Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018230805.1/fasta/hub_GCA_018230805.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              430379
Total size of examined sequences (bp):           185843961
Total number of identified SSRs:                 33731
Number of SSR containing sequences:              31063
Number of sequences containing more than 1 SSR:  2229
Number of SSRs present in compound formation:    1763


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	577
2	4534
3	9012
4	8746
5	8930
6	1932

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	11	10	11	5	5	3	1	1	3	3	2		1	4			2	3		1	1								3	2	1	1											1				2			1	1			1		2						97
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	8	12	16	10	12	9	5	13	7	7	6	3	3	4	4		1	3	5	2	3	2	1	2	1		1	1				1	1					1		1	1														1	1						157
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	16	13	15	16	23	7	13	8	6	6	8	5	13	2	4	7	3	5	1	3	1	5	2	1	3	4	1			2	2	1		1		1					1													2			2						203
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	23	16	9	14	11	2	5	4	1	4	1	1	1	2	1		1	1	1					1	1	1	2		1	2	1	2	1					1		1			1	1									2		1	1		1				1	120
AC	-	-	-	207	111	73	49	16	13	11	7	2	6	1		1	3	1		1		1				2		1																																																				506
AG	-	-	-	125	65	25	20	7	5	2	5	1						1									1									1																																												258
AT	-	-	-	370	145	94	81	38	31	15	10	9	1	2	1					1																																																												798
CA	-	-	-	151	80	49	32	22	6	7	8	6	5	6	1	2		1		1		2	1	3	1	1		1	4	2		2	2			1																																												397
CG	-	-	-	7	3	1																																																																										11
CT	-	-	-	90	48	13	9	7	3	3	3			3		1							1																																																									181
GA	-	-	-	64	27	22	9	4	4	2		1	1							1	1	1	1	1																																																								139
GC	-	-	-	17	3	3	2																																																																									25
GT	-	-	-	187	89	74	37	34	15	12	7	5	2		2	3	2	4	1		2	2	1	3							2	1				3																																												488
TA	-	-	-	429	154	79	54	37	20	9	11	8	3	3		3		1					1																																																									812
TC	-	-	-	142	50	44	32	8	6	4	5	1	2	1															1																																																			296
TG	-	-	-	264	109	68	48	40	16	19	11	11	3	5	5	3	3		3	1	2	1	2	1			1	2	1		1				2	1																																												623
AAC	-	-	5	2																																																																												7
AAG	-	-	35	10	1	1	1																																																																									48
AAT	-	-	351	100	32	5	1																																																																									489
ACA	-	-	12	6	1	1	1																																																																									21
ACC	-	-	3	3																																																																												6
ACG	-	-	4																																																																													4
ACT	-	-	8	2	1	1																																																																										12
AGA	-	-	16	12	2																																																																											30
AGC	-	-	7		1	1																																																																										9
AGG	-	-	4																																																																													4
AGT	-	-	17	5	2		1																																																																									25
ATA	-	-	418	116	36	15	2	1																																																																								588
ATC	-	-	447	277	165	57	23	10	6	3		1	1											1																																																								991
ATG	-	-	132	58	28	12	4	2	1		1	2		1	3	1																																																																245
ATT	-	-	277	106	22	8																																																																										413
CAA	-	-	13	2	2																																																																											17
CAC	-	-	8	3	2																																																																											13
CAG	-	-	8	4		2																																																																										14
CAT	-	-	125	76	36	14	4			1	1			1	1	1			1																																																													261
CCA	-	-	8																																																																													8
CCG	-	-	9	7																																																																												16
CCT	-	-	2																																																																													2
CGA	-	-	4																																																																													4
CGC	-	-	12	6	1																																																																											19
CGG	-	-	6	2	2	1				1																																																																						12
CGT	-	-	7	1																																																																												8
CTA	-	-	14	7	1	1																																																																										23
CTC	-	-	3	3																																																																												6
CTG	-	-	9	4		1											1																																																															15
CTT	-	-	29	6	3																																																																											38
GAA	-	-	20		3																																																																											23
GAC	-	-	2	3																																																																												5
GAG	-	-	5	3																																																																												8
GAT	-	-	98	57	23	13	5	4	1	1		1				1																																																																204
GCA	-	-	8	3	2	1																																																																										14
GCC	-	-	6	5																																																																												11
GCG	-	-	11	4			1	2																																																																								18
GCT	-	-	4	1		1					1				1																																																																	8
GGA	-	-	4	1			1																																																																									6
GGC	-	-	16	5	1																																																																											22
GGT	-	-	2	2	1																																																																											5
GTA	-	-	12	4	1									1																																																																		18
GTC	-	-	5	4		1	1					1																																																																				12
GTG	-	-	12																																																																													12
GTT	-	-	4	6	1			1																																																																								12
TAA	-	-	292	114	23	6	1				1																																																																					437
TAC	-	-	23	6		2	1																																																																									32
TAG	-	-	22	6	4																																																																											32
TAT	-	-	428	91	41	7	1	1			1																																																																					570
TCA	-	-	554	440	216	86	42	7	5	2	3			1				1	1	1																																																												1359
TCC	-	-	4																																																																													4
TCG	-	-	5	4	1	1		1																																																																								12
TCT	-	-	26	7	4															1																																																												38
TGA	-	-	908	688	338	146	52	12	10	6	4	2		1			1	1																																																														2169
TGC	-	-	9	4	2																																																																											15
TGG	-	-	5	2																																																																												7
TGT	-	-	10	2	5	1										1																																																																19
TTA	-	-	333	148	34	10	2		1																																																																							528
TTC	-	-	40	6	1			1				1																																																																				49
TTG	-	-	11	2			1		1																																																																							15
AAAC	-	44	8	1																																																																												53
AAAG	-	19	6	1	2	1																																																																										29
AAAT	-	332	52	12	4		1	5	2			1	1		1																																																																	411
AACA	-	23	8	1																																																																												32
AACC	-	1																																																																														1
AACG	-	2																																																																														2
AACT	-	8																																																																														8
AAGA	-	14	5	1																																																																												20
AAGC	-	1																																																																														1
AAGG	-	7	1	1																																																																												9
AAGT	-	8	1	1																																																																												10
AATA	-	450	123	28	5		1	2	5	1	1		1	1		1																																																																619
AATC	-	11	3																																																																													14
AATG	-	26	17	5	1																																																																											49
AATT	-	47	4																																																																													51
ACAA	-	13	5			1																																																																										19
ACAG	-	60	22	8	4	3	2	1		1	1								1																																																													103
ACAT	-	76	13	1						1				1																																																																		92
ACCA	-	6	2		1																																																																											9
ACCG	-	1																																																																														1
ACCT	-	20	3	2																																																																												25
ACGA	-	2																																																																														2
ACGC	-	3		1																																																																												4
ACGG	-	1	1																																																																													2
ACGT	-	2																																																																														2
ACTA	-	1																																																																														1
ACTC	-	5	2			1																																																																										8
ACTG	-	5	3	1	1																																																																											10
ACTT	-	18	2	1	1																																																																											22
AGAA	-	18	2	2	2																																																																											24
AGAC	-	18	7	3				2			1																																																																					31
AGAT	-	21	8	2																																																																												31
AGCA	-	3																																																																														3
AGCG	-	1																																																																														1
AGCT	-	3																																																																														3
AGGA	-	2		1																																																																												3
AGGG	-	1																																																																														1
AGGT	-	49	3	1																																																																												53
AGTA	-	13		1																																																																												14
AGTC	-	5	3	1	1																																																																											10
AGTG	-	5	2	1																																																																												8
AGTT	-	7																																																																														7
ATAA	-	321	61	10	7	2	5	4	2			1	1				1																																																															415
ATAC	-	63	14	2	3	1		1																																																																								84
ATAG	-	31	11	5																																																																												47
ATCA	-	16	4	2		1		1																																																																								24
ATCC	-	32	5	2				1						1																																																																		41
ATCG	-	1																																																																														1
ATCT	-	15	6																																																																													21
ATGA	-	33	10	3		3								1																																																																		50
ATGC	-	3																																																																														3
ATGG	-	10	2	1	1							1					1																																																															16
ATGT	-	35	6	2																																																																												43
ATTA	-	43	5			1																																																																										49
ATTC	-	49	20	6	1			1																																																																								77
ATTG	-	16	4	1		2																																																																										23
ATTT	-	270	46	4	1			1						1			1																																																															324
CAAA	-	68	7	3																																																																												78
CAAC	-	1																																																																														1
CAAG	-	3																																																																														3
CAAT	-	4																																																																														4
CACG	-	6	4		2																																																																											12
CACT	-	4	1		1																																																																											6
CAGA	-	12	5	1			1		1																																																																							20
CAGC	-	1																																																																														1
CAGG	-	1																																																																														1
CAGT	-	10	4	4																																																																												18
CATA	-	50	8	2	2	1																																																																										63
CATC	-	35	5	1	1							1					1																																																															44
CATG	-	3																																																																														3
CATT	-	18	4	2	1	1																																																																										26
CCAA	-	1																																																																														1
CCAG	-	3																																																																														3
CCAT	-	11	5																																																																													16
CCGT	-	3	2																																																																													5
CCTA	-	27	6		1																																																																											34
CCTC	-	1																																																																														1
CCTT	-	3		1																																																																												4
CGAA	-	2	1																																																																													3
CGAC	-	1																																																																														1
CGAG	-	1																																																																														1
CGCA	-	2	1									1																																																																				4
CGCC	-	1																																																																														1
CGCT	-	1																																																																														1
CGGA	-			1																																																																												1
CGGG	-	1																																																																														1
CGTA	-	2	1																																																																													3
CGTC	-	6	3																																																																													9
CGTG	-	3	1		1																																																																											5
CGTT	-		1	1																																																																												2
CTAA	-	5																																																																														5
CTAC	-	55	7	1	1																																																																											64
CTAG	-	4																																																																														4
CTAT	-	11	1																																																																													12
CTCA	-	2	4	1	1			1																																																																								9
CTCC	-	1																																																																														1
CTGA	-	6	3	1	1																																																																											11
CTGT	-	13	5	4			1										1																																																															24
CTTA	-	12	1																																																																													13
CTTC	-	7	2																																																																													9
CTTG	-	3	1																																																																													4
CTTT	-	8	1	1	1																																																																											11
GAAA	-	17	7	4		1						1																																																																				30
GAAC	-	2	1																																																																													3
GAAG	-	4	1																																																																													5
GAAT	-	19	5	2	1	1																																																																										28
GACA	-	19	5	1	1	1		1	1			1																																																																				30
GACG	-	8	1																																																																													9
GACT	-	4	3							1																																																																						8
GAGC	-	2																																																																														2
GAGT	-	4	2	1						1																																																																						8
GATA	-	10	5	1	2																																																																											18
GATC	-	2	1																																																																													3
GATG	-	96	32	8	3						2																																																																					141
GATT	-	15	3		1																																																																											19
GCAA	-	2																																																																														2
GCAC	-	2																																																																														2
GCAT	-	3																																																																														3
GCCT	-	2																																																																														2
GCGT	-	1	2																																																																													3
GCTA	-	1																																																																														1
GCTC	-		1	1																																																																												2
GCTG	-	1																																																																														1
GGAA	-	1																																																																														1
GGAC	-	2	1		1																																																																											4
GGAG	-	2																																																																														2
GGAT	-	6	1	1												1																																																																9
GGCG	-	2																																																																														2
GGGA	-	1																																																																														1
GGTA	-	47	2	2																																																																												51
GGTT	-	1																																																																														1
GTAA	-	10																																																																														10
GTAC	-	9	2																																																																													11
GTAG	-	103	15	2																																																																												120
GTAT	-	31	6	3	1																																																																											41
GTCA	-	28	12		2		3			1																																																																						46
GTCC	-	6	1																																																																													7
GTCG	-	2																																																																														2
GTCT	-	17	6	3	3	1			1					1																																																																		32
GTGA	-	7	2	1	2																																																																											12
GTGC	-	14	2	2	2	1	1				1																																																																					23
GTGG	-		1																																																																													1
GTTA	-	5																																																																														5
GTTC	-	3																																																																														3
GTTG	-	6			1																																																																											7
GTTT	-	65	9	1																																																																												75
TAAA	-	502	109	29	6	8	4	8	3		1		1																																																																			671
TAAC	-	7		1																																																																												8
TAAG	-	26	2	1																																																																												29
TAAT	-	40	7	1		1																																																																										49
TACA	-	58	17	3																																																																												78
TACC	-	147	27	2			2	2																																																																								180
TACG	-	7																																																																														7
TACT	-	18	5																																																																													23
TAGA	-	19	4	2																																																																												25
TAGC	-	1																																																																														1
TAGG	-	94	16	4	1																																																																											115
TAGT	-	4																																																																														4
TATC	-	34	10	3			1																																																																									48
TATG	-	103	23	2	2		1																																																																									131
TATT	-	724	150	49	30	15	19	24	8	4	2	2	1																																																																			1028
TCAA	-	20	9	4	2																																																																											35
TCAC	-	9	1	1	2			1																																																																								14
TCAG	-	12	8	2	1	1	2																																																																									26
TCAT	-	29	7	2	1																																																																											39
TCCA	-	50	15	3			1																																																																									69
TCCG	-	3		1		1																																																																										5
TCCT	-	2																																																																														2
TCGA	-	1	1																																																																													2
TCGC	-	1																																																																														1
TCGG	-					1																																																																										1
TCGT	-	2																																																																														2
TCTA	-	18	6	1																																																																												25
TCTG	-	34	24	11	3	1	2	2		1	1																																																																					79
TCTT	-	14	4				1		1																																																																							20
TGAA	-	31	11	1	1	1											1																																																															46
TGAC	-	36	10	3		1			1																																																																							51
TGAG	-	1	3																																																																													4
TGAT	-	13	5	3																																																																												21
TGCA	-	3																																																																														3
TGCC	-		1																																																																													1
TGCG	-	4	1	1																																																																												6
TGGA	-	9	4	1	1												1																																																															16
TGGT	-	1	2																																																																													3
TGTA	-	41	7	2		1																																																																										51
TGTC	-	61	13	2	3		3	1	1			1			1																																																																	86
TGTT	-	26	10	1	1																																																																											38
TTAA	-	34	6		1																																																																											41
TTAC	-	25	3	1		1																																																																										30
TTAG	-	5	1																																																																													6
TTAT	-	340	55	6	3	2	1				1			1			1																																																															410
TTCA	-	44	16	4	1	4		1		1																																																																						71
TTCC	-	8	2	1																																																																												11
TTCG	-	4	1																																																																													5
TTCT	-	22	1	1				1																																																																								25
TTGA	-	12	1						1																																																																							14
TTGC	-	2																																																																														2
TTGG	-	1		1																																																																												2
TTGT	-	17	5	2																																																																												24
TTTA	-	446	106	21	7	4	3	2	4	1	1			1																																																																		596
TTTC	-	45	12	3			2						1																																																																			63
TTTG	-	46	7	1	1	1	1					1																																																																				58
AAAAC	20	1																																																																														21
AAAAG	15	3																																																																														18
AAAAT	175	8																																																																														183
AAACA	25																																																																															25
AAACC	4																																																																															4
AAACG	3																																																																															3
AAACT	15	1																																																																														16
AAAGA	14	2																																																																														16
AAAGC	7																																																																															7
AAAGG	2																																																																															2
AAAGT	16	2																																																																														18
AAATA	183	12																																																																														195
AAATC	46	3																																																																														49
AAATG	44	6																																																																														50
AAATT	100	5																																																																														105
AACAA	23																																																																															23
AACAC	7																																																																															7
AACAG	5																																																																															5
AACAT	6																																																																															6
AACCA	2																																																																															2
AACCC	1																																																																															1
AACCG	1																																																																															1
AACCT	19	2	1	3		1		1				1																																																																				28
AACGA	7																																																																															7
AACGC	2																																																																															2
AACGG	1																																																																															1
AACGT	1																																																																															1
AACTA	11																																																																															11
AACTC	6																																																																															6
AACTG	10	2	1																																																																													13
AACTT	10																																																																															10
AAGAA	7																																																																															7
AAGAC	2																																																																															2
AAGAG	3		1																																																																													4
AAGAT	12		1	1		1																																																																										15
AAGCA	3	2																																																																														5
AAGCC	1																																																																															1
AAGCG					1																																																																											1
AAGCT	5																																																																															5
AAGGA	3																																																																															3
AAGGC	1	1																																																																														2
AAGGG	2																																																																															2
AAGGT	7	3																																																																														10
AAGTA	13	3																																																																														16
AAGTC	13																																																																															13
AAGTG	5																																																																															5
AAGTT	7	3	1																																																																													11
AATAA	170	12																																																																														182
AATAC	20	2																																																																														22
AATAG	12	2																																																																														14
AATAT	42	2																																																																														44
AATCA	47	9																																																																														56
AATCC	4																																																																															4
AATCG	7																																																																															7
AATCT	12	1																																																																														13
AATGA	36	8			1			1																																																																								46
AATGC	1																																																																															1
AATGG	10																																																																															10
AATGT	26																																																																															26
AATTA	81	7																																																																														88
AATTC	25	2																																																																														27
AATTG	28	4																																																																														32
AATTT	87	5	1																																																																													93
ACAAA	15																																																																															15
ACAAC	11	1																																																																														12
ACAAG	6																																																																															6
ACAAT	16																																																																															16
ACACA	10																																																																															10
ACACC	3																																																																															3
ACACG	2																																																																															2
ACACT	6																																																																															6
ACAGA	5																																																																															5
ACAGC	3																																																																															3
ACAGT	8																																																																															8
ACATA	10	2																																																																														12
ACATC	4																																																																															4
ACATG	5	1																																																																														6
ACATT	13																																																																															13
ACCAA	1																																																																															1
ACCAC	1																																																																															1
ACCAG	4																																																																															4
ACCAT	5																																																																															5
ACCCA	1																																																																															1
ACCCC	1																																																																															1
ACCCT	1																																																																															1
ACCGA	1																																																																															1
ACCGC	1																																																																															1
ACCGT	2																																																																															2
ACCTA	30	1		2			1	1		2	1	3																																																																				41
ACCTC	1																																																																															1
ACCTG	1																																																																															1
ACCTT	7	1		1																																																																												9
ACGAA	1																																																																															1
ACGAC	2																																																																															2
ACGAG	1	1																																																																														2
ACGAT	5																																																																															5
ACGCA	1																																																																															1
ACGCC	1																																																																															1
ACGCG	2																																																																															2
ACGGT	1																																																																															1
ACGTA	10	1																																																																														11
ACGTC	9	1																																																																														10
ACGTG	2		1																																																																													3
ACGTT	2																																																																															2
ACTAA	9																																																																															9
ACTAC	6	1																																																																														7
ACTAG	10																																																																															10
ACTAT	12	1									1																																																																					14
ACTCA	3																																																																															3
ACTCC	3																																																																															3
ACTCG	1																																																																															1
ACTCT	4	1																																																																														5
ACTGA	9	3																																																																														12
ACTGC	2																																																																															2
ACTGT	6																																																																															6
ACTTA	7																																																																															7
ACTTC	2																																																																															2
ACTTG	7																																																																															7
ACTTT	9	2																																																																														11
AGAAA	4	1																																																																														5
AGAAC	5																																																																															5
AGAAG	5	2																																																																														7
AGAAT	11																																																																															11
AGACA	2	1																																																																														3
AGACC	1																																																																															1
AGACG	1																																																																															1
AGACT	2																																																																															2
AGAGA	10	1																																																																														11
AGAGG	2			1																																																																												3
AGAGT	3																																																																															3
AGATA	7	1																																																																														8
AGATC	3																																																																															3
AGATG	1																																																																															1
AGATT	11	2																																																																														13
AGCAA	2																																																																															2
AGCAC	1																																																																															1
AGCAG	1																																																																															1
AGCAT	1																																																																															1
AGCCC	1																																																																															1
AGCCT	2																																																																															2
AGCGA	1																																																																															1
AGCGG	1																																																																															1
AGCTA	5																																																																															5
AGCTC	2																																																																															2
AGCTG	6																																																																															6
AGCTT	1																																																																															1
AGGAC	2	1																																																																														3
AGGAG	2																																																																															2
AGGAT	5	1																																																																														6
AGGCA	4																																																																															4
AGGCG	1		1																																																																													2
AGGGG	1																																																																															1
AGGGT	1																																																																															1
AGGTA	8	5																																																																														13
AGGTC	1																																																																															1
AGGTG	1			1																																																																												2
AGGTT	22	5	1	2								1	2																																																																			33
AGTAA	8	1																																																																														9
AGTAC	5																																																																															5
AGTAG	6																																																																															6
AGTAT	13	1																																																																														14
AGTCA	3	1																																																																														4
AGTCC	1																																																																															1
AGTCT	4																																																																															4
AGTGA	2																																																																															2
AGTGG	4																																																																															4
AGTGT	9	1																																																																														10
AGTTA	1	1																																																																														2
AGTTC	3																																																																															3
AGTTG	3																																																																															3
AGTTT	11	2																																																																														13
ATAAA	105	3																																																																														108
ATAAC	12																																																																															12
ATAAG	29	7	2	1																																																																												39
ATAAT	69	5	1																																																																													75
ATACA	17	4																																																																														21
ATACC	7																																																																															7
ATACG	9																																																																															9
ATACT	5																																																																															5
ATAGA	8	1																																																																														9
ATAGC	4																																																																															4
ATAGG	3																																																																															3
ATAGT	8	2																																																																														10
ATATA	85	1																																																																														86
ATATC	8																																																																															8
ATATG	4																																																																															4
ATATT	58	3	1																																																																													62
ATCAA	53	9	7																																																																													69
ATCAC	9																																																																															9
ATCAG	6	1																																																																														7
ATCAT	3																																																																															3
ATCCA	4																																																																															4
ATCCC	3																																																																															3
ATCCT	7																																																																															7
ATCGA	4																																																																															4
ATCGC	2																																																																															2
ATCGG	1																																																																															1
ATCGT	5																																																																															5
ATCTA	9																																																																															9
ATCTC	7																																																																															7
ATCTG	7																																																																															7
ATCTT	24	5	2	1																																																																												32
ATGAA	26	2	1				1																																																																									30
ATGAC	14																																																																															14
ATGAG	5	1																																																																														6
ATGAT	9	2																																																																														11
ATGCA	4																																																																															4
ATGCC	1	1																																																																														2
ATGCG	1																																																																															1
ATGCT	6	1																																																																														7
ATGGA	3																																																																															3
ATGGG	1																																																																															1
ATGGT	7																																																																															7
ATGTA	23																																																																															23
ATGTC	6	1																																																																														7
ATGTG	5	2																																																																														7
ATGTT	10																																																																															10
ATTAA	61	4																																																																														65
ATTAC	19	1																																																																														20
ATTAG	5	1																																																																														6
ATTAT	52	5	2																																																																													59
ATTCA	26	4																																																																														30
ATTCC	4	1																																																																														5
ATTCG	4																																																																															4
ATTCT	11																																																																															11
ATTGA	17	1																																																																														18
ATTGC	4																																																																															4
ATTGG	6																																																																															6
ATTGT	26	3		1																																																																												30
ATTTA	77	5																																																																														82
ATTTC	52	4	1																																																																													57
ATTTG	27	6	1	1																																																																												35
ATTTT	166	6																																																																														172
CAAAA	20	1																																																																														21
CAAAC	1																																																																															1
CAAAG	2	1																																																																														3
CAAAT	18	6	2																																																																													26
CAACA	4																																																																															4
CAACT	2																																																																															2
CAAGA	4																																																																															4
CAAGC	2																																																																															2
CAAGG	2																																																																															2
CAAGT	2																																																																															2
CAATA	7	4																																																																														11
CAATC	1																																																																															1
CAATG	3																																																																															3
CAATT	13	1																																																																														14
CACAA	8																																																																															8
CACAC	2																																																																															2
CACAG	1	1																																																																														2
CACAT	2																																																																															2
CACCA	2	1																																																																														3
CACCG	4																																																																															4
CACCT	3	1																																																																														4
CACGA	1																																																																															1
CACGC	1																																																																															1
CACGG	3																																																																															3
CACGT	1																																																																															1
CACTA	4		2																																																																													6
CACTC	3	1																																																																														4
CACTG	3																																																																															3
CACTT	6																																																																															6
CAGAA	4																																																																															4
CAGAC	1																																																																															1
CAGAG	2																																																																															2
CAGAT	2																																																																															2
CAGCA	2																																																																															2
CAGCG	1																																																																															1
CAGCT	1	1	1																																																																													3
CAGGA	2																																																																															2
CAGGT	1	1																																																																														2
CAGTA	7	1																																																																														8
CAGTG	3																																																																															3
CAGTT	1																																																																															1
CATAA	4																																																																															4
CATAC		1																																																																														1
CATAG	5																																																																															5
CATAT	3																																																																															3
CATCA	2	1																																																																														3
CATCG	1																																																																															1
CATCT	4																																																																															4
CATGA	5																																																																															5
CATGG	2																																																																															2
CATGT	5	1																																																																														6
CATTA	7																																																																															7
CATTC	4																																																																															4
CATTG	3																																																																															3
CATTT	20	1																																																																														21
CCAAG	1	1																																																																														2
CCAAT	1																																																																															1
CCACC	1																																																																															1
CCACG	3																																																																															3
CCAGC	2																																																																															2
CCAGG	1																																																																															1
CCATA	3																																																																															3
CCATC	1																																																																															1
CCATG	5																																																																															5
CCATT	4																																																																															4
CCCAA	1																																																																															1
CCCAT	1																																																																															1
CCCCG	2																																																																															2
CCCCT	1																																																																															1
CCCGC	2																																																																															2
CCCTA	1																																																																															1
CCGCA	1																																																																															1
CCGCC	1																																																																															1
CCGCG	3																																																																															3
CCGGT	1																																																																															1
CCGTA	2																																																																															2
CCGTG	2																																																																															2
CCGTT	1																																																																															1
CCTAA	17	3			1	1	1	1	1	2		2																																																																				29
CCTAG	2																																																																															2
CCTAT	1																																																																															1
CCTCA	1																																																																															1
CCTCG		1																																																																														1
CCTCT	3																																																																															3
CCTGA	2																																																																															2
CCTGC	1																																																																															1
CCTGG	2																																																																															2
CCTTA	8	1																																																																														9
CCTTC	1																																																																															1
CCTTG	1																																																																															1
CGAAA	2																																																																															2
CGAAG	2																																																																															2
CGACA	1																																																																															1
CGACG	2	1																																																																														3
CGACT	1																																																																															1
CGAGA	1																																																																															1
CGAGG	3	1																																																																														4
CGAGT	1																																																																															1
CGATA	2																																																																															2
CGATG	1																																																																															1
CGATT	4																																																																															4
CGCAC	1																																																																															1
CGCAT	3																																																																															3
CGCCG	4																																																																															4
CGCGA	1																																																																															1
CGCGC	1																																																																															1
CGCGG	1																																																																															1
CGCTC	2																																																																															2
CGGAA	1																																																																															1
CGGCG	2																																																																															2
CGGTA	1																																																																															1
CGTAA	5	1																																																																														6
CGTAG	2																																																																															2
CGTAT	2																																																																															2
CGTCA	5																																																																															5
CGTCG	2																																																																															2
CGTGA	2																																																																															2
CGTGT	3																																																																															3
CGTTA	6	1																																																																														7
CGTTC	1																																																																															1
CGTTG	1																																																																															1
CGTTT	1																																																																															1
CTAAA	16	1																																																																														17
CTAAC	58	8		2				2		1			3																																																																			74
CTAAG	3	1																																																																														4
CTAAT	8																																																																															8
CTACA	9																																																																															9
CTACG	1																																																																															1
CTAGA	5	1																																																																														6
CTAGG	1																																																																															1
CTAGT	2																																																																															2
CTATA	11																																																																															11
CTATC	4																																																																															4
CTATG	3																																																																															3
CTATT	7	1																																																																														8
CTCAA	1																																																																															1
CTCAC	4																																																																															4
CTCAG	2																																																																															2
CTCAT	2																																																																															2
CTCCA	2																																																																															2
CTCCC	1																																																																															1
CTCCG	2																																																																															2
CTCCT	3																																																																															3
CTCGG	2																																																																															2
CTCTA	4																																																																															4
CTCTC	4	1																																																																														5
CTCTG	1																																																																															1
CTCTT	2																																																																															2
CTGAA	2																																																																															2
CTGAC	1																																																																															1
CTGAG	2																																																																															2
CTGAT	2																																																																															2
CTGCA	2																																																																															2
CTGCT	1	1																																																																														2
CTGGG	3																																																																															3
CTGGT	1																																																																															1
CTGTA	4	2																																																																														6
CTGTC	1																																																																															1
CTGTG	4																																																																															4
CTGTT	4																																																																															4
CTTAA	5																																																																															5
CTTAC	9																																																																															9
CTTAG	6	1																																																																														7
CTTAT	6	1																																																																														7
CTTCA	5	1																																																																														6
CTTCC	1																																																																															1
CTTCG	1																																																																															1
CTTCT	7																																																																															7
CTTGA	5	1																																																																														6
CTTGC	1	1																																																																														2
CTTGG	3																																																																															3
CTTGT	1																																																																															1
CTTTA	11																																																																															11
CTTTC	2																																																																															2
CTTTG	1																																																																															1
CTTTT	8	2																																																																														10
GAAAA	15																																																																															15
GAAAG	4																																																																															4
GAAAT	24	3																																																																														27
GAACA	1																																																																															1
GAACC	1																																																																															1
GAACT	4																																																																															4
GAAGA	5																																																																															5
GAAGG	4																																																																															4
GAAGT	2																																																																															2
GAATA	8	2																																																																														10
GAATC	2																																																																															2
GAATG	2																																																																															2
GAATT	9	2		1																																																																												12
GACAA	3																																																																															3
GACAC		1																																																																														1
GACAG	1																																																																															1
GACAT	3																																																																															3
GACGC	1																																																																															1
GACGT	3																																																																															3
GACTA	3																																																																															3
GACTC	2																																																																															2
GACTT	3																																																																															3
GAGAC	2																																																																															2
GAGAG	5																																																																															5
GAGAT	1																																																																															1
GAGCA	1																																																																															1
GAGCT	1																																																																															1
GAGGA	1																																																																															1
GAGGT	6	3																																																																														9
GAGTA	4																																																																															4
GAGTC	1																																																																															1
GAGTG	3																																																																															3
GAGTT	1																																																																															1
GATAA	10	1	2																																																																													13
GATAC	4	2																																																																														6
GATAG	3																																																																															3
GATAT	5																																																																															5
GATCA	2																																																																															2
GATCC	1																																																																															1
GATCT	1	1																																																																														2
GATGA	3																																																																															3
GATGG	1																																																																															1
GATGT	2																																																																															2
GATTA	7																																																																															7
GATTC	5																																																																															5
GATTG	4	1																																																																														5
GATTT	33																																																																															33
GCAAA	1																																																																															1
GCAAG	2																																																																															2
GCAAT	4																																																																															4
GCACA	2																																																																															2
GCACC	1																																																																															1
GCAGA	1																																																																															1
GCAGT	1	1																																																																														2
GCATA	2																																																																															2
GCATC	1	1																																																																														2
GCATG	1																																																																															1
GCATT	4																																																																															4
GCCAC	2																																																																															2
GCCAG		1																																																																														1
GCCAT	1																																																																															1
GCCCA	1																																																																															1
GCCGC	4																																																																															4
GCCGT	2																																																																															2
GCCTG			1																																																																													1
GCCTT	1																																																																															1
GCGAA	2																																																																															2
GCGAC	5																																																																															5
GCGAG	2																																																																															2
GCGCA	1																																																																															1
GCGCC	2																																																																															2
GCGCG	6																																																																															6
GCGGC	5																																																																															5
GCGGG	1																																																																															1
GCGGT	2																																																																															2
GCGTA	2																																																																															2
GCGTC		1																																																																														1
GCGTG	1																																																																															1
GCGTT	1																																																																															1
GCTAA	4	1																																																																														5
GCTAC	2																																																																															2
GCTAT	4																																																																															4
GCTCA	3	1																																																																														4
GCTCC					1																																																																											1
GCTCT	1																																																																															1
GCTGA	1																																																																															1
GCTGC	3																																																																															3
GCTTA	2																																																																															2
GCTTC	1																																																																															1
GCTTG	3																																																																															3
GCTTT	3																																																																															3
GGAAA	2																																																																															2
GGAAC	1																																																																															1
GGAAT	4																																																																															4
GGACA	2																																																																															2
GGACT	1																																																																															1
GGAGA	2																																																																															2
GGAGC	2																																																																															2
GGAGG	1																																																																															1
GGAGT	4	1																																																																														5
GGATC	1																																																																															1
GGATG	1																																																																															1
GGATT	2																																																																															2
GGCGC	1																																																																															1
GGCGG	1																																																																															1
GGCTA	1																																																																															1
GGCTG	1																																																																															1
GGCTT	2																																																																															2
GGGAA			1																																																																													1
GGGAC	1																																																																															1
GGGAG	1																																																																															1
GGGCG	1																																																																															1
GGGCT	1																																																																															1
GGGGA	2																																																																															2
GGGGC	1																																																																															1
GGTAA	2																																																																															2
GGTAC	2																																																																															2
GGTAG	2																																																																															2
GGTAT	1																																																																															1
GGTCA	1																																																																															1
GGTCT	1																																																																															1
GGTGA				1																																																																												1
GGTGC	2																																																																															2
GGTGT	1																																																																															1
GGTTA	38	4	3			2	1	5	2	3		1	7																																																																			66
GGTTT	1																																																																															1
GTAAA	8																																																																															8
GTAAC	8																																																																															8
GTAAG	8	1																																																																														9
GTAAT	24	1																																																																														25
GTACA	6	2	1																																																																													9
GTACC	2																																																																															2
GTACG	1																																																																															1
GTACT	8	1																																																																														9
GTAGC	1																																																																															1
GTAGG	2																																																																															2
GTAGT	6	2	1																																																																													9
GTATA	11	2																																																																														13
GTATC	1																																																																															1
GTATG	5																																																																															5
GTATT	7		1																																																																													8
GTCAA	6																																																																															6
GTCAC	1																																																																															1
GTCAG	1																																																																															1
GTCAT	6																																																																															6
GTCCA	4																																																																															4
GTCCC	1																																																																															1
GTCCG	1																																																																															1
GTCCT	1																																																																															1
GTCGC	1																																																																															1
GTCGG	1																																																																															1
GTCGT	3																																																																															3
GTCTA	5	1																																																																														6
GTCTC	1																																																																															1
GTCTG	1																																																																															1
GTCTT	1																																																																															1
GTGAA	3	1																																																																														4
GTGAC	7																																																																															7
GTGAG	10	2																																																																														12
GTGAT	4	1																																																																														5
GTGCA	3																																																																															3
GTGGA	1																																																																															1
GTGGC						1																																																																										1
GTGGG	2																																																																															2
GTGGT	1																																																																															1
GTGTA	9	1			1																																																																											11
GTGTC	4																																																																															4
GTGTG		1																																																																														1
GTGTT	6		1																																																																													7
GTTAA	7																																																																															7
GTTAC	4																																																																															4
GTTAG	59	10	1	2		1	1	1		2		1	2																																																																			80
GTTAT	5	3																																																																														8
GTTCA	12																																																																															12
GTTGA	7																																																																															7
GTTGC	1																																																																															1
GTTGT	5																																																																															5
GTTTA	10	1																																																																														11
GTTTC	4																																																																															4
GTTTG	4																																																																															4
GTTTT	10																																																																															10
TAAAA	170	5																																																																														175
TAAAC	7																																																																															7
TAAAG	12																																																																															12
TAAAT	64	6		1																																																																												71
TAACA	14																																																																															14
TAACC	39	7			1			1					1																																																																			49
TAACG	10	2																																																																														12
TAACT	8	1																																																																														9
TAAGA	16	11	7	1																																																																												35
TAAGC	3																																																																															3
TAAGG	21	1																																																																														22
TAAGT	6	1																																																																														7
TAATA	54	4																																																																														58
TAATC	5																																																																															5
TAATG	21	1																																																																														22
TAATT	63		2																																																																													65
TACAA	29	4																																																																														33
TACAC	3	1																																																																														4
TACAG	9	2		1																																																																												12
TACAT	24	1	1																																																																													26
TACCA	5	1	1																																																																													7
TACCG	3																																																																															3
TACCT	17																																																																															17
TACGA	8																																																																															8
TACGG	8	1																																																																														9
TACGT	5																																																																															5
TACTA	17	2																																																																														19
TACTC	4																																																																															4
TACTG	9																																																																															9
TACTT	11	1																																																																														12
TAGAA	4																																																																															4
TAGAC	4																																																																															4
TAGAG	1																																																																															1
TAGAT	6	1																																																																														7
TAGCA	4	1																																																																														5
TAGCC	1	1																																																																														2
TAGCG	3																																																																															3
TAGCT	4																																																																															4
TAGGA	7	1																																																																														8
TAGGC	3	1																																																																														4
TAGGG	1																																																																															1
TAGGT	46	6			1				1																																																																							54
TAGTA	15	3																																																																														18
TAGTC	7																																																																															7
TAGTG	6	3	1																																																																													10
TAGTT	14																																																																															14
TATAA	54	2																																																																														56
TATAC	17																																																																															17
TATAG	20	1	2																																																																													23
TATAT	65	4																																																																														69
TATCA	4																																																																															4
TATCC	4																																																																															4
TATCG	9																																																																															9
TATCT	13	2	1																																																																													16
TATGA	3	1																																																																														4
TATGC	3																																																																															3
TATGG	4	1																																																																														5
TATGT	10	1																																																																														11
TATTA	92	3	1																																																																													96
TATTC	16		1	1	1																																																																											19
TATTG	26	1	1		1																																																																											29
TATTT	138	9																																																																														147
TCAAA	52	24																																																																														76
TCAAC	2																																																																															2
TCAAG	7																																																																															7
TCAAT	17	2																																																																														19
TCACA	9	1																																																																														10
TCACC	2																																																																															2
TCACG	4																																																																															4
TCACT	4	1																																																																														5
TCAGA	4																																																																															4
TCAGC	2																																																																															2
TCAGG	3																																																																															3
TCAGT	3																																																																															3
TCATA	8																																																																															8
TCATC	2																																																																															2
TCATG	7																																																																															7
TCATT	13	1																																																																														14
TCCAA	1																																																																															1
TCCAC	3																																																																															3
TCCAG		1																																																																														1
TCCAT	3																																																																															3
TCCCA	2																																																																															2
TCCCT	1																																																																															1
TCCGT	2																																																																															2
TCCTA	6																																																																															6
TCCTC		1																																																																														1
TCCTG	1																																																																															1
TCCTT	1	2																																																																														3
TCGAA	2																																																																															2
TCGAC	1																																																																															1
TCGAG	4																																																																															4
TCGAT	1																																																																															1
TCGCA	2						1																																																																									3
TCGCG	2																																																																															2
TCGCT	1																																																																															1
TCGGA	1	1																																																																														2
TCGGG	1																																																																															1
TCGGT	1																																																																															1
TCGTA	6																																																																															6
TCGTC	1																																																																															1
TCGTG	5																																																																															5
TCTAA	14																																																																															14
TCTAC	1																																																																															1
TCTAG	5	1																																																																														6
TCTAT	11	1																																																																														12
TCTCA	3	1																																																																														4
TCTCC	1																																																																															1
TCTCG	2																																																																															2
TCTCT	5																																																																															5
TCTGA	2																																																																															2
TCTGG	1	1																																																																														2
TCTGT	4																																																																															4
TCTTA	15	5	1	1																																																																												22
TCTTC	6	1																																																																														7
TCTTG	2	1																																																																														3
TCTTT	8	1																																																																														9
TGAAA	31	10	2	2	1																																																																											46
TGAAC	3	1																																																																														4
TGAAG	9																																																																															9
TGAAT	18	4																																																																														22
TGACA	9																																																																															9
TGACC		1																																																																														1
TGACG	5																																																																															5
TGACT	3	1																																																																														4
TGAGG	2	2																																																																														4
TGAGT	1	1																																																																														2
TGATA	7																																																																															7
TGATC	3																																																																															3
TGATG	8	1																																																																														9
TGATT	24	1	1																																																																													26
TGCAA	4																																																																															4
TGCAG	1	1																																																																														2
TGCCA	1																																																																															1
TGCCG	1																																																																															1
TGCCT	2	1																																																																														3
TGCGA	3																																																																															3
TGCGT	1																																																																															1
TGCTA	3																																																																															3
TGCTG	1																																																																															1
TGCTT	1																																																																															1
TGGAA	6																																																																															6
TGGAC	2																																																																															2
TGGAG	1	1																																																																														2
TGGAT	2	1																																																																														3
TGGCA	1																																																																															1
TGGCG	2																																																																															2
TGGGA	1																																																																															1
TGGGC	1																																																																															1
TGGGG	1																																																																															1
TGGGT	1																																																																															1
TGGTA	4																																																																															4
TGGTG	1																																																																															1
TGGTT	1																																																																															1
TGTAA	18	1																																																																														19
TGTAC	4	1																																																																														5
TGTAG	5	2	1	1																																																																												9
TGTAT	20	1																																																																														21
TGTCA	11	1																																																																														12
TGTCC	2																																																																															2
TGTCG	3		1																																																																													4
TGTCT	3	1																																																																														4
TGTGA	7	1																																																																														8
TGTGC	6																																																																															6
TGTGG	2																																																																															2
TGTGT	3	2																																																																														5
TGTTA	15																																																																															15
TGTTC	3																																																																															3
TGTTG	6	1																																																																														7
TGTTT	16																																																																															16
TTAAA	85	7	2																																																																													94
TTAAC	8	2																																																																														10
TTAAG	8																																																																															8
TTAAT	60	2																																																																														62
TTACA	22	2																																																																														24
TTACC	8	1	1																																																																													10
TTACG	5	1																																																																														6
TTACT	19																																																																															19
TTAGA	11	1																																																																														12
TTAGC	5																																																																															5
TTAGG	34	5	2	1		1		1	1		2	1	3																																																																			51
TTAGT	11																																																																															11
TTATA	49	1																																																																														50
TTATC	13	3		1																																																																												17
TTATG	13	2																																																																														15
TTATT	135	9																																																																														144
TTCAA	23	2																																																																														25
TTCAC	7																																																																															7
TTCAG	9	1																																																																														10
TTCAT	24							1																																																																								25
TTCCA	7																																																																															7
TTCCC	2	1																																																																														3
TTCCG	1																																																																															1
TTCCT	4	1									1		1																																																																			7
TTCGA	7																																																																															7
TTCGG	1																																																																															1
TTCGT	3																																																																															3
TTCTA	11																																																																															11
TTCTC	2	1																																																																														3
TTCTG	5	2																																																																														7
TTCTT	19	1																																																																														20
TTGAA	20	4																																																																														24
TTGAC	11	2																																																																														13
TTGAG	3																																																																															3
TTGAT	26	2																																																																														28
TTGCA	6																																																																															6
TTGCT	1	1																																																																														2
TTGGA	3	1																																																																														4
TTGGT	4	1																																																																														5
TTGTA	28	1	1																																																																													30
TTGTC	5																																																																															5
TTGTG	15																																																																															15
TTGTT	9																																																																															9
TTTAA	111	5																																																																														116
TTTAC	20	3																																																																														23
TTTAG	19	2																																																																														21
TTTAT	170	11																																																																														181
TTTCA	74	25	9	1	1									1																																																																		111
TTTCC	6					1			1			1	2																																																																			11
TTTCG	2																																																																															2
TTTCT	15	2																																																																														17
TTTGA	141	56	3																																																																													200
TTTGC	5																																																																															5
TTTGG	6	1																																																																														7
TTTGT	14																																																																															14
TTTTA	245	12	1	1	1																																																																											260
TTTTC	28	2																																																																														30
TTTTG	22																																																																															22
AAAAAC	2																																																																															2
AAAAAG	1									1																																																																						2
AAAAAT	15																																																																															15
AAAACT	1																																																																															1
AAAAGA	1																																																																															1
AAAAGT	1																																																																															1
AAAATA	14																																																																															14
AAAATC	8	2																																																																														10
AAAATG	36	4				1																																																																										41
AAAATT	4																																																																															4
AAACAA	2																																																																															2
AAACCA	1																																																																															1
AAACGA	1																																																																															1
AAACTC	1																																																																															1
AAAGAA	2																																																																															2
AAAGCA	1																																																																															1
AAAGTA	2																																																																															2
AAAGTC	14	2																																																																														16
AAAGTT	1																																																																															1
AAATAA	9																																																																															9
AAATAC	1																																																																															1
AAATAT	2																																																																															2
AAATCA		1																																																																														1
AAATCC	1																																																																															1
AAATCT	1																																																																															1
AAATGA	9	1			1																																																																											11
AAATGG	1																																																																															1
AAATGT	1																																																																															1
AAATTA	6	1																																																																														7
AAATTC	3																																																																															3
AAATTG	1																																																																															1
AAATTT	4	1																																																																														5
AACAAA	1																																																																															1
AACATT	1																																																																															1
AACGAA		1																																																																														1
AACGTT	1																																																																															1
AACTGA	1																																																																															1
AACTTT	2																																																																															2
AAGAAA	1																																																																															1
AAGAAC	1																																																																															1
AAGACG	1																																																																															1
AAGAGA	1																																																																															1
AAGAGT	2																																																																															2
AAGATT	1																																																																															1
AAGCTT	1																																																																															1
AAGGGT	1	1																																																																														2
AAGGTT	1																																																																															1
AAGTAC	1																																																																															1
AAGTAT	1																																																																															1
AAGTCA	6																																																																															6
AAGTGT	1																																																																															1
AATAAA	12																																																																															12
AATAAC	2																																																																															2
AATACA	1																																																																															1
AATACT	1																																																																															1
AATAGG	1																																																																															1
AATAGT	2																																																																															2
AATATA	2																																																																															2
AATATG	1																																																																															1
AATATT	3																																																																															3
AATCAA	2																																																																															2
AATCAG	2	1																																																																														3
AATCAT	3																																																																															3
AATCCA	1																																																																															1
AATCGT	1																																																																															1
AATCTG	1																																																																															1
AATCTT	1																																																																															1
AATGAA	14			1																																																																												15
AATGAG	1																																																																															1
AATGTA	4																																																																															4
AATGTC	2																																																																															2
AATGTG	1																																																																															1
AATGTT	1																																																																															1
AATTAA	4																																																																															4
AATTAC	1																																																																															1
AATTAG	1																																																																															1
AATTAT	4																																																																															4
AATTCA	4																																																																															4
AATTCT	1																																																																															1
AATTGA		1																																																																														1
AATTGT	1																																																																															1
AATTTA	3																																																																															3
AATTTG	4																																																																															4
AATTTT	8																																																																															8
ACAAAA	1																																																																															1
ACAAAT	1																																																																															1
ACAAGT		1																																																																														1
ACAATA	1																																																																															1
ACAATG	1																																																																															1
ACACAA	1																																																																															1
ACACAG	1																																																																															1
ACACAT	2	1																																																																														3
ACACCA	1																																																																															1
ACACGC	1		1																																																																													2
ACAGAC		1																																																																														1
ACAGGT	1																																																																															1
ACAGTG	1																																																																															1
ACATAA	1																																																																															1
ACATAC	4																																																																															4
ACATAT	2																																																																															2
ACATCG	1																																																																															1
ACATGT	1																																																																															1
ACATTA	1																																																																															1
ACCAAA	1																																																																															1
ACCACA	1																																																																															1
ACCATA	1																																																																															1
ACCGAA	4																																																																															4
ACCGAG	1																																																																															1
ACCTAA	1																																																																															1
ACCTGG	1																																																																															1
ACCTTT	1																																																																															1
ACGAGA	1																																																																															1
ACGATG	1																																																																															1
ACGCAC	1																																																																															1
ACGCTC	1																																																																															1
ACGCTT	1																																																																															1
ACGTCA		1																																																																														1
ACGTCT	1																																																																															1
ACGTTG	1																																																																															1
ACGTTT	2																																																																															2
ACTACA	1																																																																															1
ACTATC	1																																																																															1
ACTCTT	2																																																																															2
ACTGAA	1																																																																															1
ACTGCG	1																																																																															1
ACTGTA		1																																																																														1
ACTGTC	1																																																																															1
ACTGTG	1																																																																															1
ACTTAA	1																																																																															1
ACTTAC	2																																																																															2
ACTTAT	1																																																																															1
ACTTCT	1																																																																															1
ACTTGT	1																																																																															1
ACTTTA	2																																																																															2
ACTTTG	1																																																																															1
ACTTTT	1																																																																															1
AGAAAA	2																																																																															2
AGAAAT	2																																																																															2
AGAATA	1																																																																															1
AGAATC	2																																																																															2
AGAATG									1																																																																							1
AGAGAT		1																																																																														1
AGAGCT	1																																																																															1
AGAGGA	1																																																																															1
AGATAA	1																																																																															1
AGATAC	1																																																																															1
AGATAG	1																																																																															1
AGATAT	2		1																																																																													3
AGATTC	1																																																																															1
AGATTT	1																																																																															1
AGCCAA	1																																																																															1
AGCCCT	1																																																																															1
AGCGAG	1																																																																															1
AGCGCG	1																																																																															1
AGCGGA	1																																																																															1
AGCTCT	1																																																																															1
AGCTTA	1																																																																															1
AGGAAT		1																																																																														1
AGGATG	1																																																																															1
AGGTAC	2																																																																															2
AGGTCT	1																																																																															1
AGTAAA	1																																																																															1
AGTAAG	1																																																																															1
AGTACG	1																																																																															1
AGTACT		1																																																																														1
AGTCAA	9																																																																															9
AGTCAT	1																																																																															1
AGTCCT	1																																																																															1
AGTCTA	1																																																																															1
AGTGGT	1																																																																															1
AGTTAA	1																																																																															1
AGTTAC	1																																																																															1
AGTTAT	2																																																																															2
AGTTCA	1																																																																															1
AGTTCG	1																																																																															1
AGTTGT	1																																																																															1
AGTTTC	1																																																																															1
ATAAAA	6																																																																															6
ATAAAT	3																																																																															3
ATAACT	1																																																																															1
ATAAGA	1																																																																															1
ATAAGG	1																																																																															1
ATAAGT	1																																																																															1
ATAATC	1																																																																															1
ATAATG	2																																																																															2
ATAATT	2																																																																															2
ATACAA	2																																																																															2
ATACAC	1																																																																															1
ATACAT	2																																																																															2
ATACCG	1																																																																															1
ATACCT	4																																																																															4
ATACGA	2																																																																															2
ATACGT	1																																																																															1
ATACTA	1																																																																															1
ATAGAA	5																																																																															5
ATAGAC	1																																																																															1
ATAGAT	4																																																																															4
ATAGCA	2																																																																															2
ATAGCT	1																																																																															1
ATAGGT	1																																																																															1
ATAGTA	1																																																																															1
ATATAA	5																																																																															5
ATATAC	1																																																																															1
ATATAG	1																																																																															1
ATATCC	3																																																																															3
ATATCG	1																																																																															1
ATATGA		1																																																																														1
ATATGT	1																																																																															1
ATATTA	4																																																																															4
ATATTC	3																																																																															3
ATATTT	7	1																																																																														8
ATCAAA	3																																																																															3
ATCAAG	1																																																																															1
ATCACT	1																																																																															1
ATCAGA	2																																																																															2
ATCATA	1																																																																															1
ATCCAG	1																																																																															1
ATCCGC	1																																																																															1
ATCCTA	1																																																																															1
ATCCTT	1																																																																															1
ATCGAT	1																																																																															1
ATCGCT	1																																																																															1
ATCTAT	20																																																																															20
ATCTCT	1																																																																															1
ATCTGA	1	1																																																																														2
ATCTTA	2																																																																															2
ATCTTT	2	1																																																																														3
ATGAAA	17	2	2																																																																													21
ATGAGA	1																																																																															1
ATGATT	1																																																																															1
ATGGAT	1																																																																															1
ATGTAA	2																																																																															2
ATGTAG	1																																																																															1
ATGTAT	1																																																																															1
ATGTCA	1																																																																															1
ATGTCG	1																																																																															1
ATGTCT	1																																																																															1
ATGTGT	1	1																																																																														2
ATGTTG	1																																																																															1
ATTAAA	6																																																																															6
ATTAAC	2																																																																															2
ATTAAG	2																																																																															2
ATTAAT	2																																																																															2
ATTACC	1																																																																															1
ATTACG	2																																																																															2
ATTAGA	2																																																																															2
ATTATA	2																																																																															2
ATTATC	2																																																																															2
ATTCAG	1																																																																															1
ATTCCC	1																																																																															1
ATTCCT	1																																																																															1
ATTCGA	2																																																																															2
ATTCGC		1																																																																														1
ATTCTA	1																																																																															1
ATTCTC	2					1																																																																										3
ATTCTG	4																																																																															4
ATTCTT	1																																																																															1
ATTGAA	1																																																																															1
ATTGAC	1																																																																															1
ATTGAT	1																																																																															1
ATTGCA	1																																																																															1
ATTGTA	3																																																																															3
ATTGTG	1																																																																															1
ATTTAA	2																																																																															2
ATTTAT	2																																																																															2
ATTTCA	1																																																																															1
ATTTGA	1																																																																															1
ATTTGT	1																																																																															1
ATTTTA	6																																																																															6
ATTTTC	12																																																																															12
ATTTTG	17	2																																																																														19
ATTTTT	16																																																																															16
CAAAAA	2																																																																															2
CAAAAT	4																																																																															4
CAAACG	1																																																																															1
CAAAGT	3	2																																																																														5
CAAATG	1																																																																															1
CAAATT	1																																																																															1
CAACAC	1	1																																																																														2
CAACAG	1																																																																															1
CAACCG	1																																																																															1
CAAGAA	1																																																																															1
CAAGAC	4	2																																																																														6
CAATGG	2																																																																															2
CAATTT	2																																																																															2
CACACG	1	1			1																																																																											3
CACACT	1																																																																															1
CACAGG	1																																																																															1
CACATT	1																																																																															1
CACCAA	2																																																																															2
CACCCG	1																																																																															1
CACCTC	1																																																																															1
CACCTT	1																																																																															1
CACGAC	1																																																																															1
CACGAG	1																																																																															1
CACGCA	2					1																																																																										3
CACGCC	1																																																																															1
CACGGT	1																																																																															1
CACTCA	3																																																																															3
CACTGT	1																																																																															1
CACTTG	2																																																																															2
CAGAAG	1																																																																															1
CAGAAT	1																																																																															1
CAGACG	1																																																																															1
CAGAGA									1																																																																							1
CAGAGG	1																																																																															1
CAGCAC	1																																																																															1
CAGCCG	2																																																																															2
CAGGAA	1																																																																															1
CAGGTA		1																																																																														1
CAGTAA	1																																																																															1
CAGTTA	1																																																																															1
CATAAT	1																																																																															1
CATATA	1																																																																															1
CATCAC		1																																																																														1
CATCCG	2																																																																															2
CATGGA	1																																																																															1
CATTAC	1																																																																															1
CATTAT	1																																																																															1
CATTCA	1																																																																															1
CATTCC		1																																																																														1
CATTCG		1																																																																														1
CATTGG	1																																																																															1
CATTGT	1																																																																															1
CATTTA	2																																																																															2
CATTTT	75	15	1																																																																													91
CCACAC	1	1																																																																														2
CCACCT	1																																																																															1
CCATTC	2																																																																															2
CCATTT	1					1																																																																										2
CCCCTT	1																																																																															1
CCCGCA	3																																																																															3
CCCGGT			1																																																																													1
CCCGTG	2																																																																															2
CCCTCT	1																																																																															1
CCGACG	1																																																																															1
CCGAGT	1																																																																															1
CCGATA	2																																																																															2
CCGCAA	1																																																																															1
CCGCAC	1																																																																															1
CCGCAT	1																																																																															1
CCGCCA	2																																																																															2
CCGCCC	2																																																																															2
CCGCCT	1																																																																															1
CCGCGA	1																																																																															1
CCGCTC	1																																																																															1
CCGTAT	1																																																																															1
CCTCCG	1	2																																																																														3
CCTCTC		1																																																																														1
CGAAAA	4																																																																															4
CGAAAC	1																																																																															1
CGACGT	1																																																																															1
CGAGCG	1																																																																															1
CGATGA	1																																																																															1
CGATGT	1																																																																															1
CGATTT	1																																																																															1
CGCACA	2	1																																																																														3
CGCAGC	1																																																																															1
CGCCCC	2																																																																															2
CGCCCT	1																																																																															1
CGCGAC	4																																																																															4
CGCTCG	1																																																																															1
CGGAGG	1																																																																															1
CGGAGT	1																																																																															1
CGGCAG	1																																																																															1
CGGCGA	1																																																																															1
CGGCGT	1																																																																															1
CGGTCG	2																																																																															2
CGGTGT	1																																																																															1
CGGTTA	1																																																																															1
CGTCGC	1																																																																															1
CGTCTT	1																																																																															1
CGTGAC		1																																																																														1
CGTTAT	1																																																																															1
CGTTCC	1																																																																															1
CGTTGT	1																																																																															1
CTAAAT	1																																																																															1
CTAATA	2																																																																															2
CTACCA	1																																																																															1
CTACTC	1																																																																															1
CTACTT	1																																																																															1
CTAGAA	1																																																																															1
CTAGAG	1																																																																															1
CTAGCT	1																																																																															1
CTATAA	1																																																																															1
CTATAC	1																																																																															1
CTATAT	1																																																																															1
CTATCA	2																																																																															2
CTATGT	1																																																																															1
CTATTC						1																																																																										1
CTATTT	1																																																																															1
CTCAAA		1																																																																														1
CTCACT		1																																																																														1
CTCATC	1																																																																															1
CTCCCC	1																																																																															1
CTCCCG	1																																																																															1
CTCGGG	1																																																																															1
CTCGTA	1																																																																															1
CTCTCC	1																																																																															1
CTCTTC	1																																																																															1
CTCTTG	1																																																																															1
CTGAAA	1																																																																															1
CTGACA	1																																																																															1
CTGAGT	1																																																																															1
CTGATG	1																																																																															1
CTGATT	4																																																																															4
CTGCGA	1																																																																															1
CTGCGC	1																																																																															1
CTGTAC	2																																																																															2
CTGTCA	1																																																																															1
CTGTGC	1																																																																															1
CTTAAA	1																																																																															1
CTTAAG	1																																																																															1
CTTAAT	1																																																																															1
CTTACT	1																																																																															1
CTTAGA	2																																																																															2
CTTCAA	2																																																																															2
CTTCAT	1																																																																															1
CTTCCA	1																																																																															1
CTTCGT	1																																																																															1
CTTCTA	1																																																																															1
CTTCTC	1																																																																															1
CTTTAA	2																																																																															2
CTTTGA	1																																																																															1
CTTTTT	1																																																																															1
GAAAAT	9	1																																																																														10
GAAATT	1																																																																															1
GAAGAT	1																																																																															1
GAAGGC	1																																																																															1
GAAGTG	1																																																																															1
GAATAT	6																																																																															6
GAATCT	1																																																																															1
GAATTT	2																																																																															2
GACAAG	1																																																																															1
GACACG	1																																																																															1
GACGTC	1																																																																															1
GACTGG		1																																																																														1
GAGACT	1																																																																															1
GAGCTA		1																																																																														1
GAGGAA	1	1																																																																														2
GAGGGG	1																																																																															1
GAGGGT	2																																																																															2
GAGTTA	1																																																																															1
GAGTTT	1																																																																															1
GATATT	1																																																																															1
GATGAC	1																																																																															1
GATGAG		1																																																																														1
GATGTC	1																																																																															1
GATTCT		1																																																																														1
GATTTT	1																																																																															1
GCAACG	1																																																																															1
GCACTA	1																																																																															1
GCCCAC	1	1																																																																														2
GCCCGC		1																																																																														1
GCCGCA	1																																																																															1
GCCGTC	1																																																																															1
GCCTCC		1																																																																														1
GCGAAT	2																																																																															2
GCGACA				1																																																																												1
GCGACC	1																																																																															1
GCGCCT	1																																																																															1
GCGCGG		1																																																																														1
GCGGAG		1																																																																														1
GCGGAT	1																																																																															1
GCGGCA	1																																																																															1
GCGGCT	3					1																																																																										4
GCGGGC	1																																																																															1
GCGGGG	1																																																																															1
GCGGGT	2	1																																																																														3
GCGTCG	1																																																																															1
GCGTGC	1																																																																															1
GCGTGT	3																																																																															3
GCTGCC	1																																																																															1
GCTGCG	7	1																																																																														8
GCTGGT	1																																																																															1
GCTGTT	1																																																																															1
GCTTGT	1																																																																															1
GCTTTA	2																																																																															2
GGAAAT	1																																																																															1
GGACCG		1																																																																														1
GGATAT	1																																																																															1
GGATGT	1																																																																															1
GGCGCA	2																																																																															2
GGCGGA	1		1																																																																													2
GGCGGG	2																																																																															2
GGCGTG	2																																																																															2
GGCTGC	3																																																																															3
GGGCGT	1																																																																															1
GGGGGA	1																																																																															1
GGGTGC	1																																																																															1
GGTAAA	1																																																																															1
GGTACT	1																																																																															1
GGTGCG	1	2																																																																														3
GGTGTC	1																																																																															1
GGTTAC	1																																																																															1
GGTTGA	1																																																																															1
GTAAAT	2																																																																															2
GTAAGT	1																																																																															1
GTACAA	1																																																																															1
GTACAC	1																																																																															1
GTACTC	1																																																																															1
GTACTG	1																																																																															1
GTAGTC	1																																																																															1
GTATAT	3																																																																															3
GTATCC	1																																																																															1
GTATCG	1	1																																																																														2
GTATTC	1																																																																															1
GTCAAA	11	1	1																																																																													13
GTCAAT	1																																																																															1
GTCAGT	1																																																																															1
GTCGAG	1																																																																															1
GTCGCC	2																																																																															2
GTCGCG	1																																																																															1
GTCGTA	1																																																																															1
GTCGTG	1	1																																																																														2
GTCTTG	3	1																																																																														4
GTCTTT	1																																																																															1
GTGACA	2																																																																															2
GTGCAC	1																																																																															1
GTGCGG	1																																																																															1
GTGCGT	1				1																																																																											2
GTGGCG		1																																																																														1
GTGGGC	1																																																																															1
GTGTAA	1																																																																															1
GTGTAC	1																																																																															1
GTGTAT	1	1																																																																														2
GTGTGA	1																																																																															1
GTGTGC	4	3																																																																														7
GTGTGG	1																																																																															1
GTGTTA	1																																																																															1
GTGTTT	1																																																																															1
GTTAAT	1																																																																															1
GTTATA	1																																																																															1
GTTCAA	1																																																																															1
GTTGAT	4																																																																															4
GTTGGT	1																																																																															1
GTTGTA	1																																																																															1
GTTGTC			1																																																																													1
GTTTAC	1																																																																															1
GTTTAT	1																																																																															1
GTTTCA	1																																																																															1
GTTTCG	2																																																																															2
GTTTCT	1																																																																															1
GTTTTA	1																																																																															1
GTTTTG	1																																																																															1
TAAAAA	17																																																																															17
TAAAAC	1																																																																															1
TAAAAT	3																																																																															3
TAAACA	1																																																																															1
TAAACT	1																																																																															1
TAAAGA	1	1																																																																														2
TAAAGG	3																																																																															3
TAAATA	3																																																																															3
TAAATG	1																																																																															1
TAAATT	5																																																																															5
TAACAG	1																																																																															1
TAACGA	1																																																																															1
TAACGG		1																																																																														1
TAAGAA	2																																																																															2
TAAGAG	1																																																																															1
TAAGTA						1																																																																										1
TAAGTG	4																																																																															4
TAATAG	1																																																																															1
TAATAT	4																																																																															4
TAATCA	1	1																																																																														2
TAATCG	1																																																																															1
TAATGG	1																																																																															1
TAATTA	5	1																																																																														6
TACAAA	1																																																																															1
TACACT	1																																																																															1
TACATA	1																																																																															1
TACATT	1																																																																															1
TACCGC	1																																																																															1
TACCTA	2																																																																															2
TACCTG	2																																																																															2
TACGAA	2																																																																															2
TACGAT	1																																																																															1
TACTCG	1																																																																															1
TACTGT	1																																																																															1
TACTTT	4																																																																															4
TAGAAC	1																																																																															1
TAGAAG	1																																																																															1
TAGAGC	1																																																																															1
TAGATA	1																																																																															1
TAGCAA	3																																																																															3
TAGCGG	1																																																																															1
TAGCTA	1																																																																															1
TAGCTC	1																																																																															1
TAGGAG	1																																																																															1
TAGGTA	2																																																																															2
TAGGTC					1																																																																											1
TAGTCA	1																																																																															1
TAGTGG	1																																																																															1
TAGTGT	2																																																																															2
TATAAA	3																																																																															3
TATAAC	1																																																																															1
TATAAG	1																																																																															1
TATAAT	6																																																																															6
TATACC	1																																																																															1
TATAGA	31	3																																																																														34
TATAGG	2																																																																															2
TATATT	4																																																																															4
TATCAA	1																																																																															1
TATCAT	1																																																																															1
TATCCG	2																																																																															2
TATCGG	2																																																																															2
TATCTA	11	1																																																																														12
TATGGC	1																																																																															1
TATGTA	2																																																																															2
TATGTG	2																																																																															2
TATGTT	1																																																																															1
TATTAA	2																																																																															2
TATTAC	1																																																																															1
TATTCT	2																																																																															2
TATTGA	2																																																																															2
TATTGT	1																																																																															1
TATTTA	8																																																																															8
TATTTC	2																																																																															2
TATTTG	1																																																																															1
TATTTT	15																																																																															15
TCAAAA	8	1	1																																																																													10
TCAAAG	7	1																																																																														8
TCAAAT	3																																																																															3
TCAACA	1																																																																															1
TCAAGA	1																																																																															1
TCAATC	1																																																																															1
TCACTA	2																																																																															2
TCACTC	2																																																																															2
TCACTG	1																																																																															1
TCAGAA	5																																																																															5
TCAGTC	1																																																																															1
TCATAT	1																																																																															1
TCATCG	3																																																																															3
TCATCT	2																																																																															2
TCATGA	1																																																																															1
TCATGT	1																																																																															1
TCATTC	1			1																																																																												2
TCATTG	2																																																																															2
TCATTT	3	2																																																																														5
TCCACC	1																																																																															1
TCCCAC	1																																																																															1
TCCGCA	1																																																																															1
TCCGCC	1																																																																															1
TCCTCA		1																																																																														1
TCCTCT	1																																																																															1
TCCTTC	1																																																																															1
TCGCCG	1																																																																															1
TCGCGG	1																																																																															1
TCGGTA		1																																																																														1
TCGTGC	1																																																																															1
TCTAAA	2																																																																															2
TCTAAC	1																																																																															1
TCTACT	1																																																																															1
TCTATA	8	2																																																																														10
TCTATC		1	1																																																																													2
TCTCAA	2																																																																															2
TCTCAT							1																																																																									1
TCTCCG	1																																																																															1
TCTCTA	2																																																																															2
TCTGGC	1																																																																															1
TCTGGT	1	1																																																																														2
TCTGTG	1																																																																															1
TCTTAA	1																																																																															1
TCTTAC	1																																																																															1
TCTTAG	1																																																																															1
TCTTAT	2																																																																															2
TCTTCA	2																																																																															2
TCTTCG	1																																																																															1
TCTTGC	1																																																																															1
TCTTTA	1																																																																															1
TCTTTT					1																																																																											1
TGAAAA	38	6				1	2			1	1																																																																					49
TGAAAT	1																																																																															1
TGAACG	1																																																																															1
TGAAGA	2																																																																															2
TGAATA		1																																																																														1
TGAATG	1																																																																															1
TGACAA	1																																																																															1
TGACAG	2																																																																															2
TGACCG	1																																																																															1
TGACGA	1																																																																															1
TGACTT	2																																																																															2
TGAGAA	2		1																																																																													3
TGAGCT	1																																																																															1
TGAGGA	2																																																																															2
TGAGTC	2																																																																															2
TGAGTT	1																																																																															1
TGATAG	1																																																																															1
TGATGC	1																																																																															1
TGATGG	2																																																																															2
TGATTA	2																																																																															2
TGATTC	4																																																																															4
TGATTT	4																																																																															4
TGCCAT	1																																																																															1
TGCGAG	1																																																																															1
TGCGCG	1																																																																															1
TGCGGC	1																																																																															1
TGCGGG	1																																																																															1
TGCGTC	1																																																																															1
TGCGTT	1																																																																															1
TGCTAT	1																																																																															1
TGGACT			1																																																																													1
TGGATA	1																																																																															1
TGGATC	1																																																																															1
TGGGCG		1																																																																														1
TGGTAG	1																																																																															1
TGGTCT	1																																																																															1
TGGTGC	1																																																																															1
TGGTTT	1																																																																															1
TGTAAA	1																																																																															1
TGTAAT	2																																																																															2
TGTAGG	1																																																																															1
TGTATA	2																																																																															2
TGTATT	2																																																																															2
TGTCAC	2																																																																															2
TGTCGC	1																																																																															1
TGTCTC	1																																																																															1
TGTGCG	2																																																																															2
TGTGGT	1																																																																															1
TGTGTA	7		1																																																																													8
TGTTAC	1																																																																															1
TGTTGA	2																																																																															2
TGTTGC	2																																																																															2
TGTTTT	1																																																																															1
TTAAAA	4																																																																															4
TTAAAC	1																																																																															1
TTAAAG		1																																																																														1
TTAAAT	3																																																																															3
TTAAGT	1																																																																															1
TTAATA	2																																																																															2
TTAATC	1																																																																															1
TTAATT	1																																																																															1
TTACAA	1																																																																															1
TTACAG	4																																																																															4
TTACCA	1																																																																															1
TTACCT	1																																																																															1
TTACGC	1																																																																															1
TTACGG	1																																																																															1
TTACTG	2																																																																															2
TTAGAA	2																																																																															2
TTAGAC	1																																																																															1
TTAGGC	1																																																																															1
TTAGTA	1																																																																															1
TTATAA	4																																																																															4
TTATAC				1																																																																												1
TTATAG	4	1																																																																														5
TTATAT	4																																																																															4
TTATCA	2																																																																															2
TTATTT	9	1																																																																														10
TTCAAA	6																																																																															6
TTCAAC	1																																																																															1
TTCAAT	3																																																																															3
TTCACA	2																																																																															2
TTCACG	2																																																																															2
TTCACT	1																																																																															1
TTCAGG	1																																																																															1
TTCAGT	1																																																																															1
TTCATA		1																																																																														1
TTCATC	1																																																																															1
TTCATT	1																																																																															1
TTCCAA	1																																																																															1
TTCCTA	2																																																																															2
TTCCTT	1																																																																															1
TTCGAT	1																																																																															1
TTCGGT	2																																																																															2
TTCGTT	2																																																																															2
TTCTAA	1																																																																															1
TTCTAT	1																																																																															1
TTCTCA	1						1																																																																									2
TTCTCG						1																																																																										1
TTCTCT	1																																																																															1
TTCTGA	1																																																																															1
TTCTGG	1																																																																															1
TTCTTA	3																																																																															3
TTCTTT	1																																																																															1
TTGAAA	2																																																																															2
TTGAAG	1																																																																															1
TTGACA	1																																																																															1
TTGATA	1																																																																															1
TTGATT	1																																																																															1
TTGCTA	3																																																																															3
TTGCTG	2																																																																															2
TTGGAA	1																																																																															1
TTGTAA	1																																																																															1
TTGTAT	1																																																																															1
TTGTCT	1																																																																															1
TTGTGT	2	1																																																																														3
TTGTTA	1																																																																															1
TTGTTT	1																																																																															1
TTTAAA	3																																																																															3
TTTAAG	1																																																																															1
TTTAAT	8																																																																															8
TTTACC	2																																																																															2
TTTACG	1	1																																																																														2
TTTACT	2																																																																															2
TTTAGA	1																																																																															1
TTTATA	5																																																																															5
TTTATT	15																																																																															15
TTTCAA	1																																																																															1
TTTCAC	1																																																																															1
TTTCAG	1																																																																															1
TTTCAT	8	1																																																																														9
TTTCGG	2																																																																															2
TTTCGT	1																																																																															1
TTTCTA	1																																																																															1
TTTCTC								1																																																																								1
TTTCTT	4	1																																																																														5
TTTGAA	3	1																																																																														4
TTTGAC	47	2				1																																																																										50
TTTGAG	6	1																																																																														7
TTTGAT	3																																																																															3
TTTGCT	1																																																																															1
TTTGGA		1																																																																														1
TTTGTC	1																																																																															1
TTTTAA	5																																																																															5
TTTTAC	1																																																																															1
TTTTAT	15																																																																															15
TTTTCA	16	2								1																																																																						19
TTTTCC	1																																																																															1
TTTTCG	3																																																																															3
TTTTCT	7																																																																															7
TTTTGA	5	2	2																																																																													9
TTTTGT	1																																																																															1
TTTTTA	21	2																																																																														23
TTTTTC	3	1																																																																														4
TTTTTG	5																																																																															5

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	38	27	19	25	16	7	8	5	2	7	4	3	1	3	5		1	3	4		1	1		1	1	1	2		1	5	3	3	2					1		1			1	2				2			1	1	2		2	1	2	1				1	217
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	25	21	27	32	33	19	22	13	19	13	15	11	16	5	8	11	3	6	4	8	3	8	4	2	5	5	1	1	1	2	2	1	1	2		1			1		2	1												2		1	3						360
AC/GT	-	-	-	809	389	264	166	112	50	49	33	24	16	12	8	9	8	6	4	3	4	6	4	7	1	3	1	4	5	2	3	3	2		2	5																																												2014
AG/CT	-	-	-	421	190	104	70	26	18	11	13	3	3	4		1		1		1	1	1	2	1			1		1							1																																												874
AT/AT	-	-	-	799	299	173	135	75	51	24	21	17	4	5	1	3		1		1			1																																																									1610
CG/CG	-	-	-	24	6	4	2																																																																									36
AAC/GTT	-	-	55	20	9	2	2	1	1							1																																																																91
AAG/CTT	-	-	166	41	14	1	1	1				1								1																																																												226
AAT/ATT	-	-	2099	675	188	51	7	2	1		2																																																																					3025
ACC/GGT	-	-	38	10	3																																																																											51
ACG/CGT	-	-	27	12	1	2	1	1				1																																																																				45
ACT/AGT	-	-	96	30	9	4	2							1																																																																		142
AGC/CTG	-	-	45	16	5	6					1				1		1																																																															75
AGG/CCT	-	-	22	7			1																																																																									30
ATC/ATG	-	-	2264	1596	806	328	130	35	23	13	9	6	1	4	4	3	1	2	2	1				1																																																								5229
CCG/CGG	-	-	60	29	4	1	1	2		1																																																																						98
AAAC/GTTT	-	302	59	10	2	2	1					1																																																																				377
AAAG/CTTT	-	157	38	13	5	2	3	1	1			1	1																																																																			222
AAAT/ATTT	-	3385	702	159	63	31	34	46	24	6	6	4	5	4	1	1	3																																																															4474
AACC/GGTT	-	18	4	1	2																																																																											25
AACG/CGTT	-	17	4	1																																																																												22
AACT/AGTT	-	42	1	1																																																																												44
AAGC/CTTG	-	14	1																																																																													15
AAGG/CCTT	-	34	6	4																																																																												44
AAGT/ACTT	-	130	14	5	1	1																																																																										151
AATC/ATTG	-	107	29	10	3	3		1	1																																																																							154
AATG/ATTC	-	249	90	25	7	10		2		1				1			1																																																															386
AATT/AATT	-	164	22	1	1	2																																																																										190
ACAG/CTGT	-	234	87	33	14	6	9	7	4	2	3	2		1	1		1		1																																																													405
ACAT/ATGT	-	457	94	17	8	3	1	1		1				1																																																																		583
ACCC/GGGT	-		1																																																																													1
ACCG/CGGT	-	4				1																																																																										5
ACCT/AGGT	-	542	79	14	3		2	2																																																																								642
ACGC/CGTG	-	35	11	4	5	1	1				1	1																																																																				59
ACGG/CCGT	-	29	9	2	1	1																																																																										42
ACGT/ACGT	-	20	3																																																																													23
ACTC/AGTG	-	37	17	5	6	1		2		1																																																																						69
ACTG/AGTC	-	106	46	12	6	2	5		1	2																																																																						180
AGAT/ATCT	-	159	51	14	2		1																																																																									227
AGCC/CTGG	-	5																																																																														5
AGCG/CGCT	-	6	1	1																																																																												8
AGCT/AGCT	-	9																																																																														9
AGGC/CCTG	-	3	1																																																																													4
AGGG/CCCT	-	6																																																																														6
ATCC/ATGG	-	249	69	17	6		1	1			2	2		1		1	3																																																															352
ATCG/ATCG	-	4	2																																																																													6
ATGC/ATGC	-	12																																																																														12
CCCG/CGGG	-	4																																																																														4
AAAAC/GTTTT	174	2																																																																														176
AAAAG/CTTTT	133	14																																																																														147
AAAAT/ATTTT	1657	87	1	1	1																																																																											1747
AAACC/GGTTT	24	2																																																																														26
AAACG/CGTTT	23																																																																															23
AAACT/AGTTT	123	7																																																																														130
AAAGC/CTTTG	26	4																																																																														30
AAAGG/CCTTT	24	3				1			1		1	1	3																																																																			34
AAAGT/ACTTT	127	12																																																																														139
AAATC/ATTTG	467	116	14	1																																																																												598
AAATG/ATTTC	344	60	13	3	3		1	2						1																																																																		427
AAATT/AATTT	789	46	5	1																																																																												841
AACAC/GTGTT	75	4	1																																																																													80
AACAG/CTGTT	36	2																																																																														38
AACAT/ATGTT	99	8																																																																														107
AACCC/GGGTT	4																																																																															4
AACCG/CGGTT	5																																																																															5
AACCT/AGGTT	362	51	8	12	3	6	4	13	5	10	3	10	18																																																																			505
AACGC/CGTTG	7																																																																															7
AACGG/CCGTT	8																																																																															8
AACGT/ACGTT	56	6																																																																														62
AACTC/AGTTG	29	1																																																																														30
AACTG/AGTTC	56	7	1																																																																													64
AACTT/AAGTT	67	8	1																																																																													76
AAGAC/CTTGT	29	3																																																																														32
AAGAG/CTCTT	45	5	1																																																																													51
AAGAT/ATCTT	145	36	16	6		1																																																																										204
AAGCC/CTTGG	12	1																																																																														13
AAGCG/CGCTT	8				1																																																																											9
AAGCT/AGCTT	38	3																																																																														41
AAGGC/CCTTG	14	3																																																																														17
AAGGG/CCCTT	11	1	1																																																																													13
AAGGT/ACCTT	95	13	1	1																																																																												110
AAGTC/ACTTG	60	5																																																																														65
AAGTG/ACTTC	45	3																																																																														48
AATAC/ATTGT	196	20	3	1	1																																																																											221
AATAG/ATTCT	99	7	1	1	1																																																																											109
AATAT/ATATT	620	30	5																																																																													655
AATCC/ATTGG	28	3																																																																														31
AATCG/ATTCG	36																																																																															36
AATCT/AGATT	88	6																																																																														94
AATGC/ATTGC	33																																																																															33
AATGG/ATTCC	47	1																																																																														48
AATGT/ACATT	197	7	1																																																																													205
AATTC/AATTG	196	26		1																																																																												223
ACACC/GGTGT	13	2																																																																														15
ACACG/CGTGT	24	1	1																																																																													26
ACACT/AGTGT	63	11	5	1	1																																																																											81
ACAGC/CTGTG	20	1																																																																														21
ACAGG/CCTGT	12	1																																																																														13
ACAGT/ACTGT	66	9	1	1																																																																												77
ACATC/ATGTG	52	7																																																																														59
ACATG/ATGTC	71	4																																																																														75
ACCAG/CTGGT	10	1																																																																														11
ACCAT/ATGGT	41	3	1																																																																													45
ACCCC/GGGGT	5																																																																															5
ACCCG/CGGGT	2																																																																															2
ACCCT/AGGGT	8																																																																															8
ACCGC/CGGTG	12																																																																															12
ACCGG/CCGGT	2																																																																															2
ACCGT/ACGGT	22	1																																																																														23
ACCTC/AGGTG	30	8		2																																																																												40
ACCTG/AGGTC	11	2																																																																														13
ACGAG/CGTCT	9	1																																																																														10
ACGAT/ATCGT	51	2																																																																														53
ACGCC/CGTGG	10					1																																																																										11
ACGCG/CGCGT	16	2																																																																														18
ACGCT/AGCGT	11																																																																															11
ACGGC/CCGTG	8																																																																															8
ACGGG/CCCGT	2																																																																															2
ACGTC/ACGTG	39	1	1																																																																													41
ACTAG/AGTCT	47	3																																																																														50
ACTAT/AGTAT	129	12	2								1																																																																					144
ACTCC/AGTGG	24	3																																																																														27
ACTCG/AGTCG	11																																																																															11
ACTCT/AGAGT	27	1																																																																														28
ACTGC/AGTGC	15	2																																																																														17
ACTGG/AGTCC	8	1																																																																														9
AGAGC/CTCTG	8	1																																																																														9
AGAGG/CCTCT	23	2		1																																																																												26
AGATC/ATCTG	32	2																																																																														34
AGATG/ATCTC	28	2																																																																														30
AGCAT/ATGCT	35	2																																																																														37
AGCCC/CTGGG	10																																																																															10
AGCCG/CGGCT	2																																																																															2
AGCCT/AGGCT	10	2																																																																														12
AGCGC/CGCTG	5																																																																															5
AGCGG/CCGCT	7				1																																																																											8
AGCTC/AGCTG	20	2	1																																																																													23
AGGAT/ATCCT	40	2																																																																														42
AGGCC/CCTGG	3	1	1																																																																													5
AGGCG/CCTCG	6	2	1																																																																													9
AGGGC/CCCTG	1																																																																															1
AGGGG/CCCCT	7																																																																															7
ATATC/ATATG	54	3																																																																														57
ATCCC/ATGGG	11																																																																															11
ATCCG/ATCGG	4	1																																																																														5
ATCGC/ATGCG	14	1					1																																																																									16
ATGCC/ATGGC	12	1																																																																														13
CCCCG/CGGGG	9																																																																															9
CCGCG/CGCGG	29																																																																															29
AAAAAC/GTTTTT	16																																																																															16
AAAAAG/CTTTTT	23	2			1					1																																																																						27
AAAAAT/ATTTTT	164	3																																																																														167
AAAACC/GGTTTT	4																																																																															4
AAAACG/CGTTTT	11	1																																																																														12
AAAACT/AGTTTT	3																																																																															3
AAAAGC/CTTTTG	2																																																																															2
AAAAGG/CCTTTT	2																																																																															2
AAAAGT/ACTTTT	12																																																																															12
AAAATC/ATTTTG	56	8	3																																																																													67
AAAATG/ATTTTC	238	34	3	1	1	2	2			2	1																																																																					284
AAAATT/AATTTT	55	1																																																																														56
AAACAC/GTGTTT	4	1																																																																														5
AAACAG/CTGTTT	1																																																																															1
AAACAT/ATGTTT	4																																																																															4
AAACCG/CGGTTT	11																																																																															11
AAACCT/AGGTTT	1																																																																															1
AAACGC/CGTTTG	2																																																																															2
AAACGT/ACGTTT	4	1																																																																														5
AAACTC/AGTTTG	9	2																																																																														11
AAACTG/AGTTTC	7																																																																															7
AAACTT/AAGTTT	6																																																																															6
AAAGAC/CTTTGT	3																																																																															3
AAAGAG/CTCTTT	2							1																																																																								3
AAAGAT/ATCTTT	5	2																																																																														7
AAAGCC/CTTTGG	1																																																																															1
AAAGCT/AGCTTT	2																																																																															2
AAAGGT/ACCTTT	8																																																																															8
AAAGTC/ACTTTG	101	8	1			1																																																																										111
AAAGTG/ACTTTC	2																																																																															2
AAAGTT/AACTTT	8	1																																																																														9
AAATAC/ATTTGT	11																																																																															11
AAATAG/ATTTCT	12																																																																															12
AAATAT/ATATTT	48	1																																																																														49
AAATCC/ATTTGG	2	1																																																																														3
AAATCG/ATTTCG	2																																																																															2
AAATCT/AGATTT	6																																																																															6
AAATGC/ATTTGC	1																																																																															1
AAATGG/ATTTCC	3					1																																																																										4
AAATGT/ACATTT	14																																																																															14
AAATTC/AATTTG	27	1																																																																														28
AAATTG/AATTTC	13	1																																																																														14
AAATTT/AAATTT	20	1																																																																														21
AACAAG/CTTGTT	2																																																																															2
AACAAT/ATTGTT	5																																																																															5
AACACC/GGTGTT	5	1																																																																														6
AACACT/AGTGTT	3																																																																															3
AACAGC/CTGTTG	6																																																																															6
AACAGG/CCTGTT	1																																																																															1
AACAGT/ACTGTT	6																																																																															6
AACATC/ATGTTG	8																																																																															8
AACATG/ATGTTC	1																																																																															1
AACATT/AATGTT	6																																																																															6
AACCAC/GGTTGT	2																																																																															2
AACCAG/CTGGTT	2	1																																																																														3
AACCAT/ATGGTT	1																																																																															1
AACCGC/CGGTTG	2																																																																															2
AACCGT/ACGGTT	3																																																																															3
AACCTC/AGGTTG	1																																																																															1
AACCTG/AGGTTC	1																																																																															1
AACCTT/AAGGTT	1																																																																															1
AACGAC/CGTTGT	1		1																																																																													2
AACGAG/CGTTCT	1					1																																																																										2
AACGAT/ATCGTT	2																																																																															2
AACGGC/CCGTTG	1																																																																															1
AACGGG/CCCGTT	1																																																																															1
AACGGT/ACCGTT		1																																																																														1
AACGTC/ACGTTG	1	1																																																																														2
AACGTG/ACGTTC	3																																																																															3
AACGTT/AACGTT	1																																																																															1
AACTAC/AGTTGT	3																																																																															3
AACTAG/AGTTCT	2																																																																															2
AACTAT/AGTTAT	10	1																																																																														11
AACTCG/AGTTCG	1																																																																															1
AACTCT/AGAGTT	2																																																																															2
AACTGT/ACAGTT	6	1																																																																														7
AACTTC/AAGTTG	4																																																																															4
AACTTG/AAGTTC	2																																																																															2
AAGAAT/ATTCTT	12																																																																															12
AAGACC/CTTGGT	8	3																																																																														11
AAGACG/CGTCTT	4																																																																															4
AAGACT/AGTCTT	1																																																																															1
AAGAGC/CTCTTG	2																																																																															2
AAGAGG/CCTCTT	4	1																																																																														5
AAGAGT/ACTCTT	8																																																																															8
AAGATC/ATCTTG	2																																																																															2
AAGATG/ATCTTC	9																																																																															9
AAGATT/AATCTT	9																																																																															9
AAGCAC/CTTGTG	1																																																																															1
AAGCAG/CTGCTT	1																																																																															1
AAGCCT/AGGCTT	1																																																																															1
AAGCGG/CCGCTT	1																																																																															1
AAGCGT/ACGCTT	2																																																																															2
AAGCTC/AGCTTG	1																																																																															1
AAGCTT/AAGCTT	3																																																																															3
AAGGAC/CCTTGT	1																																																																															1
AAGGAG/CCTTCT	2																																																																															2
AAGGAT/ATCCTT	2																																																																															2
AAGGCG/CCTTCG	1																																																																															1
AAGGGG/CCCCTT	1																																																																															1
AAGGGT/ACCCTT	1	1																																																																														2
AAGGTG/ACCTTC	1																																																																															1
AAGTAC/ACTTGT	3	1																																																																														4
AAGTAG/ACTTCT	5																																																																															5
AAGTAT/ACTTAT	4			1		1																																																																										6
AAGTCC/ACTTGG			1																																																																													1
AAGTCT/ACTTAG	4																																																																															4
AAGTGC/ACTTGC	2																																																																															2
AAGTGG/ACTTCC	2																																																																															2
AAGTGT/ACACTT	10																																																																															10
AATACG/ATTCGT	5																																																																															5
AATACT/AGTATT	5																																																																															5
AATAGC/ATTGCT	9																																																																															9
AATAGG/ATTCCT	4	1				1																																																																										6
AATAGT/ACTATT	5																																																																															5
AATATC/ATATTG	6																																																																															6
AATATG/ATATTC	11	3																																																																														14
AATATT/AATATT	17																																																																															17
AATCAC/ATTGTG	1																																																																															1
AATCAG/ATTCTG	25	2																																																																														27
AATCAT/ATGATT	10	1																																																																														11
AATCCT/AGGATT	1																																																																															1
AATCGT/ACGATT	5																																																																															5
AATCTC/AGATTG	3																																																																															3
AATCTG/AGATTC	5	1																																																																														6
AATGAC/ATTGTC	5																																																																															5
AATGAG/ATTCTC	8		1	1		1	2		1																																																																							14
AATGAT/ATCATT	8																																																																															8
AATGCC/ATTGGC	1																																																																															1
AATGCG/ATTCGC	2	2																																																																														4
AATGGC/ATTGCC	3																																																																															3
AATGGG/ATTCCC	3	1																																																																														4
AATGGT/ACCATT	4																																																																															4
AATGTC/ACATTG	6																																																																															6
AATGTG/ACATTC	6																																																																															6
AATTAC/AATTGT	9																																																																															9
AATTAG/AATTCT	8																																																																															8
AATTAT/AATTAT	23	1																																																																														24
AATTCC/AATTGG	2																																																																															2
AATTCG/AATTCG	2																																																																															2
AATTGC/AATTGC	1																																																																															1
ACACAG/CTGTGT	2	1																																																																														3
ACACAT/ATGTGT	18	3	1																																																																													22
ACACCC/GGGTGT	2	1																																																																														3
ACACCG/CGGTGT	2																																																																															2
ACACCT/AGGTGT	1																																																																															1
ACACGC/CGTGTG	17	5	1		2	1																																																																										26
ACACGG/CCGTGT	1																																																																															1
ACACGT/ACGTGT	2																																																																															2
ACACTC/AGTGTG	5																																																																															5
ACACTG/AGTGTC	2																																																																															2
ACAGAG/CTCTGT	1								1																																																																							2
ACAGAT/ATCTGT	1																																																																															1
ACAGCG/CGCTGT	1			1																																																																												2
ACAGGC/CCTGTG	2																																																																															2
ACAGGT/ACCTGT	7	1																																																																														8
ACAGTC/ACTGTG	1																																																																															1
ACAGTG/ACTGTC	11																																																																															11
ACATAG/ATGTCT	3																																																																															3
ACATAT/ATATGT	16																																																																															16
ACATCC/ATGTGG	1																																																																															1
ACATCG/ATGTCG	4																																																																															4
ACATCT/AGATGT	1																																																																															1
ACATGG/ATGTCC	1																																																																															1
ACATGT/ACATGT	1																																																																															1
ACCACG/CGTGGT	2	1																																																																														3
ACCACT/AGTGGT	4																																																																															4
ACCAGC/CTGGTG	3																																																																															3
ACCAGT/ACTGGT	2																																																																															2
ACCATC/ATGGTG	2	1																																																																														3
ACCCGC/CGGGTG	11	3																																																																														14
ACCCTC/AGGGTG	2																																																																															2
ACCGAG/CGGTCT	1																																																																															1
ACCGAT/ATCGGT	6	2																																																																														8
ACCGCC/CGGTGG	2	1																																																																														3
ACCGCG/CGCGGT	10																																																																															10
ACCGCT/AGCGGT	2																																																																															2
ACCGGG/CCCGGT		1	1																																																																													2
ACCGTG/ACGGTC	2	1																																																																														3
ACCTAG/AGGTCT	1				1																																																																											2
ACCTAT/AGGTAT	13																																																																															13
ACCTCC/AGGTGG	3																																																																															3
ACCTCG/AGGTCG	1																																																																															1
ACCTGG/AGGTCC	1																																																																															1
ACGACT/AGTCGT	2																																																																															2
ACGAGC/CGTGCT	2																																																																															2
ACGAGT/ACTCGT	4																																																																															4
ACGATG/ATCGTC	7																																																																															7
ACGCAG/CGTCTG	2																																																																															2
ACGCCC/CGTGGG	6	2																																																																														8
ACGCCG/CGGCGT	3																																																																															3
ACGCGC/CGCGTG	2																																																																															2
ACGCTC/AGCGTG	1																																																																															1
ACGGAG/CCGTCT	1																																																																															1
ACGGAT/ATCCGT	4																																																																															4
ACGGCG/CCGTCG	6																																																																															6
ACGGGC/CCCGTG	2																																																																															2
ACGTAG/ACGTCT	1																																																																															1
ACGTAT/ACGTAT	1																																																																															1
ACGTCG/ACGTCG	2																																																																															2
ACGTGC/ACGTGC	1																																																																															1
ACTAGC/AGTGCT	1																																																																															1
ACTAGG/AGTCCT	1																																																																															1
ACTAGT/ACTAGT		1																																																																														1
ACTATC/AGTGAT	7																																																																															7
ACTATG/AGTCAT	2																																																																															2
ACTCAG/AGTCTG	3																																																																															3
ACTCCC/AGTGGG	1																																																																															1
ACTCCG/AGTCGG	1																																																																															1
ACTCCT/AGGAGT	2																																																																															2
ACTCGC/AGTGCG	1																																																																															1
ACTCGG/AGTCCG	1																																																																															1
ACTCTC/AGAGTG	2	1																																																																														3
ACTGAG/AGTCTC	2																																																																															2
ACTGCG/AGTCGC	2																																																																															2
ACTGGG/AGTCCC		1																																																																														1
AGAGAT/ATCTCT	4	2	1																																																																													7
AGAGCC/CTCTGG	1																																																																															1
AGAGCG/CGCTCT	1																																																																															1
AGAGCT/AGCTCT	6	1																																																																														7
AGAGGC/CCTCTG	1																																																																															1
AGAGGG/CCCTCT	2	1																																																																														3
AGATAT/ATATCT	79	6	1																																																																													86
AGATCC/ATCTGG	2																																																																															2
AGCATC/ATGCTG	2																																																																															2
AGCCAT/ATGGCT	1																																																																															1
AGCCCG/CGGGCT	1																																																																															1
AGCCCT/AGGGCT	1																																																																															1
AGCCGC/CGGCTG	18	1				1																																																																										20
AGCGAT/ATCGCT	1																																																																															1
AGCGCG/CGCGCT	3																																																																															3
AGCGGC/CCGCTG	3																																																																															3
AGCGGG/CCCGCT	2																																																																															2
AGCTAT/AGCTAT	2																																																																															2
AGGATG/ATCCTC	4	2																																																																														6
AGGCGC/CCTGCG	4																																																																															4
AGGCGG/CCGCCT	5	4	1																																																																													10
AGGGCG/CCCTCG	1																																																																															1
AGGGGG/CCCCCT	3																																																																															3
ATATCC/ATATGG	6																																																																															6
ATATCG/ATATCG	2																																																																															2
ATCATG/ATCATG	1																																																																															1
ATCCGC/ATGCGG	6																																																																															6
CCCCCG/CGGGGG	7																																																																															7
CCCGCG/CGCGGG	1	2																																																																														3
