																									1
CTGTCA	5	2																																																																														7
CTGTTC	1																																																																															1
CTTCCA	1																																																																															1
CTTCGG	2																																																																															2
CTTCTC	2																																																																															2
CTTGTA	1																																																																															1
CTTGTC		1	2	2						1																																																																						6
CTTTAA	1																																																																															1
CTTTAC	1																																																																															1
CTTTCC	1																																																																															1
CTTTCT	1																																																																															1
GAAACT	1																																																																															1
GAAATA	1																																																																															1
GAAGCC	1																																																																															1
GAAGGA	3																																																																															3
GAAGGT	1																																																																															1
GAATTT	1																																																																															1
GACAAG	1																																																																															1
GACAGG					1																																																																											1
GACAGT	1																																																																															1
GAGAAA	1																																																																															1
GAGAAC	1																																																																															1
GAGAAG	1																																																																															1
GAGACG								1																																																																								1
GAGCTG	1																																																																															1
GAGGAA	2																																																																															2
GAGGCG		1																																																																														1
GAGTGA						1																																																																										1
GATAGG	1									1																																																																						2
GCACGC	1																																																																															1
GCAGTC		1																																																																														1
GCATGG	1																																																																															1
GCCCAC		1																																																																														1
GCCGAA	2																																																																															2
GCGACT		1																																																																														1
GCGCGG			1																																																																													1
GCGGGG	1																																																																															1
GCGTCC	1																																																																															1
GCGTGT								1																																																																								1
GCTAAA				1																																																																												1
GCTACA	1																																																																															1
GCTCCA	1																																																																															1
GCTGAA	1																																																																															1
GCTGAC	1																																																																															1
GGAAAG		1																																																																														1
GGACAG					1					1																																																																						2
GGCCGT	1																																																																															1
GGCGAA	1																																																																															1
GGCGAC	1																																																																															1
GGCGTT			1																																																																													1
GGGATA	1																																																																															1
GGGGAA	1																																																																															1
GGTGTG	2																																																																															2
GGTTAC	1																																																																															1
GGTTGC		1																																																																														1
GTACTA	1																																																																															1
GTAGGT	1																																																																															1
GTCACA	3																																																																															3
GTCACT	1																																																																															1
GTCCCC	1																																																																															1
GTCCCT							1																																																																									1
GTCGCA	2																																																																															2
GTCTAG	1																																																																															1
GTCTCC				1																																																																												1
GTCTCT	1																																																																															1
GTCTGC				1																																																																												1
GTCTGT	1	1																																																																														2
GTCTTA	1																																																																															1
GTGACA	2	1																																																																														3
GTGACT	1																																																																															1
GTGCCA	1																																																																															1
GTGTCT				1																																																																												1
GTGTGA	1																																																																															1
GTTATA	1																																																																															1
GTTCCC	1																																																																															1
GTTGAC	1																																																																															1
GTTGCG	1																																																																															1
GTTTCG	2																																																																															2
TAAAAA	3																																																																															3
TAAAAC		1																																																																														1
TAAAAT	1																																																																															1
TAATGA	1																																																																															1
TAATTA	2																																																																															2
TAATTT	1																																																																															1
TACTTT	3	1																																																																														4
TATAAT	1																																																																															1
TATACA	1																																																																															1
TATATG	1																																																																															1
TATCAT	1																																																																															1
TATCTT	1																																																																															1
TATGGA			1																																																																													1
TATTAA	1																																																																															1
TATTTG	1																																																																															1
TCAAAA	1																																																																															1
TCAAAC	1																																																																															1
TCAATC	1																																																																															1
TCAGGA	1																																																																															1
TCATCT	1																																																																															1
TCATTA	1																																																																															1
TCATTT	1																																																																															1
TCCGTC		1																																																																														1
TCCTCA									1		1																																																																					2
TCCTTC		1																																																																														1
TCCTTG				1	1																																																																											2
TCGCTG				1																																																																												1
TCGGTC						1																																																																										1
TCTAGA	1																																																																															1
TCTCCT	9																																																																															9
TCTCTG	2	1		1																																																																												4
TCTCTT	2					1																																																																										3
TCTGCC	1																																																																															1
TCTGTC	1		1			2																																																																										4
TCTGTG				1																																																																												1
TCTTCC	4					1			1																																																																							6
TCTTTC		2																																																																														2
TCTTTG	1																																																																															1
TGAAAC	2																																																																															2
TGACAG	8	1			1																																																																											10
TGACAT	1			1																																																																												2
TGATGG	2																																																																															2
TGATTC		1																																																																														1
TGCGCG	1																																																																															1
TGCGGT	1																																																																															1
TGGACT			1																																																																													1
TGGCCT	1																																																																															1
TGGTGA	1																																																																															1
TGTACT	1																																																																															1
TGTCAA	3																																																																															3
TGTCAC	2																																																																															2
TGTCAG	1																																																																															1
TGTCAT	1																																																																															1
TGTCCT		1																																																																														1
TGTCGC									1																																																																							1
TGTCTC						1																																																																										1
TGTCTG	1	1		1																																																																												3
TGTGTC	1		1																																																																													2
TGTTTG	1																																																																															1
TTAAAA	4																																																																															4
TTACAC		1																																																																														1
TTACAT	1																																																																															1
TTAGAT	1																																																																															1
TTAGTA	1																																																																															1
TTATAA	1																																																																															1
TTATCA	1																																																																															1
TTATTT	1																																																																															1
TTCACC	1																																																																															1
TTCGGC	1																																																																															1
TTCTAT	1																																																																															1
TTCTCC	2																																																																															2
TTCTGT			1																																																																													1
TTCTTA	1																																																																															1
TTGACA	5	1																																																																														6
TTGATA	1																																																																															1
TTGCAC	1																																																																															1
TTGCGG	1																																																																															1
TTGTAG						1																																																																										1
TTGTCC								1		1																																																																						2
TTTAAT	3																																																																															3
TTTATT	2																																																																															2
TTTCAA	1																																																																															1
TTTCTC	4																																																																															4
TTTGGA							1																																																																									1
TTTGTA	1																																																																															1
TTTTAA	5																																																																															5
TTTTAC		1																																																																														1
TTTTAT	3																																																																															3
TTTTCC						1																																																																										1
TTTTGA	1																																																																															1
TTTTGT	1																																																																															1
TTTTTA	3																																																																															3
TTTTTC	1																																																																															1
TTTTTG	1																																																																															1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	88	59	45	48	32	36	20	20	11	16	16	8	9	8	5	8	5	4	4	1	3	6	3	5	2	2	6	5	2	2	3	3		2	2	3					3	1				2	3	1	1	5	1	3		1	1	2	2	1				1	520
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	12	9	8	3	3	8	1	3	2	2	1	1	1	5	2	2	5	1	1	1	2	2	3		1	1	1		1	1	1	3		2			1			1																							91
AC/GT	-	-	-	168	95	60	39	28	15	9	9	8	6	7	2		2	1		1	2		1	2		1		1			1																																																	458
AG/CT	-	-	-	367	202	108	57	38	19	28	11	11	3	3	3	2	1					2					1																																																					856
AT/AT	-	-	-	488	181	116	86	53	50	28	25	17	12	5	2		1	1		2																																																												1067
CG/CG	-	-	-	16	2	1	1																																																																									20
AAC/GTT	-	-	21	11	3																																																																											35
AAG/CTT	-	-	50	12	3	1																																																																										66
AAT/ATT	-	-	157	21	2																																																																											180
ACC/GGT	-	-	12	3	1		1																																																																									17
ACG/CGT	-	-	6	5																																																																												11
ACT/AGT	-	-	19	2		3		1					1																																																																			26
AGC/CTG	-	-	10	1		1																																																																										12
AGG/CCT	-	-	8	2																																																																												10
ATC/ATG	-	-	110	35	17	2	8	6			1		1																																																																			180
CCG/CGG	-	-	14	1	1		1																																																																									17
AAAC/GTTT	-	76	12	2	1		1																																																																									92
AAAG/CTTT	-	107	42	12	1					1						1																																																																164
AAAT/ATTT	-	270	35	4	1								1																																																																			311
AACC/GGTT	-	4		1																																																																												5
AACG/CGTT	-	3	2	1		1		1																																																																								8
AACT/AGTT	-	6	1	1																																																																												8
AAGC/CTTG	-	5																																																																														5
AAGG/CCTT	-	13	2																																																																													15
AAGT/ACTT	-	4	1																																																																													5
AATC/ATTG	-	17	5	2																																																																												24
AATG/ATTC	-	142	46	13	7	2	1							1																																																																		212
AATT/AATT	-	45	7		1																																																																											53
ACAG/CTGT	-	287	47	11	7	4	2	1	3				1					1																																																														364
ACAT/ATGT	-	238	41	10	5	2	1																																																																									297
ACCC/GGGT	-	2																																																																														2
ACCG/CGGT	-	8	3	1																																																																												12
ACCT/AGGT	-	7	4				2																																																																									13
ACGC/CGTG	-	1																																																																														1
ACGG/CCGT	-	7	2																																																																													9
ACGT/ACGT	-	2																																																																														2
ACTC/AGTG	-	13	6						3																																																																							22
ACTG/AGTC	-	9	2																																																																													11
AGAT/ATCT	-	23	1	1		1	1																																																																									27
AGCC/CTGG	-		1																																																																													1
AGCG/CGCT	-	7																																																																														7
AGCT/AGCT	-		1																																																																													1
AGGC/CCTG	-																	1																																																														1
AGGG/CCCT	-	1																																																																														1
ATCC/ATGG	-	42	13	2	2	1	1																																																																									61
ATGC/ATGC	-	3																																																																														3
AAAAC/GTTTT	31	1																																																																														32
AAAAG/CTTTT	68	6	1																																																																													75
AAAAT/ATTTT	320	9	1	1	1																																																																											332
AAACC/GGTTT	4																																																																															4
AAACG/CGTTT	9																																																																															9
AAACT/AGTTT	16	2																																																																														18
AAAGC/CTTTG	7																																																																															7
AAAGG/CCTTT	17	2						1	1																																																																							21
AAAGT/ACTTT	11	1																																																																														12
AAATC/ATTTG	48	4	1																																																																													53
AAATG/ATTTC	28	2																																																																														30
AAATT/AATTT	204	12	1																																																																													217
AACAC/GTGTT	8			1																																																																												9
AACAG/CTGTT	7	1																																																																														8
AACAT/ATGTT	15																																																																															15
AACCC/GGGTT	9	1																																																																														10
AACCG/CGGTT	3	1																																																																														4
AACCT/AGGTT	117	50	18	14	11	11	16	15	16	6	8	7	9																																																																			298
AACGC/CGTTG	1																																																																															1
AACGG/CCGTT	1	1																																																																														2
AACGT/ACGTT	13	1											1																																																																			15
AACTC/AGTTG	4																																																																															4
AACTG/AGTTC	4																																																																															4
AACTT/AAGTT	7	1																																																																														8
AAGAC/CTTGT	7																																																																															7
AAGAG/CTCTT	14																																																																															14
AAGAT/ATCTT	4	1																																																																														5
AAGCC/CTTGG	2	1																																																																														3
AAGCG/CGCTT	16																																																																															16
AAGCT/AGCTT	1																																																																															1
AAGGC/CCTTG	2																																																																															2
AAGGG/CCCTT	1																																																																															1
AAGGT/ACCTT	4																																																																															4
AAGTC/ACTTG	4																																																																															4
AAGTG/ACTTC	8	1																																																																														9
AATAC/ATTGT	57	10	4	1																																																																												72
AATAG/ATTCT	24	2																																																																														26
AATAT/ATATT	367	12	2																																																																													381
AATCC/ATTGG	7																																																																															7
AATCG/ATTCG	7			1				1																																																																								9
AATCT/AGATT	13	3																																																																														16
AATGC/ATTGC	6	1																																																																														7
AATGG/ATTCC	13	3	2	2																																																																												20
AATGT/ACATT	22	2		1																																																																												25
AATTC/AATTG	18																																																																															18
ACACT/AGTGT	5	1																																																																														6
ACAGC/CTGTG	2																																																																															2
ACAGG/CCTGT	1			1																																																																												2
ACAGT/ACTGT	7	2																																																																														9
ACATC/ATGTG	7	1																																																																														8
ACATG/ATGTC	1	1																																																																														2
ACCAG/CTGGT	3																																																																															3
ACCAT/ATGGT	4																																																																															4
ACCCC/GGGGT	1																																																																															1
ACCCT/AGGGT	1																																																																															1
ACCGC/CGGTG	1																																																																															1
ACCGG/CCGGT	5																																																																															5
ACCGT/ACGGT	1																																																																															1
ACCTC/AGGTG	5																																																																															5
ACCTG/AGGTC	1																																																																															1
ACGAG/CGTCT	2																																																																															2
ACGAT/ATCGT	7																																																																															7
ACGCG/CGCGT	3																																																																															3
ACGCT/AGCGT	2																																																																															2
ACGGC/CCGTG	1																																																																															1
ACGTC/ACGTG	6	2		1																																																																												9
ACTAG/AGTCT	6																																																																															6
ACTAT/AGTAT	14	1		1																																																																												16
ACTCC/AGTGG	9	1																																																																														10
ACTCG/AGTCG	4																																																																															4
ACTCT/AGAGT	14	2																																																																														16
ACTGC/AGTGC		1																																																																														1
ACTGG/AGTCC	3																																																																															3
AGAGC/CTCTG	1																																																																															1
AGAGG/CCTCT	3	2																																																																														5
AGATC/ATCTG	12	3	1	1								1																																																																				18
AGATG/ATCTC	3																																																																															3
AGCAT/ATGCT	3																																																																															3
AGCCG/CGGCT	1																																																																															1
AGCGC/CGCTG	1																																																																															1
AGCTC/AGCTG	2																																																																															2
AGGAT/ATCCT	14																																																																															14
AGGCG/CCTCG	1																																																																															1
ATATC/ATATG	14																																																																															14
ATCCC/ATGGG	5																																																																															5
ATCCG/ATCGG	2			1																																																																												3
ATCGC/ATGCG	2																																																																															2
ATGCC/ATGGC	1																																																																															1
CCCCG/CGGGG	1																																																																															1
CCGCG/CGCGG	5																																																																															5
AAAAAC/GTTTTT	2																																																																															2
AAAAAG/CTTTTT	4																																																																															4
AAAAAT/ATTTTT	22																																																																															22
AAAACC/GGTTTT	1																																																																															1
AAAACT/AGTTTT	1	1																																																																														2
AAAAGG/CCTTTT	1					1																																																																										2
AAAAGT/ACTTTT	3	2																																																																														5
AAAATC/ATTTTG	2																																																																															2
AAAATG/ATTTTC	1																																																																															1
AAAATT/AATTTT	25	1																																																																														26
AAACAC/GTGTTT	1																																																																															1
AAACAG/CTGTTT			1																																																																													1
AAACAT/ATGTTT	2																																																																															2
AAACCG/CGGTTT	2																																																																															2
AAACCT/AGGTTT	1																																																																															1
AAACGG/CCGTTT	1																																																																															1
AAACGT/ACGTTT	1																																																																															1
AAACTC/AGTTTG	1																																																																															1
AAACTG/AGTTTC	4						1																																																																									5
AAAGAC/CTTTGT	1																																																																															1
AAAGAG/CTCTTT	10	2				1																																																																										13
AAAGAT/ATCTTT	2								1																																																																							3
AAAGCT/AGCTTT	1			1																																																																												2
AAAGGG/CCCTTT	2	3			1		1																																																																									7
AAAGGT/ACCTTT	1																																																																															1
AAAGTT/AACTTT	1																																																																															1
AAATAC/ATTTGT	3										1																																																																					4
AAATAG/ATTTCT	3																																																																															3
AAATAT/ATATTT	2																																																																															2
AAATCC/ATTTGG							1																																																																									1
AAATCG/ATTTCG	1																																																																															1
AAATCT/AGATTT	1																																																																															1
AAATGT/ACATTT	2																																																																															2
AAATTC/AATTTG	3																																																																															3
AAATTG/AATTTC	1																																																																															1
AAATTT/AAATTT	2																																																																															2
AACAAT/ATTGTT	2																																																																															2
AACAGC/CTGTTG	2																																																																															2
AACAGG/CCTGTT	1																																																																															1
AACAGT/ACTGTT	1																																																																															1
AACATC/ATGTTG	2																																																																															2
AACCAC/GGTTGT	1																																																																															1
AACCGC/CGGTTG	8	1																																																																														9
AACCGT/ACGGTT	1																																																																															1
AACGAC/CGTTGT	1	1																																																																														2
AACGAG/CGTTCT	1																																																																															1
AACGAT/ATCGTT	1																																																																															1
AACGCC/CGTTGG			2																																																																													2
AACGGG/CCCGTT	1																																																																															1
AACGTC/ACGTTG	1																																																																															1
AACTAC/AGTTGT						1																																																																										1
AACTAG/AGTTCT	1																																																																															1
AACTAT/AGTTAT	1																																																																															1
AACTCT/AGAGTT	1																																																																															1
AACTGC/AGTTGC	1																																																																															1
AAGAAT/ATTCTT	1																																																																															1
AAGACT/AGTCTT	1																																																																															1
AAGAGG/CCTCTT	8	2				1			1																																																																							12
AAGATG/ATCTTC	2																																																																															2
AAGCAG/CTGCTT	1																																																																															1
AAGCCG/CGGCTT	6																																																																															6
AAGCTC/AGCTTG	1																																																																															1
AAGCTG/AGCTTC	2																																																																															2
AAGGAC/CCTTGT	1	5	3	3	1			1		2																																																																						16
AAGGAG/CCTTCT	21	1	1																																																																													23
AAGGCC/CCTTGG	1																																																																															1
AAGGCG/CCTTCG	1																																																																															1
AAGGCT/AGCCTT	1																																																																															1
AAGGGG/CCCCTT	1																																																																															1
AAGGTG/ACCTTC	2																																																																															2
AAGTAC/ACTTGT	2																																																																															2
AAGTCC/ACTTGG			1																																																																													1
AAGTGC/ACTTGC	1																																																																															1
AAGTGG/ACTTCC	1				1				2																																																																							4
AAGTGT/ACACTT	1	1																																																																														2
AATACT/AGTATT	2																																																																															2
AATAGG/ATTCCT	1																																																																															1
AATAGT/ACTATT	1																																																																															1
AATATC/ATATTG	1																																																																															1
AATATT/AATATT	1																																																																															1
AATCAG/ATTCTG		1																																																																														1
AATCAT/ATGATT	1																																																																															1
AATCCG/ATTCGG	1																																																																															1
AATCTC/AGATTG	1																																																																															1
AATGAC/ATTGTC	2																																																																															2
AATGAG/ATTCTC	1																																																																															1
AATGAT/ATCATT	6																																																																															6
AATGTC/ACATTG	16	2		1																																																																												19
AATTAC/AATTGT	1																																																																															1
AATTAG/AATTCT	1																																																																															1
AATTAT/AATTAT	8																																																																															8
ACACAG/CTGTGT	3	2	1	3																																																																												9
ACACCC/GGGTGT	2																																																																															2
ACACCG/CGGTGT	1																																																																															1
ACACCT/AGGTGT	1																																																																															1
ACACGC/CGTGTG								1																																																																								1
ACACTC/AGTGTG	1																																																																															1
ACACTG/AGTGTC	1																																																																															1
ACAGAG/CTCTGT	4	1	1	1		3																																																																										10
ACAGCG/CGCTGT	2			1					1																																																																							4
ACAGCT/AGCTGT	2																																																																															2
ACAGGG/CCCTGT	1				2	1	2			2																																																																						8
ACAGTC/ACTGTG	4																																																																															4
ACAGTG/ACTGTC	27	5	2		1																																																																											35
ACATAT/ATATGT	2										1																																																																					3
ACCACT/AGTGGT	1																																																																															1
ACCAGT/ACTGGT	1																																																																															1
ACCATC/ATGGTG	3																																																																															3
ACCCGC/CGGGTG	1	1																																																																														2
ACCGAG/CGGTCT						1																																																																										1
ACCTAG/AGGTCT	1																																																																															1
ACCTAT/AGGTAT	1																																																																															1
ACGACT/AGTCGT	1																																																																															1
ACGAGC/CGTGCT	1																																																																															1
ACGATC/ATCGTG	1																																																																															1
ACGCAG/CGTCTG			2	1																																																																												3
ACGCCC/CGTGGG	3	1																																																																														4
ACGCGC/CGCGTG	5																																																																															5
ACGCGG/CCGCGT	3																																																																															3
ACGCTG/AGCGTC	2		1																																																																													3
ACGGAG/CCGTCT		1		1				1																																																																								3
ACGGCC/CCGTGG	1																																																																															1
ACGGCG/CCGTCG	1																																																																															1
ACGGGG/CCCCGT	1																																																																															1
ACGTAT/ACGTAT	1																																																																															1
ACTAGT/ACTAGT	1																																																																															1
ACTATC/AGTGAT		1																																																																														1
ACTATG/AGTCAT		2																																																																														2
ACTCAG/AGTCTG	1																																																																															1
ACTCCT/AGGAGT	1																																																																															1
ACTCTC/AGAGTG	1					1																																																																										2
ACTGAG/AGTCTC	1																																																																															1
ACTGCG/AGTCGC	3	4																																																																														7
ACTGCT/AGCAGT	1																																																																															1
ACTGGC/AGTGCC	1																																																																															1
AGAGCT/AGCTCT		1																																																																														1
AGAGGC/CCTCTG	1																																																																															1
AGAGGG/CCCTCT	1																																																																															1
AGATAT/ATATCT	1																																																																															1
AGATCC/ATCTGG	1																																																																															1
AGATCT/AGATCT	2																																																																															2
AGCATC/ATGCTG			1																																																																													1
AGCGGC/CCGCTG	1																																																																															1
AGCTCC/AGCTGG	2																																																																															2
AGGATC/ATCCTG	1																																																																															1
AGGATG/ATCCTC	1					1			1		1																																																																					4
AGGCCT/AGGCCT	1																																																																															1
AGGCGG/CCGCCT		1																																																																														1
AGGGAT/ATCCCT	2									1																																																																						3
ATATCC/ATATGG			1																																																																													1
ATCGGC/ATGCCG			1																																																																													1
ATGCCC/ATGGGC	1																																																																															1
CCCCCG/CGGGGG	1																																																																															1
CCCGCG/CGCGGG		1	1																																																																													2
