Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018230825.1/fasta/hub_GCA_018230825.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              185611
Total size of examined sequences (bp):           60472275
Total number of identified SSRs:                 6815
Number of SSR containing sequences:              6319
Number of sequences containing more than 1 SSR:  425
Number of SSRs present in compound formation:    288


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	1617
2	648
3	585
4	1256
5	2240
6	469

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	6	9	6		4	2	2		4				1	1	2						2					1																																45
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	56	50	50	30	37	48	34	37	25	32	32	29	25	16	27	12	22	26	15	10	13	8	13	11	5	9	1	6	4	8	8	4	2	5	4	1	1		1		1							1						1					720
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	41	60	64	45	33	31	38	53	33	36	27	29	28	24	16	20	24	15	22	12	20	15	16	11	6	8	6	4	2	6	2	6	4	5	3	3	1			1				1															771
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	9	4	5	3	6	3	4	1	5	2	3			2	2	2				3	1	3	1		1						1									2			1		1										4	2	1	81
AC	-	-	-	40	20	6	6	2	2		2	1			2																																																													81
AG	-	-	-	18	8	7	3	1		2						1																																																												40
AT	-	-	-	37	11	4	2	1		1	1																																																																	57
CA	-	-	-	27	12	4	5	2	4		1		3	1																																																														59
CG	-	-	-	4																																																																								4
CT	-	-	-	12	7	2	4	1	1	1			1																																																															29
GA	-	-	-	16	6	1	1			1			1							1																																																								27
GC	-	-	-	6		1																																																																						7
GT	-	-	-	29	18	14	7	3		1		1	2											1			1							1																																										78
TA	-	-	-	62	26	5	3			1			1	1																																																														99
TC	-	-	-	22	13	11	6	1			2							2																																																										57
TG	-	-	-	48	24	16	3	6	2	2	2	1	2	1	2								1																																																					110
AAC	-	-	2	1																																																																								3
AAG	-	-	10	2	3																																																																							15
AAT	-	-	39	16	4	3																																																																						62
ACA	-	-	2				1	1																																																																				4
ACC	-	-	4	1																																																																								5
ACG	-	-	1																																																																									1
ACT	-	-		2		1				1																																																																		4
AGA	-	-	2																																																																									2
AGC	-	-	1																																																																									1
AGG	-	-	1	1																																																																								2
AGT	-	-	4		1																																																																							5
ATA	-	-	51	6	3	1		2																																																																				63
ATC	-	-	3	1		1				1																																																																		6
ATG	-	-	6	1																																																																								7
ATT	-	-	30	7	6	1																																																																						44
CAA	-	-	4	1							1																																																																	6
CAC	-	-		1	1																																																																							2
CAG	-	-	3			1																																																																						4
CAT	-	-	4	2		2																																																																						8
CCA	-	-	2																																																																									2
CCG	-	-	1	1																																																																								2
CCT	-	-			1			1																																																																				2
CGC	-	-	4			1																																																																						5
CGG	-	-	3																																																																									3
CTA	-	-	2	2																																																																								4
CTC	-	-		1																																																																								1
CTG	-	-	2																																																																									2
CTT	-	-	10	1																																																																								11
GAA	-	-	3	4		1																																																																						8
GAG	-	-		1	1																																																																							2
GAT	-	-	2	1																																																																								3
GCC	-	-	4	1		1																																																																						6
GCG	-	-	3																																																																									3
GCT	-	-	3																																																																									3
GGA	-	-	1																																																																									1
GGC	-	-	4	2																																																																								6
GGT	-	-					1																																																																					1
GTA	-	-	2	1			1																																																																					4
GTT	-	-		2																																																																								2
TAA	-	-	32	14			1																																																																					47
TAC	-	-	4																																																																									4
TAG	-	-	6	2	2			1																																																																				11
TAT	-	-	52	13	6																																																																							71
TCA	-	-	8	3																																																																								11
TCC	-	-	2	1	1																																																																							4
TCG	-	-		1																																																																								1
TCT	-	-	8	2		1																																																																						11
TGA	-	-	10	3	2					1																																																																		16
TGC	-	-	2																																																																									2
TGG	-	-	1	1																																																																								2
TGT	-	-	3	2		2																																																																						7
TTA	-	-	38	11	5	5	2		1																																																																			62
TTC	-	-	6	1	1																																																																							8
TTG	-	-	10	2	1																																																																							13
AAAC	-	6	1																																																																									7
AAAG	-	1																																																																										1
AAAT	-	32	5	1	1																																																																							39
AACA	-	3	1	1																																																																								5
AAGA	-	2																																																																										2
AAGC	-	1																																																																										1
AAGT	-	1																																																																										1
AATA	-	30	9	5	7				1	1																																																																		53
AATC	-	4																																																																										4
AATG	-	2																																																																										2
AATT	-	6																																																																										6
ACAA	-	10	2	1			1																																																																					14
ACAG	-	6	1		1			1		1					1	1	1																																																											13
ACAT	-	17	5	1	5				1		1																																																																	30
ACCG	-				1																																																																							1
ACCT	-	5	1																																																																									6
ACGA	-	1																																																																										1
ACGC	-	1																																																																										1
ACGT	-		1																																																																									1
ACTC	-	1																																																																										1
ACTG	-	3	3			1												1																																																										8
ACTT	-	5																																																																										5
AGAA	-	2	1																																																																									3
AGAC	-	3	1																																																																									4
AGAT	-	2																																																																										2
AGGG	-	1																																																																										1
AGGT	-	5	1																																																																									6
AGTA	-	2																																																																										2
AGTC	-	3	1																																																																									4
AGTT	-		1																																																																									1
ATAA	-	25	12	3	1																																																																							41
ATAC	-	37	3	3	3		1																																																																					47
ATAG	-	3	2																																																																									5
ATCA	-			2																																																																								2
ATCC	-	5	1																																																																									6
ATCT	-	1																																																																										1
ATGA	-	2	2																																																																									4
ATGG	-	3																																																																										3
ATGT	-	11	3	3	1																																																																							18
ATTA	-	7																																																																										7
ATTC	-	4	2	1									1																																																															8
ATTG	-		1																																																																									1
ATTT	-	24	5	1																																																																								30
CAAA	-	5	1																																																																									6
CAAC	-	2																																																																										2
CAAG	-	1																																																																										1
CACT	-	1																																																																										1
CAGA	-	5								1						1																																																												7
CAGT	-	1		1																																																																								2
CATA	-	12	8	1																																																																								21
CATC	-	9	1																																																																									10
CATT	-	3																																																																										3
CCAT	-	1																																																																										1
CCGC	-	1																																																																										1
CCTA	-	4	1																																																																									5
CGAA	-	1																																																																										1
CGAG	-	1																																																																										1
CGGA	-	1																																																																										1
CGTA	-		1																																																																									1
CGTC	-	1																																																																										1
CTAA	-	1																																																																										1
CTAC	-	14	1	1		1																																																																						17
CTAT	-	2																																																																										2
CTGA	-	4		1			1																																																																					6
CTGC	-	1																																																																										1
CTGG	-									1																																																																		1
CTGT	-	3									1																																																																	4
CTTC	-														1																																																													1
CTTT	-		2																																																																									2
GAAA	-	1																																																																										1
GAAG	-	1									1																																																																	2
GAAT	-	3	2																																																																									5
GACA	-	7								1	1																																																																	9
GACG	-	2																																																																										2
GACT	-	3																																																																										3
GAGT	-	1	1																																																																									2
GATA	-	2	1	1																																																																								4
GATG	-	9	1																																																																									10
GATT	-	2																																																																										2
GCAA	-		1																																																																									1
GCAC	-		1																																																																									1
GCTA	-	1																																																																										1
GGAA	-	2																																																																										2
GGCC	-	1																																																																										1
GGCT	-									1	1				1																																																													3
GGTA	-	7	1																																																																									8
GTAA	-	4	1																																																																									5
GTAC	-	1	1																																																																									2
GTAG	-	11	1																																																																									12
GTAT	-	10	1																																																																									11
GTCA	-	3	1	1	2			1																																																																				8
GTCC	-		1																																																																									1
GTCT	-	4																																																																										4
GTGA	-	1																																																																										1
GTGC	-	1																																																																										1
GTTG	-					1																																																																						1
GTTT	-	3	3	2	1			1																																																																				10
TAAA	-	35	13	3			1																																																																					52
TAAC	-	1		1																																																																								2
TAAG	-	5																																																																										5
TAAT	-	8																																																																										8
TACA	-	28	6	3														1																																																										38
TACC	-	32	2																																																																									34
TACG	-	2																																																																										2
TACT	-	3																																																																										3
TAGA	-	5																																																																										5
TAGC	-	1																																																																										1
TAGG	-	15	1				1																																																																					17
TAGT	-	2																																																																										2
TATC	-	6					1																																																																					7
TATG	-	49	20	3	4	1	1	1																																																																				79
TATT	-	44	8	1	1																																																																							54
TCAA	-	3			1																																																																							4
TCAC	-	1																																																																										1
TCAG	-	5	7	1	1		1																																																																					15
TCAT	-	5	1																																																																									6
TCCA	-	5																																																																										5
TCTA	-	1																																																																										1
TCTG	-	6	4	4		1				1		1			1																																																													18
TCTT	-	5																																																																										5
TGAA	-		1																																																																									1
TGAC	-	13	9	2	1		1																																																																					26
TGAG	-	3	1																																																																									4
TGAT	-				1																																																																							1
TGGA	-	3	1																																																																									4
TGTA	-	17	5	1	1			1																																																																				25
TGTC	-	9	2	2	1	1	2		1		1			1						1																																																								21
TGTT	-	7	1																																																																									8
TTAA	-	7	4																																																																									11
TTAC	-	4	1																																																																									5
TTAT	-	51	7	4	1																																																																							63
TTCA	-	8	2																																																																									10
TTCG	-	3																																																																										3
TTCT	-	4																																																																										4
TTGA	-	1																																																																										1
TTGG	-	2																																																																										2
TTGT	-	5	2	1		1																																																																						9
TTTA	-	56	6	2	1																																																																							65
TTTC	-	5	1	2																																																																								8
TTTG	-	9					1																																																																					10
AAAAC	12																																																																											12
AAAAG	12																																																																											12
AAAAT	47	1																																																																										48
AAACA	10																																																																											10
AAACC	2																																																																											2
AAACG	2																																																																											2
AAACT	5	1																																																																										6
AAAGA	4																																																																											4
AAAGC	2																																																																											2
AAAGT	2																																																																											2
AAATA	34																																																																											34
AAATC	13	3																																																																										16
AAATG	7		1																																																																									8
AAATT	21	2																																																																										23
AACAA	8																																																																											8
AACAC	2																																																																											2
AACAT	4																																																																											4
AACCA	1																																																																											1
AACCT	3	2																																																																										5
AACGA	5																																																																											5
AACGT	1																																																																											1
AACTA	7																																																																											7
AACTC	2																																																																											2
AAGAA	4																																																																											4
AAGAC	1																																																																											1
AAGAT	1																																																																											1
AAGCA	2																																																																											2
AAGCT	1																																																																											1
AAGGT	4																																																																											4
AAGTA	3																																																																											3
AAGTC		2																																																																										2
AAGTG	4																																																																											4
AAGTT	1																																																																											1
AATAA	38	1																																																																										39
AATAC	6		1																																																																									7
AATAG	1																																																																											1
AATAT	12																																																																											12
AATCA	7	3																																																																										10
AATCC	1																																																																											1
AATCG	1																																																																											1
AATCT	3																																																																											3
AATGA	13																																																																											13
AATGC	1																																																																											1
AATGG	2	1																																																																										3
AATGT	4																																																																											4
AATTA	17																																																																											17
AATTC	2	1																																																																										3
AATTG	5	1																																																																										6
AATTT	18	1	1																																																																									20
ACAAA	5																																																																											5
ACAAC	3																																																																											3
ACAAT	3	1																																																																										4
ACACA	6																																																																											6
ACACC	1																																																																											1
ACACG	3																																																																											3
ACACT	4	1																																																																										5
ACAGA	2																																																																											2
ACAGG		1																																																																										1
ACATA	3																																																																											3
ACATG	1																																																																											1
ACATT	8																																																																											8
ACCAA	4																																																																											4
ACCGC	1																																																																											1
ACCTA	6					3		1																																																																				10
ACGAC	1	1																																																																										2
ACGAT	2																																																																											2
ACGCA	1																																																																											1
ACGGC	1																																																																											1
ACGTA	1																																																																											1
ACGTC	1																																																																											1
ACTAA	2																																																																											2
ACTAG	1																																																																											1
ACTAT	2	1																																																																										3
ACTCA	5																																																																											5
ACTCC	1																																																																											1
ACTCG	1																																																																											1
ACTGA	3	1																																																																										4
ACTGC	2																																																																											2
ACTTC	3																																																																											3
AGAAA	2																																																																											2
AGAAG	2																																																																											2
AGAAT	1																																																																											1
AGACA	3																																																																											3
AGACG	2																																																																											2
AGAGA	1																																																																											1
AGAGC	1																																																																											1
AGAGT	2																																																																											2
AGATA	2	1						1																																																																				4
AGATT	2																																																																											2
AGCAA	1	1																																																																										2
AGCAC	1																																																																											1
AGCAT	1																																																																											1
AGCGA	2																																																																											2
AGCGT	1																																																																											1
AGCTA	1																																																																											1
AGGAC	1																																																																											1
AGGAG	2																																																																											2
AGGCG			1																																																																									1
AGGCT	1																																																																											1
AGGGT	2																																																																											2
AGGTA	2																																																																											2
AGGTT	5	1		1																																																																								7
AGTAA	3																																																																											3
AGTAC	1	1																																																																										2
AGTAT	1																																																																											1
AGTCA	2																																																																											2
AGTCT	1																																																																											1
AGTGA	4																																																																											4
AGTGG	1																																																																											1
AGTGT	1																																																																											1
AGTTA	1																																																																											1
AGTTC	4																																																																											4
AGTTT	1	1																																																																										2
ATAAA	23																																																																											23
ATAAC	1																																																																											1
ATAAG		1																																																																										1
ATAAT	9	1																																																																										10
ATACA	3																																																																											3
ATACC	1																																																																											1
ATACG	2																																																																											2
ATACT	2																																																																											2
ATAGA	2	2																																																																										4
ATAGT	1																																																																											1
ATATA	11																																																																											11
ATATC	1																																																																											1
ATATT	7																																																																											7
ATCAA	10	2	1																																																																									13
ATCAC	3																																																																											3
ATCCA	2																																																																											2
ATCCT		1																																																																										1
ATCGA	2																																																																											2
ATCGT	1																																																																											1
ATCTA	3																																																																											3
ATCTC	2																																																																											2
ATCTT	3																																																																											3
ATGAA	5																																																																											5
ATGAC	10																																																																											10
ATGAG	2																																																																											2
ATGAT	1																																																																											1
ATGCA	1																																																																											1
ATGCC	1																																																																											1
ATGCT	2																																																																											2
ATGGA	1																																																																											1
ATGGC	1																																																																											1
ATGTA	5																																																																											5
ATGTC	11																																																																											11
ATGTG	2																																																																											2
ATTAA	16	2																																																																										18
ATTAC	1	1																																																																										2
ATTAG	1																																																																											1
ATTAT	4																																																																											4
ATTCA	4		1																																																																									5
ATTCC	5	1	3			2																																																																						11
ATTCG	3																																																																											3
ATTCT	4																																																																											4
ATTGA	2																																																																											2
ATTGT	8	1																																																																										9
ATTTA	13																																																																											13
ATTTC	9																																																																											9
ATTTG	8	1																																																																										9
ATTTT	36	3																																																																										39
CAAAA	7																																																																											7
CAAAC	2																																																																											2
CAAAG	2																																																																											2
CAAAT	9																																																																											9
CAACA	4																																																																											4
CAAGC	1																																																																											1
CAAGG	1																																																																											1
CAATA	2	1																																																																										3
CAATG	1																																																																											1
CAATT	1	1																																																																										2
CACAA	5	1																																																																										6
CACAG	1																																																																											1
CACAT	2																																																																											2
CACCG	1																																																																											1
CACGA	1																																																																											1
CACGC	1																																																																											1
CACGT	2																																																																											2
CACTA	3																																																																											3
CACTT	2																																																																											2
CAGAA	1																																																																											1
CAGAC	1																																																																											1
CAGAT	1																																																																											1
CAGCG	1																																																																											1
CAGGA	1	1																																																																										2
CAGGC	1																																																																											1
CAGTA	2																																																																											2
CAGTC	1																																																																											1
CATAA	4																																																																											4
CATAC	2																																																																											2
CATAG	1																																																																											1
CATCA	1																																																																											1
CATGA	1																																																																											1
CATGT	2																																																																											2
CATTA	5																																																																											5
CATTC	5	1	2	1	1																																																																							10
CATTT	5		1																																																																									6
CCAAA	2																																																																											2
CCAAT	1																																																																											1
CCACA	1																																																																											1
CCACG	1																																																																											1
CCATG	1																																																																											1
CCATT	4	1																																																																										5
CCCAT	1																																																																											1
CCCGC	1																																																																											1
CCGAC	1																																																																											1
CCGAG	1																																																																											1
CCGCA	2																																																																											2
CCGTA	1																																																																											1
CCTAA	5				1				1	1																																																																		8
CCTAG	1																																																																											1
CCTAT	1																																																																											1
CCTCC	4																																																																											4
CCTGA	1																																																																											1
CCTGT	1																																																																											1
CGAAT	2																																																																											2
CGACA	2																																																																											2
CGACC	1																																																																											1
CGACG	2																																																																											2
CGACT			1																																																																									1
CGAGA	1																																																																											1
CGAGG	1																																																																											1
CGAGT	1																																																																											1
CGATA	4																																																																											4
CGATT	2																																																																											2
CGCAT	1																																																																											1
CGCCC	1																																																																											1
CGCCG	6																																																																											6
CGCCT	1																																																																											1
CGCGA	1																																																																											1
CGCGC	4																																																																											4
CGCGG	1																																																																											1
CGCTA	1																																																																											1
CGGCA			1																																																																									1
CGGCG	7	1																																																																										8
CGGGG	1																																																																											1
CGTAA	4																																																																											4
CGTAC	2																																																																											2
CGTAT	1																																																																											1
CGTCA	1	1																																																																										2
CGTCG	1																																																																											1
CGTGA	4																																																																											4
CGTGG	1																																																																											1
CGTGT	1																																																																											1
CGTTA	1																																																																											1
CGTTT	2	1																																																																										3
CTAAA	6																																																																											6
CTAAC	10	2	3			1	1			1																																																																		18
CTAAG	1																																																																											1
CTACA	1																																																																											1
CTACC	1																																																																											1
CTATA	3																																																																											3
CTATC	1																																																																											1
CTATG	1																																																																											1
CTATT	1		1																																																																									2
CTCAG	1																																																																											1
CTCAT	1																																																																											1
CTCCA	1																																																																											1
CTCCC	1																																																																											1
CTCGC	1																																																																											1
CTCTC	3																																																																											3
CTCTG	1																																																																											1
CTCTT	1																																																																											1
CTGAA	2																																																																											2
CTGAC	2																																																																											2
CTGAT	2																																																																											2
CTGCG	1																																																																											1
CTGCT	1																																																																											1
CTGTA	1																																																																											1
CTGTC	1	1										1																																																																3
CTGTG	3																																																																											3
CTTAA	3																																																																											3
CTTAC	1																																																																											1
CTTAG	1																																																																											1
CTTCA	2																																																																											2
CTTCG	1																																																																											1
CTTCT	1																																																																											1
CTTGA	3																																																																											3
CTTGG	1																																																																											1
CTTTA	1																																																																											1
CTTTT	8	1																																																																										9
GAAAA	7																																																																											7
GAAAC	1																																																																											1
GAAAG	1																																																																											1
GAAAT	4			1																																																																								5
GAACA	1																																																																											1
GAACG	1																																																																											1
GAACT	2																																																																											2
GAAGC	1																																																																											1
GAATA	4																																																																											4
GAATC	1																																																																											1
GAATG	3	1	1				1																																																																					6
GAATT	3																																																																											3
GACAA	1																																																																											1
GACAC	2																																																																											2
GACAG							1																																																																					1
GACAT	2																																																																											2
GACGA	1																																																																											1
GACTC	1																																																																											1
GAGAA	1	1																																																																										2
GAGAG	1	1																																																																										2
GAGGA	3																																																																											3
GAGGG	1																																																																											1
GAGTT	1																																																																											1
GATAA	2																																																																											2
GATAG	1																																																																											1
GATAT	1																																																																											1
GATGA	2																																																																											2
GATGC	1																																																																											1
GATGG	1																																																																											1
GATTA	1																																																																											1
GATTT	5	1																																																																										6
GCAAA	1																																																																											1
GCAAT	2																																																																											2
GCAGT	1																																																																											1
GCATG	2																																																																											2
GCCAA	1																																																																											1
GCCGC	3																																																																											3
GCGAC	1																																																																											1
GCGAG	1																																																																											1
GCGAT	1																																																																											1
GCGCC	2	1																																																																										3
GCGCG	1	1																																																																										2
GCGCT	1																																																																											1
GCGGC	3																																																																											3
GCGTC	2																																																																											2
GCGTT	1																																																																											1
GCTAC	1																																																																											1
GCTCG	1																																																																											1
GCTGG	2																																																																											2
GCTTA	2																																																																											2
GCTTT	1																																																																											1
GGAAA	1																																																																											1
GGAAG	1																																																																											1
GGAAT	1	3				1																																																																						5
GGATT	2																																																																											2
GGCAT	1																																																																											1
GGCCA	1																																																																											1
GGCGA		1																																																																										1
GGCGC	1																																																																											1
GGCTC	1																																																																											1
GGGAG	1																																																																											1
GGGGA	2																																																																											2
GGGGC	2																																																																											2
GGGGT	1																																																																											1
GGGTA	1																																																																											1
GGGTG	1																																																																											1
GGTAA		1																																																																										1
GGTAG	1																																																																											1
GGTAT	1																																																																											1
GGTTA	4	1	3	2		1		1																																																																				12
GGTTC	1																																																																											1
GGTTT	4																																																																											4
GTAAG	1																																																																											1
GTAAT	1																																																																											1
GTACA	1																																																																											1
GTACT	2																																																																											2
GTATC	2																																																																											2
GTATG	1																																																																											1
GTATT	4		1																																																																									5
GTCAA	6																																																																											6
GTCAC	1																																																																											1
GTCAT	7	1																																																																										8
GTCCC	1																																																																											1
GTCCG	1																																																																											1
GTCCT	1																																																																											1
GTCGA	1																																																																											1
GTCGC	1																																																																											1
GTCTA	1																																																																											1
GTCTT	1																																																																											1
GTGAC	4																																																																											4
GTGAT	2																																																																											2
GTGCA	3																																																																											3
GTGCG	2																																																																											2
GTGCT	1	2																																																																										3
GTGTA	2																																																																											2
GTGTC	2																																																																											2
GTGTG	3																																																																											3
GTGTT	1																																																																											1
GTTAC	2																																																																											2
GTTAG	9	1				3	1	1	1		1																																																																	17
GTTAT	1																																																																											1
GTTCA	2																																																																											2
GTTCC	1																																																																											1
GTTGG	1																																																																											1
GTTGT	6																																																																											6
GTTTA	5																																																																											5
GTTTT	11	1																																																																										12
TAAAA	40																																																																											40
TAAAC	2	1																																																																										3
TAAAG	1																																																																											1
TAAAT	13																																																																											13
TAACA	2																																																																											2
TAACC	4	1	1				1						1																																																															8
TAACG	1																																																																											1
TAAGA	2	2																																																																										4
TAAGG	2																																																																											2
TAATA	10	1																																																																										11
TAATC	3																																																																											3
TAATG	7																																																																											7
TAATT	12	1																																																																										13
TACAA	12	2																																																																										14
TACAC	2																																																																											2
TACAG	3																																																																											3
TACAT	4																																																																											4
TACCA	1																																																																											1
TACCC	1																																																																											1
TACCG	1	1																																																																										2
TACCT	4																																																																											4
TACGA	3																																																																											3
TACGC	1																																																																											1
TACGG	3																																																																											3
TACTA	4																																																																											4
TACTC	1																																																																											1
TACTG	2	1																																																																										3
TACTT	3																																																																											3
TAGAA	6	1																																																																										7
TAGAC	2																																																																											2
TAGAT	1																																																																											1
TAGCA	2																																																																											2
TAGCT	1																																																																											1
TAGGT	5	1						1		1																																																																		8
TAGTA	4																																																																											4
TAGTC	1																																																																											1
TAGTG	1	1																																																																										2
TAGTT	4	1																																																																										5
TATAA	5	1																																																																										6
TATAC	1																																																																											1
TATAG	2																																																																											2
TATAT	11																																																																											11
TATCC	2																																																																											2
TATCG	1																																																																											1
TATGG	1																																																																											1
TATGT	3																																																																											3
TATTA	9	2																																																																										11
TATTC	1																																																																											1
TATTG	6	1																																																																										7
TATTT	35	4																																																																										39
TCAAA	7	3		1																																																																								11
TCAAC	2																																																																											2
TCAAG	1																																																																											1
TCAAT	2																																																																											2
TCACA	2																																																																											2
TCACC	1																																																																											1
TCACG	2	1																																																																										3
TCACT	1																																																																											1
TCAGA	3																																																																											3
TCAGC	1																																																																											1
TCAGT	3	2																																																																										5
TCATA	1																																																																											1
TCATG	1																																																																											1
TCATT	2																																																																											2
TCCAA	1																																																																											1
TCCAG	1																																																																											1
TCCAT	2		1																																																																									3
TCCCA	1																																																																											1
TCCGT	2																																																																											2
TCCTA	5																																																																											5
TCCTC	1																																																																											1
TCGAA	2																																																																											2
TCGAG	2	1																																																																										3
TCGAT	2																																																																											2
TCGCG	1																																																																											1
TCGCT	1																																																																											1
TCGGA	1																																																																											1
TCGGG	1																																																																											1
TCGGT	1																																																																											1
TCGTA	1																																																																											1
TCGTC	2																																																																											2
TCGTG	2																																																																											2
TCGTT	2																																																																											2
TCTAA	2																																																																											2
TCTAC	1																																																																											1
TCTAG	1	1																																																																										2
TCTAT	3																																																																											3
TCTCA	1																																																																											1
TCTCC	2																																																																											2
TCTCT	2																																																																											2
TCTGT	1																																																																											1
TCTTA	1																																																																											1
TCTTC	1																																																																											1
TCTTG	2																																																																											2
TCTTT	6																																																																											6
TGAAA	6			1																																																																								7
TGAAC	1																																																																											1
TGAAG	2																																																																											2
TGAAT	9	1																																																																										10
TGACA	13																																																																											13
TGACG	1																																																																											1
TGACT	2																																																																											2
TGAGA	3																																																																											3
TGAGG	2																																																																											2
TGAGT	2																																																																											2
TGATA	1																																																																											1
TGATC	1																																																																											1
TGATT	7																																																																											7
TGCAA	3																																																																											3
TGCAG	1																																																																											1
TGCAT	2																																																																											2
TGCGA		1																																																																										1
TGCTA	2																																																																											2
TGCTT	1																																																																											1
TGGAA	1	2																																																																										3
TGGAC	2																																																																											2
TGGAT	1																																																																											1
TGGCC	1																																																																											1
TGGTA	1																																																																											1
TGGTG	1	1																																																																										2
TGTAA	2	2																																																																										4
TGTAC	1																																																																											1
TGTAG	2																																																																											2
TGTAT	8																																																																											8
TGTCA	11	3																																																																										14
TGTCC	1		1	1																																																																								3
TGTCG	1																																																																											1
TGTCT	3																																																																											3
TGTGA	4																																																																											4
TGTGC	1																																																																											1
TGTGG	2																																																																											2
TGTGT	9																																																																											9
TGTTA	6																																																																											6
TGTTC		1																																																																										1
TGTTG	5	1																																																																										6
TGTTT	11																																																																											11
TTAAA	19																																																																											19
TTAAC	1																																																																											1
TTAAG	1																																																																											1
TTAAT	7	1																																																																										8
TTACA	6																																																																											6
TTACC	2																																																																											2
TTACT	3																																																																											3
TTAGA	1																																																																											1
TTAGG	5	1		1			1	2	1	1																																																																		12
TTAGT	3																																																																											3
TTATA	14				1																																																																							15
TTATC	1		1		1																																																																							3
TTATG	3																																																																											3
TTATT	25	1																																																																										26
TTCAA	4		1																																																																									5
TTCAC	4																																																																											4
TTCAG	2																																																																											2
TTCAT	10	1																																																																										11
TTCCA	9	1	3		1	1																																																																						15
TTCGA	2																																																																											2
TTCGT	2																																																																											2
TTCTA	5																																																																											5
TTCTC	3																																																																											3
TTCTG	2																																																																											2
TTCTT	4																																																																											4
TTGAA	2	2																																																																										4
TTGAC	1	1																																																																										2
TTGAG	1																																																																											1
TTGAT	5	1																																																																										6
TTGCA	2																																																																											2
TTGCC	1																																																																											1
TTGCG	1																																																																											1
TTGCT	1																																																																											1
TTGGA		1																																																																										1
TTGGC	1																																																																											1
TTGGT	3																																																																											3
TTGTA	6																																																																											6
TTGTC	1																																																																											1
TTGTG	4																																																																											4
TTGTT	13																																																																											13
TTTAA	16																																																																											16
TTTAC	5																																																																											5
TTTAG	2																																																																											2
TTTAT	39	3		1																																																																								43
TTTCA	13	2																																																																										15
TTTCG	2																																																																											2
TTTCT	7																																																																											7
TTTGA	13	4																																																																										17
TTTGC	4																																																																											4
TTTGG	2																																																																											2
TTTGT	5	1	1																																																																									7
TTTTA	52	2																																																																										54
TTTTC	14	2																																																																										16
TTTTG	12	1																																																																										13
AAAAAC	1																																																																											1
AAAAAG	2																																																																											2
AAAAAT	5																																																																											5
AAAATA	3																																																																											3
AAAATC	6	3																																																																										9
AAACAA	1																																																																											1
AAACTC	1																																																																											1
AAATAA	2																																																																											2
AAATCA		1																																																																										1
AAATGA	2																																																																											2
AAATGT	2																																																																											2
AAATTC	1	1	1																																																																									3
AAATTT	2																																																																											2
AACACA	1																																																																											1
AACATA	1																																																																											1
AACCGA	1	1																																																																										2
AACGTC	1																																																																											1
AACTCA	2																																																																											2
AACTTA	1																																																																											1
AACTTG	1																																																																											1
AAGAAA	3																																																																											3
AATAAA	3																																																																											3
AATAAG	1																																																																											1
AATATT	1																																																																											1
AATCAA	2	1																																																																										3
AATCAT			1																																																																									1
AATCTA	1																																																																											1
AATGAC	2																																																																											2
AATGAT	1																																																																											1
AATGTC	2																																																																											2
AATTCA	3																																																																											3
AATTTC	1																																																																											1
AATTTG	1	1																																																																										2
AATTTT	1																																																																											1
ACAATT		1																																																																										1
ACACCA	1																																																																											1
ACACGT	1																																																																											1
ACAGTG	1																																																																											1
ACATAG	1																																																																											1
ACATGA	1	1																																																																										2
ACCTAC	1																																																																											1
ACCTAT	1																																																																											1
ACGAAA	1																																																																											1
ACGCCC	1																																																																											1
ACGGCC	1																																																																											1
ACTATA		1																																																																										1
ACTGAC	2	1																																																																										3
ACTGTC	5																																																																											5
AGAACA	1																																																																											1
AGAGTC		1																																																																										1
AGATCT	1																																																																											1
AGCTTT	1																																																																											1
AGGGCA	1																																																																											1
AGGTAC	1																																																																											1
AGTCAA	1																																																																											1
AGTCCT	1																																																																											1
AGTGAA	1																																																																											1
AGTGAC	1																																																																											1
AGTGTC	2																																																																											2
AGTTAA	1																																																																											1
ATAAAA	3																																																																											3
ATAAAG	1																																																																											1
ATAAAT	2																																																																											2
ATACCA	1																																																																											1
ATACTT	1																																																																											1
ATAGAT	1																																																																											1
ATATAC	2																																																																											2
ATATAG	3																																																																											3
ATATTA	2																																																																											2
ATATTC	1																																																																											1
ATATTT	1																																																																											1
ATCAAA	2																																																																											2
ATCAAG	1																																																																											1
ATCAGA	2																																																																											2
ATCAGG				1																																																																								1
ATCCTG	1																																																																											1
ATCGTC	1																																																																											1
ATCTTG	1																																																																											1
ATGAAT		1																																																																										1
ATGTCA	1																																																																											1
ATGTGA	1																																																																											1
ATGTGT	1																																																																											1
ATTAAG	2																																																																											2
ATTAAT	1																																																																											1
ATTACG	1																																																																											1
ATTACT	1																																																																											1
ATTATA	1																																																																											1
ATTCAA	2	1																																																																										3
ATTCCA	1																																																																											1
ATTGTC	1	1																																																																										2
ATTTAT	1																																																																											1
ATTTCA	1																																																																											1
ATTTGT		1																																																																										1
ATTTTC	4	1																																																																										5
ATTTTG	4																																																																											4
ATTTTT	3																																																																											3
CAAAAT	4	1																																																																										5
CAAGAC	2																																																																											2
CAATAG		1																																																																										1
CACCAA	1																																																																											1
CACCCG	1																																																																											1
CACTAC	1																																																																											1
CACTCG	1																																																																											1
CACTGA	1																																																																											1
CACTGT	2																																																																											2
CATAGA	1																																																																											1
CATTTT	1																																																																											1
CCCGGT		1																																																																										1
CCGAAA	1	1																																																																										2
CCGTTC	1																																																																											1
CCTAAA							1																																																																					1
CCTATA	1																																																																											1
CCTATG	1																																																																											1
CCTGCA	1																																																																											1
CCTTGA	1																																																																											1
CCTTGC		1																																																																										1
CGAATG	1																																																																											1
CGATTG	1																																																																											1
CGCCCA	1																																																																											1
CGGCTG	1																																																																											1
CGTAGT	1																																																																											1
CTACAA	1																																																																											1
CTACCG	1																																																																											1
CTACCT	1																																																																											1
CTAGGT	1																																																																											1
CTCCCC	1																																																																											1
CTCTGA	1																																																																											1
CTCTTT	1																																																																											1
CTGACA	1																																																																											1
CTGTCA	3																																																																											3
CTTATC	1																																																																											1
CTTCAT	1																																																																											1
CTTTGA	2																																																																											2
CTTTTT	1																																																																											1
GAAAAT	1																																																																											1
GAAACT	1																																																																											1
GAAATA	1																																																																											1
GAAGCC	1																																																																											1
GAATCA	1																																																																											1
GAATTT	1																																																																											1
GACAAT	1																																																																											1
GACGAG		1																																																																										1
GAGAGT	1																																																																											1
GATAAA	2																																																																											2
GATAGT	1																																																																											1
GATTCA	1																																																																											1
GATTTT	4	2	2																																																																									8
GCAAAT	1																																																																											1
GCAACG	1																																																																											1
GCAGTA	1																																																																											1
GCGGGA	1																																																																											1
GCGTGT	1																																																																											1
GCTAAA	1																																																																											1
GCTGCG		1																																																																										1
GGCAAA	1																																																																											1
GGTTCA			1																																																																									1
GGTTCT	1																																																																											1
GGTTTA						1																																																																						1
GGTTTC	1																																																																											1
GTAGGC	1																																																																											1
GTATAC	1																																																																											1
GTCAAA	1																																																																											1
GTCATC	1																																																																											1
GTGCAG	1																																																																											1
GTGTAT	1																																																																											1
GTGTCA	1																																																																											1
GTGTTA	1																																																																											1
GTTAAT	1																																																																											1
GTTCCG	1																																																																											1
GTTTAG							1																																																																					1
TAAAAA	6																																																																											6
TAAAAT	1																																																																											1
TAAACC	2																																																																											2
TAAACT	1																																																																											1
TAAATA	2																																																																											2
TAAATT	1																																																																											1
TAACCA	1																																																																											1
TAAGAG	1																																																																											1
TAATTA	1																																																																											1
TAATTG	1																																																																											1
TAATTT	1																																																																											1
TACAAA	1																																																																											1
TACACA		1																																																																										1
TACATA		1																																																																										1
TACCAA	1																																																																											1
TACCTA	1																																																																											1
TAGGTA	1																																																																											1
TATAAA	1																																																																											1
TATAAC	1																																																																											1
TATAAT	3																																																																											3
TATAGA	1																																																																											1
TATATT	2																																																																											2
TATCAC	1																																																																											1
TATCTA	1																																																																											1
TATGAT	1																																																																											1
TATTAC	2																																																																											2
TATTAG	1	1																																																																										2
TATTTA		1																																																																										1
TATTTT	3																																																																											3
TCAAAA	6	2	1	1																																																																								10
TCAAAC	1																																																																											1
TCAAAG	1	1																																																																										2
TCACAC	1																																																																											1
TCACCA	1																																																																											1
TCATCG	2																																																																											2
TCATTA	1																																																																											1
TCATTG	2																																																																											2
TCCAGC				1																																																																								1
TCCCCC	1																																																																											1
TCCTGA		1																																																																										1
TCGATA	1																																																																											1
TCGGCA	1																																																																											1
TCGGTT	1																																																																											1
TCGTCA	1																																																																											1
TCGTCT	1																																																																											1
TCTATC	1																																																																											1
TCTCTA	1																																																																											1
TCTGCC	1																																																																											1
TCTGGA		1																																																																										1
TCTTTC	1																																																																											1
TGAAAA	3																																																																											3
TGACAA	2																																																																											2
TGACAC	2																																																																											2
TGACAG	4																																																																											4
TGACAT	1																																																																											1
TGACCT	1																																																																											1
TGACGA	1																																																																											1
TGACGT	1																																																																											1
TGACTC	1																																																																											1
TGAGCA	1																																																																											1
TGAGGC	1																																																																											1
TGAGTG	1																																																																											1
TGGGGG	1																																																																											1
TGGGTG	1																																																																											1
TGTCAA	7																																																																											7
TGTCAC	2																																																																											2
TGTCAG	3																																																																											3
TGTCAT	1																																																																											1
TGTGAT	1																																																																											1
TGTGCG			1																																																																									1
TGTTCA	1																																																																											1
TGTTGC	1																																																																											1
TGTTGG	1																																																																											1
TGTTTT	2																																																																											2
TTAAAA	2																																																																											2
TTAACT	1																																																																											1
TTAATT	1																																																																											1
TTACAA	1																																																																											1
TTATAA	1																																																																											1
TTATCA	1																																																																											1
TTATTC	1																																																																											1
TTCAAA	1																																																																											1
TTCAGC		1																																																																										1
TTCAGG		1																																																																										1
TTCATA	1																																																																											1
TTCTTT	2																																																																											2
TTGAAT	1																																																																											1
TTGACA	9	1																																																																										10
TTGACG	2																																																																											2
TTGACT	2																																																																											2
TTGAGA	1																																																																											1
TTGATG	2																																																																											2
TTGATT	1																																																																											1
TTGCTA	1																																																																											1
TTGCTG	1																																																																											1
TTGCTT	1																																																																											1
TTGTAT	1																																																																											1
TTGTCA	5	1																																																																										6
TTGTGA	1																																																																											1
TTGTTC	1																																																																											1
TTTAAC	1																																																																											1
TTTAAT	1																																																																											1
TTTACA	1																																																																											1
TTTAGG	1																																																																											1
TTTATT	3																																																																											3
TTTCAA	2																																																																											2
TTTCAT	1																																																																											1
TTTCGG	1																																																																											1
TTTCTT	1																																																																											1
TTTGAA	7	1	1																																																																									9
TTTGAC	3																																																																											3
TTTGAG	1	2																																																																										3
TTTGAT	4																																																																											4
TTTGTA	1	1																																																																										2
TTTGTT	1																																																																											1
TTTTAA	2																																																																											2
TTTTAT	7																																																																											7
TTTTCA	2																																																																											2
TTTTGA	3	1	1																																																																									5
TTTTTA	5																																																																											5

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	14	15	13	11	3	10	5	6	1	9	2	3		1	3	4	2				3	3	3	1		1	1					1									2			1		1										4	2	1	126
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	97	110	114	75	70	79	72	90	58	68	59	58	53	40	43	32	46	41	37	22	33	23	29	22	11	17	7	10	6	14	10	10	6	10	7	4	2		1	1	1			1				1						1					1491
AC/GT	-	-	-	144	74	40	21	13	8	3	5	3	7	2	4								1	1			1							1																																										328
AG/CT	-	-	-	68	34	21	14	3	1	4	2		2			1		2		1																																																								153
AT/AT	-	-	-	99	37	9	5	1		2	1		1	1																																																														156
CG/CG	-	-	-	10		1																																																																						11
AAC/GTT	-	-	21	8	1	2	1	1			1																																																																	35
AAG/CTT	-	-	39	10	4	2																																																																						55
AAT/ATT	-	-	242	67	24	10	3	2	1																																																																			349
ACC/GGT	-	-	7	3	1		1																																																																					12
ACG/CGT	-	-	1	1																																																																								2
ACT/AGT	-	-	18	7	3	1	1	1		1																																																																		32
AGC/CTG	-	-	11			1																																																																						12
AGG/CCT	-	-	4	4	3			1																																																																				12
ATC/ATG	-	-	33	11	2	3				2																																																																		51
CCG/CGG	-	-	19	4		2																																																																						25
AAAC/GTTT	-	48	11	5	1	1	2	1																																																																				69
AAAG/CTTT	-	20	4	2																																																																								26
AAAT/ATTT	-	297	65	20	12		1		1	1																																																																		397
AACC/GGTT	-	4				1																																																																						5
AACG/CGTT	-	5																																																																										5
AACT/AGTT	-	4	1	1																																																																								6
AAGC/CTTG	-	2	1																																																																									3
AAGG/CCTT	-	3									1				1																																																													5
AAGT/ACTT	-	24	2																																																																									26
AATC/ATTG	-	10	1	2	2																																																																							15
AATG/ATTC	-	27	10	1									1																																																															39
AATT/AATT	-	28	4																																																																									32
ACAG/CTGT	-	43	8	6	2	2	2	1	1	4	3	1		1	2	2	1			1																																																								80
ACAT/ATGT	-	181	51	15	14	1	2	2	1		1							1																																																										269
ACCG/CGGT	-				1																																																																							1
ACCT/AGGT	-	93	9	1		1	1																																																																					105
ACGC/CGTG	-	2	1																																																																									3
ACGG/CCGT	-	4	1																																																																									5
ACGT/ACGT	-	3	3																																																																									6
ACTC/AGTG	-	8	2																																																																									10
ACTG/AGTC	-	35	21	6	4	1	3	1										1																																																										72
AGAT/ATCT	-	22	3	1			1																																																																					27
AGCC/CTGG	-									2	1				1																																																													4
AGCG/CGCT	-	1																																																																										1
AGCT/AGCT	-	2																																																																										2
AGGC/CCTG	-	1																																																																										1
AGGG/CCCT	-	1																																																																										1
ATCC/ATGG	-	35	4																																																																									39
CCCG/CGGG	-	1																																																																										1
CCGG/CCGG	-	1																																																																										1
AAAAC/GTTTT	94	3	1																																																																									98
AAAAG/CTTTT	68	3																																																																										71
AAAAT/ATTTT	369	15		1																																																																								385
AAACC/GGTTT	20																																																																											20
AAACG/CGTTT	16	1																																																																										17
AAACT/AGTTT	37	4																																																																										41
AAAGC/CTTTG	15	1																																																																										16
AAAGG/CCTTT	2																																																																											2
AAAGT/ACTTT	21																																																																											21
AAATC/ATTTG	84	18	1	1																																																																								104
AAATG/ATTTC	74	3	2	2																																																																								81
AAATT/AATTT	152	7	1																																																																									160
AACAC/GTGTT	45	2																																																																										47
AACAG/CTGTT	7	1																																																																										8
AACAT/ATGTT	27																																																																											27
AACCC/GGGTT	1																																																																											1
AACCG/CGGTT	2																																																																											2
AACCT/AGGTT	56	10	7	4	1	8	4	6	3	4	1		1																																																															105
AACGC/CGTTG	3																																																																											3
AACGG/CCGTT	4																																																																											4
AACGT/ACGTT	10																																																																											10
AACTC/AGTTG	13																																																																											13
AACTG/AGTTC	19	3																																																																										22
AACTT/AAGTT	7																																																																											7
AAGAC/CTTGT	12																																																																											12
AAGAG/CTCTT	12	1																																																																										13
AAGAT/ATCTT	12	4	1		1			1																																																																				19
AAGCC/CTTGG	4																																																																											4
AAGCG/CGCTT	5																																																																											5
AAGCT/AGCTT	7																																																																											7
AAGGC/CCTTG	2																																																																											2
AAGGG/CCCTT	1																																																																											1
AAGGT/ACCTT	16	1																																																																										17
AAGTC/ACTTG	15	3																																																																										18
AAGTG/ACTTC	22																																																																											22
AATAC/ATTGT	58	6	2																																																																									66
AATAG/ATTCT	28	3	1																																																																									32
AATAT/ATATT	92	5			1																																																																							98
AATCC/ATTGG	8	1																																																																										9
AATCG/ATTCG	17																																																																											17
AATCT/AGATT	17																																																																											17
AATGC/ATTGC	12																																																																											12
AATGG/ATTCC	33	11	10	1	2	4	1																																																																					62
AATGT/ACATT	43	3																																																																										46
AATTC/AATTG	34	6	2																																																																									42
ACACC/GGTGT	8	1																																																																										9
ACACG/CGTGT	15	1																																																																										16
ACACT/AGTGT	16	2																																																																										18
ACAGC/CTGTG	7	2																																																																										9
ACAGG/CCTGT	6	3	1	1			1					1																																																																13
ACAGT/ACTGT	13	2																																																																										15
ACATC/ATGTG	16																																																																											16
ACATG/ATGTC	59	4																																																																										63
ACCAG/CTGGT	1																																																																											1
ACCAT/ATGGT	8																																																																											8
ACCCC/GGGGT	2																																																																											2
ACCCG/CGGGT	3																																																																											3
ACCCT/AGGGT	6																																																																											6
ACCGC/CGGTG	6																																																																											6
ACCGG/CCGGT	1																																																																											1
ACCGT/ACGGT	7	1																																																																										8
ACCTC/AGGTG	3																																																																											3
ACCTG/AGGTC	3																																																																											3
ACGAG/CGTCT	6																																																																											6
ACGAT/ATCGT	17																																																																											17
ACGCC/CGTGG	3																																																																											3
ACGCG/CGCGT	9																																																																											9
ACGCT/AGCGT	4																																																																											4
ACGGC/CCGTG	1		1																																																																									2
ACGGG/CCCGT	1																																																																											1
ACGTC/ACGTG	16	2																																																																										18
ACTAG/AGTCT	7	1																																																																										8
ACTAT/AGTAT	20	1																																																																										21
ACTCC/AGTGG	3																																																																											3
ACTCG/AGTCG	6	1	1																																																																									8
ACTCT/AGAGT	4																																																																											4
ACTGC/AGTGC	7																																																																											7
ACTGG/AGTCC	4																																																																											4
AGAGC/CTCTG	3																																																																											3
AGAGG/CCTCT	12	1																																																																										13
AGATC/ATCTG	7																																																																											7
AGATG/ATCTC	11																																																																											11
AGCAT/ATGCT	9																																																																											9
AGCCC/CTGGG	2																																																																											2
AGCCG/CGGCT	3																																																																											3
AGCCT/AGGCT	2																																																																											2
AGCGC/CGCTG	3																																																																											3
AGCTC/AGCTG	2																																																																											2
AGGAT/ATCCT	10	1																																																																										11
AGGCC/CCTGG	3																																																																											3
AGGCG/CCTCG	4	1	1																																																																									6
AGGGG/CCCCT	9																																																																											9
ATATC/ATATG	5																																																																											5
ATCCC/ATGGG	3																																																																											3
ATCCG/ATCGG	1																																																																											1
ATCGC/ATGCG	3	1																																																																										4
ATGCC/ATGGC	6																																																																											6
CCCCG/CGGGG	5																																																																											5
CCGCG/CGCGG	28	3																																																																										31
AAAAAC/GTTTTT	5																																																																											5
AAAAAG/CTTTTT	9																																																																											9
AAAAAT/ATTTTT	43																																																																											43
AAAACG/CGTTTT	1																																																																											1
AAAAGC/CTTTTG	1																																																																											1
AAAATC/ATTTTG	36	11	4	1																																																																								52
AAAATG/ATTTTC	14	1																																																																										15
AAAATT/AATTTT	9																																																																											9
AAACAC/GTGTTT	1																																																																											1
AAACAT/ATGTTT	1																																																																											1
AAACCG/CGGTTT	5	2																																																																										7
AAACCT/AGGTTT	3					1	2																																																																					6
AAACTC/AGTTTG	5	2																																																																										7
AAACTG/AGTTTC	1																																																																											1
AAACTT/AAGTTT	2																																																																											2
AAAGAG/CTCTTT	2																																																																											2
AAAGAT/ATCTTT	3																																																																											3
AAAGCT/AGCTTT	2																																																																											2
AAAGGC/CCTTTG	1																																																																											1
AAAGTC/ACTTTG	10	1																																																																										11
AAAGTG/ACTTTC	1																																																																											1
AAAGTT/AACTTT	3																																																																											3
AAATAC/ATTTGT	3	2																																																																										5
AAATAG/ATTTCT	1																																																																											1
AAATAT/ATATTT	9	1																																																																										10
AAATCT/AGATTT	1																																																																											1
AAATGC/ATTTGC	1																																																																											1
AAATGT/ACATTT	3																																																																											3
AAATTC/AATTTG	17	4	2																																																																									23
AAATTG/AATTTC	4																																																																											4
AAATTT/AAATTT	3																																																																											3
AACAAG/CTTGTT	2																																																																											2
AACACC/GGTGTT	3																																																																											3
AACACT/AGTGTT	1																																																																											1
AACAGC/CTGTTG	2																																																																											2
AACATC/ATGTTG	2																																																																											2
AACATG/ATGTTC	2	1																																																																										3
AACATT/AATGTT	1																																																																											1
AACCAG/CTGGTT	1																																																																											1
AACCAT/ATGGTT	1																																																																											1
AACCGG/CCGGTT	1																																																																											1
AACCTG/AGGTTC		1	1																																																																									2
AACGGC/CCGTTG	1																																																																											1
AACGGG/CCCGTT	1																																																																											1
AACGTC/ACGTTG	4																																																																											4
AACTAC/AGTTGT	1																																																																											1
AACTAT/AGTTAT	1	1																																																																										2
AACTTG/AAGTTC	1																																																																											1
AAGAAT/ATTCTT	2																																																																											2
AAGACC/CTTGGT	2																																																																											2
AAGACG/CGTCTT	1																																																																											1
AAGAGT/ACTCTT	1																																																																											1
AAGATC/ATCTTG	2																																																																											2
AAGATG/ATCTTC	1																																																																											1
AAGATT/AATCTT	2																																																																											2
AAGCCG/CGGCTT	1																																																																											1
AAGCTG/AGCTTC		1																																																																										1
AAGGAT/ATCCTT	1																																																																											1
AAGGGC/CCCTTG	1	1																																																																										2
AAGGTC/ACCTTG	2																																																																											2
AAGTAT/ACTTAT	1																																																																											1
AATACC/ATTGGT	2																																																																											2
AATACT/AGTATT	1	1																																																																										2
AATAGC/ATTGCT	1	1																																																																										2
AATAGT/ACTATT	3																																																																											3
AATATG/ATATTC	2	1																																																																										3
AATATT/AATATT	4																																																																											4
AATCAC/ATTGTG	2																																																																											2
AATCAG/ATTCTG	3																																																																											3
AATCAT/ATGATT	1		1																																																																									2
AATCGC/ATTGCG	1																																																																											1
AATCGT/ACGATT	1																																																																											1
AATCTC/AGATTG	1																																																																											1
AATCTG/AGATTC	1																																																																											1
AATGAC/ATTGTC	14	2																																																																										16
AATGAT/ATCATT	3																																																																											3
AATGCG/ATTCGC	1																																																																											1
AATGTC/ACATTG	20	1																																																																										21
AATGTG/ACATTC	1																																																																											1
AATTAC/AATTGT	2	1																																																																										3
AATTAT/AATTAT	6																																																																											6
AATTCC/AATTGG	1																																																																											1
ACACAT/ATGTGT	2	1																																																																										3
ACACCC/GGGTGT	1																																																																											1
ACACCT/AGGTGT	1																																																																											1
ACACGC/CGTGTG	1		1																																																																									2
ACACGT/ACGTGT	1																																																																											1
ACACTC/AGTGTG	2																																																																											2
ACACTG/AGTGTC	12	1																																																																										13
ACAGGT/ACCTGT	1																																																																											1
ACAGTG/ACTGTC	18																																																																											18
ACATAG/ATGTCT	2																																																																											2
ACATAT/ATATGT	2	1																																																																										3
ACCACT/AGTGGT	1																																																																											1
ACCATC/ATGGTG	1																																																																											1
ACCCCC/GGGGGT	1																																																																											1
ACCCGC/CGGGTG	1																																																																											1
ACCGCT/AGCGGT	1																																																																											1
ACCGGG/CCCGGT		1																																																																										1
ACCTAG/AGGTCT	1																																																																											1
ACCTAT/AGGTAT	4																																																																											4
ACCTCT/AGAGGT	1																																																																											1
ACCTGC/AGGTGC	2																																																																											2
ACGACT/AGTCGT	1																																																																											1
ACGAGG/CCTCGT		1																																																																										1
ACGATG/ATCGTC	6																																																																											6
ACGCCC/CGTGGG	2																																																																											2
ACGCCT/AGGCGT	1																																																																											1
ACGGCC/CCGTGG	1																																																																											1
ACGTAT/ACGTAT	1																																																																											1
ACTAGG/AGTCCT	1																																																																											1
ACTATC/AGTGAT	2																																																																											2
ACTCGC/AGTGCG	1																																																																											1
ACTCTC/AGAGTG	1																																																																											1
ACTCTG/AGAGTC	2	1																																																																										3
ACTGCT/AGCAGT	1																																																																											1
AGAGAT/ATCTCT	2																																																																											2
AGAGGC/CCTCTG	1																																																																											1
AGATAT/ATATCT	6																																																																											6
AGATCC/ATCTGG		1																																																																										1
AGATCT/AGATCT	1																																																																											1
AGCATG/ATGCTC	1																																																																											1
AGCCGC/CGGCTG	1	1																																																																										2
AGCCTC/AGGCTG	1																																																																											1
AGCGGG/CCCGCT	1																																																																											1
AGCTCC/AGCTGG				1																																																																								1
AGGATC/ATCCTG	1	1		1																																																																								3
AGGCAT/ATGCCT	1																																																																											1
AGGGGG/CCCCCT	2																																																																											2
ATATCG/ATATCG	1																																																																											1
ATCGGC/ATGCCG	1																																																																											1
