Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018231025.1/fasta/hub_GCA_018231025.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              389381
Total size of examined sequences (bp):           188600971
Total number of identified SSRs:                 26858
Number of SSR containing sequences:              24906
Number of sequences containing more than 1 SSR:  1660
Number of SSRs present in compound formation:    1188


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	636
2	4049
3	3756
4	7801
5	8591
6	2025

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	26	17	12	5	6	5	8	4	5	2	3	2	1	4		2		1			1		1		1				1		3		2	1		1								1						1			1			2			119
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	12	10	13	8	7	6	10	4	15	5	6	7	5	1	10	5	2	3		2	3	1	5	3	1	3		1		1	1	1	1	2				1											2										157
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	11	17	15	12	16	10	11	5	9	8	5	10	7	8	4	3	3	1	2			2	1	1	1	1	1		1	2	1						1	1		1													1						172
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	28	25	22	20	8	6	7	6	9	5	1	4	2	1	5		3	4	1		1			2		2		2		4	2			1	1						1	1			1		1	1						1	1	1	4	4	188
AC	-	-	-	232	95	67	30	31	16	6	5	5	5		1	3	1		1			3	1													1																																								503
AG	-	-	-	104	58	31	12	12	6	6	2	3	1	1		1					1	1		1																																																				240
AT	-	-	-	271	110	60	29	23	16	9	5	3	4	1	1	1	1																																																											534
CA	-	-	-	157	60	45	37	23	12	6	10	6	6	2	3	2				1		2		2		2		1		1	1																																													379
CG	-	-	-	9	2		1																																																																					12
CT	-	-	-	67	38	18	11	5	8	2	3	4	1				1			1			1	1												1																																								162
GA	-	-	-	73	40	26	15	8	4	3	3	3	3		1	1						1	1																																																					182
GC	-	-	-	28				1																																																																				29
GT	-	-	-	164	74	52	31	18	17	9	3	5	7	2	3	1	3	1		3	1				1	1			1		1												1																																	399
TA	-	-	-	352	107	57	39	26	14	7	7	9	5	1		1							1																																																					626
TC	-	-	-	135	68	45	30	13	13	5	5	4	3	1	1	1		2	1			1					1		1		1																																													331
TG	-	-	-	269	118	79	62	31	24	18	6	9	9	3	3	2	3	3	2			2		4	1	1			1				1			1																																								652
AAC	-	-	10	3	1		1																																																																					15
AAG	-	-	12	2		1	1																1																																																					17
AAT	-	-	297	55	20	2	2	2																																																																				378
ACA	-	-	5	2	1																																																																							8
ACC	-	-	3	3		1																																																																						7
ACT	-	-	8	4																																																																								12
AGA	-	-	8	6	1		1	2	1										1																																																									20
AGC	-	-	3	1																																																																								4
AGG	-	-	2		1																																																																							3
AGT	-	-	9	2																																																																								11
ATA	-	-	286	68	21	12	2		1				1																																																															391
ATC	-	-	82	17	2	4	1																																																																					106
ATG	-	-	28	8	6	1	1																																																																					44
ATT	-	-	258	64	17	8	1	2																																																																				350
CAA	-	-	10	10	1	1																																																																						22
CAC	-	-	5	2	1																																																																							8
CAG	-	-	4																																																																									4
CAT	-	-	34	9	2	1																																																																						46
CCA	-	-	9	4	2			1																																																																				16
CCG	-	-	27	9	7	3	1	4																																																																				51
CCT	-	-	3																																																																									3
CGA	-	-	1	1																																																																								2
CGC	-	-	19	12	2	3																																																																						36
CGG	-	-	14	3	4	1		2																																																																				24
CGT	-	-	2																																																																									2
CTA	-	-	18	2	2	1																																																																						23
CTC	-	-	1																																																																									1
CTG	-	-	1												1																																																													2
CTT	-	-	15	3	1					1						1								1																																																				22
GAA	-	-	7	5	1	1	2	1							1				1																																																									19
GAC	-	-	2	2																																																																								4
GAG	-	-	4	2	1																																																																							7
GAT	-	-	25	7			2																																																																					34
GCA	-	-	3		1																																																																							4
GCC	-	-	13	11	2	1																																																																						27
GCG	-	-	28	10	2	2	1																																																																					43
GCT	-	-	3	2		1																																																																						6
GGA	-	-	1	1																																																																								2
GGC	-	-	33	12	5	2																																																																						52
GGT	-	-	6	1	1	1																																																																						9
GTA	-	-	12	3	1																																																																							16
GTC	-	-	4																																																																									4
GTG	-	-	7	1	1	1																																																																						10
GTT	-	-	10	2																																																																								12
TAA	-	-	265	80	12	4	3	2																																																																				366
TAC	-	-	22	6	1	1	1																																																																					31
TAG	-	-	11	3	1																																																																							15
TAT	-	-	306	63	13	6	2	2																																																																				392
TCA	-	-	142	32	13	1	1																																																																					189
TCC	-	-	2	1																																																																								3
TCG	-	-	3																																																																									3
TCT	-	-	17	5	4						2		3		1			1		1	1		1																																																					36
TGA	-	-	167	28	10	3	1	1					1																																																															211
TGC	-	-	4		1			1																																																																				6
TGG	-	-	13	3		2	1		1																																																																			20
TGT	-	-	13	7	4																																																																							24
TTA	-	-	342	99	26	9	5	1		1																																																																		483
TTC	-	-	26	13	6	3		1	1		1	1	2				3		2	1	1	2	5																																																					68
TTG	-	-	20	9	2		1																																																																					32
AAAC	-	41	12	2		1	2	2	1	1			1	2			1																																																											66
AAAG	-	11	4	1	1																																																																							17
AAAT	-	283	38	11	2	1	1																																																																					336
AACA	-	38	5	4		2					1	1																																																																51
AACC	-	1																																																																										1
AACG	-	2																																																																										2
AACT	-	1																																																																										1
AAGA	-	8	1	1																																																																								10
AAGC	-	2																																																																										2
AAGG	-	3																																																																										3
AAGT	-	2																																																																										2
AATA	-	315	59	24	13	2	4	1	2																																																																			420
AATC	-	14																																																																										14
AATG	-	21	6	5	1		1	1	1								1																																																											37
AATT	-	47	7																																																																									54
ACAA	-	40	4	3	2	1	2	2	1	1																																																																		56
ACAG	-	210	97	44	12	4	6	5	3	1					1		1																																																											384
ACAT	-	61	14	3	1		1			1		1																																																																82
ACCA	-	2	1																																																																									3
ACCG	-	1	1		1																																																																							3
ACCT	-	14			1																																																																							15
ACGA	-	2																																																																										2
ACGG	-	1																																																																										1
ACGT	-	2	1																																																																									3
ACTA	-	2														1																																																												3
ACTC	-	6		1																																																																								7
ACTG	-	3	1																																																																									4
ACTT	-	3																																																																										3
AGAA	-	18	3	3	1		1																																																																					26
AGAC	-	31	10	1												1																																																												43
AGAT	-	7	1						1																																																																			9
AGCA	-	1																																																																										1
AGCC	-	1																																																																										1
AGCG	-	7																																																																										7
AGCT	-	2																																																																										2
AGGA	-	1																																																																										1
AGGC	-	3																																																																										3
AGGG	-	1																																																																										1
AGGT	-	20																																																																										20
AGTA	-	9	1																																																																									10
AGTC	-	3																																																																										3
AGTG	-	1	1		1																																																																							3
AGTT	-	3										1																																																																4
ATAA	-	270	61	18	10		3		1																																																																			363
ATAC	-	79	12	4	2	1					1			1	1																																																													101
ATAG	-	24	6	2		1				1																																																																		34
ATCA	-	8					1																																																																					9
ATCC	-	36	14	1	1		1																																																																					53
ATCG	-	1																																																																										1
ATCT	-	22	3		1																																																																							26
ATGA	-	12	3	1		1		2																																																																				19
ATGC	-	1	1																																																																									2
ATGG	-	19	2																																																																									21
ATGT	-	49	6		1																																																																							56
ATTA	-	47	5	1																																																																								53
ATTC	-	33	19	2	2	1			2	1																																																																		60
ATTG	-	6	7																																																																									13
ATTT	-	202	63	14	6	2	2								2																																																													291
CAAA	-	128	44	13	7			4	4																																																																			200
CAAG	-	2																																																																										2
CAAT	-	2																																																																										2
CACG	-	3																																																																										3
CACT	-	5	1																																																																									6
CAGA	-	38	27	7	7	2	2							1																																																														84
CAGC	-	1																																																																										1
CAGT	-		1																																																																									1
CATA	-	32	7	2		1									1																																																													43
CATC	-	46	18	3	1	1																																																																						69
CATG	-	2																																																																										2
CATT	-	17	4	1	1	1	3																																																																					27
CCAA	-	1	1																																																																									2
CCAT	-	20	7	3	1																																																																							31
CCGC	-	2																																																																										2
CCGT	-	2		1																																																																								3
CCTA	-	10	3																																																																									13
CCTT	-		2																																																																									2
CGAA	-	1																																																																										1
CGAC	-	1																																																																										1
CGAG	-	2																																																																										2
CGAT	-	1																																																																										1
CGCT	-	3																																																																										3
CGGA	-	4																																																																										4
CGGT	-	1																																																																										1
CGTA	-	2																																																																										2
CGTC	-	3	1																																																																									4
CGTG	-	2																																																																										2
CGTT	-	1																																																																										1
CTAA	-	2																																																																										2
CTAC	-	30	1																																																																									31
CTAG	-	5																																																																										5
CTAT	-	13	2				1																																																																					16
CTCA	-	3	1																																																																									4
CTCC	-	1																																																																										1
CTCG	-	4																																																																										4
CTGA	-	4																																																																										4
CTGC	-	1	1		1																																																																							3
CTGG	-	1																																																																										1
CTGT	-	20	4	2		1	1		1	1																																																																		30
CTTA	-	1	1																																																																									2
CTTC	-	4		2																																																																								6
CTTT	-	5	2	2						1																																																																		10
GAAA	-	14				1																																																																						15
GAAC	-	5	2																																																																									7
GAAG	-	3																																																																										3
GAAT	-	24	1	2	3		1																																																																					31
GACA	-	37	12	7	2	2		1	1	1	1	1																																																																65
GACG	-	5		1																																																																								6
GACT	-	2	1																																																																									3
GAGC	-	2																																																																										2
GAGT	-		2																																																																									2
GATA	-	7	3																																																																									10
GATC	-	2	1																																																																									3
GATG	-	122	49	14	2																																																																							187
GATT	-	3	1																																																																									4
GCAA	-	3																																																																										3
GCAC	-	2																																																																										2
GCAG	-	3																																																																										3
GCAT	-	1																																																																										1
GCGT	-			1		1																																																																						2
GCTA	-	1																																																																										1
GCTC	-	2																																																																										2
GCTG	-	2																																																																										2
GCTT	-	2																																																																										2
GGAA	-	2																																																																										2
GGAC	-	3	2																																																																									5
GGAT	-	5	1		3																																																																							9
GGCA	-	1	1																																																																									2
GGCG	-	1																																																																										1
GGCT	-			1																																																																								1
GGTA	-	33	5																																																																									38
GGTT	-	1	1																																																																									2
GTAA	-	3																																																																										3
GTAC	-	4	1	1																																																																								6
GTAG	-	52	9	1																																																																								62
GTAT	-	51	7	6	3	1																																																																						68
GTCA	-	4	1																																																																									5
GTCC	-	1	1																																																																									2
GTCG	-	1																																																																										1
GTCT	-	20	8	1				2				1																																																																32
GTGA	-	4	1	1																																																																								6
GTGC	-	6	1		3																																																																							10
GTTA	-	3											1					1																																																										5
GTTC	-	6	3																																																																									9
GTTG	-	4	1																																																																									5
GTTT	-	134	70	33	22	4	3	4	6	2	2		2		1	1	1																																																											285
TAAA	-	280	73	23	8	1	1	1		1	1																																																																	389
TAAC	-	2	1																																																																									3
TAAG	-	10	3																																																																									13
TAAT	-	39	3																																																																									42
TACA	-	67	11	5	2	1																																																																						86
TACC	-	110	12	2		2																																																																						126
TACG	-	1	1																																																																									2
TACT	-	6	1																																																																									7
TAGA	-	15	4	2		1																																																																						22
TAGC	-	2																																																																										2
TAGG	-	62	5	2																																																																								69
TAGT	-	3																																																																										3
TATC	-	33	11	2	1		1		1																																																																			49
TATG	-	97	22	3	4		2	3	3	1	1																																																																	136
TATT	-	277	41	16	2	2	1						1																																																															340
TCAA	-	4	1	1																																																																								6
TCAC	-	10	1	1																																																																								12
TCAG	-	1																																																																										1
TCAT	-	17	7	3	1	1																																																																						29
TCCA	-	49	12	2																																																																								63
TCGC	-	3	1																																																																									4
TCGG	-	1	1																																																																									2
TCGT	-	2																																																																										2
TCTA	-	17	5	1								1																																																																24
TCTG	-	271	152	50	20	8	2	4	2	2				1	2					1																																																								515
TCTT	-	8	2																																																																									10
TGAA	-	14	9	2	3																																																																							28
TGAC	-	1	1																																																																									2
TGAG	-	2	2	1	2	1					1																																																																	9
TGAT	-	4																																																																										4
TGCA	-	2																																																																										2
TGCC	-	2																																																																										2
TGCG	-	3	1									1																																																																5
TGGA	-	6	1	2																																																																								9
TGGT	-		1																																																																									1
TGTA	-	43	10	5	1	3	2	2																																																																				66
TGTC	-	37	16	4		2	5	1	1		1	2	1	1	1		2																																																											74
TGTT	-	46	6	2			1				1																																																																	56
TTAA	-	26	3				1																																																																					30
TTAC	-	4	1					1																																																																				6
TTAG	-	1																																																																										1
TTAT	-	433	93	9	7	3	1		1																																																																			547
TTCA	-	23	3	8	3	3																																																																						40
TTCC	-	4			1																																																																							5
TTCG	-	3	1																																																																									4
TTCT	-	13		1																																																																								14
TTGA	-	8		1	1																																																																							10
TTGC	-	3																																																																										3
TTGG	-		1																																																																									1
TTGT	-	22	4	1																																																																								27
TTTA	-	316	74	23	11	3	3	1	1						1																																																													433
TTTC	-	27	5	1		1		1								1																																																												36
TTTG	-	40	9	3	1	2			2			3				1			1																																																									62
AAAAC	23	1																																																																										24
AAAAG	13	2																																																																										15
AAAAT	154	6	2																																																																									162
AAACA	14	1																																																																										15
AAACC	1																																																																											1
AAACG	3	1																																																																										4
AAACT	12																																																																											12
AAAGA	10																																																																											10
AAAGC	2																																																																											2
AAAGG	2																																																																											2
AAAGT	5																																																																											5
AAATA	174	10	1																																																																									185
AAATC	16	2	2																																																																									20
AAATG	111	24	9	2	3	1	1			1			1																																																															153
AAATT	113	3																																																																										116
AACAA	17	1																																																																										18
AACAC	2																																																																											2
AACAG	5																																																																											5
AACAT	8																																																																											8
AACCA	5																																																																											5
AACCG		1																																																																										1
AACCT	15	4	4	3	1	1	2	1				1	3																																																															35
AACGA	4																																																																											4
AACGG	1																																																																											1
AACGT	2																																																																											2
AACTA	8																																																																											8
AACTG	7																																																																											7
AACTT	4																																																																											4
AAGAA	6																																																																											6
AAGAC	1																																																																											1
AAGAG	3																																																																											3
AAGAT	9																																																																											9
AAGCA	1																																																																											1
AAGCT	2	1																																																																										3
AAGGA	2																																																																											2
AAGGC	6																																																																											6
AAGGG	1																																																																											1
AAGGT	4																																																																											4
AAGTA	3																																																																											3
AAGTC	1																																																																											1
AAGTG	10																																																																											10
AAGTT	2																																																																											2
AATAA	125	10	2																																																																									137
AATAC	20																																																																											20
AATAG	5																																																																											5
AATAT	35	2																																																																										37
AATCA	28	4																																																																										32
AATCC	2																																																																											2
AATCG	4	1																																																																										5
AATCT	3																																																																											3
AATGA	93	25	9	1	2	1			1	1			1																																																															134
AATGC	5																																																																											5
AATGG	10	1																																																																										11
AATGT	9	3	1																																																																									13
AATTA	66	7	1																																																																									74
AATTC	17	2																																																																										19
AATTG	24	3	1	1																																																																								29
AATTT	126	5																																																																										131
ACAAA	12	2																																																																										14
ACAAC	4	1																																																																										5
ACAAG	1																																																																											1
ACAAT	16	2																																																																										18
ACACA	10																																																																											10
ACACC	3																																																																											3
ACACG	4																																																																											4
ACACT	4	1	1																																																																									6
ACAGA	5																																																																											5
ACAGC	1																																																																											1
ACAGG	3																																																																											3
ACAGT	5																																																																											5
ACATA	6																																																																											6
ACATC	4																																																																											4
ACATG	9	1																																																																										10
ACATT	12																																																																											12
ACCAA	3																																																																											3
ACCAC	1		1																																																																									2
ACCAG	2																																																																											2
ACCAT	5																																																																											5
ACCCA	1																																																																											1
ACCCC	1																																																																											1
ACCCG		1																																																																										1
ACCCT	1																																																																											1
ACCGG	2																																																																											2
ACCGT		1																																																																										1
ACCTA	12	3	2	2	2		4	1	4	3	3	1	2																																																															39
ACCTC	1																																																																											1
ACCTG	2																																																																											2
ACCTT	4																																																																											4
ACGAA	2																																																																											2
ACGAC	5																																																																											5
ACGAT	2																																																																											2
ACGCA	4																																																																											4
ACGCC	1																																																																											1
ACGCG	1	1																																																																										2
ACGGT	2																																																																											2
ACGTA	2																																																																											2
ACGTC	4																																																																											4
ACGTG	5																																																																											5
ACGTT	2	1																																																																										3
ACTAA	11																																																																											11
ACTAC	3																																																																											3
ACTAG	7																																																																											7
ACTAT	3																																																																											3
ACTCA	1																																																																											1
ACTCG	2																																																																											2
ACTCT	3	1																																																																										4
ACTGA	5																																																																											5
ACTGC	1																																																																											1
ACTGT	2	1																																																																										3
ACTTA	2																																																																											2
ACTTC	4																																																																											4
ACTTT	3																																																																											3
AGAAA	7	2																																																																										9
AGAAG	5																																																																											5
AGACA	2																																																																											2
AGACC	2																																																																											2
AGACG	1																																																																											1
AGACT	4																																																																											4
AGAGA	4																																																																											4
AGAGC	1																																																																											1
AGAGG	1																																																																											1
AGAGT	4																																																																											4
AGATA	3																																																																											3
AGATG	1																																																																											1
AGATT	2																																																																											2
AGCAA	4																																																																											4
AGCAG	3																																																																											3
AGCAT	1																																																																											1
AGCCA	1																																																																											1
AGCCG	1																																																																											1
AGCGA	1																																																																											1
AGCGG	1																																																																											1
AGCGT	2																																																																											2
AGCTA	3																																																																											3
AGCTG	1																																																																											1
AGCTT	3																																																																											3
AGGAC	1																																																																											1
AGGAG	1																																																																											1
AGGAT	1																																																																											1
AGGCA	1																																																																											1
AGGCT	1																																																																											1
AGGGG	3																																																																											3
AGGGT	2																																																																											2
AGGTA	6																																																																											6
AGGTC	2																																																																											2
AGGTG	1	1	1																																																																									3
AGGTT	26	3	3	1		1	1		1			2	1																																																															39
AGTAA	6	1																																																																										7
AGTAC	2																																																																											2
AGTAG	5																																																																											5
AGTAT	2																																																																											2
AGTCA	4																																																																											4
AGTCC		1																																																																										1
AGTCG		1																																																																										1
AGTCT	7																																																																											7
AGTGA	2	1																																																																										3
AGTGC	1																																																																											1
AGTGG	2																																																																											2
AGTGT	3																																																																											3
AGTTA	1																																																																											1
AGTTC	4																																																																											4
AGTTG	1																																																																											1
AGTTT	8	1																																																																										9
ATAAA	114	4																																																																										118
ATAAC	7																																																																											7
ATAAG	3	1																																																																										4
ATAAT	43	1																																																																										44
ATACA	22	1	2																																																																									25
ATACC	5																																																																											5
ATACG	3																																																																											3
ATACT	8																																																																											8
ATAGA	23																																																																											23
ATAGC	2																																																																											2
ATAGG	6	1				1																																																																						8
ATAGT	4	1																																																																										5
ATATA	30																																																																											30
ATATC	5																																																																											5
ATATG	4																																																																											4
ATATT	33	3																																																																										36
ATCAA	18	1	1																																																																									20
ATCAC	4																																																																											4
ATCAG	1																																																																											1
ATCAT	4																																																																											4
ATCCA	2																																																																											2
ATCCC	1																																																																											1
ATCCG	3																																																																											3
ATCCT	8	1																																																																										9
ATCGA	5	1																																																																										6
ATCGG	1																																																																											1
ATCGT	3	1																																																																										4
ATCTA	9																																																																											9
ATCTC	1																																																																											1
ATCTG	1	1																																																																										2
ATCTT	3																																																																											3
ATGAA	111	34	8	2		2	1	2																																																																				160
ATGAC	16																																																																											16
ATGAG	2																																																																											2
ATGAT	1																																																																											1
ATGCA	3																																																																											3
ATGCG	2																																																																											2
ATGCT	6																																																																											6
ATGGA	4																																																																											4
ATGGC	2																																																																											2
ATGGT	3																																																																											3
ATGTA	19	2		1																																																																								22
ATGTC	16	1																																																																										17
ATGTG	11																																																																											11
ATGTT	5																																																																											5
ATTAA	59	5																																																																										64
ATTAC	16	1																																																																										17
ATTAG	6	2																																																																										8
ATTAT	26	1																																																																										27
ATTCA	15	5																																																																										20
ATTCC	4	1																																																																										5
ATTCG	1																																																																											1
ATTCT	7																																																																											7
ATTGA	10																																																																											10
ATTGC	4																																																																											4
ATTGG	4																																																																											4
ATTGT	9																																																																											9
ATTTA	86	1																																																																										87
ATTTC	284	91	37	16	8	4	2	1																																																																				443
ATTTG	21	3																																																																										24
ATTTT	142	5		1																																																																								148
CAAAA	11	1																																																																										12
CAAAC	3																																																																											3
CAAAG	4																																																																											4
CAAAT	10	2																																																																										12
CAACA	7																																																																											7
CAACG	4																																																																											4
CAACT	1	1																																																																										2
CAAGA	2	1																																																																										3
CAAGG	2																																																																											2
CAATA	4	1																																																																										5
CAATC	3		1																																																																									4
CAATG	1																																																																											1
CAATT	6																																																																											6
CACAA	16																																																																											16
CACAC	7	2																																																																										9
CACAG	4																																																																											4
CACAT	3																																																																											3
CACCA	3	1	1																																																																									5
CACCC	1																																																																											1
CACCG	3																																																																											3
CACGA	5																																																																											5
CACGC	2		1																																																																									3
CACGT	1																																																																											1
CACTA	8																																																																											8
CACTG	4																																																																											4
CAGAA	2	1																																																																										3
CAGAC	1																																																																											1
CAGAT	1																																																																											1
CAGCT	1																																																																											1
CAGTA	3																																																																											3
CAGTG	3																																																																											3
CAGTT	3																																																																											3
CATAA	8																																																																											8
CATAC	6																																																																											6
CATAG	5																																																																											5
CATAT	1																																																																											1
CATCA	4																																																																											4
CATGA	11																																																																											11
CATGG	2																																																																											2
CATGT	6																																																																											6
CATTA	6	1																																																																										7
CATTC	2	1		1																																																																								4
CATTG	2																																																																											2
CATTT	31	3	3	1																																																																								38
CCAAA	3																																																																											3
CCAAT	1																																																																											1
CCACA	2																																																																											2
CCACG	3																																																																											3
CCACT	1																																																																											1
CCAGA	1																																																																											1
CCAGT	2																																																																											2
CCATA	5																																																																											5
CCATC	2																																																																											2
CCATG	1																																																																											1
CCATT	2	3																																																																										5
CCCAA	2																																																																											2
CCCAC	1																																																																											1
CCCAG	1																																																																											1
CCCCA	2																																																																											2
CCCCG	1																																																																											1
CCCCT	4																																																																											4
CCCGC	2																																																																											2
CCCGG	1																																																																											1
CCCTC	1																																																																											1
CCCTT	1																																																																											1
CCGCA	7	1																																																																										8
CCGCC	1																																																																											1
CCGCG	10																																																																											10
CCGTC	2																																																																											2
CCTAA	11	2	1	2	1		3	2		2	2	2																																																																28
CCTAC	3																																																																											3
CCTAT	3																																																																											3
CCTCA	1																																																																											1
CCTCG	3	1	1																																																																									5
CCTCT	1																																																																											1
CCTGA	1																																																																											1
CCTGG	1																																																																											1
CCTTA	1																																																																											1
CCTTC		1																																																																										1
CCTTG		1																																																																										1
CCTTT	6																																																																											6
CGAAA	2																																																																											2
CGAAC		1																																																																										1
CGAAG	1																																																																											1
CGAAT	1																																																																											1
CGACA	3																																																																											3
CGACG	13	3																																																																										16
CGAGA	1																																																																											1
CGAGG	2	1																																																																										3
CGATA	1																																																																											1
CGATG	2																																																																											2
CGATT	1																																																																											1
CGCAA	2																																																																											2
CGCAC	3																																																																											3
CGCAG	5																																																																											5
CGCAT	1																																																																											1
CGCCG	34	6	1																																																																									41
CGCCT		1																																																																										1
CGCGA	3																																																																											3
CGCGC	5																																																																											5
CGCGG	7		1																																																																									8
CGCGT	4																																																																											4
CGCTA	1																																																																											1
CGCTG	2																																																																											2
CGCTT	1																																																																											1
CGGAG	1																																																																											1
CGGCA					1																																																																							1
CGGCG	20	3																																																																										23
CGGGA	1																																																																											1
CGGTG	4																																																																											4
CGTAA	3																																																																											3
CGTAC	5																																																																											5
CGTAG	4																																																																											4
CGTCA	4																																																																											4
CGTCG	5	2																																																																										7
CGTGA	5																																																																											5
CGTGC	1																																																																											1
CGTGG	5					1																																																																						6
CGTGT	1																																																																											1
CGTTA	2																																																																											2
CGTTC	1																																																																											1
CGTTG	2																																																																											2
CGTTT	4																																																																											4
CTAAA	4																																																																											4
CTAAC	49	4	2	2	2	1	1			1	2	3	4																																																															71
CTAAT	2																																																																											2
CTACA	4																																																																											4
CTACT	4																																																																											4
CTAGA	1	1	1																																																																									3
CTAGC	2																																																																											2
CTAGG	3																																																																											3
CTAGT	1																																																																											1
CTATA	7																																																																											7
CTATC	1																																																																											1
CTATT	4																																																																											4
CTCAA	6																																																																											6
CTCAC	2																																																																											2
CTCAG	1																																																																											1
CTCAT	1																																																																											1
CTCCA	1																																																																											1
CTCCC	1																																																																											1
CTCCT	1	1																																																																										2
CTCGA	1																																																																											1
CTCGC	2																																																																											2
CTCTA	5																																																																											5
CTCTC	2																																																																											2
CTCTT	1																																																																											1
CTGAA	7																																																																											7
CTGAC	2																																																																											2
CTGAG	1																																																																											1
CTGAT	1																																																																											1
CTGCA	1																																																																											1
CTGCC	2																																																																											2
CTGCG	2																																																																											2
CTGCT	1																																																																											1
CTGGA	3																																																																											3
CTGGT	1	1																																																																										2
CTGTA	8	1																																																																										9
CTGTC	1																																																																											1
CTGTG	4																																																																											4
CTGTT	3																																																																											3
CTTAA	2																																																																											2
CTTAC	3																																																																											3
CTTAG	2																																																																											2
CTTAT	3																																																																											3
CTTCA	4																																																																											4
CTTCC	2																																																																											2
CTTCT	1																																																																											1
CTTGA	1																																																																											1
CTTGC	1																																																																											1
CTTGG	2																																																																											2
CTTGT	1																																																																											1
CTTTA	5																																																																											5
CTTTC	7																																																																											7
CTTTG	1																																																																											1
CTTTT	6																																																																											6
GAAAA	11																																																																											11
GAAAC	3																																																																											3
GAAAG	4																																																																											4
GAAAT	60	18	3	5	1		1																																																																					88
GAACA	4																																																																											4
GAACT	1																																																																											1
GAAGA	5																																																																											5
GAAGT	1																																																																											1
GAATA	11	2																																																																										13
GAATC	2																																																																											2
GAATG	4		1	1																																																																								6
GAATT	1	1																																																																										2
GACAA	1																																																																											1
GACAC	1																																																																											1
GACAG	2																																																																											2
GACAT	3																																																																											3
GACCC	1																																																																											1
GACCG	1																																																																											1
GACGA	1																																																																											1
GACGC	2																																																																											2
GACGT	5																																																																											5
GACTA	5																																																																											5
GACTC	1																																																																											1
GACTG	3																																																																											3
GACTT	2																																																																											2
GAGAG	3																																																																											3
GAGAT	2																																																																											2
GAGCA	2																																																																											2
GAGCT	1																																																																											1
GAGGC		2																																																																										2
GAGGG	3																																																																											3
GAGGT	1																																																																											1
GAGTA	2																																																																											2
GAGTC	1																																																																											1
GAGTG	1																																																																											1
GAGTT	3																																																																											3
GATAA	4	1																																																																										5
GATAC	1																																																																											1
GATAG	1																																																																											1
GATAT	2																																																																											2
GATCA	2																																																																											2
GATCT	1																																																																											1
GATGA	4																																																																											4
GATGG	1																																																																											1
GATGT	5																																																																											5
GATTA	1																																																																											1
GATTC	2																																																																											2
GATTT	10	1																																																																										11
GCAAA	1																																																																											1
GCAAC	1																																																																											1
GCAAG	1																																																																											1
GCAAT	3																																																																											3
GCACA	1																																																																											1
GCACG	1																																																																											1
GCACT	1																																																																											1
GCAGC	1																																																																											1
GCATA	1																																																																											1
GCATC	1																																																																											1
GCATG		1																																																																										1
GCATT	2																																																																											2
GCCAC	1																																																																											1
GCCCT	1																																																																											1
GCCGC	5																																																																											5
GCCTA	2																																																																											2
GCCTC	2																																																																											2
GCCTT	1																																																																											1
GCGAA	1																																																																											1
GCGAC	3																																																																											3
GCGAG	2																																																																											2
GCGCA	1																																																																											1
GCGCC	8	3																																																																										11
GCGCG	5	1																																																																										6
GCGCT	1																																																																											1
GCGGC	18	1																																																																										19
GCGGG	1																																																																											1
GCGGT	4			1							1																																																																	6
GCGTC	5	1																																																																										6
GCGTT	3																																																																											3
GCTAA	3																																																																											3
GCTAC	4																																																																											4
GCTAG	1	1																																																																										2
GCTAT	2																																																																											2
GCTCC	1																																																																											1
GCTGA	1																																																																											1
GCTGC	1																																																																											1
GCTGT	2																																																																											2
GCTTA	1																																																																											1
GCTTG	3																																																																											3
GCTTT	1																																																																											1
GGAAA	3																																																																											3
GGAAC	1																																																																											1
GGAAG	1																																																																											1
GGAAT	1		1					2																																																																				4
GGACG	1																																																																											1
GGACT	2																																																																											2
GGAGA	1																																																																											1
GGAGC	1																																																																											1
GGAGG	3																																																																											3
GGATA	2																																																																											2
GGCAG	1																																																																											1
GGCCA	1																																																																											1
GGCGA	2																																																																											2
GGCGC	3																																																																											3
GGCGG	1																																																																											1
GGCTA	3																																																																											3
GGGAA	1																																																																											1
GGGAC	1																																																																											1
GGGAT	1																																																																											1
GGGCG	1																																																																											1
GGGGA	3																																																																											3
GGGGT	1																																																																											1
GGGTT	1																																																																											1
GGTAA	3																																																																											3
GGTAC	1		1																																																																									2
GGTAG	1																																																																											1
GGTAT	4																																																																											4
GGTCA	2																																																																											2
GGTCG	1																																																																											1
GGTCT	3																																																																											3
GGTGA	3																																																																											3
GGTGC	1			1																																																																								2
GGTGG	2																																																																											2
GGTGT	3	1																																																																										4
GGTTA	22	4	4	2	2	6	6	7	11	6		1	9																																																															80
GGTTC	2																																																																											2
GGTTG	1																																																																											1
GTAAA	3																																																																											3
GTAAC	5																																																																											5
GTAAG	2	1																																																																										3
GTAAT	11																																																																											11
GTACA	6																																																																											6
GTACC	1																																																																											1
GTACG	4	1																																																																										5
GTACT	1																																																																											1
GTAGA	2																																																																											2
GTAGT	6	1																																																																										7
GTATA	3	1																																																																										4
GTATC	4																																																																											4
GTATG	3																																																																											3
GTATT	8	1																																																																										9
GTCAA	4																																																																											4
GTCAC	5																																																																											5
GTCAG	1																																																																											1
GTCAT	1																																																																											1
GTCCA	1																																																																											1
GTCCT	4																																																																											4
GTCGC	1	1																																																																										2
GTCGT	10	1																																																																										11
GTCTA	2	1																																																																										3
GTCTG	6	1																																																																										7
GTCTT	3																																																																											3
GTGAA	4	1																																																																										5
GTGAC	2																																																																											2
GTGAG	1																																																																											1
GTGAT	1																																																																											1
GTGCA	2																																																																											2
GTGCC	2																																																																											2
GTGCG	7																																																																											7
GTGGC	1																																																																											1
GTGGT	2																																																																											2
GTGTA	9	1	1																																																																									11
GTGTC	4																																																																											4
GTGTG	10																																																																											10
GTGTT	4																																																																											4
GTTAA	2																																																																											2
GTTAC	4																																																																											4
GTTAG	28	3		1	2	2	5	2	3	3	3	6																																																																58
GTTAT	3																																																																											3
GTTCA	3	1																																																																										4
GTTCG	1																																																																											1
GTTCT	3																																																																											3
GTTGA	5																																																																											5
GTTGC	7																																																																											7
GTTGG	3																																																																											3
GTTGT	6																																																																											6
GTTTA	5																																																																											5
GTTTC	3																																																																											3
GTTTT	17																																																																											17
TAAAA	169	8																																																																										177
TAAAC	13																																																																											13
TAAAG	6																																																																											6
TAAAT	71																																																																											71
TAACA	9	1																																																																										10
TAACC	28	1	2			2	2	2	2		5	2																																																																46
TAACG	3																																																																											3
TAACT	1																																																																											1
TAAGA	1																																																																											1
TAAGC	2																																																																											2
TAAGG	3																																																																											3
TAAGT	1																																																																											1
TAATA	30	1																																																																										31
TAATC	11																																																																											11
TAATG	17																																																																											17
TAATT	57	3																																																																										60
TACAA	21	1																																																																										22
TACAC	5																																																																											5
TACAG	2	3	1																																																																									6
TACAT	12																																																																											12
TACCA	4	2																																																																										6
TACCC		1																																																																										1
TACCG	2	1																																																																										3
TACCT	6	1																																																																										7
TACGA	6																																																																											6
TACGG	1	1																																																																										2
TACGT	5	1																																																																										6
TACTA	13																																																																											13
TACTC	1																																																																											1
TACTG	7	1																																																																										8
TACTT	8																																																																											8
TAGAA	14																																																																											14
TAGAC	2																																																																											2
TAGAG	4																																																																											4
TAGAT	7	1																																																																										8
TAGCA	4																																																																											4
TAGCG	1																																																																											1
TAGCT	3																																																																											3
TAGGA	4																																																																											4
TAGGC	1																																																																											1
TAGGG	4																																																																											4
TAGGT	18	2			3	1	1		2	1	1	4	1																																																															34
TAGTA	7	1																																																																										8
TAGTC	4	1	1																																																																									6
TAGTG	7																																																																											7
TAGTT	9																																																																											9
TATAA	21	1	1																																																																									23
TATAC	9	2																																																																										11
TATAG	10					1																																																																						11
TATAT	23																																																																											23
TATCA	6																																																																											6
TATCC	4	1																																																																										5
TATCG	4																																																																											4
TATCT	5	1																																																																										6
TATGA	3																																																																											3
TATGC	3																																																																											3
TATGG	4																																																																											4
TATGT	8	2	1																																																																									11
TATTA	58																																																																											58
TATTC	14	1																																																																										15
TATTG	24	2	2																																																																									28
TATTT	148	6								1																																																																		155
TCAAA	37	3																																																																										40
TCAAC	3																																																																											3
TCAAG	4																																																																											4
TCAAT	8	2																																																																										10
TCACA	10																																																																											10
TCACC	1																																																																											1
TCACG	4																																																																											4
TCACT	4																																																																											4
TCAGA	3																																																																											3
TCAGT	4	1																																																																										5
TCATA	6																																																																											6
TCATC	5																																																																											5
TCATG	6																																																																											6
TCATT	45	3	3	1		1					1		1																																																															55
TCCAA	3																																																																											3
TCCAG	2																																																																											2
TCCAT	1																																																																											1
TCCCA	2																																																																											2
TCCCC	2																																																																											2
TCCCG	1																																																																											1
TCCCT	1																																																																											1
TCCGC	1																																																																											1
TCCGG	1																																																																											1
TCCTA	3																																																																											3
TCCTC	1																																																																											1
TCCTT	1																																																																											1
TCGAA		1																																																																										1
TCGAC	1																																																																											1
TCGAG	1																																																																											1
TCGAT	1																																																																											1
TCGCA	2																																																																											2
TCGCG	4																																																																											4
TCGCT	1																																																																											1
TCGTA	4																																																																											4
TCGTC	1																																																																											1
TCGTG	7																																																																											7
TCGTT	1																																																																											1
TCTAA	10		1																																																																									11
TCTAC	2																																																																											2
TCTAG	5	1																																																																										6
TCTAT	5																																																																											5
TCTCA	3																																																																											3
TCTCC	4																																																																											4
TCTCT	1																																																																											1
TCTGA	4																																																																											4
TCTGG	3	1																																																																										4
TCTGT	4																																																																											4
TCTTA	5																																																																											5
TCTTC	5	1																																																																										6
TCTTG	4																																																																											4
TCTTT	10	2																																																																										12
TGAAA	175	74	26	16	2	2		2		1																																																																		298
TGAAC	1																																																																											1
TGAAG	3																																																																											3
TGAAT	10	3																																																																										13
TGACA	19	1																																																																										20
TGACC	4																																																																											4
TGACG	5	1																																																																										6
TGACT	3																																																																											3
TGAGC	1																																																																											1
TGAGG	1																																																																											1
TGAGT	2																																																																											2
TGATA	2																																																																											2
TGATG	4																																																																											4
TGATT	10	1	2																																																																									13
TGCAA	9																																																																											9
TGCAC	3																																																																											3
TGCAG	1					1																																																																						2
TGCAT	4																																																																											4
TGCCT	3																																																																											3
TGCGA	2																																																																											2
TGCGG	2	1											1																																																															4
TGCGT	2																																																																											2
TGCTA	2																																																																											2
TGCTG	2																																																																											2
TGCTT	1																																																																											1
TGGAA	10																																																																											10
TGGAC	1																																																																											1
TGGAG	3																																																																											3
TGGCA	2																																																																											2
TGGCC	1																																																																											1
TGGCT	1																																																																											1
TGGGC	1																																																																											1
TGGGT	1																																																																											1
TGGTA	2																																																																											2
TGGTC	1																																																																											1
TGGTG	2			1																																																																								3
TGGTT	2																																																																											2
TGTAA	20	2																																																																										22
TGTAC	7																																																																											7
TGTAG	8	1																																																																										9
TGTAT	17	2																																																																										19
TGTCA	20																																																																											20
TGTCC	1																																																																											1
TGTCG	6																																																																											6
TGTGA	12																																																																											12
TGTGG	3	1																																																																										4
TGTGT	7	1	1																																																																									9
TGTTA	7																																																																											7
TGTTC	2																																																																											2
TGTTG	10																																																																											10
TGTTT	15																																																																											15
TTAAA	69	4	1																																																																									74
TTAAC	1																																																																											1
TTAAG	1																																																																											1
TTAAT	67	3																																																																										70
TTACA	15																																																																											15
TTACC	5																																																																											5
TTACG	5		1																																																																									6
TTACT	7																																																																											7
TTAGA	9																																																																											9
TTAGC	5																																																																											5
TTAGG	22	1		2		3	3	2	5	2	3	8	4																																																															55
TTAGT	7	1																																																																										8
TTATA	21	3																																																																										24
TTATC	6																																																																											6
TTATG	8																																																																											8
TTATT	132	7			1																																																																							140
TTCAA	27	5		1																																																																								33
TTCAC	2	1																																																																										3
TTCAG	5																																																																											5
TTCAT	42	7	2				1			1																																																																		53
TTCCA	10																																																																											10
TTCCC	1																																																																											1
TTCCG	1																																																																											1
TTCCT	4																																																																											4
TTCGA	2																																																																											2
TTCGG	6																																																																											6
TTCGT	6																																																																											6
TTCTA	12	2																																																																										14
TTCTC	2																																																																											2
TTCTG	7																																																																											7
TTCTT	14	1																																																																										15
TTGAA	17	5	1																																																																									23
TTGAC	5																																																																											5
TTGAG	5																																																																											5
TTGAT	12	8																																																																										20
TTGCA	3																																																																											3
TTGCC	1																																																																											1
TTGCG	8																																																																											8
TTGCT	2	1																																																																										3
TTGGA	1																																																																											1
TTGGC	1																																																																											1
TTGGG	4																																																																											4
TTGGT	5																																																																											5
TTGTA	27									1																																																																		28
TTGTC	5																																																																											5
TTGTG	11																																																																											11
TTGTT	14																																																																											14
TTTAA	93	8			1																																																																							102
TTTAC	10	1																																																																										11
TTTAG	9																																																																											9
TTTAT	158	5		1		1																																																																						165
TTTCA	181	80	20	8	4	3	2		1																																																																			299
TTTCC	2																																																																											2
TTTCG	2																																																																											2
TTTCT	18	1					1																																																																					20
TTTGA	52	6	1																																																																									59
TTTGC	2																																																																											2
TTTGG	7																																																																											7
TTTGT	10																																																																											10
TTTTA	210	17	3																																																																									230
TTTTC	30																																																																											30
TTTTG	33																																																																											33
AAAAAG	2																																																																											2
AAAAAT	14																																																																											14
AAAACA	1																																																																											1
AAAACT	1																																																																											1
AAAAGT	3																																																																											3
AAAATA	10			1																																																																								11
AAAATC	3																																																																											3
AAAATG	2																																																																											2
AAAATT	8																																																																											8
AAACAA	1																																																																											1
AAACGG	2																																																																											2
AAACGT	1	1				2																																																																						4
AAACTG	1																																																																											1
AAAGAA	1																																																																											1
AAAGAT	1																																																																											1
AAAGTA	1																																																																											1
AAAGTG						1																																																																						1
AAATAA	8																																																																											8
AAATAC	1																																																																											1
AAATAT	3																																																																											3
AAATGA	9	1																																																																										10
AAATGG	1																																																																											1
AAATTA	5																																																																											5
AAATTC	20		1																																																																									21
AAATTT	4																																																																											4
AACAAT	2																																																																											2
AACAGC	14																																																																											14
AACCAT	1																																																																											1
AACCTA	1																																																																											1
AACGTA	6																																																																											6
AACGTC	2																																																																											2
AACTCT	1																																																																											1
AACTGA	1																																																																											1
AACTGT	1																																																																											1
AACTTA	1																																																																											1
AACTTT	2																																																																											2
AAGAAA	1																																																																											1
AAGATA	3	1																																																																										4
AAGATT	1																																																																											1
AAGCTT	1																																																																											1
AAGGAC	1																																																																											1
AAGGAG	2									1																																																																		3
AAGGCG	1																																																																											1
AAGTAG	1																																																																											1
AAGTAT	1																																																																											1
AAGTTC	1																																																																											1
AAGTTG	1																																																																											1
AATAAA	12																																																																											12
AATAAC	3																																																																											3
AATACA	1																																																																											1
AATAGA	1	1																																																																										2
AATAGG	1																																																																											1
AATAGT	1																																																																											1
AATATA	3	1																																																																										4
AATATC	2																																																																											2
AATATG	1																																																																											1
AATCAA	2																																																																											2
AATCAG	2																																																																											2
AATCAT	1																																																																											1
AATCCT	11	4																																																																										15
AATCGA	1																																																																											1
AATCGC	1																																																																											1
AATGAA	2		1																																																																									3
AATGAC	1																																																																											1
AATGAG	1																																																																											1
AATGCC	1																																																																											1
AATGGG	1																																																																											1
AATGTA										1																																																																		1
AATGTC	1																																																																											1
AATGTG	1																																																																											1
AATGTT	1																																																																											1
AATTAA	2																																																																											2
AATTAT	6																																																																											6
AATTCA	23	3	1																																																																									27
AATTGA	2																																																																											2
AATTTA	5																																																																											5
AATTTC	1																																																																											1
AATTTG	11																																																																											11
AATTTT	5																																																																											5
ACAAAA	6																																																																											6
ACAAAT	2																																																																											2
ACACAT	1																																																																											1
ACACCT	1																																																																											1
ACACGG	1																																																																											1
ACAGCA	1																																																																											1
ACATAC	2																																																																											2
ACATAT	1	1																																																																										2
ACATCT	1																																																																											1
ACATGT	1																																																																											1
ACATTG	1																																																																											1
ACATTT	3																																																																											3
ACCCAA	1																																																																											1
ACCCAT	1																																																																											1
ACCGAA	1																																																																											1
ACCGAC			1																																																																									1
ACCTTA	1																																																																											1
ACCTTT	1																																																																											1
ACGAAT	1	1																																																																										2
ACGAGT	1																																																																											1
ACGTAA	3		1																																																																									4
ACGTTT	8	4																																																																										12
ACTAAA	1																																																																											1
ACTATT	2																																																																											2
ACTCAC	1																																																																											1
ACTCTC	2																																																																											2
ACTGAA	1																																																																											1
ACTGAC	3																																																																											3
ACTGGC	1																																																																											1
ACTGTC	3																																																																											3
ACTGTT	1																																																																											1
ACTTTT	1																																																																											1
AGAAAA	3																																																																											3
AGAAAT	1																																																																											1
AGAAGG		1																																																																										1
AGAATC	3																																																																											3
AGAATT	2																																																																											2
AGACAT	1																																																																											1
AGAGGT	1																																																																											1
AGATAT	1																																																																											1
AGATTC	1																																																																											1
AGCAAC	3																																																																											3
AGCAAG	1																																																																											1
AGCAAT	1																																																																											1
AGCCGC	2																																																																											2
AGCGAC	1																																																																											1
AGCGGA	1																																																																											1
AGCTAG	1																																																																											1
AGCTTC	1																																																																											1
AGCTTT	1																																																																											1
AGGATA	1																																																																											1
AGGATT	2																																																																											2
AGGCAA	1																																																																											1
AGGTAA	1																																																																											1
AGGTTT	2																																																																											2
AGTAAG	1																																																																											1
AGTAGA	1																																																																											1
AGTCTA	1																																																																											1
AGTGAC	1																																																																											1
AGTGGT	1																																																																											1
AGTTCT	1																																																																											1
AGTTTC	1																																																																											1
ATAAAA	6	1																																																																										7
ATAAAC	1																																																																											1
ATAAAG	2																																																																											2
ATAAAT	1																																																																											1
ATAACA	1																																																																											1
ATAACG	1																																																																											1
ATAAGA	3																																																																											3
ATAAGG	1																																																																											1
ATAATC	2																																																																											2
ATAATG	1		1																																																																									2
ATAATT	3																																																																											3
ATACAT	1																																																																											1
ATACCT	1																																																																											1
ATACTA	2																																																																											2
ATAGGC	1																																																																											1
ATAGGT	2																																																																											2
ATAGTG	1																																																																											1
ATATAA		1																																																																										1
ATATAC	1	2																																																																										3
ATATAG	2																																																																											2
ATATGA	1																																																																											1
ATATGT	2																																																																											2
ATATTA	1																																																																											1
ATCAAA	2	1																																																																										3
ATCATA	1																																																																											1
ATCATG		1																																																																										1
ATCCAT	1																																																																											1
ATCCGT	1																																																																											1
ATCCTA	33	12	8		1																																																																							54
ATCCTG	1	1																																																																										2
ATCCTT	1																																																																											1
ATCGAT	1																																																																											1
ATCGTT	1																																																																											1
ATCTAC	27	1																																																																										28
ATCTCT	1																																																																											1
ATCTGT	1																																																																											1
ATCTTC	1																																																																											1
ATCTTG	1																																																																											1
ATGAAA	4																																																																											4
ATGAAG	1																																																																											1
ATGACG	1																																																																											1
ATGATA						1																																																																						1
ATGATC	1																																																																											1
ATGATT	2																																																																											2
ATGCAA	1																																																																											1
ATGCAC	1																																																																											1
ATGCAT	1																																																																											1
ATGCTA	1																																																																											1
ATGGAA	1																																																																											1
ATGGAG	1																																																																											1
ATGGCA	1																																																																											1
ATGTAA	1																																																																											1
ATGTAG	3																																																																											3
ATGTAT	3																																																																											3
ATGTCA	2																																																																											2
ATTAAA	3																																																																											3
ATTAAC	1																																																																											1
ATTAAT	2																																																																											2
ATTACT	1																																																																											1
ATTAGG	45	6	4																																																																									55
ATTATA	6	1																																																																										7
ATTATC	1																																																																											1
ATTCAA	18	4																																																																										22
ATTCAT	1	1																																																																										2
ATTCGC	5	11																																																																										16
ATTCTA	1																																																																											1
ATTGAA	2																																																																											2
ATTGAC	3																																																																											3
ATTGCC	1																																																																											1
ATTGGC	1																																																																											1
ATTTAA	3																																																																											3
ATTTAC	6		1																																																																									7
ATTTAT	3																																																																											3
ATTTCA	3																																																																											3
ATTTCT	4																																																																											4
ATTTGA	11	1																																																																										12
ATTTGT	1																																																																											1
ATTTTA	4																																																																											4
ATTTTC	6	1	1																																																																									8
ATTTTG	2																																																																											2
ATTTTT	25																																																																											25
CAAAAA	1																																																																											1
CAAAAC	1																																																																											1
CAAAAT	1																																																																											1
CAAAGT	1																																																																											1
CAAATA	1																																																																											1
CAAATT	10																																																																											10
CAACCG	1																																																																											1
CAACGG	1																																																																											1
CAAGTA	1																																																																											1
CAATAA	3																																																																											3
CAATAT	1																																																																											1
CAATGT	1																																																																											1
CACACC	1																																																																											1
CACACG	1																																																																											1
CACCAT	1																																																																											1
CACCGG	1																																																																											1
CACTCG	1																																																																											1
CAGAAG	1																																																																											1
CAGAAT	1																																																																											1
CAGAGG	1																																																																											1
CAGCAA	1																																																																											1
CAGCAT	1																																																																											1
CAGCGA	1																																																																											1
CAGCGG	1																																																																											1
CAGGAC	1																																																																											1
CAGGTG	1																																																																											1
CAGTAC	1																																																																											1
CAGTTA	1																																																																											1
CATAAG	1																																																																											1
CATAGT	1																																																																											1
CATATA	2																																																																											2
CATCTA	1																																																																											1
CATCTC		1																																																																										1
CATGCA	1																																																																											1
CATGTG	1																																																																											1
CATGTT	1																																																																											1
CATTCG	1	2																																																																										3
CATTTA	2																																																																											2
CATTTG	1																																																																											1
CATTTT	1																																																																											1
CCAACA	1																																																																											1
CCAAGA	1																																																																											1
CCAAGT	1																																																																											1
CCAATG	1																																																																											1
CCACCG	2																																																																											2
CCACTA	1																																																																											1
CCAGAA	1																																																																											1
CCAGAT	1																																																																											1
CCATCA	1																																																																											1
CCATTT	1																																																																											1
CCCACG	1																																																																											1
CCCCCT	2																																																																											2
CCCCGG	1																																																																											1
CCCCTC	1																																																																											1
CCCGCA	1	1																																																																										2
CCCGCC	1																																																																											1
CCCGCG	1	1																																																																										2
CCCTCC	1																																																																											1
CCGAAA	2																																																																											2
CCGCCT	1			1																																																																								2
CCGCGA	1																																																																											1
CCGCGC	2																																																																											2
CCGCGT		1																																																																										1
CCGCTC	1																																																																											1
CCGGCG	1																																																																											1
CCGGGA	3																																																																											3
CCGGGC	1																																																																											1
CCGGGG	2																																																																											2
CCGGTG	1																																																																											1
CCGTAA	2																																																																											2
CCGTCA	1																																																																											1
CCGTCG	1	1																																																																										2
CCGTTA	1																																																																											1
CCTACT	1																																																																											1
CCTAGC	1																																																																											1
CCTTAT		1																																																																										1
CCTTTA	1																																																																											1
CGAATA	3																																																																											3
CGATCG	1																																																																											1
CGATTT	1																																																																											1
CGCACA	3																																																																											3
CGCAGC	1																																																																											1
CGCAGG	1																																																																											1
CGCCCA	4																																																																											4
CGCCGG	1																																																																											1
CGCCTG	1																																																																											1
CGCGAC	2		1																																																																									3
CGCGCC	1																																																																											1
CGCGTG	1																																																																											1
CGCTAC	1																																																																											1
CGCTGG	1																																																																											1
CGGAAG	1																																																																											1
CGGATA	1																																																																											1
CGGCAA	1																																																																											1
CGGCTG	1																																																																											1
CGGGCC	1																																																																											1
CGGGCG	2																																																																											2
CGGGGC	1																																																																											1
CGGGGG	1																																																																											1
CGGTAG	1																																																																											1
CGGTCA	1																																																																											1
CGGTGT	1																																																																											1
CGTAAA	1		2			1																																																																						4
CGTAGC	1																																																																											1
CGTAGG	1																																																																											1
CGTCGC	1																																																																											1
CGTGAC	2																																																																											2
CGTGGT	1																																																																											1
CGTTAT	1																																																																											1
CGTTTA	1	2	1				1																																																																					5
CTAAAG	1																																																																											1
CTAATA	1																																																																											1
CTAATC	3																																																																											3
CTACAT	1																																																																											1
CTAGAA		1																																																																										1
CTATCT		1																																																																										1
CTATTG	1																																																																											1
CTCAAA	1																																																																											1
CTCACA	1																																																																											1
CTCACC	2																																																																											2
CTCACT		1																																																																										1
CTCAGA	1																																																																											1
CTCCCA	1																																																																											1
CTCCCC	1																																																																											1
CTCCGC		1																																																																										1
CTCTTC	1																																																																											1
CTGAAA	1																																																																											1
CTGAGA	1																																																																											1
CTGCCG	1																																																																											1
CTGCCT	1																																																																											1
CTGCGA	1																																																																											1
CTGCTA	1																																																																											1
CTGGAG	1																																																																											1
CTGGTC	1																																																																											1
CTGTCA	3																																																																											3
CTTAAA	1																																																																											1
CTTATA	2																																																																											2
CTTATT	2																																																																											2
CTTCCG	1																																																																											1
CTTCGC	1																																																																											1
CTTGTC	1																																																																											1
CTTTAC	5																																																																											5
CTTTGT	1																																																																											1
CTTTTC	1																																																																											1
GAAAAT	3	1																																																																										4
GAAACA	1																																																																											1
GAAAGT	1																																																																											1
GAAATG	2																																																																											2
GAAGTT	1																																																																											1
GAATAC	2																																																																											2
GAATAT	4																																																																											4
GAATCA	1																																																																											1
GAATTT	4																																																																											4
GACAGT	1																																																																											1
GACCCG	1																																																																											1
GACCGG	1																																																																											1
GACCGT			1																																																																									1
GACCTG	1																																																																											1
GACGCG	1																																																																											1
GACTAA	1																																																																											1
GACTAT	1																																																																											1
GACTCA	1																																																																											1
GAGAAG	1																																																																											1
GAGAGG	1																																																																											1
GAGCTA	1																																																																											1
GAGGCG	1																																																																											1
GAGGGC		1																																																																										1
GAGTAG	1																																																																											1
GAGTGG	1																																																																											1
GATAAA	2																																																																											2
GATATA	1																																																																											1
GATCTA	1																																																																											1
GATGAA	1																																																																											1
GATGAC	2	1																																																																										3
GATGCG	1																																																																											1
GATGTG	2																																																																											2
GATTAG	2																																																																											2
GATTAT	1																																																																											1
GATTCT	2																																																																											2
GATTGC	1																																																																											1
GATTTA	1																																																																											1
GATTTG	1																																																																											1
GATTTT	1																																																																											1
GCAACA	1																																																																											1
GCAAGG	1																																																																											1
GCAATG	1																																																																											1
GCACCA	1																																																																											1
GCAGGA	1																																																																											1
GCATAT	1																																																																											1
GCATGA	1																																																																											1
GCCAGC	1																																																																											1
GCCCCA	1																																																																											1
GCCCCG	1																																																																											1
GCCCTT	1																																																																											1
GCCGAC	1	2																																																																										3
GCCGCA	4																																																																											4
GCCGGA	1																																																																											1
GCCTCC	1		1																																																																									2
GCCTGC	1	2																																																																										3
GCGAAT	7	10																																																																										17
GCGAGG	1																																																																											1
GCGCAC	1																																																																											1
GCGCCC	2																																																																											2
GCGCGT	2																																																																											2
GCGGAG		1																																																																										1
GCGGCT	1																																																																											1
GCGGGA	1																																																																											1
GCGGGC	2																																																																											2
GCGGGG	1																																																																											1
GCGGGT	1																																																																											1
GCGGTG		1																																																																										1
GCGTCG	1																																																																											1
GCGTCT	1																																																																											1
GCGTGG	1																																																																											1
GCGTGT	1																																																																											1
GCTACG	1																																																																											1
GCTGCG	1																																																																											1
GCTGGT					1																																																																							1
GCTGTT	2																																																																											2
GCTTAC	1																																																																											1
GCTTGA	1																																																																											1
GCTTGC	1																																																																											1
GGAAAT	1																																																																											1
GGAACT	1																																																																											1
GGACCG	1																																																																											1
GGAGGG		1																																																																										1
GGAGTG	1	1																																																																										2
GGATCT	1																																																																											1
GGATTA	1																																																																											1
GGCAGT	1																																																																											1
GGCGAG	1	1																																																																										2
GGCGCA	2	1																																																																										3
GGCGCG	1																																																																											1
GGCGGA	3																																																																											3
GGCGGT	3	1																																																																										4
GGCGTG	1	2																																																																										3
GGCTGC	2																																																																											2
GGCTGG	1																																																																											1
GGCTTA	1																																																																											1
GGGAGT	1	1																																																																										2
GGGCGT	1																																																																											1
GGGGCG		1																																																																										1
GGGGGA	1																																																																											1
GGGGGT	2																																																																											2
GGGTGC	1																																																																											1
GGTAAA	1																																																																											1
GGTACA	1																																																																											1
GGTCAC	1																																																																											1
GGTCCC	1	1																																																																										2
GGTGAT	1																																																																											1
GGTGCG	2																																																																											2
GGTGCT	1																																																																											1
GGTGGC	1																																																																											1
GGTGTG	1																																																																											1
GGTTCT	1																																																																											1
GGTTGT	1																																																																											1
GGTTTT	1																																																																											1
GTAAAA	1																																																																											1
GTAAAC	14	8	3	3			1				1																																																																	30
GTAAAT	4	2	1		1	1			1																																																																			10
GTAACC	1																																																																											1
GTACAT	1																																																																											1
GTAGAT	2																																																																											2
GTAGTT	1																																																																											1
GTATCA	1																																																																											1
GTATGA	1																																																																											1
GTATTC	3																																																																											3
GTCAAA	1																																																																											1
GTCATC	2																																																																											2
GTCCCG	1																																																																											1
GTCCGA	1																																																																											1
GTCGCG	1																																																																											1
GTCGGC	1																																																																											1
GTCGGT	1																																																																											1
GTCTCA	1																																																																											1
GTCTGT	1																																																																											1
GTCTTG	1																																																																											1
GTGACC	1																																																																											1
GTGCGC	2																																																																											2
GTGCGG	2		1																																																																									3
GTGGCG		1																																																																										1
GTGGGC	3	2																																																																										5
GTGTCA	1																																																																											1
GTGTGA	1																																																																											1
GTGTGC	2	2																																																																										4
GTTAAA	1																																																																											1
GTTAAC	1																																																																											1
GTTACG	1																																																																											1
GTTCAC	1																																																																											1
GTTCGG	1																																																																											1
GTTCTG	1																																																																											1
GTTGCA	1																																																																											1
GTTGCT	1																																																																											1
GTTGGT	1																																																																											1
GTTGTG	1																																																																											1
GTTTAC	11	2	1	2	2																																																																							18
GTTTAT	1																																																																											1
GTTTCA	1																																																																											1
GTTTCG	2																																																																											2
GTTTTT	1																																																																											1
TAAAAA	9																																																																											9
TAAAAG	1																																																																											1
TAAAAT	2																																																																											2
TAAACC	1																																																																											1
TAAACG	8	1	1	1																																																																								11
TAAACT	1																																																																											1
TAAAGA	2																																																																											2
TAAATA	2																																																																											2
TAAATG	4																																																																											4
TAAATT	6																																																																											6
TAACAG	1																																																																											1
TAACGT	1																																																																											1
TAACTA	1																																																																											1
TAACTT	1																																																																											1
TAAGGA	1																																																																											1
TAAGGC	1																																																																											1
TAAGTA	1																																																																											1
TAATAT	2																																																																											2
TAATCC	11	2	1																																																																									14
TAATGA	2																																																																											2
TAATTA	6																																																																											6
TAATTC	1																																																																											1
TAATTT	2																																																																											2
TACACA		1																																																																										1
TACACG	1																																																																											1
TACAGG	1																																																																											1
TACATA	2		1																																																																									3
TACATC	2																																																																											2
TACATG	3																																																																											3
TACATT	2	2																																																																										4
TACCAG	1	1																																																																										2
TACCTA	5																																																																											5
TACGAT	1																																																																											1
TACGGA	2	1																																																																										3
TACGTT	1	3	1																																																																									5
TACTTG	1																																																																											1
TACTTT	1																																																																											1
TAGAAA	2																																																																											2
TAGAAT	1																																																																											1
TAGATG	3																																																																											3
TAGATT	1																																																																											1
TAGGAT	15	5	1		1																																																																							22
TAGGCA		1																																																																										1
TAGGCC	1																																																																											1
TAGGTA	4																																																																											4
TAGTGT		1																																																																										1
TATAAA	4	1																																																																										5
TATAAG	1																																																																											1
TATAAT	1																																																																											1
TATACA	1																																																																											1
TATACC	1																																																																											1
TATACT	1																																																																											1
TATATC	1																																																																											1
TATATG	2																																																																											2
TATATT	1																																																																											1
TATCAT	2	1																																																																										3
TATCCG	3																																																																											3
TATCTA	1																																																																											1
TATCTC	1																																																																											1
TATCTT	1																																																																											1
TATGAA	2																																																																											2
TATGAC	1																																																																											1
TATGGA	1																																																																											1
TATGTA	3																																																																											3
TATGTC	1																																																																											1
TATTAG	1																																																																											1
TATTCA	1																																																																											1
TATTCG	4																																																																											4
TATTGT	1																																																																											1
TATTTA	4																																																																											4
TATTTG	2																																																																											2
TATTTT	9																																																																											9
TCAAAC	1																																																																											1
TCAAAT	4																																																																											4
TCACTA	1																																																																											1
TCAGAA	2																																																																											2
TCATAA	1	1																																																																										2
TCATAC	1																																																																											1
TCATCG	1																																																																											1
TCATCT	1																																																																											1
TCATGC	1																																																																											1
TCATTT	1	1																																																																										2
TCCCAC	1																																																																											1
TCCCCT	1																																																																											1
TCCCTG	2																																																																											2
TCCGAC	1																																																																											1
TCCGCT	1																																																																											1
TCCGGC	1																																																																											1
TCCTAA	4																																																																											4
TCCTTA	1																																																																											1
TCGAAT	1																																																																											1
TCGATA	1																																																																											1
TCGGTT	1																																																																											1
TCGTAT	1																																																																											1
TCTACA	9																																																																											9
TCTATT	1																																																																											1
TCTGAA	1																																																																											1
TCTGAT	1																																																																											1
TCTGGA	1																																																																											1
TCTTAT	1																																																																											1
TCTTGA	1																																																																											1
TCTTTA	1																																																																											1
TGAAAA	5	1																																																																										6
TGAAAG	1																																																																											1
TGAATT	2																																																																											2
TGACAA	4																																																																											4
TGACAG	1																																																																											1
TGACAT	1																																																																											1
TGAGAG		1																																																																										1
TGAGCT	1																																																																											1
TGATTC	1																																																																											1
TGATTT	2																																																																											2
TGCATA	1																																																																											1
TGCATT	1																																																																											1
TGCCAC	1																																																																											1
TGCCCA	4																																																																											4
TGCCTC	1																																																																											1
TGCCTT	1																																																																											1
TGCGAA	1	2																																																																										3
TGCGCG	1																																																																											1
TGCGGC	3																																																																											3
TGCTGG	1	1																																																																										2
TGCTTA		1																																																																										1
TGCTTC	1																																																																											1
TGCTTG	1																																																																											1
TGGAAA	1																																																																											1
TGGAAC		1																																																																										1
TGGACA	2																																																																											2
TGGAGA	1																																																																											1
TGGCAA		1																																																																										1
TGGCGC	1																																																																											1
TGGGCA	1																																																																											1
TGGGCG	5																																																																											5
TGGTCA	1																																																																											1
TGGTCT	1																																																																											1
TGGTGT	1																																																																											1
TGGTTG	1	1																																																																										2
TGTAAA	4																																																																											4
TGTACG	1																																																																											1
TGTACT	1																																																																											1
TGTAGA	35	3																																																																										38
TGTAGG	1																																																																											1
TGTATC	3																																																																											3
TGTATG	1																																																																											1
TGTATT	1																																																																											1
TGTCAA	4																																																																											4
TGTCAC	1																																																																											1
TGTCAG	2																																																																											2
TGTCAT	1																																																																											1
TGTCCT	1																																																																											1
TGTGAT	1																																																																											1
TGTGGT	1																																																																											1
TGTGTA	1																																																																											1
TGTGTT	1																																																																											1
TGTTAA	1																																																																											1
TGTTGA	1																																																																											1
TGTTGG	2																																																																											2
TGTTTG		1																																																																										1
TGTTTT	1																																																																											1
TTAAAA	2																																																																											2
TTAAAT	2																																																																											2
TTAAGA	1																																																																											1
TTAATA	5																																																																											5
TTAATT	5																																																																											5
TTACAA			1																																																																									1
TTACAC	1																																																																											1
TTACAT	4																																																																											4
TTACCT		1																																																																										1
TTACGT	19	4	2			1		1																																																																				27
TTACTT	2																																																																											2
TTAGGA	1		1																																																																									2
TTAGTT	2																																																																											2
TTATAA	4																																																																											4
TTATAG	1																																																																											1
TTATAT	2																																																																											2
TTATCC	1																																																																											1
TTATTT	6																																																																											6
TTCAAA	19	2																																																																										21
TTCAAT	1																																																																											1
TTCACC		1																																																																										1
TTCACG	1																																																																											1
TTCCAT	9																																																																											9
TTCGAT	2																																																																											2
TTCGCA	1																																																																											1
TTCGGT	2																																																																											2
TTCGTA		1																																																																										1
TTCTAG	2																																																																											2
TTCTAT	1																																																																											1
TTCTCT	1																																																																											1
TTCTTT	1																																																																											1
TTGAAA	1																																																																											1
TTGAAG	1																																																																											1
TTGAAT	4																																																																											4
TTGACA	7																																																																											7
TTGACG	1																																																																											1
TTGATA	1																																																																											1
TTGATT	1																																																																											1
TTGCAA	1	1																																																																										2
TTGCTG	19																																																																											19
TTGGAA	1	1																																																																										2
TTGGGT	1																																																																											1
TTGGTA	1																																																																											1
TTGTAT		1																																																																										1
TTGTCA	1																																																																											1
TTGTGG	1																																																																											1
TTGTTA	1																																																																											1
TTTAAA	2																																																																											2
TTTAAC	1																																																																											1
TTTAAT	5	1																																																																										6
TTTACA	15	3	1		2																																																																							21
TTTACC	2																																																																											2
TTTACG	25	10	7	5		3	1			1																																																																		52
TTTAGA	1																																																																											1
TTTAGC	1																																																																											1
TTTATA	1																																																																											1
TTTATC	1		1																																																																									2
TTTATT	4																																																																											4
TTTCAA		1																																																																										1
TTTCAG	1																																																																											1
TTTCAT	3																																																																											3
TTTCGG	1																																																																											1
TTTCTT	1																																																																											1
TTTGAA	94	16																																																																										110
TTTGAC		1																																																																										1
TTTGAG	1																																																																											1
TTTGAT	3																																																																											3
TTTGCT	1																																																																											1
TTTGGT	1																																																																											1
TTTGTA	1																																																																											1
TTTGTG	2																																																																											2
TTTGTT	1																																																																											1
TTTTAA	8																																																																											8
TTTTAC	1																																																																											1
TTTTAT	9																																																																											9
TTTTCA	8																																																																											8
TTTTCT	3																																																																											3
TTTTGA	1																																																																											1
TTTTGT	2																																																																											2
TTTTTA	13																																																																											13
TTTTTC	7																																																																											7

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	54	42	34	25	14	11	15	10	14	7	4	6	3	5	5	2	3	5	1		2		1	2	1	2		2	1	4	5		2	2	1	1					1	1		1	1		1	1		1			1	1	1	3	4	4	307
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	23	27	28	20	23	16	21	9	24	13	11	17	12	9	14	8	5	4	2	2	3	3	6	4	2	4	1	1	1	3	2	1	1	2			1	2		1									2				1						329
AC/GT	-	-	-	822	347	243	160	103	69	39	24	25	27	7	10	8	7	4	3	4	1	7	1	6	2	4		1	2	1	2		1			2							1																																	1933
AG/CT	-	-	-	379	204	120	68	38	31	16	13	14	8	2	2	3	1	2	1	1	1	3	2	2			1		1		1					1																																								915
AT/AT	-	-	-	623	217	117	68	49	30	16	12	12	9	2	1	2	1						1																																																					1160
CG/CG	-	-	-	37	2		1	1																																																																				41
AAC/GTT	-	-	68	33	9	1	2																																																																					113
AAG/CTT	-	-	85	34	13	5	4	4	2	1	3	1	5		2	1	3	1	4	2	2	2	7	1																																																				182
AAT/ATT	-	-	1754	429	109	41	15	9	1	1			1																																																															2360
ACC/GGT	-	-	43	14	5	5	1	1	1																																																																			70
ACG/CGT	-	-	12	3																																																																								15
ACT/AGT	-	-	80	20	5	2	1																																																																					108
AGC/CTG	-	-	18	3	2	1		1							1																																																													26
AGG/CCT	-	-	13	4	2																																																																							19
ATC/ATG	-	-	478	101	33	10	6	1					1																																																															630
CCG/CGG	-	-	134	57	22	12	2	6																																																																				233
AAAC/GTTT	-	489	154	61	32	10	8	12	14	4	4	4	3	2	1	2	2		1																																																									803
AAAG/CTTT	-	104	17	9	2	2	1	1		1						1																																																												138
AAAT/ATTT	-	2376	502	138	59	14	16	3	5	1	1		1		3																																																													3119
AACC/GGTT	-	9	6																																																																									15
AACG/CGTT	-	22	6																																																																									28
AACT/AGTT	-	17	1									1	1			1		1																																																										22
AAGC/CTTG	-	13																																																																										13
AAGG/CCTT	-	17	2	2	1																																																																							22
AAGT/ACTT	-	38	7					1																																																																				46
AATC/ATTG	-	49	9	2	1		1																																																																					62
AATG/ATTC	-	161	52	24	14	7	5	3	3	1							1																																																											271
AATT/AATT	-	159	18	1			1																																																																					179
ACAG/CTGT	-	664	326	116	41	19	16	13	8	5	2	4	1	3	4	1	3			1																																																								1227
ACAT/ATGT	-	479	89	28	14	7	5	5	3	2	2	1		1	2																																																													638
ACCG/CGGT	-	5	2		1																																																																							8
ACCT/AGGT	-	331	35	5	1	2																																																																						374
ACGC/CGTG	-	16	2	1	3	1						1																																																																24
ACGG/CCGT	-	19	4	2																																																																								25
ACGT/ACGT	-	9	3	1																																																																								13
ACTC/AGTG	-	31	9	4	3	1					1																																																																	49
ACTG/AGTC	-	18	5																																																																									23
AGAT/ATCT	-	138	35	7	2	2	2		2	1		1																																																																190
AGCC/CTGG	-	5		1																																																																								6
AGCG/CGCT	-	23	1																																																																									24
AGCT/AGCT	-	10																																																																										10
AGGC/CCTG	-	10	2		1																																																																							13
AGGG/CCCT	-	2																																																																										2
ATCC/ATGG	-	303	104	25	8	1	1																																																																					442
ATCG/ATCG	-	4	1																																																																									5
ATGC/ATGC	-	6	1																																																																									7
CCCG/CGGG	-	3																																																																										3
AAAAC/GTTTT	166	6																																																																										172
AAAAG/CTTTT	125	8					1																																																																					134
AAAAT/ATTTT	1526	78	8	2	1	1				1																																																																		1617
AAACC/GGTTT	29																																																																											29
AAACG/CGTTT	30	1																																																																										31
AAACT/AGTTT	86	2																																																																										88
AAAGC/CTTTG	19	1																																																																										20
AAAGG/CCTTT	31																																																																											31
AAAGT/ACTTT	56	2																																																																										58
AAATC/ATTTG	214	31	6																																																																									251
AAATG/ATTTC	1133	359	120	52	20	14	8	5	2	4	1		3																																																															1721
AAATT/AATTT	807	39	2		1																																																																							849
AACAC/GTGTT	77	2	1																																																																									80
AACAG/CTGTT	35	1																																																																										36
AACAT/ATGTT	69	3	1																																																																									73
AACCC/GGGTT	13																																																																											13
AACCG/CGGTT	9	2																																																																										11
AACCT/AGGTT	231	27	18	15	13	17	28	17	28	18	19	30	24																																																															485
AACGC/CGTTG	33																																																																											33
AACGG/CCGTT	4																																																																											4
AACGT/ACGTT	33	2	1																																																																									36
AACTC/AGTTG	27	1																																																																										28
AACTG/AGTTC	40	2																																																																										42
AACTT/AAGTT	17																																																																											17
AAGAC/CTTGT	20	1																																																																										21
AAGAG/CTCTT	27	1																																																																										28
AAGAT/ATCTT	42	3																																																																										45
AAGCC/CTTGG	8																																																																											8
AAGCG/CGCTT	5																																																																											5
AAGCT/AGCTT	24	1																																																																										25
AAGGC/CCTTG	16	1																																																																										17
AAGGG/CCCTT	8	1																																																																										9
AAGGT/ACCTT	37	2																																																																										39
AAGTC/ACTTG	24																																																																											24
AAGTG/ACTTC	34	3																																																																										37
AATAC/ATTGT	168	10	4							1																																																																		183
AATAG/ATTCT	95	5																																																																										100
AATAT/ATATT	320	12	1																																																																									333
AATCC/ATTGG	16		1																																																																									17
AATCG/ATTCG	19	3																																																																										22
AATCT/AGATT	60	3	1																																																																									64
AATGC/ATTGC	36																																																																											36
AATGG/ATTCC	48	6	2	2				2																																																																				60
AATGT/ACATT	137	9	1	1																																																																								148
AATTC/AATTG	135	26	2	2																																																																								165
ACACC/GGTGT	36	5	2	1																																																																								44
ACACG/CGTGT	46	1																																																																										47
ACACT/AGTGT	57	4	2																																																																									63
ACAGC/CTGTG	14																																																																											14
ACAGG/CCTGT	12																																																																											12
ACAGT/ACTGT	43	6	1																																																																									50
ACATC/ATGTG	58																																																																											58
ACATG/ATGTC	107	3																																																																										110
ACCAG/CTGGT	20	3																																																																										23
ACCAT/ATGGT	41	2																																																																										43
ACCCC/GGGGT	8																																																																											8
ACCCG/CGGGT	2	1																																																																										3
ACCCT/AGGGT	11	1																																																																										12
ACCGC/CGGTG	31	2		2							1		1																																																															37
ACCGG/CCGGT	4																																																																											4
ACCGT/ACGGT	16	4	1																																																																									21
ACCTC/AGGTG	12	1	1																																																																									14
ACCTG/AGGTC	14																																																																											14
ACGAG/CGTCT	4																																																																											4
ACGAT/ATCGT	28	1																																																																										29
ACGCC/CGTGG	13		1			1																																																																						15
ACGCG/CGCGT	41	8																																																																										49
ACGCT/AGCGT	12																																																																											12
ACGGC/CCGTG	4				1																																																																							5
ACGGG/CCCGT	6																																																																											6
ACGTC/ACGTG	40	1																																																																										41
ACTAG/AGTCT	38	4	2																																																																									44
ACTAT/AGTAT	66	5				1																																																																						72
ACTCC/AGTGG	8																																																																											8
ACTCG/AGTCG	7	1																																																																										8
ACTCT/AGAGT	32	1																																																																										33
ACTGC/AGTGC	17					1																																																																						18
ACTGG/AGTCC	14	1																																																																										15
AGAGC/CTCTG	7																																																																											7
AGAGG/CCTCT	15	1																																																																										16
AGATC/ATCTG	14	1																																																																										15
AGATG/ATCTC	19																																																																											19
AGCAT/ATGCT	26																																																																											26
AGCCC/CTGGG	2																																																																											2
AGCCG/CGGCT	1																																																																											1
AGCCT/AGGCT	13	1																																																																										14
AGCGC/CGCTG	13																																																																											13
AGCGG/CCGCT	5																																																																											5
AGCTC/AGCTG	7																																																																											7
AGGAT/ATCCT	33	3				1																																																																						37
AGGCC/CCTGG	3																																																																											3
AGGCG/CCTCG	13	5	1																																																																									19
AGGGC/CCCTG	4																																																																											4
AGGGG/CCCCT	20																																																																											20
ATATC/ATATG	34																																																																											34
ATCCC/ATGGG	7																																																																											7
ATCCG/ATCGG	4																																																																											4
ATCGC/ATGCG	10																																																																											10
ATGCC/ATGGC	7	1																																																																										8
CCCCG/CGGGG	7																																																																											7
CCCGG/CCGGG	1																																																																											1
CCGCG/CGCGG	115	14	2																																																																									131
AAAAAC/GTTTTT	14																																																																											14
AAAAAG/CTTTTT	19																																																																											19
AAAAAT/ATTTTT	125	1		1																																																																								127
AAAACC/GGTTTT	3																																																																											3
AAAACT/AGTTTT	4																																																																											4
AAAAGC/CTTTTG	1																																																																											1
AAAAGG/CCTTTT	1																																																																											1
AAAAGT/ACTTTT	11																																																																											11
AAAATC/ATTTTG	18	1																																																																										19
AAAATG/ATTTTC	44	5	2																																																																									51
AAAATT/AATTTT	51	1																																																																										52
AAACAC/GTGTTT	3	1																																																																										4
AAACAG/CTGTTT	1																																																																											1
AAACAT/ATGTTT	2																																																																											2
AAACCC/GGGTTT	2																																																																											2
AAACCG/CGGTTT	9																																																																											9
AAACCT/AGGTTT	4																																																																											4
AAACGG/CCGTTT	2																																																																											2
AAACGT/ACGTTT	98	35	19	11	2	7	3	1		1	1																																																																	178
AAACTC/AGTTTG	3																																																																											3
AAACTG/AGTTTC	7																																																																											7
AAACTT/AAGTTT	3																																																																											3
AAAGAC/CTTTGT	1																																																																											1
AAAGAG/CTCTTT	1																																																																											1
AAAGAT/ATCTTT	13	1	1																																																																									15
AAAGCT/AGCTTT	3																																																																											3
AAAGGC/CCTTTG	2																																																																											2
AAAGGT/ACCTTT	11	1																																																																										12
AAAGTC/ACTTTG	2	1																																																																										3
AAAGTG/ACTTTC	2					1																																																																						3
AAAGTT/AACTTT	5																																																																											5
AAATAC/ATTTGT	10	1																																																																										11
AAATAG/ATTTCT	10	1																																																																										11
AAATAT/ATATTT	24	3																																																																										27
AAATCC/ATTTGG	1																																																																											1
AAATCG/ATTTCG	4																																																																											4
AAATCT/AGATTT	3																																																																											3
AAATGC/ATTTGC	3																																																																											3
AAATGG/ATTTCC	16																																																																											16
AAATGT/ACATTT	45	7	3		3	1			1	1																																																																		61
AAATTC/AATTTG	220	26	2																																																																									248
AAATTG/AATTTC	10	1																																																																										11
AAATTT/AAATTT	22																																																																											22
AACAAT/ATTGTT	11																																																																											11
AACACC/GGTGTT	5																																																																											5
AACACT/AGTGTT		1																																																																										1
AACAGC/CTGTTG	42																																																																											42
AACAGT/ACTGTT	2																																																																											2
AACATC/ATGTTG	1																																																																											1
AACATG/ATGTTC	1																																																																											1
AACATT/AATGTT	3																																																																											3
AACCAC/GGTTGT	5	1																																																																										6
AACCAG/CTGGTT	3																																																																											3
AACCAT/ATGGTT	1																																																																											1
AACCCG/CGGGTT	1																																																																											1
AACCGC/CGGTTG	1																																																																											1
AACCGT/ACGGTT	4																																																																											4
AACCTT/AAGGTT	1																																																																											1
AACGAT/ATCGTT	3																																																																											3
AACGGC/CCGTTG	2																																																																											2
AACGGT/ACCGTT	1																																																																											1
AACGTC/ACGTTG	3																																																																											3
AACGTG/ACGTTC	2																																																																											2
AACGTT/AACGTT	2																																																																											2
AACTAC/AGTTGT	1																																																																											1
AACTAG/AGTTCT	3	1																																																																										4
AACTAT/AGTTAT	2																																																																											2
AACTCT/AGAGTT	1																																																																											1
AACTGC/AGTTGC	1																																																																											1
AACTGG/AGTTCC	1	1																																																																										2
AACTGT/ACAGTT	2																																																																											2
AACTTC/AAGTTG	3																																																																											3
AACTTG/AAGTTC	1																																																																											1
AAGAAT/ATTCTT	6																																																																											6
AAGACC/CTTGGT	3																																																																											3
AAGACT/AGTCTT	1																																																																											1
AAGAGC/CTCTTG	1																																																																											1
AAGAGG/CCTCTT	1																																																																											1
AAGAGT/ACTCTT	1																																																																											1
AAGATC/ATCTTG	2																																																																											2
AAGATG/ATCTTC	4																																																																											4
AAGATT/AATCTT	2																																																																											2
AAGCAC/CTTGTG	1																																																																											1
AAGCAG/CTGCTT	2																																																																											2
AAGCAT/ATGCTT	1	1																																																																										2
AAGCCT/AGGCTT	1																																																																											1
AAGCGC/CGCTTG	1																																																																											1
AAGCGG/CCGCTT	4																																																																											4
AAGCGT/ACGCTT	1																																																																											1
AAGCTC/AGCTTG	2																																																																											2
AAGCTG/AGCTTC	1																																																																											1
AAGCTT/AAGCTT	1																																																																											1
AAGGAC/CCTTGT	3																																																																											3
AAGGAG/CCTTCT	3	1								1																																																																		5
AAGGAT/ATCCTT	6	1																																																																										7
AAGGCG/CCTTCG	2																																																																											2
AAGGCT/AGCCTT	1																																																																											1
AAGGGC/CCCTTG	2																																																																											2
AAGGGG/CCCCTT	1																																																																											1
AAGGTG/ACCTTC		1																																																																										1
AAGTAC/ACTTGT	3																																																																											3
AAGTAG/ACTTCT	2																																																																											2
AAGTAT/ACTTAT	6																																																																											6
AAGTCC/ACTTGG	1																																																																											1
AAGTCT/ACTTAG	1																																																																											1
AAGTGT/ACACTT	1																																																																											1
AATACC/ATTGGT	1																																																																											1
AATACG/ATTCGT	14	2																																																																										16
AATACT/AGTATT	4																																																																											4
AATAGC/ATTGCT	2																																																																											2
AATAGG/ATTCCT	1																																																																											1
AATAGT/ACTATT	4																																																																											4
AATATC/ATATTG	4																																																																											4
AATATG/ATATTC	10	1																																																																										11
AATATT/AATATT	10																																																																											10
AATCAC/ATTGTG	1																																																																											1
AATCAG/ATTCTG	13																																																																											13
AATCAT/ATGATT	8	1																																																																										9
AATCCT/AGGATT	128	29	15		2																																																																							174
AATCGC/ATTGCG	2																																																																											2
AATCGT/ACGATT	1																																																																											1
AATCTG/AGATTC	2																																																																											2
AATGAC/ATTGTC	7																																																																											7
AATGAG/ATTCTC	1																																																																											1
AATGAT/ATCATT	6	1	1			1																																																																						9
AATGCC/ATTGGC	3																																																																											3
AATGCG/ATTCGC	15	25																																																																										40
AATGCT/AGCATT	1																																																																											1
AATGGC/ATTGCC	3	1																																																																										4
AATGGG/ATTCCC	1																																																																											1
AATGTC/ACATTG	20																																																																											20
AATGTG/ACATTC	1																																																																											1
AATTAC/AATTGT			1																																																																									1
AATTAG/AATTCT	5																																																																											5
AATTAT/AATTAT	26	1																																																																										27
AATTCC/AATTGG	1	1																																																																										2
AATTCG/AATTCG	1																																																																											1
AATTGC/AATTGC	1	1																																																																										2
ACACAG/CTGTGT	1																																																																											1
ACACAT/ATGTGT	5	1																																																																										6
ACACCC/GGGTGT	2																																																																											2
ACACCG/CGGTGT	2		1																																																																									3
ACACCT/AGGTGT	2																																																																											2
ACACGC/CGTGTG	7	2																																																																										9
ACACGG/CCGTGT	1																																																																											1
ACACGT/ACGTGT	2																																																																											2
ACACTC/AGTGTG	3																																																																											3
ACACTG/AGTGTC	6																																																																											6
ACAGAT/ATCTGT	4																																																																											4
ACAGCG/CGCTGT	2																																																																											2
ACAGGG/CCCTGT	2																																																																											2
ACAGGT/ACCTGT	2																																																																											2
ACAGTG/ACTGTC	10																																																																											10
ACATAG/ATGTCT	2																																																																											2
ACATAT/ATATGT	18	3	1																																																																									22
ACATCC/ATGTGG	2																																																																											2
ACATCT/AGATGT	84	4																																																																										88
ACATGC/ATGTGC	3																																																																											3
ACATGG/ATGTCC	2																																																																											2
ACATGT/ACATGT	5																																																																											5
ACCACG/CGTGGT	1																																																																											1
ACCACT/AGTGGT	2																																																																											2
ACCAGC/CTGGTG	3	1			1																																																																							5
ACCAGG/CCTGGT	2																																																																											2
ACCAGT/ACTGGT	2	1																																																																										3
ACCATC/ATGGTG	3																																																																											3
ACCATG/ATGGTC	1																																																																											1
ACCCAT/ATGGGT	1																																																																											1
ACCCCC/GGGGGT	2																																																																											2
ACCCGC/CGGGTG	7	1	1																																																																									9
ACCCGG/CCGGGT	1																																																																											1
ACCCTC/AGGGTG	2																																																																											2
ACCGCC/CGGTGG	6	3																																																																										9
ACCGCG/CGCGGT	4		1																																																																									5
ACCGCT/AGCGGT	2																																																																											2
ACCGGC/CCGGTG	2																																																																											2
ACCGGG/CCCGGT	7	1																																																																										8
ACCGTC/ACGGTG	1																																																																											1
ACCGTG/ACGGTC	5		1																																																																									6
ACCTAT/AGGTAT	13																																																																											13
ACCTCT/AGAGGT	1																																																																											1
ACCTGC/AGGTGC	1																																																																											1
ACCTGG/AGGTCC	1																																																																											1
ACGAGT/ACTCGT	1																																																																											1
ACGATG/ATCGTC	6	1																																																																										7
ACGCAG/CGTCTG	1																																																																											1
ACGCCC/CGTGGG	16	4																																																																										20
ACGCCG/CGGCGT	3	2																																																																										5
ACGCCT/AGGCGT	1																																																																											1
ACGCGC/CGCGTG	7																																																																											7
ACGCGG/CCGCGT	1	1																																																																										2
ACGGAT/ATCCGT	7	1																																																																										8
ACGGCG/CCGTCG	2	1																																																																										3
ACGGCT/AGCCGT	2																																																																											2
ACTATC/AGTGAT	2																																																																											2
ACTATG/AGTCAT	3																																																																											3
ACTCAG/AGTCTG	2																																																																											2
ACTCAT/AGTATG	2																																																																											2
ACTCCC/AGTGGG	5	2																																																																										7
ACTCCG/AGTCGG	1																																																																											1
ACTCCT/AGGAGT	2																																																																											2
ACTCGC/AGTGCG	1																																																																											1
ACTCGG/AGTCCG	1																																																																											1
ACTCTC/AGAGTG	2	2																																																																										4
ACTGAG/AGTCTC	2																																																																											2
ACTGAT/AGTATC	1																																																																											1
ACTGCC/AGTGGC	2																																																																											2
ACTGCG/AGTCGC	1																																																																											1
ACTGCT/AGCAGT	1																																																																											1
ACTGGC/AGTGCC	1																																																																											1
AGAGAT/ATCTCT	2	1																																																																										3
AGAGCT/AGCTCT	2																																																																											2
AGAGGC/CCTCTG	3																																																																											3
AGAGGG/CCCTCT	1																																																																											1
AGATAT/ATATCT	6																																																																											6
AGATCC/ATCTGG	3																																																																											3
AGATCT/AGATCT	1																																																																											1
AGATGG/ATCTCC	2	1																																																																										3
AGCAGG/CCTGCT	1																																																																											1
AGCATC/ATGCTG	1																																																																											1
AGCATG/ATGCTC	2																																																																											2
AGCCCC/CTGGGG	2																																																																											2
AGCCCT/AGGGCT	1																																																																											1
AGCCGC/CGGCTG	15																																																																											15
AGCCGG/CCGGCT	2																																																																											2
AGCGCC/CGCTGG	3																																																																											3
AGCGGC/CCGCTG	2																																																																											2
AGCGGG/CCCGCT	2																																																																											2
AGCTCC/AGCTGG	1																																																																											1
AGGATC/ATCCTG	1	1																																																																										2
AGGCAT/ATGCCT	1	1																																																																										2
AGGCCT/AGGCCT	1																																																																											1
AGGCGC/CCTGCG	5	3																																																																										8
AGGCGG/CCGCCT	6	2	1	1																																																																								10
AGGGCG/CCCTCG	2	2																																																																										4
AGGGGG/CCCCCT	6	1																																																																										7
ATATCC/ATATGG	2																																																																											2
ATATCG/ATATCG	2																																																																											2
ATATGC/ATATGC	3																																																																											3
ATCATG/ATCATG	1	1																																																																										2
ATCCGC/ATGCGG	1																																																																											1
ATCGCG/ATCGCG	1																																																																											1
ATGCCC/ATGGGC	5																																																																											5
CCCCCG/CGGGGG	3	1																																																																										4
CCCCGG/CCGGGG	5																																																																											5
CCCGCG/CGCGGG	11	1																																																																										12
CCCGGG/CCCGGG	2																																																																											2
CCGGCG/CCGGCG	2																																																																											2
