Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018231905.1/fasta/hub_GCA_018231905.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              355773
Total size of examined sequences (bp):           134343666
Total number of identified SSRs:                 17662
Number of SSR containing sequences:              16749
Number of sequences containing more than 1 SSR:  783
Number of SSRs present in compound formation:    641


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	490
2	3134
3	2117
4	4989
5	5982
6	950

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	6	5	10	11		3	3	3	1	2		5	1		1			2				1		1					2	1				1															1							1											76
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	7	8	5	14	4	6	6	5	7		3	7	5	2	2	6	5	2	4		1		2	1		1		2	1	1	1		1							1																											125
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	13	16	14	7	11	10	6	12	10	5	3	3	2	4	6	2	4	4	3	2	1	1	2	1		4	2		1	2		2	1	1		1	1					1																										158
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	11	9	7	10	5	4	2	7	9	4		3	3		2	2	2		1	1	1	1	1	1				1	1	1	1		2	1	2			1	1	1	2				1									1	1	3	3									1	131
AC	-	-	-	137	68	28	28	15	13	7	9	5	4	2		3			2	3	1	1			1	1				1																																																							329
AG	-	-	-	114	56	36	28	14	4	5	2		1		1			1																																																																			262
AT	-	-	-	248	108	60	35	25	15	9	6	5	4	3	1	1	3		2	1																																																																	526
CA	-	-	-	83	39	30	22	13	8	5	2	5	2	1	4	2				1					1					1																																																							219
CG	-	-	-	6				1																																																																													7
CT	-	-	-	75	47	22	13	16	3	3	1																																																																										180
GA	-	-	-	60	28	11	17	6	6		1																																																																										129
GC	-	-	-	12	1			1																																																																													14
GT	-	-	-	102	43	32	20	17	7	4	5	6	3		1	1	1	1		4	1	2	1			1								1		2																																																	255
TA	-	-	-	257	111	56	46	23	18	17	8	6	5	1	2	1	1																																																																				552
TC	-	-	-	97	56	33	20	11	5	5			1																																																																								228
TG	-	-	-	166	96	50	36	21	10	8	9	8	3	5	2	5		5	2			2		1		1	1									1		1																																															433
AAC	-	-	10	3	1																																																																																14
AAG	-	-	31	19	3																																																																																53
AAT	-	-	152	33	8		1	1																																																																													195
ACA	-	-	6	1																																																																																	7
ACC	-	-	1	1																																																																																	2
ACG	-	-	1	1																																																																																	2
ACT	-	-	7	2																																																																																	9
AGA	-	-	116	61	13	7			1																																																																												198
AGC	-	-	6		1	1																																																																															8
AGG	-	-	4	1	1																																																																																6
AGT	-	-	7		2																																																																																9
ATA	-	-	146	34	3	3	1																																																																														187
ATC	-	-	14	2																																																																																	16
ATG	-	-	7	9	1																																																																																17
ATT	-	-	124	31	8	1	2																																																																														166
CAA	-	-	12	2																																																																																	14
CAC	-	-	6	3																																																																																	9
CAG	-	-	7	3																																																																																	10
CAT	-	-	4	2	1																																																																																7
CCA	-	-	1	1																																																																																	2
CCG	-	-	3	2																																																																																	5
CCT	-	-	4																																																																																		4
CGA	-	-	2																																																																																		2
CGC	-	-	5	2						1																																																																											8
CGG	-	-	7		2																																																																																9
CGT	-	-	3	1		1																																																																															5
CTA	-	-	6	3	1																																																																																10
CTC	-	-	1																																																																																		1
CTG	-	-	4	3			1																																																																														8
CTT	-	-	31	16	3	1	1																																																																														52
GAA	-	-	21	3	1			1		1																																																																											27
GAC	-	-	4																																																																																		4
GAG	-	-	9			1	1																																																																														11
GAT	-	-	3		1																																																																																4
GCA	-	-	5	2																																																																																	7
GCC	-	-	7	1	1	1																																																																															10
GCG	-	-	4		3																																																																																7
GCT	-	-	1	2			1																																																																														4
GGA	-	-	2	1				1																																																																													4
GGC	-	-	4	1	2	1	1																																																																														9
GGT	-	-	1					1																																																																													2
GTA	-	-	6	2																																																																																	8
GTC	-	-	1		1																																																																																2
GTG	-	-	2				1																																																																														3
GTT	-	-	4	2	1																																																																																7
TAA	-	-	155	32	6	3	2																																																																														198
TAC	-	-	18	1	2	1																																																																															22
TAG	-	-	7	3		2																																																																															12
TAT	-	-	135	32	10	5	1																																																																														183
TCA	-	-	7																																																																																		7
TCC	-	-			1																																																																																1
TCG	-	-	3	1																																																																																	4
TCT	-	-	79	37	11	7	1																																																																														135
TGA	-	-	14	3	1	1			1																																																																												20
TGC	-	-	4	1	2	1																																																																															8
TGG	-	-	4	2			1																																																																														7
TGT	-	-	12	1	2																																																																																15
TTA	-	-	179	34	5	4		2																																																																													224
TTC	-	-	78	33	8	1	1		1																																																																												122
TTG	-	-	8	6	1																																																																																15
AAAC	-	7				1																																																																															8
AAAG	-	20	3	1																																																																																	24
AAAT	-	254	22	7	2	1											1																																																																				287
AACA	-	11					1																																																																														12
AACC	-	2		1																																																																																	3
AACT	-	2		1																																																																																	3
AAGA	-	24	3							1																																																																											28
AAGC	-	2																																																																																			2
AAGG	-	3		1	1		1		1	2	1	1			1																																																																						12
AAGT	-	13	5																																																																																		18
AATA	-	323	53	8	2																																																																																386
AATC	-	7	2	1																																																																																	10
AATG	-	23	2	1				2																																																																													28
AATT	-	29	5																																																																																		34
ACAA	-	12	2			1																																																																															15
ACAG	-	18	5			1																																																																															24
ACAT	-	27	3	1	1																																																																																32
ACCA	-	3																																																																																			3
ACCG	-	1																																																																																			1
ACCT	-	35	5					1																																																																													41
ACGA	-	1																																																																																			1
ACGC	-		1			1																																																																															2
ACGT	-	7																																																																																			7
ACTA	-	4				1																																																																															5
ACTC	-	2		1																																																																																	3
ACTG	-	8																																																																																			8
ACTT	-	6	1																																																																																		7
AGAA	-	16	9	1																																																																																	26
AGAC	-	4	2																																																																																		6
AGAT	-	6	1																																																																																		7
AGCA	-		1																																																																																		1
AGCG	-	1																																																																																			1
AGCT	-	1																																																																																			1
AGGA	-	2	2	1	2					2																																																																											9
AGGG	-	1																																																																																			1
AGGT	-	46	7	1	1																																																																																55
AGTA	-	10	1		2																																																																																13
AGTC	-	6	1	1																																																																																	8
AGTG	-		1		1			1																																																																													3
AGTT	-	2																																																																																			2
ATAA	-	193	35	5	2						1																																																																										236
ATAC	-	35	3	1			1		1																																																																												41
ATAG	-	9	4		1																																																																																14
ATCA	-	7	2																																																																																		9
ATCC	-	8	1																																																																																		9
ATCT	-	7																																																																																			7
ATGA	-	10		1																																																																																	11
ATGC	-	3	1																																																																																		4
ATGG	-	3		1																																																																																	4
ATGT	-	22	1							1																																																																											24
ATTA	-	26	1																																																																																		27
ATTC	-	16	3	3	1	2	1																																																																														26
ATTG	-	17	2	1																																																																																	20
ATTT	-	175	23	2																																																																																	200
CAAA	-	16	2	1																																																																																	19
CAAG	-	2																																																																																			2
CAAT	-	5	3																																																																																		8
CACG	-	2	1					1																																																																													4
CACT	-	1		1																																																																																	2
CAGA	-	3	2			1																																																																															6
CAGC	-	1																																																																																			1
CAGG	-		1																																																																																		1
CAGT	-	4	1																																																																																		5
CATA	-	15	1																																																																																		16
CATC	-	14	3																																																																																		17
CATG	-	2																																																																																			2
CATT	-	7	1		1		1																																																																														10
CCAA	-	2																																																																																			2
CCAG	-	1																																																																																			1
CCAT	-	4	3		1																																																																																8
CCGA	-	1																																																																																			1
CCGT	-	1																																																																																			1
CCTA	-	29	1																																																																																		30
CCTG	-	3																																																																																			3
CCTT	-	3	4							1							1																																																																				9
CGAC	-	1	1																																																																																		2
CGCA	-		1					1																																																																													2
CGGA	-		1																																																																																		1
CGTC	-	1	2																																																																																		3
CGTG	-	1																																																																																			1
CGTT	-	1																																																																																			1
CTAA	-	2	1																																																																																		3
CTAC	-	53	8	2	2																																																																																65
CTAG	-	2																																																																																			2
CTAT	-	2	1																																																																																		3
CTGA	-		1																																																																																		1
CTGC	-	1																																																																																			1
CTGG	-	1																																																																																			1
CTGT	-	8	2								1																																																																										11
CTTA	-	3	1																																																																																		4
CTTC	-	4	2	1		1	2	2	1	1	1	1																																																																									16
CTTG	-	4																																																																																			4
CTTT	-	14	2	1																																																																																	17
GAAA	-	18	5	1	1																																																																																25
GAAC	-		1																																																																																		1
GAAG	-	5		1	1			2				1																																																																									10
GAAT	-	5	2																																																																																		7
GACA	-	7	1								1		1																																																																								10
GACG	-	5	2																																																																																		7
GACT	-	3																																																																																			3
GAGC	-	1																																																																																			1
GAGT	-							1																																																																													1
GATA	-	11	2																																																																																		13
GATC	-	3																																																																																			3
GATG	-	28	4	1																																																																																	33
GATT	-	3																																																																																			3
GCAC	-	1	1			1																																																																															3
GCAG	-	1																																																																																			1
GCAT	-	3																																																																																			3
GCCT	-	1																																																																																			1
GCGA	-	1																																																																																			1
GCGT	-	3																																																																																			3
GCTG	-	1																																																																																			1
GCTT	-	3																																																																																			3
GGAA	-	3	1	1			1			1		1				1	1																																																																				10
GGAC	-	2	1																																																																																		3
GGAT	-	4																																																																																			4
GGCA	-	1																																																																																			1
GGCG	-	2																																																																																			2
GGTA	-	48	9	1	1																																																																																59
GGTC	-	1																																																																																			1
GGTG	-	1																																																																																			1
GGTT	-	4																																																																																			4
GTAA	-	7																																																																																			7
GTAC	-	3																																																																																			3
GTAG	-	98	19		1	2																																																																															120
GTAT	-	15	2	1					2																																																																												20
GTCA	-	1		1																																																																																	2
GTCC	-	2	2																																																																																		4
GTCG	-	2	1																																																																																		3
GTCT	-	4																																																																																			4
GTGC	-	5	2	1																																																																																	8
GTTA	-	3	1																																																																																		4
GTTC	-	3	1																																																																																		4
GTTG	-	4								1																																																																											5
GTTT	-	16	1			1																																																																															18
TAAA	-	312	41	5	2	1																																																																															361
TAAC	-	3																																																																																			3
TAAG	-	6	1																																																																																		7
TAAT	-	14	2	1																																																																																	17
TACA	-	49	9	2																																																																																	60
TACC	-	139	21	5																																																																																	165
TACG	-	3																																																																																			3
TACT	-	20					1																																																																														21
TAGA	-	16	1	1		1																																																																															19
TAGC	-	1																																																																																			1
TAGG	-	83	15																																																																																		98
TAGT	-	2																																																																																			2
TATC	-	15	8	2																																																																																	25
TATG	-	42	9	2																																																																																	53
TATT	-	357	50	7	4	1		2	1																																																																												422
TCAA	-	7	1																																																																																		8
TCAC	-	3																																																																																			3
TCAG	-	7	1																																																																																		8
TCAT	-	16	4	2		1																																																																															23
TCCA	-	16	4																																																																																		20
TCCC	-	1	1																																																																																		2
TCCG	-	1	1																																																																																		2
TCCT	-	2								1		1																																																																									4
TCGC	-	1																																																																																			1
TCTA	-	9	1																																																																																		10
TCTG	-	11	3	1	1																																																																																16
TCTT	-	8	3	1			1																																																																														13
TGAA	-	10	4	5		1	1											1																																																																			22
TGAC	-	9	1																																																																																		10
TGAG	-	3																																																																																			3
TGAT	-	9	1	1																																																																																	11
TGCA	-	4																																																																																			4
TGCG	-	3				2																																																																															5
TGCT	-	1	1																																																																																		2
TGGA	-	6	1	1																																																																																	8
TGGT	-		1																																																																																		1
TGTA	-	46	5	2			1		1																																																																												55
TGTC	-	17	2																																																																																		19
TGTT	-	16	2																																																																																		18
TTAA	-	23	5																																																																																		28
TTAC	-	8																																																																																			8
TTAG	-	2	1																																																																																		3
TTAT	-	359	38	6			2		1																																																																												406
TTCA	-	15	5		1	2																																																																															23
TTCC	-	3	2	2	2	1			3	1	2																																																																										16
TTCG	-	1	1																																																																																		2
TTCT	-	36	8	2	1																																																																																47
TTGA	-	6	1																																																																																		7
TTGC	-	3																																																																																			3
TTGG	-	4		1																																																																																	5
TTGT	-	10																																																																																			10
TTTA	-	279	54	4	3			1	1																																																																												342
TTTC	-	51	7	6											1			1																																																																			66
TTTG	-	21	1	1																																																																																	23
AAAAC	20	1		1																																																																																	22
AAAAG	13																																																																																				13
AAAAT	125	2																																																																																			127
AAACA	13	1																																																																																			14
AAACC	4																																																																																				4
AAACG	1																																																																																				1
AAACT	10	1																																																																																			11
AAAGA	7																																																																																				7
AAAGC	5																																																																																				5
AAAGG	1																																																																																				1
AAAGT	6																																																																																				6
AAATA	120	4	1																																																																																		125
AAATC	23	4	1																																																																																		28
AAATG	22	1																																																																																			23
AAATT	64	4	1																																																																																		69
AACAA	6																																																																																				6
AACAC	2																																																																																				2
AACAG	5																																																																																				5
AACAT	2		1																																																																																		3
AACCA	6																																																																																				6
AACCG	2																																																																																				2
AACCT	16	2	2					3	2				1																																																																								26
AACGA	2																																																																																				2
AACGT	8	1																																																																																			9
AACTA	3	1																																																																																			4
AACTC	2																																																																																				2
AACTG	6																																																																																				6
AACTT	3	1																																																																																			4
AAGAA	8																																																																																				8
AAGAC	1																																																																																				1
AAGAG	4																																																																																				4
AAGAT	1	2																																																																																			3
AAGCA	2																																																																																				2
AAGCT	3																																																																																				3
AAGGT	8																																																																																				8
AAGTA	5	2																																																																																			7
AAGTG	1																																																																																				1
AAGTT	1																																																																																				1
AATAA	112	12																																																																																			124
AATAC	21	1	1	1																																																																																	24
AATAG	6	1																																																																																			7
AATAT	26																																																																																				26
AATCA	29																																																																																				29
AATCC	2																																																																																				2
AATCG	2	2	1																																																																																		5
AATCT	9																																																																																				9
AATGA	22	1		1																																																																																	24
AATGC	5																																																																																				5
AATGG	4	2	1																																																																																		7
AATGT	14																																																																																				14
AATTA	47	1		1																																																																																	49
AATTC	47	9																																																																																			56
AATTG	37	2	1	1																																																																																	41
AATTT	59	4	4																																																																																		67
ACAAA	8		1																																																																																		9
ACAAC	10																																																																																				10
ACAAG	4																																																																																				4
ACAAT	10	1																																																																																			11
ACACA	8																																																																																				8
ACACG	5																																																																																				5
ACACT	5				1																																																																																6
ACAGA	3																																																																																				3
ACAGC	1																																																																																				1
ACAGG	2																																																																																				2
ACAGT	5																																																																																				5
ACATA	6																																																																																				6
ACATC	3	1																																																																																			4
ACATG	2	1																																																																																			3
ACATT	8			1																																																																																	9
ACCAA	3																																																																																				3
ACCAC	3																																																																																				3
ACCAT	3	1					1																																																																														5
ACCCA	2																																																																																				2
ACCCG	1																																																																																				1
ACCCT	1																																																																																				1
ACCGG	1																																																																																				1
ACCGT	1																																																																																				1
ACCTA	21	2	4	1			1	1	1	3	1		1																																																																								36
ACCTC	2	1																																																																																			3
ACCTG	2																																																																																				2
ACCTT			1																																																																																		1
ACGAA	2																																																																																				2
ACGAG	2																																																																																				2
ACGAT	5																																																																																				5
ACGCC	1																																																																																				1
ACGCT	3																																																																																				3
ACGGA	1																																																																																				1
ACGGC	1																																																																																				1
ACGTA	3																																																																																				3
ACGTC	4																																																																																				4
ACGTG	4	1																																																																																			5
ACGTT	1																																																																																				1
ACTAA	8	1																																																																																			9
ACTAC	6																																																																																				6
ACTAG	4																																																																																				4
ACTAT	7	1					1																																																																														9
ACTCA	3																																																																																				3
ACTCC	1																																																																																				1
ACTCG	1																																																																																				1
ACTCT	2	2																																																																																			4
ACTGA	6	1																																																																																			7
ACTGC	1																																																																																				1
ACTGG	2																																																																																				2
ACTGT	5																																																																																				5
ACTTA	4																																																																																				4
ACTTC	1																																																																																				1
ACTTG	2																																																																																				2
ACTTT	6																																																																																				6
AGAAA	7	1																																																																																			8
AGAAC	2		1																																																																																		3
AGAAG	4																																																																																				4
AGAAT	2																																																																																				2
AGACA	7			1																																																																																	8
AGACG	2																																																																																				2
AGACT	3																																																																																				3
AGAGA	3		1																																																																																		4
AGAGC	1																																																																																				1
AGAGG		1																																																																																			1
AGATA	2																																																																																				2
AGATC	1																																																																																				1
AGATG	6																																																																																				6
AGATT	5		1																																																																																		6
AGCAA	3																																																																																				3
AGCAC	2																																																																																				2
AGCAG	1																																																																																				1
AGCAT	4																																																																																				4
AGCCG	1																																																																																				1
AGCCT	3																																																																																				3
AGCGG	1																																																																																				1
AGCGT	3																																																																																				3
AGCTA	1																																																																																				1
AGCTC	2																																																																																				2
AGCTG	1																																																																																				1
AGCTT	5																																																																																				5
AGGAC	2		1																																																																																		3
AGGAT	3	2																																																																																			5
AGGCA	1																																																																																				1
AGGCC	3																																																																																				3
AGGCG	1																																																																																				1
AGGCT	2																																																																																				2
AGGGT	2																																																																																				2
AGGTA	8																																																																																				8
AGGTC	1																																																																																				1
AGGTT	13	3		1			1				1																																																																										19
AGTAA	6				1																																																																																7
AGTAC	3		1																																																																																		4
AGTAG	2																																																																																				2
AGTAT	9	2																																																																																			11
AGTCA	4																																																																																				4
AGTCG	1																																																																																				1
AGTCT	4	2																																																																																			6
AGTGA	3																																																																																				3
AGTGC	2																																																																																				2
AGTGG	1																																																																																				1
AGTGT	4																																																																																				4
AGTTC	1																																																																																				1
AGTTG	3																																																																																				3
AGTTT	12	1																																																																																			13
ATAAA	74	2			1								1																																																																								78
ATAAC	4																																																																																				4
ATAAG	4		1																																																																																		5
ATAAT	24	1																																																																																			25
ATACA	18	4																																																																																			22
ATACC	4																																																																																				4
ATACG	6	2																																																																																			8
ATACT	7																																																																																				7
ATAGA	9	1																																																																																			10
ATAGC	3																																																																																				3
ATAGG	4	1																																																																																			5
ATAGT	6		1																																																																																		7
ATATA	26																																																																																				26
ATATC	4																																																																																				4
ATATG	5																																																																																				5
ATATT	29																																																																																				29
ATCAA	21	1	1																																																																																		23
ATCAC	8																																																																																				8
ATCAG	4																																																																																				4
ATCAT	3																																																																																				3
ATCCA	1																																																																																				1
ATCCC	1																																																																																				1
ATCCG	2																																																																																				2
ATCCT	2	1																																																																																			3
ATCGA	6	1																																																																																			7
ATCGC	2																																																																																				2
ATCGG	1																																																																																				1
ATCGT	4																																																																																				4
ATCTA	6																																																																																				6
ATCTC	4																																																																																				4
ATCTG	2																																																																																				2
ATCTT	7																																																																																				7
ATGAA	14																																																																																				14
ATGAC	5	1																																																																																			6
ATGAG	5																																																																																				5
ATGAT	3																																																																																				3
ATGCA	1																																																																																				1
ATGCC	1																																																																																				1
ATGCG	2																																																																																				2
ATGCT	6																																																																																				6
ATGGA	4	2																																																																																			6
ATGGC	2	1																																																																																			3
ATGGG	2																																																																																				2
ATGGT	4	1																																																																																			5
ATGTA	12	1																																																																																			13
ATGTC	12	1																																																																																			13
ATGTG	8	1																																																																																			9
ATGTT	7	2																																																																																			9
ATTAA	32	4																																																																																			36
ATTAC	9	1	1																																																																																		11
ATTAG	7	1																																																																																			8
ATTAT	19	1																																																																																			20
ATTCA	43	10	1	2			1																																																																														57
ATTCC	4	4		1								1																																																																									10
ATTCG	4																																																																																				4
ATTCT	5				1																																																																																6
ATTGA	85	24	1																																																																																		110
ATTGC	1																																																																																				1
ATTGG	3																																																																																				3
ATTGT	15	1																																																																																			16
ATTTA	34	1																																																																																			35
ATTTC	26	5		1																																																																																	32
ATTTG	29		2																																																																																		31
ATTTT	87	6	4																																																																																		97
CAAAA	8																																																																																				8
CAAAC	3																																																																																				3
CAAAG	4																																																																																				4
CAAAT	6	3																																																																																			9
CAACA	5																																																																																				5
CAACC	2																																																																																				2
CAAGA	2																																																																																				2
CAAGC	2	1																																																																																			3
CAAGG	1																																																																																				1
CAATA	8		1																																																																																		9
CAATC	1																																																																																				1
CAATG	5	1																																																																																			6
CAATT	20	3																																																																																			23
CACAA	7																																																																																				7
CACAC	2																																																																																				2
CACAG	2																																																																																				2
CACAT	5																																																																																				5
CACCA	4																																																																																				4
CACCT	1																																																																																				1
CACGA	2																																																																																				2
CACGT	3																																																																																				3
CACTA	5		1																																																																																		6
CACTC	2																																																																																				2
CACTG	2																																																																																				2
CACTT	3																																																																																				3
CAGAA	3	1																																																																																			4
CAGAT	2																																																																																				2
CAGCA	1																																																																																				1
CAGCG	1																																																																																				1
CAGCT	2																																																																																				2
CAGGA	1																																																																																				1
CAGGT	1																																																																																				1
CAGTA	1	1																																																																																			2
CAGTC	2																																																																																				2
CAGTG	4																																																																																				4
CAGTT	4																																																																																				4
CATAA	6																																																																																				6
CATAC	1																																																																																				1
CATAG	3																																																																																				3
CATAT	1																																																																																				1
CATCA	3																																																																																				3
CATCC		1																																																																																			1
CATCG	2																																																																																				2
CATCT	1																																																																																				1
CATGA	5																																																																																				5
CATGC	1	1																																																																																			2
CATGT	4																																																																																				4
CATTA	13																																																																																				13
CATTC	5	2	1			1																																																																															9
CATTG	4	1																																																																																			5
CATTT	6	1																																																																																			7
CCAAG	1																																																																																				1
CCACA	3	1																																																																																			4
CCACG	1																																																																																				1
CCAGG	1																																																																																				1
CCAGT	2																																																																																				2
CCATA	2	1																																																																																			3
CCATC	1																																																																																				1
CCATT	2	1																																																																																			3
CCCAG	1																																																																																				1
CCCAT	2																																																																																				2
CCCCG	1																																																																																				1
CCCCT	1																																																																																				1
CCCTA	1																																																																																				1
CCCTC	1																																																																																				1
CCCTG	1	1																																																																																			2
CCCTT	1																																																																																				1
CCGAT	1																																																																																				1
CCGCC	1																																																																																				1
CCGTA	1																																																																																				1
CCGTG	1																																																																																				1
CCGTT	1																																																																																				1
CCTAA	9	3		2				1	1		2																																																																										18
CCTAC	3	1																																																																																			4
CCTAG	3																																																																																				3
CCTAT	1																																																																																				1
CCTCC	1				1																																																																																2
CCTCT	1																																																																																				1
CCTGA	1																																																																																				1
CCTTA	5																																																																																				5
CCTTG	1																																																																																				1
CCTTT	2																																																																																				2
CGAAA	2																																																																																				2
CGAAG	2																																																																																				2
CGAAT	2																																																																																				2
CGACA	1																																																																																				1
CGACG	6		1																																																																																		7
CGACT	1																																																																																				1
CGAGG	1																																																																																				1
CGATA	1																																																																																				1
CGATC	1																																																																																				1
CGATG	2																																																																																				2
CGATT	1	1																																																																																			2
CGCAC		1																																																																																			1
CGCAG	1																																																																																				1
CGCAT	1																																																																																				1
CGCCA	1																																																																																				1
CGCCG	6																																																																																				6
CGCCT	1																																																																																				1
CGCGA	1																																																																																				1
CGCGC	1																																																																																				1
CGCGG	1																																																																																				1
CGCTA	2																																																																																				2
CGCTC	1																																																																																				1
CGCTG	1																																																																																				1
CGCTT	1		1																																																																																		2
CGGAC	1																																																																																				1
CGGAG	1																																																																																				1
CGGCG	1																																																																																				1
CGGCT	2																																																																																				2
CGGGA	1																																																																																				1
CGGTA	1																																																																																				1
CGTAA	4																																																																																				4
CGTAC	1	1																																																																																			2
CGTAG	1																																																																																				1
CGTCA	6	1																																																																																			7
CGTCC	1																																																																																				1
CGTCG	3																																																																																				3
CGTCT	2																																																																																				2
CGTGA	4	2																																																																																			6
CGTTA	2																																																																																				2
CGTTG	1																																																																																				1
CTAAA	9	1																																																																																			10
CTAAC	32	10	2	1			1	2		2		2																																																																									52
CTAAG		1																																																																																			1
CTAAT	1																																																																																				1
CTACA	3					1																																																																															4
CTACC	1																																																																																				1
CTACG	1																																																																																				1
CTACT	6																																																																																				6
CTAGA	5																																																																																				5
CTAGC	1																																																																																				1
CTAGG	2																																																																																				2
CTAGT	2																																																																																				2
CTATA	9		1			1																																																																															11
CTATC	8	1					1																																																																														10
CTATG	3																																																																																				3
CTATT	3		1																																																																																		4
CTCAA	2																																																																																				2
CTCAC	2																																																																																				2
CTCAG	3																																																																																				3
CTCAT	2																																																																																				2
CTCCA	1	1																																																																																			2
CTCCT	1																																																																																				1
CTCGA	1																																																																																				1
CTCGT	1																																																																																				1
CTCTA	5																																																																																				5
CTCTC	5								1																																																																												6
CTGAA	4																																																																																				4
CTGAC	1																																																																																				1
CTGAT	3																																																																																				3
CTGCA	3																																																																																				3
CTGCC	1																																																																																				1
CTGCT	1																																																																																				1
CTGGA	2																																																																																				2
CTGGT	2																																																																																				2
CTGTA	3	1																																																																																			4
CTGTC	1																																																																																				1
CTGTG	4																																																																																				4
CTGTT	6																																																																																				6
CTTAA	4																																																																																				4
CTTAC	8	3																																																																																			11
CTTAG	3																																																																																				3
CTTAT	3	1																																																																																			4
CTTCA	3																																																																																				3
CTTCG	1																																																																																				1
CTTCT	4																																																																																				4
CTTGA	3																																																																																				3
CTTGG	1																																																																																				1
CTTGT	1																																																																																				1
CTTTA	2																																																																																				2
CTTTC	2																																																																																				2
CTTTG	3	1																																																																																			4
CTTTT	10																																																																																				10
GAAAA	10	1																																																																																			11
GAAAC	5																																																																																				5
GAAAG	1																																																																																				1
GAAAT	14	2																																																																																			16
GAAGA	3																																																																																				3
GAAGT	1																																																																																				1
GAATA	5	3		1																																																																																	9
GAATC	8																																																																																				8
GAATG	3	3																																																																																			6
GAATT	14	3	1																																																																																		18
GACAA	2																																																																																				2
GACAC		1																																																																																			1
GACAG	2																																																																																				2
GACAT	6																																																																																				6
GACCT	2																																																																																				2
GACGA	1																																																																																				1
GACGC	1																																																																																				1
GACGT		3																																																																																			3
GACTA	1	1																																																																																			2
GACTC	1																																																																																				1
GACTG	1																																																																																				1
GACTT	1																																																																																				1
GAGAA	6																																																																																				6
GAGAG	5	1																																																																																			6
GAGCT	1																																																																																				1
GAGGA	5																																																																																				5
GAGGG	2																																																																																				2
GAGGT	2																																																																																				2
GAGTG	1																																																																																				1
GAGTT	1																																																																																				1
GATAA	2	1	1																																																																																		4
GATAC	3	1																																																																																			4
GATAG	1	1																																																																																			2
GATAT	2																																																																																				2
GATCA	2																																																																																				2
GATCT	1																																																																																				1
GATGA	3																																																																																				3
GATGG	1	1																																																																																			2
GATTA	4																																																																																				4
GATTC	2																																																																																				2
GATTG	3																																																																																				3
GATTT	18	3																																																																																			21
GCAAC	1																																																																																				1
GCAAT	1																																																																																				1
GCACA	1																																																																																				1
GCAGA	1																																																																																				1
GCAGT	1																																																																																				1
GCATA	2																																																																																				2
GCATC	1																																																																																				1
GCATT	2																																																																																				2
GCCAA	1																																																																																				1
GCCAT	1																																																																																				1
GCCCT			1																																																																																		1
GCCGC	2																																																																																				2
GCCGT	1																																																																																				1
GCCTA	2																																																																																				2
GCCTC	1																																																																																				1
GCGAC	1																																																																																				1
GCGAT	1																																																																																				1
GCGCA	1																																																																																				1
GCGCC	1																																																																																				1
GCGCG	2																																																																																				2
GCGCT	1																																																																																				1
GCGGC	5	1																																																																																			6
GCGGT	1																																																																																				1
GCGTA	1																																																																																				1
GCGTC	2																																																																																				2
GCGTG	1																																																																																				1
GCTAA	4																																																																																				4
GCTAC	2																																																																																				2
GCTAT	1																																																																																				1
GCTCG	1																																																																																				1
GCTCT	1																																																																																				1
GCTGA	1																																																																																				1
GCTGC	1																																																																																				1
GCTGG	1																																																																																				1
GCTGT	1																																																																																				1
GCTTG	2																																																																																				2
GGAAA	2																																																																																				2
GGAAT	2	1				1		1																																																																													5
GGACA	1																																																																																				1
GGACC	1																																																																																				1
GGAGA	1								1																																																																												2
GGAGC	1																																																																																				1
GGAGG	1																																																																																				1
GGAGT	2																																																																																				2
GGATA	1																																																																																				1
GGATC	1																																																																																				1
GGATG	2																																																																																				2
GGCCA	1																																																																																				1
GGCTA	2																																																																																				2
GGCTT	1																																																																																				1
GGGAT	2																																																																																				2
GGGGA	5																																																																																				5
GGGGT	1																																																																																				1
GGGTA	2																																																																																				2
GGGTT	2																																																																																				2
GGTAA	5	1																																																																																			6
GGTAC	2																																																																																				2
GGTAG	2	1	1																																																																																		4
GGTAT	2																																																																																				2
GGTCA	2																																																																																				2
GGTCT	1																																																																																				1
GGTGA	4																																																																																				4
GGTGC	2	1																																																																																			3
GGTGG	1																																																																																				1
GGTGT	2																																																																																				2
GGTTA	17	1	1		6	4	3	6		1	2	3	4																																																																								48
GGTTT	1																																																																																				1
GTAAA	2			1																																																																																	3
GTAAC	3	1																																																																																			4
GTAAG	2	2																																																																																			4
GTAAT	7																																																																																				7
GTACA	5																																																																																				5
GTACC	1																																																																																				1
GTACG		1																																																																																			1
GTACT	1	1																																																																																			2
GTAGA	1																																																																																				1
GTAGC	1																																																																																				1
GTAGG	1																																																																																				1
GTAGT	2																																																																																				2
GTATA	8	1																																																																																			9
GTATC	3																																																																																				3
GTATG	4																																																																																				4
GTATT	8	2																																																																																			10
GTCAA	6	1																																																																																			7
GTCAC	6	1																																																																																			7
GTCAG	3	1																																																																																			4
GTCAT	7																																																																																				7
GTCCG	1																																																																																				1
GTCCT	1																																																																																				1
GTCGA	3																																																																																				3
GTCGT	3																																																																																				3
GTCTA	5																																																																																				5
GTCTC	2																																																																																				2
GTGAA	2	2																																																																																			4
GTGAC	4																																																																																				4
GTGAG	3																																																																																				3
GTGAT	5																																																																																				5
GTGCA	1																																																																																				1
GTGCT	1																																																																																				1
GTGGA	1																																																																																				1
GTGGC	2																																																																																				2
GTGGG	1																																																																																				1
GTGGT	1																																																																																				1
GTGTA	7	2																																																																																			9
GTGTC	1	3																																																																																			4
GTGTG	2																																																																																				2
GTGTT	3																																																																																				3
GTTAA	3	1																																																																																			4
GTTAC	3	1																																																																																			4
GTTAG	35	6	3		1		1	1		2	1	3	1																																																																								54
GTTAT	8	1																																																																																			9
GTTCA	2																																																																																				2
GTTCG	1																																																																																				1
GTTGA	1																																																																																				1
GTTGC	1																																																																																				1
GTTGG	2																																																																																				2
GTTGT	2	1																																																																																			3
GTTTA	8		1																																																																																		9
GTTTG	4																																																																																				4
GTTTT	6	2																																																																																			8
TAAAA	120	2				1																																																																															123
TAAAC	6	1																																																																																			7
TAAAG	10																																																																																				10
TAAAT	40	1																																																																																			41
TAACA	11																																																																																				11
TAACC	29	5	1		1								2																																																																								38
TAACG	6																																																																																				6
TAACT	3																																																																																				3
TAAGA	11																																																																																				11
TAAGC	1																																																																																				1
TAAGG	12	1	1																																																																																		14
TAAGT	2																																																																																				2
TAATA	19																																																																																				19
TAATC	5																																																																																				5
TAATG	6	1																																																																																			7
TAATT	24																																																																																				24
TACAA	24	4																																																																																			28
TACAC	7	2																																																																																			9
TACAG	8																																																																																				8
TACAT	15	2		1																																																																																	18
TACCA	5					1																																																																															6
TACCC	1																																																																																				1
TACCG				1																																																																																	1
TACCT	17																																																																																				17
TACGA	8																																																																																				8
TACGC	2																																																																																				2
TACGG	3																																																																																				3
TACGT	6																																																																																				6
TACTA	8	2				1																																																																															11
TACTC	1	1																																																																																			2
TACTG	6																																																																																				6
TACTT	9			1																																																																																	10
TAGAA	9		1	1																																																																																	11
TAGAC	2																																																																																				2
TAGAG	3	1																																																																																			4
TAGAT	7				1																																																																																8
TAGCA	4																																																																																				4
TAGCG	1																																																																																				1
TAGCT	6																																																																																				6
TAGGA	2																																																																																				2
TAGGC	1																																																																																				1
TAGGT	27	6	1	1	1	1	1	2				1	1																																																																								42
TAGTA	5		1																																																																																		6
TAGTC	4																																																																																				4
TAGTG	5	1																																																																																			6
TAGTT	4																																																																																				4
TATAA	16	2																																																																																			18
TATAC	5	3																																																																																			8
TATAG	8	2																																																																																			10
TATAT	28																																																																																				28
TATCA	8																																																																																				8
TATCC	1	1																																																																																			2
TATCG	6																																																																																				6
TATCT	3																																																																																				3
TATGA	4	1																																																																																			5
TATGC	5																																																																																				5
TATGG	2		1																																																																																		3
TATGT	6																																																																																				6
TATTA	20																																																																																				20
TATTC	9						1																																																																														10
TATTG	15	2	1			1						1																																																																									20
TATTT	98	2				1																																																																															101
TCAAA	33	2																																																																																			35
TCAAC	2																																																																																				2
TCAAG	1																																																																																				1
TCAAT	16	2				1																																																																															19
TCACA	7																																																																																				7
TCACC	3																																																																																				3
TCACG	2																																																																																				2
TCACT	3																																																																																				3
TCAGA	3	1																																																																																			4
TCAGC	2																																																																																				2
TCAGG	1																																																																																				1
TCAGT	4																																																																																				4
TCATA	3																																																																																				3
TCATG	4																																																																																				4
TCATT	4																																																																																				4
TCCAA	2																																																																																				2
TCCAG	3	1																																																																																			4
TCCAT	6																																																																																				6
TCCCA	2																																																																																				2
TCCCG	1																																																																																				1
TCCGA	1																																																																																				1
TCCGC	1																																																																																				1
TCCGT	1																																																																																				1
TCCTA	4																																																																																				4
TCCTC	2		1		1																																																																																4
TCCTT	3																																																																																				3
TCGAA	3																																																																																				3
TCGAG	2																																																																																				2
TCGAT	3	1																																																																																			4
TCGCA	2																																																																																				2
TCGCC	1																																																																																				1
TCGCG	1																																																																																				1
TCGGA	1																																																																																				1
TCGGT	1																																																																																				1
TCGTA	3	1																																																																																			4
TCGTC	1																																																																																				1
TCGTG	7																																																																																				7
TCGTT	1																																																																																				1
TCTAA	5	1																																																																																			6
TCTAC	1																																																																																				1
TCTAG	6	2																																																																																			8
TCTAT	4	1																																																																																			5
TCTCA	4																																																																																				4
TCTCC	2						1																																																																														3
TCTCG	3																																																																																				3
TCTCT	5																																																																																				5
TCTGA	2																																																																																				2
TCTGG	1																																																																																				1
TCTGT	2																																																																																				2
TCTTA	5	1																																																																																			6
TCTTC	10																																																																																				10
TCTTG	3																																																																																				3
TCTTT	9	1																																																																																			10
TGAAA	19	4																																																																																			23
TGAAC	2																																																																																				2
TGAAG	1																																																																																				1
TGAAT	30	2	1																																																																																		33
TGACA	9	2																																																																																			11
TGACG	3		1																																																																																		4
TGACT	3																																																																																				3
TGAGA	1																																																																																				1
TGAGC	3																																																																																				3
TGAGG	2	2																																																																																			4
TGAGT	1																																																																																				1
TGATC	1																																																																																				1
TGATG	10																																																																																				10
TGATT	10			1																																																																																	11
TGCAA	1																																																																																				1
TGCAC	4																																																																																				4
TGCAG	1																																																																																				1
TGCAT	5	1																																																																																			6
TGCCA	2																																																																																				2
TGCCC	1																																																																																				1
TGCGA	2																																																																																				2
TGCGC	2																																																																																				2
TGCGG	1																																																																																				1
TGCGT	1																																																																																				1
TGCTA	2																																																																																				2
TGCTG	2																																																																																				2
TGCTT	3																																																																																				3
TGGAA	2		3			1																																																																															6
TGGAT	6																																																																																				6
TGGCA	2																																																																																				2
TGGCG	2	1																																																																																			3
TGGTA	4	1																																																																																			5
TGGTC	1																																																																																				1
TGGTG	2																																																																																				2
TGTAA	15																																																																																				15
TGTAC	4																																																																																				4
TGTAG	5		1																																																																																		6
TGTAT	14		1	1	1																																																																																17
TGTCA	15	1																																																																																			16
TGTCC	1	1																																																																																			2
TGTCG	3																																																																																				3
TGTCT	4																																																																																				4
TGTGA	5																																																																																				5
TGTGG	1																																																																																				1
TGTGT	7	2	1																																																																																		10
TGTTA	7			1																																																																																	8
TGTTC	2																																																																																				2
TGTTG	1																																																																																				1
TGTTT	9																																																																																				9
TTAAA	31	2	1																																																																																		34
TTAAC	3	1																																																																																			4
TTAAG	4	1																																																																																			5
TTAAT	32																																																																																				32
TTACA	13	4			1																																																																																18
TTACC	10																																																																																				10
TTACG	8		1																																																																																		9
TTACT	8	1																																																																																			9
TTAGA	3																																																																																				3
TTAGC	3																																																																																				3
TTAGG	13	4	3	1	1	1	1	1		3	1	3	5																																																																								37
TTAGT	8	1																																																																																			9
TTATA	11	1																																																																																			12
TTATC	7	1																																																																																			8
TTATG	8	1																																																																																			9
TTATT	96	5																																																																																			101
TTCAA	50	13																																																																																			63
TTCAC	3																																																																																				3
TTCAG	7	1																																																																																			8
TTCAT	22	2																																																																																			24
TTCCA	8	5																																																																																			13
TTCCC	2	1																																																																																			3
TTCCG	1																																																																																				1
TTCCT	3	1																																																																																			4
TTCGA	3																																																																																				3
TTCGC	4																																																																																				4
TTCGT	2																																																																																				2
TTCTA	13	1																																																																																			14
TTCTC	5																																																																																				5
TTCTG	4																																																																																				4
TTCTT	10																																																																																				10
TTGAA	37	4	1																																																																																		42
TTGAC	1	2																																																																																			3
TTGAG	4																																																																																				4
TTGAT	19																																																																																				19
TTGCA	5																																																																																				5
TTGCT	1																																																																																				1
TTGGA	7																																																																																				7
TTGGT	1																																																																																				1
TTGTA	37	5	1		1																																																																																44
TTGTC	4																																																																																				4
TTGTG	7																																																																																				7
TTGTT	12																																																																																				12
TTTAA	34	3																																																																																			37
TTTAC	9	1																																																																																			10
TTTAG	13	1	1																																																																																		15
TTTAT	118	5	1																																																																																		124
TTTCA	29	1		1																																																																																	31
TTTCC	2																																																																																				2
TTTCG	4	1																																																																																			5
TTTCT	12																																																																																				12
TTTGA	30	1																																																																																			31
TTTGC	5																																																																																				5
TTTGG	6																																																																																				6
TTTGT	17																																																																																				17
TTTTA	186	11	3		1			1																																																																													202
TTTTC	16	4																																																																																			20
TTTTG	26																																																																																				26
AAAAAT	5																																																																																				5
AAAATA	11																																																																																				11
AAAATC	10		1																																																																																		11
AAAATT	1																																																																																				1
AAACAC	1																																																																																				1
AAACAT		1																																																																																			1
AAACCG	2																																																																																				2
AAACCT	1																																																																																				1
AAACTA	1																																																																																				1
AAACTT	2																																																																																				2
AAATAA	6	1																																																																																			7
AAATAC	1																																																																																				1
AAATAG	1																																																																																				1
AAATAT	1																																																																																				1
AAATCA		1																																																																																			1
AAATGA	1																																																																																				1
AAATGC	1																																																																																				1
AAATGT	2																																																																																				2
AAATTA	4																																																																																				4
AAATTC	1																																																																																				1
AAATTG				1																																																																																	1
AAATTT	2																																																																																				2
AACAGT		1																																																																																			1
AACCGA	6																																																																																				6
AACTTA	1																																																																																				1
AAGAAA	2																																																																																				2
AAGAGA	1																																																																																				1
AAGATG	1																																																																																				1
AAGCTA	1																																																																																				1
AAGGAC	1																																																																																				1
AAGGGT	1																																																																																				1
AAGGTT	1																																																																																				1
AAGTAA	1																																																																																				1
AAGTTG	1																																																																																				1
AATAAA	4	1																																																																																			5
AATACA	5																																																																																				5
AATACG	1																																																																																				1
AATAGA	3																																																																																				3
AATAGC	1																																																																																				1
AATAGG	1																																																																																				1
AATATG	1																																																																																				1
AATATT	1																																																																																				1
AATCAA	1		1																																																																																		2
AATCAG	1																																																																																				1
AATCTA	1																																																																																				1
AATCTC	1																																																																																				1
AATCTT	2																																																																																				2
AATGCA	1																																																																																				1
AATGGT	1																																																																																				1
AATTAA	3																																																																																				3
AATTAC	1	1																																																																																			2
AATTCA	2	1																																																																																			3
AATTCG	1																																																																																				1
AATTCT	1																																																																																				1
AATTTA	4																																																																																				4
AATTTC			1																																																																																		1
AATTTG	3																																																																																				3
AATTTT	3																																																																																				3
ACAAAT	3																																																																																				3
ACAACT	1																																																																																				1
ACACAA	1																																																																																				1
ACACAT		2	1																																																																																		3
ACCAAG		1																																																																																			1
ACCAGA	1	1																																																																																			2
ACCCCT	1																																																																																				1
ACCCGT	1																																																																																				1
ACCGAA	24																																																																																				24
ACCTAC	1																																																																																				1
ACCTAT	1																																																																																				1
ACCTTT	1																																																																																				1
ACGCAC	1																																																																																				1
ACGGCG	1																																																																																				1
ACGGGT	1																																																																																				1
ACGTCA	1																																																																																				1
ACTAAC	1																																																																																				1
ACTAAG	1																																																																																				1
ACTACA	1																																																																																				1
ACTCAC	1																																																																																				1
ACTGAG	1																																																																																				1
ACTGTA	1																																																																																				1
ACTGTG	1																																																																																				1
ACTTCG	1																																																																																				1
ACTTTA	1																																																																																				1
AGAAAT	3																																																																																				3
AGAAGG	1																																																																																				1
AGAAGT	1																																																																																				1
AGAATA	1		1																																																																																		2
AGAATC		1			1																																																																																2
AGACAA	1																																																																																				1
AGACTC	1																																																																																				1
AGAGAC	1	1																																																																																			2
AGAGGT	2																																																																																				2
AGATAT	1																																																																																				1
AGATTT	1																																																																																				1
AGCACA	1																																																																																				1
AGCAGT		1																																																																																			1
AGCGGC	1																																																																																				1
AGCGGG	1																																																																																				1
AGCTAG	1																																																																																				1
AGGAGA	1																																																																																				1
AGGATA	1																																																																																				1
AGGATG	1																																																																																				1
AGGATT	2																																																																																				2
AGGCAA	1																																																																																				1
AGGTAT	2																																																																																				2
AGGTGC	1																																																																																				1
AGTACA	2																																																																																				2
AGTCAA	1																																																																																				1
AGTCAT	1																																																																																				1
AGTGAT	1																																																																																				1
AGTGTC			1																																																																																		1
AGTTAG		1																																																																																			1
AGTTCA	1																																																																																				1
AGTTTG	1																																																																																				1
AGTTTT	1																																																																																				1
ATAAAA	2																																																																																				2
ATAAAT	4																																																																																				4
ATAACG	1																																																																																				1
ATAAGT	1																																																																																				1
ATAATC	1																																																																																				1
ATAATT	1																																																																																				1
ATACAA	1																																																																																				1
ATACCA	1																																																																																				1
ATACGG	1																																																																																				1
ATAGAA	1																																																																																				1
ATAGGT	2																																																																																				2
ATAGTA	1																																																																																				1
ATATAC	1																																																																																				1
ATATCA	1																																																																																				1
ATATTA	1																																																																																				1
ATATTC	2																																																																																				2
ATATTT	1																																																																																				1
ATCAAT	2																																																																																				2
ATCACC	1																																																																																				1
ATCACT	3																																																																																				3
ATCAGA	1																																																																																				1
ATCATT	2																																																																																				2
ATCCAA	1																																																																																				1
ATCCTA	1																																																																																				1
ATCCTT	2																																																																																				2
ATCGTA	1																																																																																				1
ATCGTT	2																																																																																				2
ATCTGA	1																																																																																				1
ATCTTT		1																																																																																			1
ATGAAA	1																																																																																				1
ATGAAT		1																																																																																			1
ATGATA		2																																																																																			2
ATGATT	1																																																																																				1
ATGGTT	1																																																																																				1
ATGTCA	1																																																																																				1
ATGTGA	1																																																																																				1
ATTAAA	2																																																																																				2
ATTAAC	1																																																																																				1
ATTAAT	1																																																																																				1
ATTACA	1																																																																																				1
ATTACC	1																																																																																				1
ATTAGG	1																																																																																				1
ATTAGT	2																																																																																				2
ATTATA	1																																																																																				1
ATTATC	2																																																																																				2
ATTCAA	2																																																																																				2
ATTCAG	1																																																																																				1
ATTCAT	1																																																																																				1
ATTCTA	1																																																																																				1
ATTCTT	2																																																																																				2
ATTGAA	1																																																																																				1
ATTGAC	1																																																																																				1
ATTGAG	1																																																																																				1
ATTGCA	1																																																																																				1
ATTGGT		1																																																																																			1
ATTTAT	1																																																																																				1
ATTTCA	2	1	1																																																																																		4
ATTTGT	9	1																																																																																			10
ATTTTA	2																																																																																				2
ATTTTC	5																																																																																				5
ATTTTT	7																																																																																				7
CAAAAT	2																																																																																				2
CAACAG	1																																																																																				1
CAAGTA	1																																																																																				1
CACACG	2																																																																																				2
CACAGT	1																																																																																				1
CACATG	1																																																																																				1
CACCTT	1																																																																																				1
CACGCG	1																																																																																				1
CACGTC	1																																																																																				1
CAGAAC	1																																																																																				1
CAGAAT	1																																																																																				1
CAGTTT	1																																																																																				1
CATAAT	1																																																																																				1
CATCAC	1																																																																																				1
CATCCG	1																																																																																				1
CATCTC	1																																																																																				1
CATTAT		1																																																																																			1
CATTCG	1																																																																																				1
CATTGA	1																																																																																				1
CATTGT	1																																																																																				1
CATTTT	1																																																																																				1
CCACAC	1																																																																																				1
CCACAG	1																																																																																				1
CCACAT	1																																																																																				1
CCACGG	1																																																																																				1
CCACTT	1																																																																																				1
CCAGAT	3																																																																																				3
CCATCG	1																																																																																				1
CCATCT	1																																																																																				1
CCATTG	1																																																																																				1
CCCACT		1																																																																																			1
CCCAGC			1																																																																																		1
CCCCCA	1																																																																																				1
CCCGCT	1																																																																																				1
CCCTCA		1																																																																																			1
CCCTCT	1																																																																																				1
CCGAAA	13																																																																																				13
CCGCAA			1																																																																																		1
CCGCCA	1																																																																																				1
CCGGTC	1																																																																																				1
CCTAAG	1																																																																																				1
CCTAAT	1																																																																																				1
CCTAGT	1																																																																																				1
CCTGCA		1																																																																																			1
CCTTCA	1																																																																																				1
CCTTGG	1																																																																																				1
CGAAAC	1																																																																																				1
CGACCG	1																																																																																				1
CGATAT	1																																																																																				1
CGCACC	1																																																																																				1
CGCATC	1																																																																																				1
CGCATG	1																																																																																				1
CGCGAC	1																																																																																				1
CGCGCA	1																																																																																				1
CGGATA	3																																																																																				3
CGGCAT	1																																																																																				1
CGGCGC	1																																																																																				1
CGGGAC	2																																																																																				2
CGGGCG	1																																																																																				1
CGGTAC	1																																																																																				1
CGGTCG	1																																																																																				1
CGGTGA	1																																																																																				1
CGTCGC	1																																																																																				1
CGTCGG	1																																																																																				1
CGTCTA	1																																																																																				1
CGTGAA	1																																																																																				1
CGTGTG		1																																																																																			1
CGTTCC	1																																																																																				1
CGTTCG	2																																																																																				2
CTAAAA	1																																																																																				1
CTAAAC	1																																																																																				1
CTAATA	1																																																																																				1
CTACGA	1																																																																																				1
CTAGAA	2																																																																																				2
CTATAC	1																																																																																				1
CTATAG	1																																																																																				1
CTCCTT	1																																																																																				1
CTCGCA	1																																																																																				1
CTCTAT	1																																																																																				1
CTGATG	1																																																																																				1
CTGCGC	2																																																																																				2
CTGGCT	1																																																																																				1
CTGTCA	3																																																																																				3
CTGTTT	1																																																																																				1
CTTCAC	1																																																																																				1
CTTCAG	1																																																																																				1
CTTCCG	1																																																																																				1
CTTGTC	1																																																																																				1
CTTTGA	1																																																																																				1
CTTTTC	1																																																																																				1
CTTTTG		1																																																																																			1
CTTTTT	1																																																																																				1
GAAAAT	2																																																																																				2
GAAACC	1																																																																																				1
GAAATC	1																																																																																				1
GAAATT			1																																																																																		1
GAACCA	1																																																																																				1
GAATAC	1																																																																																				1
GACATG	1																																																																																				1
GACATT	1																																																																																				1
GACCGC	1																																																																																				1
GACGAT	1																																																																																				1
GACGCA	2																																																																																				2
GACTCA	1																																																																																				1
GAGAAG	1																																																																																				1
GAGCCC	1																																																																																				1
GAGCGG	1																																																																																				1
GAGGGT		1																																																																																			1
GAGTTT	1																																																																																				1
GATAAT	1																																																																																				1
GATACA	1																																																																																				1
GATATC	1																																																																																				1
GATATT	1																																																																																				1
GATCTA	1																																																																																				1
GATGAC		1																																																																																			1
GATTCT	2				1																																																																																3
GATTTT	2																																																																																				2
GCACAC	1	1																																																																																			2
GCACAT	1																																																																																				1
GCATCG	1																																																																																				1
GCCAAG	1																																																																																				1
GCCCAC	1																																																																																				1
GCCGAC		1																																																																																			1
GCCGGA						1																																																																															1
GCGAGT	1																																																																																				1
GCGCAC	1																																																																																				1
GCGCAG	1																																																																																				1
GCGGAA	2																																																																																				2
GCGGGA	1																																																																																				1
GCGGGG	1																																																																																				1
GCGGGT		2																																																																																			2
GCGGTG	1																																																																																				1
GCGTCC	1																																																																																				1
GCGTGC	1																																																																																				1
GCGTGT	1																																																																																				1
GCTAAA	1																																																																																				1
GCTAGG	1																																																																																				1
GCTGGA	1																																																																																				1
GGACAA	1																																																																																				1
GGAGCG		1																																																																																			1
GGAGGG	2	1																																																																																			3
GGATAG	1																																																																																				1
GGCCAT	1																																																																																				1
GGCGAC	1																																																																																				1
GGCGAT	1																																																																																				1
GGCGCC	1																																																																																				1
GGCGCT	1																																																																																				1
GGCGTG	1																																																																																				1
GGCTAC	1																																																																																				1
GGGAAC		1																																																																																			1
GGGTGC	2																																																																																				2
GGTACC	1																																																																																				1
GGTAGC	1																																																																																				1
GGTCAC	1																																																																																				1
GGTGGA	1																																																																																				1
GGTGGG		1																																																																																			1
GGTTGC			2																																																																																		2
GGTTTC	1																																																																																				1
GGTTTG	1																																																																																				1
GTAAAT	1																																																																																				1
GTACCA	1																																																																																				1
GTACGT	1																																																																																				1
GTAGTG	1																																																																																				1
GTATGA	2																																																																																				2
GTATTT	1																																																																																				1
GTCAAC	1																																																																																				1
GTCACA	1																																																																																				1
GTCACG	1																																																																																				1
GTCAGT	1																																																																																				1
GTCATG	2																																																																																				2
GTCCTG	1																																																																																				1
GTCGCA	1																																																																																				1
GTCTAC	1																																																																																				1
GTCTTG	2	1	1																																																																																		4
GTGACA	2																																																																																				2
GTGAGA		1																																																																																			1
GTGCAA	1																																																																																				1
GTGCCG	1																																																																																				1
GTGCGC	1																																																																																				1
GTGCGG		1																																																																																			1
GTGCGT	1					1																																																																															2
GTGGTC	1																																																																																				1
GTGTAT		1																																																																																			1
GTGTGC	5		2																																																																																		7
GTTAGA		1																																																																																			1
GTTATT	1																																																																																				1
GTTCCG	1																																																																																				1
GTTCTA	1																																																																																				1
GTTGAG		1																																																																																			1
GTTGAT		1																																																																																			1
GTTGCG	2																																																																																				2
GTTTCA	1																																																																																				1
GTTTCG	8	2																																																																																			10
GTTTGC	1																																																																																				1
TAAAAA	5																																																																																				5
TAAAAT	3																																																																																				3
TAAACC	2																																																																																				2
TAAAGA	1																																																																																				1
TAAATA	2																																																																																				2
TAAATT	1																																																																																				1
TAACCT	1																																																																																				1
TAACGC	1																																																																																				1
TAACGG	1																																																																																				1
TAACGT	1																																																																																				1
TAAGAA	3																																																																																				3
TAAGCA	1																																																																																				1
TAAGGA	1																																																																																				1
TAAGGG	1																																																																																				1
TAAGTA	1																																																																																				1
TAAGTT	2																																																																																				2
TAATAG	1																																																																																				1
TAATAT	1																																																																																				1
TAATGC	1																																																																																				1
TAATGT	1																																																																																				1
TAATTA	1																																																																																				1
TAATTG	1																																																																																				1
TAATTT	1																																																																																				1
TACAAA	5																																																																																				5
TACATA	4																																																																																				4
TACCTA	3																																																																																				3
TACCTG	2																																																																																				2
TACTAA	1																																																																																				1
TACTAG	1																																																																																				1
TACTAT	1																																																																																				1
TACTCG	1																																																																																				1
TACTGA	1																																																																																				1
TACTTA	1																																																																																				1
TAGAAA	3																																																																																				3
TAGACT	1																																																																																				1
TAGAGT	1																																																																																				1
TAGCAT	1																																																																																				1
TAGCCA	1																																																																																				1
TAGCCG	2																																																																																				2
TAGCTG	1																																																																																				1
TAGGGT		1																																																																																			1
TAGGTA	1																																																																																				1
TAGTGA	2																																																																																				2
TAGTGC	1																																																																																				1
TATAAA	2																																																																																				2
TATAAG	1																																																																																				1
TATAAT		1																																																																																			1
TATACC	1																																																																																				1
TATAGG	2																																																																																				2
TATATC	2																																																																																				2
TATATT	1																																																																																				1
TATCAT		1																																																																																			1
TATCCG	1																																																																																				1
TATCCT	1																																																																																				1
TATCTA	2																																																																																				2
TATCTC			1																																																																																		1
TATCTG	1																																																																																				1
TATGAA	1																																																																																				1
TATGAG	1																																																																																				1
TATGCA	1																																																																																				1
TATGTG	1																																																																																				1
TATTCA	1																																																																																				1
TATTGT	2																																																																																				2
TATTTA	1																																																																																				1
TATTTC	1																																																																																				1
TATTTG	1																																																																																				1
TATTTT	5																																																																																				5
TCAAAA	7	2																																																																																			9
TCAAAC	1																																																																																				1
TCAACT	1																																																																																				1
TCAAGC	1																																																																																				1
TCAATG	1																																																																																				1
TCAATT	1																																																																																				1
TCACAG	1																																																																																				1
TCACCA	1																																																																																				1
TCACTA	1																																																																																				1
TCAGAA	1																																																																																				1
TCATAA	1																																																																																				1
TCATCC	1	1																																																																																			2
TCATTT		1																																																																																			1
TCCAAA	1																																																																																				1
TCCAGT	1																																																																																				1
TCCATC	2																																																																																				2
TCCCGC	1																																																																																				1
TCCCTC	1																																																																																				1
TCCCTG	1																																																																																				1
TCCGCT	1																																																																																				1
TCCTAT	1																																																																																				1
TCCTCA		1																																																																																			1
TCCTCT	1																																																																																				1
TCCTTT	1																																																																																				1
TCGGTT	1																																																																																				1
TCGTCA	1																																																																																				1
TCTATT	1																																																																																				1
TCTGCC	1																																																																																				1
TCTTCA	1																																																																																				1
TCTTCC	1																																																																																				1
TCTTGA		1																																																																																			1
TCTTTA	1	1																																																																																			2
TCTTTT		1																																																																																			1
TGAAAA	6																																																																																				6
TGAAAT	1																																																																																				1
TGACAA	1	2																																																																																			3
TGACAT	2																																																																																				2
TGACCG	1																																																																																				1
TGACTG	1																																																																																				1
TGAGTA	1																																																																																				1
TGATTC		1																																																																																			1
TGATTG	1																																																																																				1
TGATTT	11	2																																																																																			13
TGCAAC	1																																																																																				1
TGCAGT	1																																																																																				1
TGCATT	1																																																																																				1
TGCCAC	1																																																																																				1
TGCGCC	1																																																																																				1
TGCGGC	1																																																																																				1
TGCGGT	1																																																																																				1
TGCGTG			1					1																																																																													2
TGCTGA	1																																																																																				1
TGCTGG		1																																																																																			1
TGGCAA	1																																																																																				1
TGGGTG	1																																																																																				1
TGGTAA	1																																																																																				1
TGGTCA	2																																																																																				2
TGGTCT		1																																																																																			1
TGGTGA	1																																																																																				1
TGGTGC	1																																																																																				1
TGGTGT	1																																																																																				1
TGGTTC	1																																																																																				1
TGTAAG	1																																																																																				1
TGTATA	1																																																																																				1
TGTATG	1																																																																																				1
TGTCAA	1																																																																																				1
TGTCAC	1																																																																																				1
TGTCAT	1																																																																																				1
TGTCTC	1																																																																																				1
TGTGAG	2																																																																																				2
TGTGCG	1							1																																																																													2
TGTGTA	2	1																																																																																			3
TGTTAA	1																																																																																				1
TGTTGG		1	1																																																																																		2
TGTTTC	1																																																																																				1
TGTTTG	1																																																																																				1
TGTTTT	1																																																																																				1
TTAAAA	1																																																																																				1
TTAAAT	1																																																																																				1
TTAACA	2																																																																																				2
TTAACC	1																																																																																				1
TTAAGG	1																																																																																				1
TTAAGT	1																																																																																				1
TTAATA	1																																																																																				1
TTACAA	1																																																																																				1
TTACAC	1																																																																																				1
TTACAT	1																																																																																				1
TTACCC	1																																																																																				1
TTACGT	1																																																																																				1
TTACTA	1																																																																																				1
TTACTG	1																																																																																				1
TTACTT	1																																																																																				1
TTAGAT	1																																																																																				1
TTAGTA	1																																																																																				1
TTATAT	1																																																																																				1
TTATCT	1																																																																																				1
TTATGA	1																																																																																				1
TTATTG	1																																																																																				1
TTATTT	4																																																																																				4
TTCAAA	1																																																																																				1
TTCAAT	2																																																																																				2
TTCACA	1																																																																																				1
TTCATA	1	1																																																																																			2
TTCATT	1																																																																																				1
TTCGAA	1																																																																																				1
TTCGAT	1																																																																																				1
TTCGGT	17																																																																																				17
TTCGTC	1																																																																																				1
TTCTCT	1																																																																																				1
TTCTGA				1																																																																																	1
TTCTTA	3																																																																																				3
TTGAAA	5																																																																																				5
TTGAAG	1																																																																																				1
TTGACA	3																																																																																				3
TTGACT	1																																																																																				1
TTGATG	1																																																																																				1
TTGGAA	2																																																																																				2
TTGTAT	1																																																																																				1
TTGTCC	1																																																																																				1
TTGTGG		1																																																																																			1
TTGTGT	1																																																																																				1
TTGTTA	1																																																																																				1
TTGTTT	1																																																																																				1
TTTAAT	5																																																																																				5
TTTACG	1																																																																																				1
TTTAGA	1																																																																																				1
TTTAGG	2																																																																																				2
TTTATA	1																																																																																				1
TTTATC	2																																																																																				2
TTTATG	1																																																																																				1
TTTATT	3																																																																																				3
TTTCAA	6																																																																																				6
TTTCAT	1																																																																																				1
TTTCCT	1																																																																																				1
TTTCGG	12																																																																																				12
TTTCTA	3																																																																																				3
TTTCTG	1																																																																																				1
TTTCTT	2																																																																																				2
TTTGAA	8	1																																																																																			9
TTTGAT	1																																																																																				1
TTTGTA	3																																																																																				3
TTTTAA	1																																																																																				1
TTTTAC	2																																																																																				2
TTTTAT	7																																																																																				7
TTTTGA	4																																																																																				4
TTTTGT	1	1																																																																																			2
TTTTTA	8																																																																																				8
TTTTTC	3																																																																																				3
TTTTTG	1																																																																																				1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	36	17	14	17	21	5	7	5	10	10	6		8	4		3	2	2	2	1	1	1	2	1	2				1	3	2	1		2	2	2			1	1	1	2				1				1					1	1	4	3									1	207
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	28	23	22	12	25	14	12	18	15	12	3	6	9	9	8	4	10	9	5	6	1	2	2	3	1	4	3		3	3	1	3	1	2		1	1				1	1																										283
AC/GT	-	-	-	488	246	140	106	66	38	24	25	24	12	8	7	11	1	6	4	8	2	5	1	1	2	3	1			2				1		3		1																																															1236
AG/CT	-	-	-	346	187	102	78	47	18	13	4		2		1			1																																																																			799
AT/AT	-	-	-	505	219	116	81	48	33	26	14	11	9	4	3	2	4		2	1																																																																	1078
CG/CG	-	-	-	18	1			2																																																																													21
AAC/GTT	-	-	52	15	5																																																																																72
AAG/CTT	-	-	356	169	39	16	3	1	2	1																																																																											587
AAT/ATT	-	-	891	196	40	16	7	3																																																																													1153
ACC/GGT	-	-	15	7			2	1																																																																													25
ACG/CGT	-	-	14	3	1	1																																																																															19
ACT/AGT	-	-	51	11	5	3																																																																															70
AGC/CTG	-	-	27	11	3	2	2																																																																														45
AGG/CCT	-	-	20	2	2	1	1	1																																																																													27
ATC/ATG	-	-	49	16	4	1			1																																																																												71
CCG/CGG	-	-	30	6	8	2	1			1																																																																											48
AAAC/GTTT	-	109	8	2		3	1																																																																														123
AAAG/CTTT	-	187	40	13	2		1			1					1			1																																																																			246
AAAT/ATTT	-	2252	316	44	15	3	2	3	3		1						1																																																																				2640
AACC/GGTT	-	19	1	2						1																																																																											23
AACG/CGTT	-	6	3																																																																																		9
AACT/AGTT	-	20	3	1		1																																																																															25
AAGC/CTTG	-	15	2																																																																																		17
AAGG/CCTT	-	25	11	7	6	2	4	4	5	9	4	5			1	1	2																																																																				86
AAGT/ACTT	-	73	9		2		1																																																																														85
AATC/ATTG	-	61	12	3																																																																																	76
AATG/ATTC	-	102	21	12	3	6	3	2										1																																																																			150
AATT/AATT	-	92	13	1																																																																																	106
ACAG/CTGT	-	72	17	1	1	2					2		1																																																																								96
ACAT/ATGT	-	251	33	9	1		2		4	1																																																																											301
ACCC/GGGT	-	1																																																																																			1
ACCG/CGGT	-	6	2																																																																																		8
ACCT/AGGT	-	531	85	9	5	2		1																																																																													633
ACGC/CGTG	-	15	6	1		4		2																																																																													28
ACGG/CCGT	-	12	9																																																																																		21
ACGT/ACGT	-	13																																																																																			13
ACTC/AGTG	-	9	1	2	1			2																																																																													15
ACTG/AGTC	-	38	5	2																																																																																	45
AGAT/ATCT	-	75	18	3	1	1																																																																															98
AGCC/CTGG	-	4																																																																																			4
AGCG/CGCT	-	4																																																																																			4
AGCT/AGCT	-	4																																																																																			4
AGGC/CCTG	-	7	1																																																																																		8
AGGG/CCCT	-	2	1																																																																																		3
ATCC/ATGG	-	83	16	3	1																																																																																103
ATCG/ATCG	-	3																																																																																			3
ATGC/ATGC	-	12	1																																																																																		13
CCCG/CGGG	-	2																																																																																			2
AAAAC/GTTTT	125	4	1	1																																																																																	131
AAAAG/CTTTT	102	7																																																																																			109
AAAAT/ATTTT	1136	51	9		2	2		1					1																																																																								1202
AAACC/GGTTT	28																																																																																				28
AAACG/CGTTT	19	1																																																																																			20
AAACT/AGTTT	81	8	2																																																																																		91
AAAGC/CTTTG	26	1																																																																																			27
AAAGG/CCTTT	16	1																																																																																			17
AAAGT/ACTTT	63	4		2	1																																																																																70
AAATC/ATTTG	218	14	4	1																																																																																	237
AAATG/ATTTC	178	17		3																																																																																	198
AAATT/AATTT	397	20	6	1																																																																																	424
AACAC/GTGTT	52	3	1																																																																																		56
AACAG/CTGTT	27	1	1																																																																																		29
AACAT/ATGTT	65	4	1	1																																																																																	71
AACCC/GGGTT	8																																																																																				8
AACCG/CGGTT	4																																																																																				4
AACCT/AGGTT	212	42	17	7	10	6	9	17	4	11	8	12	15																																																																								370
AACGC/CGTTG	4																																																																																				4
AACGG/CCGTT	4																																																																																				4
AACGT/ACGTT	44	3	1																																																																																		48
AACTC/AGTTG	19																																																																																				19
AACTG/AGTTC	36	2																																																																																			38
AACTT/AAGTT	27	4																																																																																			31
AAGAC/CTTGT	28			1																																																																																	29
AAGAG/CTCTT	44		1																																																																																		45
AAGAT/ATCTT	45	6	2																																																																																		53
AAGCC/CTTGG	8	1																																																																																			9
AAGCG/CGCTT	8		1																																																																																		9
AAGCT/AGCTT	26	1																																																																																			27
AAGGC/CCTTG	3																																																																																				3
AAGGG/CCCTT	3	1																																																																																			4
AAGGT/ACCTT	75	7	2																																																																																		84
AAGTC/ACTTG	21	3																																																																																			24
AAGTG/ACTTC	21	2																																																																																			23
AATAC/ATTGT	170	20	5	2	2	1						1																																																																									201
AATAG/ATTCT	65	7	2	2	1		1																																																																														78
AATAT/ATATT	218	5																																																																																			223
AATCC/ATTGG	25																																																																																				25
AATCG/ATTCG	34	5	1																																																																																		40
AATCT/AGATT	52	2	1		1																																																																																56
AATGC/ATTGC	30	3																																																																																			33
AATGG/ATTCC	40	20	5	1		3		1				1																																																																									71
AATGT/ACATT	112	9	1	2	1																																																																																125
AATTC/AATTG	379	72	6	3		1	1																																																																														462
ACACC/GGTGT	20	1																																																																																			21
ACACG/CGTGT	22	4																																																																																			26
ACACT/AGTGT	49	5	2		1	1																																																																															58
ACAGC/CTGTG	15																																																																																				15
ACAGG/CCTGT	11	1	1																																																																																		13
ACAGT/ACTGT	41	3	1																																																																																		45
ACATC/ATGTG	54	2																																																																																			56
ACATG/ATGTC	69	6																																																																																			75
ACCAG/CTGGT	5																																																																																				5
ACCAT/ATGGT	31	4	1			1	1																																																																														38
ACCCC/GGGGT	3																																																																																				3
ACCCG/CGGGT	1																																																																																				1
ACCCT/AGGGT	14	2	1																																																																																		17
ACCGC/CGGTG	4	2																																																																																			6
ACCGG/CCGGT	4																																																																																				4
ACCGT/ACGGT	10	2		1																																																																																	13
ACCTC/AGGTG	19	3																																																																																			22
ACCTG/AGGTC	14	1																																																																																			15
ACGAG/CGTCT	14																																																																																				14
ACGAT/ATCGT	39	4																																																																																			43
ACGCC/CGTGG	8	1																																																																																			9
ACGCG/CGCGT	15		1																																																																																		16
ACGCT/AGCGT	17																																																																																				17
ACGGC/CCGTG	3																																																																																				3
ACGGG/CCCGT	3																																																																																				3
ACGTC/ACGTG	36	8	1																																																																																		45
ACTAG/AGTCT	36	5																																																																																			41
ACTAT/AGTAT	72	11	3			2	1																																																																														89
ACTCC/AGTGG	9	1																																																																																			10
ACTCG/AGTCG	10																																																																																				10
ACTCT/AGAGT	21	4																																																																																			25
ACTGC/AGTGC	19																																																																																				19
ACTGG/AGTCC	12	1																																																																																			13
AGAGC/CTCTG	5																																																																																				5
AGAGG/CCTCT	22	2	1		1		1		2																																																																												29
AGATC/ATCTG	21	1																																																																																			22
AGATG/ATCTC	26																																																																																				26
AGCAT/ATGCT	33																																																																																				33
AGCCC/CTGGG	2																																																																																				2
AGCCG/CGGCT	4																																																																																				4
AGCCT/AGGCT	16																																																																																				16
AGCGC/CGCTG	8																																																																																				8
AGCGG/CCGCT	5																																																																																				5
AGCTC/AGCTG	15																																																																																				15
AGGAT/ATCCT	27	7					1																																																																														35
AGGCC/CCTGG	5																																																																																				5
AGGCG/CCTCG	5																																																																																				5
AGGGC/CCCTG	3	1	1																																																																																		5
AGGGG/CCCCT	11				1																																																																																12
ATATC/ATATG	33	1																																																																																			34
ATCCC/ATGGG	13	2																																																																																			15
ATCCG/ATCGG	8																																																																																				8
ATCGC/ATGCG	15																																																																																				15
ATGCC/ATGGC	9	2																																																																																			11
CCCCG/CGGGG	2																																																																																				2
CCGCG/CGCGG	19	1																																																																																			20
AAAAAC/GTTTTT	4	1																																																																																			5
AAAAAG/CTTTTT	8	1																																																																																			9
AAAAAT/ATTTTT	67	2																																																																																			69
AAAACT/AGTTTT	3																																																																																				3
AAAAGC/CTTTTG		1																																																																																			1
AAAAGG/CCTTTT	3																																																																																				3
AAAAGT/ACTTTT	4																																																																																				4
AAAATC/ATTTTG	38	5	2																																																																																		45
AAAATG/ATTTTC	18	1																																																																																			19
AAAATT/AATTTT	26																																																																																				26
AAACAC/GTGTTT	4																																																																																				4
AAACAG/CTGTTT	3																																																																																				3
AAACAT/ATGTTT	1	1																																																																																			2
AAACCC/GGGTTT	1																																																																																				1
AAACCG/CGGTTT	86	2																																																																																			88
AAACCT/AGGTTT	6																																																																																				6
AAACGC/CGTTTG	1																																																																																				1
AAACGT/ACGTTT	2																																																																																				2
AAACTC/AGTTTG	3																																																																																				3
AAACTG/AGTTTC	2																																																																																				2
AAACTT/AAGTTT	6																																																																																				6
AAAGAC/CTTTGT	1																																																																																				1
AAAGAG/CTCTTT	2																																																																																				2
AAAGAT/ATCTTT	5	2																																																																																			7
AAAGCT/AGCTTT	2																																																																																				2
AAAGGC/CCTTTG	1																																																																																				1
AAAGGT/ACCTTT	1																																																																																				1
AAAGTC/ACTTTG	3																																																																																				3
AAAGTT/AACTTT	1																																																																																				1
AAATAC/ATTTGT	30	1																																																																																			31
AAATAG/ATTTCT	16																																																																																				16
AAATAT/ATATTT	15																																																																																				15
AAATCC/ATTTGG	2																																																																																				2
AAATCG/ATTTCG	2																																																																																				2
AAATCT/AGATTT	4																																																																																				4
AAATGC/ATTTGC	3																																																																																				3
AAATGT/ACATTT	4																																																																																				4
AAATTC/AATTTG	17	2																																																																																			19
AAATTG/AATTTC	18	1	3	1																																																																																	23
AAATTT/AAATTT	8																																																																																				8
AACAAT/ATTGTT	5																																																																																				5
AACACC/GGTGTT	1	1	1																																																																																		3
AACACT/AGTGTT	1																																																																																				1
AACAGC/CTGTTG	1																																																																																				1
AACAGT/ACTGTT	1	1																																																																																			2
AACATC/ATGTTG	1	1																																																																																			2
AACATT/AATGTT	5																																																																																				5
AACCAC/GGTTGT		1																																																																																			1
AACCAG/CTGGTT	4	1																																																																																			5
AACCAT/ATGGTT	1																																																																																				1
AACCCT/AGGGTT		1																																																																																			1
AACCGC/CGGTTG	3		3																																																																																		6
AACCGG/CCGGTT	1																																																																																				1
AACCTC/AGGTTG		1																																																																																			1
AACCTT/AAGGTT	4																																																																																				4
AACGAT/ATCGTT	3																																																																																				3
AACGCG/CGCGTT	2																																																																																				2
AACGCT/AGCGTT	1																																																																																				1
AACGGG/CCCGTT	1	1																																																																																			2
AACGGT/ACCGTT	1																																																																																				1
AACGTC/ACGTTG	2																																																																																				2
AACGTG/ACGTTC	1																																																																																				1
AACGTT/AACGTT	1																																																																																				1
AACTAC/AGTTGT	2																																																																																				2
AACTAG/AGTTCT	3																																																																																				3
AACTCT/AGAGTT	1	2																																																																																			3
AACTGC/AGTTGC	2																																																																																				2
AACTGG/AGTTCC	1																																																																																				1
AACTGT/ACAGTT	1																																																																																				1
AACTTC/AAGTTG	3																																																																																				3
AACTTG/AAGTTC	1																																																																																				1
AAGAAT/ATTCTT	9		1																																																																																		10
AAGACC/CTTGGT	2	3	1																																																																																		6
AAGACG/CGTCTT	1																																																																																				1
AAGACT/AGTCTT	1																																																																																				1
AAGAGG/CCTCTT	2																																																																																				2
AAGATC/ATCTTG		1																																																																																			1
AAGATG/ATCTTC	2																																																																																				2
AAGATT/AATCTT	2																																																																																				2
AAGCAC/CTTGTG	1																																																																																				1
AAGCAT/ATGCTT	1																																																																																				1
AAGCCT/AGGCTT	1																																																																																				1
AAGCGG/CCGCTT	4																																																																																				4
AAGCTC/AGCTTG	1																																																																																				1
AAGCTG/AGCTTC	1																																																																																				1
AAGGAC/CCTTGT	4																																																																																				4
AAGGAG/CCTTCT	4																																																																																				4
AAGGAT/ATCCTT	5																																																																																				5
AAGGCC/CCTTGG	2																																																																																				2
AAGGGT/ACCCTT	3																																																																																				3
AAGGTG/ACCTTC	3																																																																																				3
AAGTAC/ACTTGT	3																																																																																				3
AAGTAG/ACTTCT	1																																																																																				1
AAGTAT/ACTTAT	4																																																																																				4
AAGTCG/ACTTCG	1																																																																																				1
AAGTCT/ACTTAG	1																																																																																				1
AAGTGC/ACTTGC	1																																																																																				1
AAGTGG/ACTTCC	1																																																																																				1
AAGTGT/ACACTT	2																																																																																				2
AATACC/ATTGGT	1	1																																																																																			2
AATACG/ATTCGT	2																																																																																				2
AATACT/AGTATT	5																																																																																				5
AATAGC/ATTGCT	1																																																																																				1
AATAGG/ATTCCT	2																																																																																				2
AATAGT/ACTATT	4																																																																																				4
AATATC/ATATTG	4																																																																																				4
AATATG/ATATTC	7	2																																																																																			9
AATATT/AATATT	5																																																																																				5
AATCAC/ATTGTG	1																																																																																				1
AATCAG/ATTCTG	6	2		1	2																																																																																11
AATCAT/ATGATT	5																																																																																				5
AATCCT/AGGATT	5																																																																																				5
AATCGT/ACGATT	1																																																																																				1
AATCTC/AGATTG	2																																																																																				2
AATCTG/AGATTC	2																																																																																				2
AATGAC/ATTGTC	3	2																																																																																			5
AATGAT/ATCATT	5	4																																																																																			9
AATGCG/ATTCGC	1																																																																																				1
AATGCT/AGCATT	2																																																																																				2
AATGGC/ATTGCC	2																																																																																				2
AATGGT/ACCATT	3																																																																																				3
AATGTC/ACATTG	11																																																																																				11
AATGTG/ACATTC	2																																																																																				2
AATTAC/AATTGT	4	1																																																																																			5
AATTAG/AATTCT	2																																																																																				2
AATTAT/AATTAT	3	1																																																																																			4
AATTCC/AATTGG	2																																																																																				2
AATTCG/AATTCG	2																																																																																				2
AATTGC/AATTGC	1																																																																																				1
ACACAT/ATGTGT	4	4	1																																																																																		9
ACACCC/GGGTGT	2																																																																																				2
ACACCT/AGGTGT	1																																																																																				1
ACACGC/CGTGTG	12	2	3			1		2																																																																													20
ACACGT/ACGTGT	1																																																																																				1
ACACTC/AGTGTG	3																																																																																				3
ACACTG/AGTGTC	1		1																																																																																		2
ACAGAG/CTCTGT	2	1																																																																																			3
ACAGAT/ATCTGT	2																																																																																				2
ACAGCC/CTGTGG	1																																																																																				1
ACAGCT/AGCTGT	1																																																																																				1
ACAGGG/CCCTGT	1																																																																																				1
ACAGGT/ACCTGT	2																																																																																				2
ACAGTC/ACTGTG	5																																																																																				5
ACAGTG/ACTGTC	6																																																																																				6
ACATAT/ATATGT	6																																																																																				6
ACATCC/ATGTGG	1																																																																																				1
ACATGC/ATGTGC	2																																																																																				2
ACATGG/ATGTCC	1																																																																																				1
ACCACG/CGTGGT	1																																																																																				1
ACCACT/AGTGGT	1																																																																																				1
ACCAGC/CTGGTG	1	1																																																																																			2
ACCAGG/CCTGGT	1																																																																																				1
ACCAGT/ACTGGT	1																																																																																				1
ACCATC/ATGGTG	4																																																																																				4
ACCATG/ATGGTC	4																																																																																				4
ACCCCC/GGGGGT	1	1																																																																																			2
ACCCCT/AGGGGT	1																																																																																				1
ACCCGC/CGGGTG	3	3																																																																																			6
ACCCGT/ACGGGT	2																																																																																				2
ACCCTC/AGGGTG		2																																																																																			2
ACCGCC/CGGTGG	2																																																																																				2
ACCGCG/CGCGGT	4																																																																																				4
ACCGCT/AGCGGT	1																																																																																				1
ACCGGC/CCGGTG	1																																																																																				1
ACCGGG/CCCGGT	3																																																																																				3
ACCGGT/ACCGGT	2																																																																																				2
ACCGTC/ACGGTG	1																																																																																				1
ACCGTG/ACGGTC	3																																																																																				3
ACCTAT/AGGTAT	13																																																																																				13
ACCTCC/AGGTGG	1																																																																																				1
ACCTCT/AGAGGT	2																																																																																				2
ACCTGC/AGGTGC	1	1																																																																																			2
ACGACT/AGTCGT	1																																																																																				1
ACGAGT/ACTCGT	1																																																																																				1
ACGATG/ATCGTC	2	1																																																																																			3
ACGCAG/CGTCTG	2																																																																																				2
ACGCCC/CGTGGG	2																																																																																				2
ACGCCG/CGGCGT	1	1																																																																																			2
ACGCGC/CGCGTG	5																																																																																				5
ACGCGG/CCGCGT	1																																																																																				1
ACGGAT/ATCCGT	5																																																																																				5
ACGGCC/CCGTGG	1																																																																																				1
ACGGCG/CCGTCG	3																																																																																				3
ACGGCT/AGCCGT	3																																																																																				3
ACGTAG/ACGTCT	2																																																																																				2
ACGTCC/ACGTGG	1																																																																																				1
ACTAGC/AGTGCT	1																																																																																				1
ACTAGG/AGTCCT	1																																																																																				1
ACTAGT/ACTAGT	1																																																																																				1
ACTATC/AGTGAT	7																																																																																				7
ACTATG/AGTCAT	1																																																																																				1
ACTCAG/AGTCTG	2																																																																																				2
ACTCAT/AGTATG	4																																																																																				4
ACTCCC/AGTGGG		1																																																																																			1
ACTCGC/AGTGCG	2																																																																																				2
ACTCTC/AGAGTG		1																																																																																			1
ACTGAG/AGTCTC	1																																																																																				1
ACTGAT/AGTATC	1																																																																																				1
ACTGCC/AGTGGC	1																																																																																				1
ACTGCG/AGTCGC	1																																																																																				1
ACTGCT/AGCAGT		1																																																																																			1
AGAGAT/ATCTCT	1		1																																																																																		2
AGAGCC/CTCTGG	1																																																																																				1
AGAGCT/AGCTCT	1																																																																																				1
AGAGGC/CCTCTG	1																																																																																				1
AGAGGG/CCCTCT	2																																																																																				2
AGATAT/ATATCT	5																																																																																				5
AGATCC/ATCTGG	3																																																																																				3
AGATCT/AGATCT	1																																																																																				1
AGATGG/ATCTCC	4																																																																																				4
AGCATC/ATGCTG	2																																																																																				2
AGCCAT/ATGGCT	1																																																																																				1
AGCCCC/CTGGGG			1																																																																																		1
AGCCCG/CGGGCT	1																																																																																				1
AGCCCT/AGGGCT	1																																																																																				1
AGCCGC/CGGCTG	1																																																																																				1
AGCCGG/CCGGCT						1																																																																															1
AGCGCC/CGCTGG	1																																																																																				1
AGCGGC/CCGCTG	1																																																																																				1
AGCGGG/CCCGCT	5	1																																																																																			6
AGCTAT/AGCTAT	1																																																																																				1
AGCTCC/AGCTGG	1																																																																																				1
AGGATG/ATCCTC	2	2																																																																																			4
AGGCGC/CCTGCG	4																																																																																				4
AGGGAT/ATCCCT	1																																																																																				1
AGGGGG/CCCCCT	2	1																																																																																			3
ATATCG/ATATCG	2																																																																																				2
ATATGC/ATATGC	1																																																																																				1
ATCCGC/ATGCGG	2																																																																																				2
ATCGCC/ATGGCG	2																																																																																				2
ATCGGC/ATGCCG	2																																																																																				2
ATGCGC/ATGCGC	1																																																																																				1
ATGGCC/ATGGCC	1																																																																																				1
CCCCCG/CGGGGG	1																																																																																				1
CCCGCG/CGCGGG	1																																																																																				1
CCGGCG/CCGGCG	2																																																																																				2
