Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_018230785.1/fasta/hub_GCA_018230785.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              376813
Total size of examined sequences (bp):           143815812
Total number of identified SSRs:                 28095
Number of SSR containing sequences:              25800
Number of sequences containing more than 1 SSR:  1934
Number of SSRs present in compound formation:    1627


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	510
2	3314
3	7412
4	6952
5	8154
6	1753

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	10	10	8	5	5	5	5	1	2	1	1	3	1			2	1	1		1				1						2	2	1			1	1			2		1		3			1			1			1	1			3	2	2				87
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	6	9	12	9	3	7	6	6	6	2	2	4	2	6	3	5	4	4	2	1	4	1	2	3	2	1	1	2	4				1							1									1													122
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	13	11	9	9	9	6	6	5	10	9	7	3	4	6	3	5	3	2	4	1	2	1	4		4	3	2	2	2		3	1						4													1						2					156
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	22	12	11	13	6	4	1	3	6	4	1	2	1	4	1	1	1	1		1			1			2	2		1	2	1	4	1	3	2		2	2	1		2	1	1			1			1		1		2	3	5	4	2	2			1	145
AC	-	-	-	147	76	40	27	15	8	5	4	2	2	3	3			2	3	2				1			1	1		1		1			1																																												345
AG	-	-	-	73	43	30	17	10	5	3	5		2		1	2																1																																															192
AT	-	-	-	307	126	71	39	24	11	5	7	3	2	3	2							1																																																									601
CA	-	-	-	107	35	31	16	9	4	8	1	2	3	1			2	2	1		2	1	1			1		1					1		1																																												230
CG	-	-	-	5																																																																											5
CT	-	-	-	65	35	16	10	3	2	1	2	2	1	2	1																																																																140
GA	-	-	-	50	32	17	5	3	4	1	2	1		1																																																																	116
GC	-	-	-	6	3	1																																																																									10
GT	-	-	-	140	62	41	29	11	12	5	2			6	3		1			1		1		1		1		3		1								1																																									321
TA	-	-	-	348	127	76	46	23	13	8	5	6	3		1	1	1	1																																																													659
TC	-	-	-	102	55	32	21	7	8	2	1		1						1											1																																																	231
TG	-	-	-	201	85	67	34	18	10	9	11	5	5	1	3	2	1			1	2	1	2		1		1				1		1	1	1																																												464
AAC	-	-	7			1																																																																									8
AAG	-	-	29	12	4	1			1			1																																																																			48
AAT	-	-	286	96	24	3	2		1	1																																																																					413
ACA	-	-	7	2	1			1																																																																							11
ACC	-	-	3	1	1																																																																										5
ACG	-	-	3	1		1																																																																									5
ACT	-	-	14	2	1			1																																																																							18
AGA	-	-	15	3	2	1																																																																									21
AGC	-	-	1																																																																												1
AGG	-	-	2	1	1																																																																										4
AGT	-	-	11	6	2	1		1																																																																							21
ATA	-	-	324	100	28	13	4			1																																																																					470
ATC	-	-	365	240	130	59	22	12	3	6	3	5	2	1																																																																	848
ATG	-	-	123	52	26	15	9	6		3		1	1																																																																		236
ATT	-	-	224	76	20	5	5	3	1																																																																						334
CAA	-	-	6	2																																																																											8
CAC	-	-	1		2																																																																										3
CAG	-	-	5		1																																																																										6
CAT	-	-	98	59	30	10	3	4	3	1	3						1																																																														212
CCA	-	-	1			1																																																																									2
CCG	-	-	4	1	1																																																																										6
CCT	-	-	3																																																																												3
CGA	-	-	1		1																																																																										2
CGC	-	-	6		1																																																																										7
CGG	-	-	3	1																																																																											4
CGT	-	-	1																																																																												1
CTA	-	-	22	4	1	1		2				1																																																																			31
CTC	-	-				1																																																																									1
CTG	-	-	8	3		1			1																																																																						13
CTT	-	-	19	8	3	1	1			1																																																																					33
GAA	-	-	18	3																																																																											21
GAC	-	-	1																																																																												1
GAG	-	-	7																																																																												7
GAT	-	-	89	35	17	10	9	4		1		2	2																																																																		169
GCA	-	-	1		1																																																																										2
GCC	-	-	5		2																																																																										7
GCG	-	-	6	2																																																																											8
GCT	-	-	3	1																																																																											4
GGA	-	-	3																																																																												3
GGC	-	-	6	1	1																																																																										8
GGT	-	-	7	2																																																																											9
GTA	-	-	8	6																																																																											14
GTC	-	-	2	2																																																																											4
GTG	-	-	2	1																																																																											3
GTT	-	-	2		2																																																																										4
TAA	-	-	234	91	23	7	3	3		1																																																																					362
TAC	-	-	15	5	6																																																																										26
TAG	-	-	24	3	2			1																																																																							30
TAT	-	-	357	98	23	8	5	3																																																																							494
TCA	-	-	464	338	187	85	24	11	12	5	2	1	1	1	1	1																																																															1133
TCC	-	-	2			2																																																																									4
TCG	-	-	4	3																																																																											7
TCT	-	-	23	10	2	3	1		1																																																																						40
TGA	-	-	703	531	259	129	59	16	8	12	5	3	1	2									1		1																																																						1730
TGC	-	-	5	2		3	1																																																																								11
TGG	-	-	7	2																																																																											9
TGT	-	-	4	3	2		1																																																																								10
TTA	-	-	294	119	31	7	4	1	1																																																																						457
TTC	-	-	32	9	3	2																																																																									46
TTG	-	-	11	2		1																																																																									14
AAAC	-	16	8	2	1	1																																																																									28
AAAG	-	11	2	1		1	1						1																																																																		17
AAAT	-	265	50	16	6	3		3	4	1							1																																																														349
AACA	-	11	2	1			1			1																																																																					16
AACC	-	4																																																																													4
AACG	-		1			2																																																																									3
AACT	-	5	1																																																																												6
AAGA	-	8	2	2	1							1					1																																																														15
AAGG	-	5																																																																													5
AAGT	-	19	3	2																																																																											24
AATA	-	335	110	27	12	5	6	5	2	1	1		2				2																																																														508
AATC	-	8	6	3																																																																											17
AATG	-	15	6	5	1																																																																										27
AATT	-	44	8	2	1																																																																										55
ACAA	-	12	5		2	2																																																																									21
ACAG	-	46	15	5	3	1	4	3	1					1			1																																																														80
ACAT	-	30	5	4		3	1																																																																								43
ACCA	-	2																																																																													2
ACCG	-	1																																																																													1
ACCT	-	21	5	2		1																																																																									29
ACGA	-	3	1																																																																												4
ACGC	-		1																																																																												1
ACGG	-	1																																																																													1
ACGT	-	3		1																																																																											4
ACTA	-	5																																																																													5
ACTC	-	4	3		1																																																																										8
ACTG	-	8	3	1				1				2																																																																			15
ACTT	-	10	2							1																																																																					13
AGAA	-	12	3	3	1	2	1																																																																								22
AGAC	-	14	2										1																																																																		17
AGAT	-	23	3	1		1	1					1																																																																			30
AGCA	-	1																																																																													1
AGCC	-	1																																																																													1
AGCG	-	1																																																																													1
AGCT	-	2	1																																																																												3
AGGA	-		1																																																																												1
AGGT	-	37	2		3																																																																										42
AGTA	-	17	4		1	1			1	1		1																																																																			26
AGTC	-	5	2							1																																																																					8
AGTG	-	8	2	1			2																																																																								13
AGTT	-	2																																																																													2
ATAA	-	230	50	21	12	1	3	3		1	1				1																																																																323
ATAC	-	52	8	4	1							1																																																																			66
ATAG	-	18	9				1				1																																																																				29
ATCA	-	12	5	1							1																																																																				19
ATCC	-	13	5	3								1		1																																																																	23
ATCG	-	5																																																																													5
ATCT	-	16			1								1		1																																																																19
ATGA	-	17	2	1	1	1					1																																																																				23
ATGC	-	1																																																																													1
ATGG	-	9	4			1																																																																									14
ATGT	-	23	2	6	2	1																																																																									34
ATTA	-	40	7																																																																												47
ATTC	-	41	10	3	3	2											1																																																														60
ATTG	-	24	9	2			1	1		1																																																																					38
ATTT	-	204	38	16	9	2	1		2		1	1	1				1																																																														276
CAAA	-	48	6																																																																												54
CAAC	-	2																																																																													2
CAAG	-	2	1																																																																												3
CAAT	-	8	2	4																																																																											14
CACG	-	3																																																																													3
CACT	-	3																																																																													3
CAGA	-	11	3	4		2																																																																									20
CAGC	-		1																																																																												1
CAGT	-	3	1			2						1																																																																			7
CATA	-	26	6	3		1				1																																																																					37
CATC	-	15	4	2	1																																																																										22
CATG	-	3	1																																																																												4
CATT	-	13	2	1	1						1																																																																				18
CCAA	-	2																																																																													2
CCAG	-		1																																																																												1
CCAT	-	14	6	2								1																																																																			23
CCCT	-			1																																																																											1
CCGC	-	1																																																																													1
CCGT	-	4																																																																													4
CCTA	-	24	2	2			1																																																																								29
CCTG	-	2			1																																																																										3
CCTT	-	3																																																																													3
CGAA	-	3																																																																													3
CGAT	-	2																																																																													2
CGCA	-						1																																																																								1
CGTA	-	3		1																																																																											4
CGTC	-	2		1																																																																											3
CGTG	-	2	2																																																																												4
CGTT	-	1																																																																													1
CTAA	-	1																																																																													1
CTAC	-	46	5	2	2																																																																										55
CTAG	-	1	1																																																																												2
CTAT	-	6	2					1				1																																																																			10
CTCA	-	3	1		1	1			1																																																																						7
CTCG	-	2																																																																													2
CTGA	-	3	1		2		1	1								1		2																																																													11
CTGT	-	10	1						1	1																																																																					13
CTTA	-	8	3	1																																																																											12
CTTC	-	14	3			2																																																																									19
CTTG	-	5	1																																																																												6
CTTT	-	8	1	2			1																																																																								12
GAAA	-	13	9	1	1	2	1																																																																								27
GAAC	-			1																																																																											1
GAAG	-	3	3																																																																												6
GAAT	-	15	6	2																																																																											23
GACA	-	13	4	1	2	1		1		1																																																																					23
GACG	-	3																																																																													3
GACT	-	9	2										1		1																																																																13
GAGC	-			1																																																																											1
GAGG	-	1																																																																													1
GAGT	-	1	2			1																																																																									4
GATA	-	11	3			2																																																																									16
GATC	-	2																																																																													2
GATG	-	51	13	4	1			1																																																																							70
GATT	-	5				1																																																																									6
GCAA	-	2																																																																													2
GCAC	-	1	1																																																																												2
GCAG	-	1																																																																													1
GCAT	-	6	1																																																																												7
GCCT	-		1																																																																												1
GCGA	-	1																																																																													1
GCGT	-			1																																																																											1
GCTA	-	1																																																																													1
GCTG	-	2																																																																													2
GCTT	-	1		1																																																																											2
GGAA	-	1	1																																																																												2
GGAC	-	1	2																																																																												3
GGAT	-	6	2																																																																												8
GGCA	-	1																																																																													1
GGCG	-	2																																																																													2
GGCT	-	1																																																																													1
GGGA	-	1																																																																													1
GGTA	-	40	6	2	1																																																																										49
GGTC	-		1																																																																												1
GGTT	-	1																																																																													1
GTAA	-	10	1	1																																																																											12
GTAC	-	3	2																																																																												5
GTAG	-	72	12	5	2	1		1																																																																							93
GTAT	-	35	5	1	1																																																																										42
GTCA	-	16	3	1	1					1																																																																					22
GTCC	-	6		1																																																																											7
GTCG	-	1																																																																													1
GTCT	-	10	3	2												1																																																															16
GTGA	-	7	3	2			2	1		2																																																																					17
GTGC	-	8	1	2	1		1																																																																								13
GTTA	-	3																																																																													3
GTTC	-	1																																																																													1
GTTG	-	5	2																																																																												7
GTTT	-	41	9	2							1																																																																				53
TAAA	-	341	115	26	15	7	4	6	2	3	1		1			1																																																															522
TAAC	-	5																																																																													5
TAAG	-	26	4	1						1																																																																					32
TAAT	-	49	7	2																																																																											58
TACA	-	55	9	4	3	1	1			1					1																																																																75
TACC	-	141	14	3	1																																																																										159
TACG	-	5																																																																													5
TACT	-	21	7	4	1		1											1																																																													35
TAGA	-	14	4	2	1																																																																										21
TAGC	-	3																																																																													3
TAGG	-	78	16	2																																																																											96
TAGT	-	2																																																																													2
TATC	-	21	7		1	1																																																																									30
TATG	-	59	19	2	1	2	2		1	1																																																																					87
TATT	-	517	153	50	31	18	8	22	6	5	1	3			1	3	1																																																														819
TCAA	-	7	7	3		1	2							1																																																																	21
TCAC	-	9	5		2			1																																																																							17
TCAG	-	6	5	2	1																																																																										14
TCAT	-	23	4	4	1	1		2																																																																							35
TCCA	-	30	7	2																																																																											39
TCCG	-	1																																																																													1
TCCT	-	1										1																																																																			2
TCGA	-	1																																																																													1
TCGT	-	2																																																																													2
TCTA	-	7	6	1		1									1																																																																16
TCTG	-	25	16	8	7	1	5	2	1					1																																																																	66
TCTT	-	12	2	1		1			1			1																																																																			18
TGAA	-	20	1	2	1		1																																																																								25
TGAC	-	24	9	2	1																																																																										36
TGAG	-	6	3	1																																																																											10
TGAT	-	11	5	1																																																																											17
TGCA	-		1																																																																												1
TGCC	-	1	1																																																																												2
TGCG	-	4																																																																													4
TGCT	-	1																																																																													1
TGGA	-	5	1																																																																												6
TGGT	-	2																																																																													2
TGTA	-	39	6	1	2				3																																																																						51
TGTC	-	32	11	2	2	1					2		1	1						1																																																											53
TGTT	-	24	6	2				1		1																																																																					34
TTAA	-	41	3	3																																																																											47
TTAC	-	9	4	1	1	1																																																																									16
TTAG	-	3	1																																																																												4
TTAT	-	218	52	14	6	2		2																																																																							294
TTCA	-	24	9	4	1	2	2						1																																																																		43
TTCC	-	2																																																																													2
TTCG	-	9	4	1				1																																																																							15
TTCT	-	21	9	3	2									1			1																																																														37
TTGA	-	16	2	1	2	1												1																																																													23
TTGC	-	2																																																																													2
TTGG	-	2	1																																																																												3
TTGT	-	20	6	2	1						1																																																																				30
TTTA	-	324	89	30	9	6	5	2	2	1		2		1																																																																	471
TTTC	-	23	11	3	3	3	1	1			2	2					2	1																																																													52
TTTG	-	28	11	2	2	1								1																																																																	45
AAAAC	31	2	1																																																																												34
AAAAG	18																																																																														18
AAAAT	150	10	2																																																																												162
AAACA	19	1																																																																													20
AAACC	3																																																																														3
AAACT	13		1																																																																												14
AAAGA	10	1																																																																													11
AAAGC	3																																																																														3
AAAGG	2																																																																														2
AAAGT	19	3																																																																													22
AAATA	138	10	2		1																																																																										151
AAATC	35	8																																																																													43
AAATG	40	1																																																																													41
AAATT	84	4	1																																																																												89
AACAA	19	1																																																																													20
AACAC	4		1					1																																																																							6
AACAG	1																																																																														1
AACAT	8																																																																														8
AACCA	8																																																																														8
AACCC	1																																																																														1
AACCT	20	6	2	1	1	2	1	2	1	2	1	1	5																																																																		45
AACGA	3	1																																																																													4
AACGT	7																																																																														7
AACTA	12	2	1																																																																												15
AACTC	3																																																																														3
AACTG	4																																																																														4
AACTT	9																																																																														9
AAGAA	11	2																																																																													13
AAGAC	3																																																																														3
AAGAG	3																																																																														3
AAGAT	11	1																																																																													12
AAGCA	4																																																																														4
AAGCC	2																																																																														2
AAGCT	4	2																																																																													6
AAGGA	4																																																																														4
AAGGC	3	1																																																																													4
AAGGG	1																																																																														1
AAGGT	7																																																																														7
AAGTA	8	2																																																																													10
AAGTC	12	1	1																																																																												14
AAGTG	8	1																																																																													9
AAGTT	7	1																																																																													8
AATAA	145	5	2																																																																												152
AATAC	15	1																																																																													16
AATAG	13	3																																																																													16
AATAT	35	1		1																																																																											37
AATCA	17	4																																																																													21
AATCC	1	1																																																																													2
AATCG	4																																																																														4
AATCT	9	1																																																																													10
AATGA	28	4	3																																																																												35
AATGC	4																																																																														4
AATGG	2																																																																														2
AATGT	22	4	1																																																																												27
AATTA	63	3																																																																													66
AATTC	27	1	1																																																																												29
AATTG	31	1																																																																													32
AATTT	75	5	1																																																																												81
ACAAA	10																																																																														10
ACAAC	7										1																																																																				8
ACAAG	1																																																																														1
ACAAT	13	3																																																																													16
ACACA	8						1				1		1																																																																		11
ACACC		1																																																																													1
ACACG		1																																																																													1
ACACT	8	1																																																																													9
ACAGA	5																																																																														5
ACAGC	4																																																																														4
ACAGT	5																																																																														5
ACATA	8																																																																														8
ACATC	3																																																																														3
ACATG	10																																																																														10
ACATT	19																																																																														19
ACCAA	3																																																																														3
ACCAC	1																																																																														1
ACCAG	1																																																																														1
ACCCA	2																																																																														2
ACCGA	1																																																																														1
ACCGC	2																																																																														2
ACCGT	1																																																																														1
ACCTA	26	3	1	2	4	8	1	5	4	3	2	4	8																																																																		71
ACCTC	3																																																																														3
ACCTG	3																																																																														3
ACCTT	10																																																																														10
ACGAA	5	1																																																																													6
ACGAC	2																																																																														2
ACGAG	2																																																																														2
ACGAT	2																																																																														2
ACGCA	2																																																																														2
ACGCC	1																																																																														1
ACGCT	1																																																																														1
ACGGA	1	1																																																																													2
ACGTA	7																																																																														7
ACGTC	10																																																																														10
ACGTG	3	1																																																																													4
ACGTT	5																																																																														5
ACTAA	13																																																																														13
ACTAC	16																																																																														16
ACTAG	7																																																																														7
ACTAT	17	1																																																																													18
ACTCA	3	1																																																																													4
ACTCC	2		1																																																																												3
ACTCG	2																																																																														2
ACTCT	3																																																																														3
ACTGA	4																																																																														4
ACTGC	2																																																																														2
ACTGT	9	2																																																																													11
ACTTA	3																																																																														3
ACTTC	3																																																																														3
ACTTG	5	2																																																																													7
ACTTT	11	1																																																																													12
AGAAA	10	1																																																																													11
AGAAC	4																																																																														4
AGAAG	5	1																																																																													6
AGAAT	9																																																																														9
AGACA	3																																																																														3
AGACC	2																																																																														2
AGACG	1																																																																														1
AGACT	3	1																																																																													4
AGAGA	6																																																																														6
AGAGG	1																																																																														1
AGAGT	1																																																																														1
AGATA	6		1									1																																																																			8
AGATC	3																																																																														3
AGATG	2																																																																														2
AGATT	7																																																																														7
AGCAA	3																																																																														3
AGCAC	1																																																																														1
AGCAT	1																																																																														1
AGCCC	1																																																																														1
AGCGG	1																																																																														1
AGCGT	2																																																																														2
AGCTC	2																																																																														2
AGCTG	1																																																																														1
AGCTT	4																																																																														4
AGGAA	3																																																																														3
AGGAC	1																																																																														1
AGGAG	3																																																																														3
AGGAT	5																																																																														5
AGGCA	1																																																																														1
AGGCC	1																																																																														1
AGGCT	3	1																																																																													4
AGGGA		1																																																																													1
AGGGT	1																																																																														1
AGGTA	8	2																																																																													10
AGGTC	1																																																																														1
AGGTG	5																																																																														5
AGGTT	14	2	3	3	2		1	2				1	4																																																																		32
AGTAA	4																																																																														4
AGTAC	4				1																																																																										5
AGTAG	7	1																																																																													8
AGTAT	7	1	1																																																																												9
AGTCA	2	2																																																																													4
AGTCC	1																																																																														1
AGTCT	4	1																																																																													5
AGTGA	5	2																																																																													7
AGTGC	2	1		3																																																																											6
AGTGG	3																																																																														3
AGTGT	13																																																																														13
AGTTA	3	1																																																																													4
AGTTC	6																																																																														6
AGTTG	4																																																																														4
AGTTT	11	2																																																																													13
ATAAA	95	1	1																																																																												97
ATAAC	10	1																																																																													11
ATAAG	15	2			1								1																																																																		19
ATAAT	73	3																																																																													76
ATACA	17		1																																																																												18
ATACC	2																																																																														2
ATACG	4																																																																														4
ATACT	9																																																																														9
ATAGA	10																																																																														10
ATAGC	5																																																																														5
ATAGG	5																																																																														5
ATAGT	9	1																																																																													10
ATATA	57	3				1																																																																									61
ATATC	3	1																																																																													4
ATATT	53		1																																																																												54
ATCAA	38	10	1																																																																												49
ATCAC	5	1																																																																													6
ATCAG	6																																																																														6
ATCAT	5																																																																														5
ATCCA	4	1																																																																													5
ATCCC	4																																																																														4
ATCCG	2	1																																																																													3
ATCCT	3	1		1																																																																											5
ATCGA	4																																																																														4
ATCGC	1																																																																														1
ATCGG	1																																																																														1
ATCGT	5													1																																																																	6
ATCTA	9	1																																																																													10
ATCTC	4																																																																														4
ATCTG	7																																																																														7
ATCTT	10	2																																																																													12
ATGAA	17	8	1	3		1																																																																									30
ATGAC	8	1																																																																													9
ATGAG	1																																																																														1
ATGAT	1																																																																														1
ATGCA	2																																																																														2
ATGCC	3																																																																														3
ATGCT	2																																																																														2
ATGGA	1	1																																																																													2
ATGGC	2																																																																														2
ATGGG	3																																																																														3
ATGGT	4	1																																																																													5
ATGTA	26	1																																																																													27
ATGTC	8	1																																																																													9
ATGTG	4																																																																														4
ATGTT	8	2	1		1																																																																										12
ATTAA	54	6																																																																													60
ATTAC	19	3																																																																													22
ATTAG	17	1																																																																													18
ATTAT	45																																																																														45
ATTCA	14	5																																																																													19
ATTCC	6			2	1		1	1																																																																							11
ATTCG	4	1																																																																													5
ATTCT	10	1																																																																													11
ATTGA	16	4																																																																													20
ATTGC	3																																																																														3
ATTGG	1																																																																														1
ATTGT	18	2																																																																													20
ATTTA	75	3	1																																																																												79
ATTTC	33	8																																																																													41
ATTTG	35	4																																																																													39
ATTTT	134	6	1	1																																																																											142
CAAAA	8																																																																														8
CAAAC	2	1																																																																													3
CAAAG	2																																																																														2
CAAAT	23	5																																																																													28
CAACA	3		1									1																																																																			5
CAACG	1											1																																																																			2
CAACT	1																																																																														1
CAAGA	5																																																																														5
CAAGC	1																																																																														1
CAAGG	2																																																																														2
CAAGT	2																																																																														2
CAATA	11																																																																														11
CAATC	1																																																																														1
CAATG	6																																																																														6
CAATT	11	1	1																																																																												13
CACAA	7					2		1																																																																							10
CACAC	2	1																																																																													3
CACAG	2																																																																														2
CACAT	2	1																																																																													3
CACCA		1			1																																																																										2
CACCG	1																																																																														1
CACCT	2																																																																														2
CACGA	2																																																																														2
CACGC	1																																																																														1
CACTA	2		1										1																																																																		4
CACTC		2																																																																													2
CACTG	4																																																																														4
CACTT	6																																																																														6
CAGAG	1																																																																														1
CAGAT	3																																																																														3
CAGCA	1																																																																														1
CAGCG	1																																																																														1
CAGCT	2																																																																														2
CAGGC	1																																																																														1
CAGGT	1																																																																														1
CAGTA	1																																																																														1
CAGTC	2																																																																														2
CAGTG	3																																																																														3
CATAA	5	1																																																																													6
CATAC	2																																																																														2
CATAG	5																																																																														5
CATAT	3																																																																														3
CATCA	6																																																																														6
CATCC	1																																																																														1
CATCT	1	1																																																																													2
CATGA	7																																																																														7
CATGC	1																																																																														1
CATGG	2	1																																																																													3
CATGT	8																																																																														8
CATTA	7	1																																																																													8
CATTC	4	2																																																																													6
CATTG	4																																																																														4
CATTT	19	1											1																																																																		21
CCAAA	2																																																																														2
CCAAT	1																																																																														1
CCACC	1																																																																														1
CCACT	2		1																																																																												3
CCAGA	1			1																																																																											2
CCAGG	2																																																																														2
CCAGT	1																																																																														1
CCATG	4																																																																														4
CCATT	4																																																																														4
CCCAG	1																																																																														1
CCCAT	2																																																																														2
CCCCG		1																																																																													1
CCCCT	3																																																																														3
CCCGA	1																																																																														1
CCCGC	1																																																																														1
CCCTA		1																																																																													1
CCGAC	1																																																																														1
CCGCG	2																																																																														2
CCGTA	2																																																																														2
CCGTG	1																																																																														1
CCGTT	1																																																																														1
CCTAA	20		3	2				3	2	5	1	6	5																																																																		47
CCTAC	3																																																																														3
CCTAG	2																																																																														2
CCTAT	2																																																																														2
CCTCA	2	1																																																																													3
CCTCC	1																																																																														1
CCTCG	1																																																																														1
CCTCT	2																																																																														2
CCTGG	1																																																																														1
CCTGT	1																																																																														1
CCTTA	6						1																																																																								7
CCTTG	1																																																																														1
CCTTT	2																																																																														2
CGAAA	1																																																																														1
CGAAC	1																																																																														1
CGAAT	3																																																																														3
CGACA	4																																																																														4
CGACG	1	1																																																																													2
CGACT	1																																																																														1
CGAGT		1																																																																													1
CGATA	6	1																																																																													7
CGATC	1																																																																														1
CGATG	1																																																																														1
CGCAA	1																																																																														1
CGCAC	2																																																																														2
CGCCG	4																																																																														4
CGCCT	1																																																																														1
CGCGA	2																																																																														2
CGCGC	3																																																																														3
CGCGG	1																																																																														1
CGCTT	1																																																																														1
CGGAT	2																																																																														2
CGGCA	1																																																																														1
CGGCG	4																																																																														4
CGGGT	1																																																																														1
CGGTA	1																																																																														1
CGTAA	5																																																																														5
CGTAC	1																																																																														1
CGTAT	3																																																																														3
CGTCA	6																																																																														6
CGTCG	3																																																																														3
CGTGA	3																																																																														3
CGTGG	2																																																																														2
CGTGT	2																																																																														2
CGTTA	4	1																																																																													5
CGTTG							1																																																																								1
CGTTT	3																																																																														3
CTAAA	8																																																																														8
CTAAC	46	8		4	1		2	1	1		2		5																																																																		70
CTAAG	6																																																																														6
CTAAT	3																																																																														3
CTACA	2	1																																																																													3
CTAGA	2																																																																														2
CTAGC	2																																																																														2
CTAGG	2	1																																																																													3
CTAGT	2																																																																														2
CTATA	13	1																																																																													14
CTATC	4																																																																														4
CTATG	5																																																																														5
CTATT	4																																																																														4
CTCAA	3																																																																														3
CTCAC	1	2																																																																													3
CTCAG	2																																																																														2
CTCAT	1	2																																																																													3
CTCCA	4	1																																																																													5
CTCCG	2																																																																														2
CTCCT	2																																																																														2
CTCGA	2																																																																														2
CTCGC	2																																																																														2
CTCGG	1																																																																														1
CTCGT	1																																																																														1
CTCTA	3																																																																														3
CTCTG	2																																																																														2
CTCTT	1																																																																														1
CTGAA	5																																																																														5
CTGAT	2																																																																														2
CTGCA			1																																																																												1
CTGGA	3																																																																														3
CTGGC	2																																																																														2
CTGTA	6	1																																																																													7
CTGTC	2																																																																														2
CTGTG	5																																																																														5
CTGTT	5																																																																														5
CTTAA	7	2																																																																													9
CTTAC	6	1																																																																													7
CTTAG	2	1																																																																													3
CTTAT	2																																																																														2
CTTCA	6																																																																														6
CTTCG	1																																																																														1
CTTCT	2																																																																														2
CTTGA	5																																																																														5
CTTGC	1																																																																														1
CTTGG	2																																																																														2
CTTGT	3																																																																														3
CTTTA	8	1																																																																													9
CTTTC	3	1																																																																													4
CTTTG	2																																																																														2
CTTTT	9		1																																																																												10
GAAAA	20	2																																																																													22
GAAAC	3																																																																														3
GAAAG	3																																																																														3
GAAAT	20	3		1		1		1																																																																							26
GAACG						1																																																																									1
GAAGA	3	1																																																																													4
GAAGC	1																																																																														1
GAAGG	1																																																																														1
GAATA	7		1																																																																												8
GAATC	3																																																																														3
GAATG	5																																																																														5
GAATT	8	2	1																																																																												11
GACAA	5																																																																														5
GACAC	3																																																																														3
GACAG	1																																																																														1
GACAT	1			1																																																																											2
GACCA	1	1																																																																													2
GACCC	1																																																																														1
GACCT	2																																																																														2
GACGA	1																																																																														1
GACGC	2																																																																														2
GACGT	3	1																																																																													4
GACTA	3	1																																																																													4
GACTC	1																																																																														1
GAGAA	4																																																																														4
GAGAC	1																																																																														1
GAGAG	3																																																																														3
GAGAT	4																																																																														4
GAGCA	1																																																																														1
GAGCT	2	1																																																																													3
GAGGA	2																																																																														2
GAGGC		1																																																																													1
GAGGG	2																																																																														2
GAGGT	7			2																																																																											9
GAGTA	1																																																																														1
GAGTC	1																																																																														1
GAGTG	4	1	1																																																																												6
GAGTT		1																																																																													1
GATAA	6																																																																														6
GATAC	2																																																																														2
GATAG	6	1																																																																													7
GATAT	5																																																																														5
GATCA	3	1																																																																													4
GATCG		1																																																																													1
GATCT	3																																																																														3
GATGA	1	1																																																																													2
GATGG	3																																																																														3
GATGT	8																																																																														8
GATTA	4	1																																																																													5
GATTC	2																																																																														2
GATTG	2																																																																														2
GATTT	20	3																																																																													23
GCAAA	1																																																																														1
GCAAC	2																																																																														2
GCAAG	2																																																																														2
GCAAT	2																																																																														2
GCACA	1																																																																														1
GCACC	1																																																																														1
GCACT	1																																																																														1
GCATA	3																																																																														3
GCATT	1																																																																														1
GCCAA	1																																																																														1
GCCGC	1																																																																														1
GCCGT	1																																																																														1
GCCTT		1																																																																													1
GCGAA	1																																																																														1
GCGCC	2																																																																														2
GCGCG	1																																																																														1
GCGGC	5																																																																														5
GCGGG	2																																																																														2
GCGTC	2																																																																														2
GCGTG	2																																																																														2
GCTAA	3																																																																														3
GCTCA	1																																																																														1
GCTCC	1																																																																														1
GCTCT	1																																																																														1
GCTGC	1																																																																														1
GCTGT	1																																																																														1
GCTTA	1																																																																														1
GCTTG	1																																																																														1
GCTTT	2																																																																														2
GGAAA	1																																																																														1
GGAAC		1																																																																													1
GGAAT	2																																																																														2
GGACT	1																																																																														1
GGAGA	7																																																																														7
GGAGC	1																																																																														1
GGAGG	2																																																																														2
GGAGT	5																																																																														5
GGATG	1																																																																														1
GGATT	2																																																																														2
GGCCT	1																																																																														1
GGCTA	1																																																																														1
GGGCA	1																																																																														1
GGGTT	1																																																																														1
GGTAA	4	2																																																																													6
GGTAC	2																																																																														2
GGTAG	2																																																																														2
GGTAT	3																																																																														3
GGTCA	1																																																																														1
GGTCC		1																																																																													1
GGTGA	3																																																																														3
GGTGC	3																																																																														3
GGTGT	3	1																																																																													4
GGTTA	22	4	5	4	2	5	1	8	9	6	5	13	8																																																																		92
GGTTC	1																																																																														1
GGTTT	1		1																																																																												2
GTAAA	7																																																																														7
GTAAC	3	1																																																																													4
GTAAG	4	2																																																																													6
GTAAT	15		1																																																																												16
GTACA	4																																																																														4
GTACC	1																																																																														1
GTACT	2	2																																																																													4
GTAGA	4																																																																														4
GTAGC	2																																																																														2
GTAGG	3																																																																														3
GTAGT	2	2																																																																													4
GTATA	9	1																																																																													10
GTATC	3	1	1																																																																												5
GTATG	6																																																																														6
GTATT	5																																																																														5
GTCAA	9	2	1																																																																												12
GTCAC	3																																																																														3
GTCAT	6																																																																														6
GTCCA	2																																																																														2
GTCCT	1																																																																														1
GTCGC	2																																																																														2
GTCGT	2	1																																																																													3
GTCTA	2																																																																														2
GTCTC	1																																																																														1
GTCTT	3	1																																																																													4
GTGAA	2																																																																														2
GTGAC	5	1	1																																																																												7
GTGAG	2	1																																																																													3
GTGAT	1																																																																														1
GTGGA	1																																																																														1
GTGGC	1	1																																																																													2
GTGTA	7		1	1																																																																											9
GTGTC	3																																																																														3
GTGTG	5																																																																														5
GTGTT	9			1	1								1																																																																		12
GTTAA	2																																																																														2
GTTAC	3																																																																														3
GTTAG	49	7	2	3	2	2	1	2	5		7	2	6																																																																		88
GTTAT	8	1																																																																													9
GTTCA	6																																																																														6
GTTCC	1																																																																														1
GTTCG	1																																																																														1
GTTCT	5																																																																														5
GTTGA	1																																																																														1
GTTGC	1																																																																														1
GTTGG	1																																																																														1
GTTGT	5		1	1					1	2			1																																																																		11
GTTTA	3	2																																																																													5
GTTTC	3																																																																														3
GTTTG	3																																																																														3
GTTTT	10	1																																																																													11
TAAAA	183	4	2																																																																												189
TAAAC	9																																																																														9
TAAAG	8	1																																																																													9
TAAAT	53	4																																																																													57
TAACA	3																																																																														3
TAACC	26	2				2		3	2	2		3	3																																																																		43
TAACG	8																																																																														8
TAACT	8	1																																																																													9
TAAGA	15	1	1																																																																												17
TAAGC	1																																																																														1
TAAGG	19	1	1																																																																												21
TAAGT	5																																																																														5
TAATA	60	2																																																																													62
TAATC	9																																																																														9
TAATG	24	1																																																																													25
TAATT	44	4																																																																													48
TACAA	20	2																																																																													22
TACAC	5	1																																																																													6
TACAG	5	1	1																																																																												7
TACAT	19	1																																																																													20
TACCA	4	2																																																																													6
TACCC		2																																																																													2
TACCG	1																																																																														1
TACCT	13	1																																																																													14
TACGA	9	1																																																																													10
TACGC	2																																																																														2
TACGG		1																																																																													1
TACGT	4																																																																														4
TACTA	14	1																																																																													15
TACTC	3																																																																														3
TACTG	8	1																																																																													9
TACTT	7																																																																														7
TAGAA	6		1																																																																												7
TAGAC	9																																																																														9
TAGAG	2	2																																																																													4
TAGAT	9																																																																														9
TAGCA	1																																																																														1
TAGCG	2																																																																														2
TAGCT	4																																																																														4
TAGGA	5																																																																														5
TAGGC	1	1																																																																													2
TAGGG	1	1																																																																													2
TAGGT	43	6	2	2			1	1	2			4	4																																																																		65
TAGTA	15		1																																																																												16
TAGTC	4																																																																														4
TAGTG	5		1	1																																																																											7
TAGTT	8																																																																														8
TATAA	44		1	1																																																																											46
TATAC	14			1																																																																											15
TATAG	20	1																																																																													21
TATAT	54	3																																																																													57
TATCA	7	1																																																																													8
TATCC	5																																																																														5
TATCG	5																																																																														5
TATCT	12	1	1																																																																												14
TATGA	12	1																																																																													13
TATGC	4	1																																																																													5
TATGG	8																																																																														8
TATGT	16																																																																														16
TATTA	60	3																																																																													63
TATTC	8	4																																																																													12
TATTG	18	2																																																																													20
TATTT	112	13																																																																													125
TCAAA	47	10	2																																																																												59
TCAAC	3	2																																																																													5
TCAAG	8	1																																																																													9
TCAAT	14	1																																																																													15
TCACA	11		2																																																																												13
TCACC	1	1																																																																													2
TCACG	3																																																																														3
TCACT	6																																																																														6
TCAGA	3																																																																														3
TCAGC	1																																																																														1
TCAGG	1																																																																														1
TCAGT	5																																																																														5
TCATA	9																																																																														9
TCATC	4																																																																														4
TCATG	5	1		1																																																																											7
TCATT	19	3																																																																													22
TCCAA	2																																																																														2
TCCAC	1																																																																														1
TCCAG	2																																																																														2
TCCCA	2																																																																														2
TCCCG	1					1																																																																									2
TCCCT	1																																																																														1
TCCGT	1																																																																														1
TCCTA	3																																																																														3
TCCTC	3																																																																														3
TCCTG	2																																																																														2
TCCTT	2																																																																														2
TCGAA	3																																																																														3
TCGAG	1	1																																																																													2
TCGAT	4																																																																														4
TCGCA	1		1																																																																												2
TCGCG	1			1																																																																											2
TCGTA	7	1																																																																													8
TCGTC	2																																																																														2
TCGTG	3		1																																																																												4
TCGTT	1																																																																														1
TCTAA	10	2																																																																													12
TCTAC	3	1																																																																													4
TCTAG	4																																																																														4
TCTAT	6																																																																														6
TCTCA	3																																																																														3
TCTCC	2	1																																																																													3
TCTCG	1																																																																														1
TCTCT	10																																																																														10
TCTGA	1																																																																														1
TCTGC	1																																																																														1
TCTGG	2																																																																														2
TCTGT	6																																																																														6
TCTTA	9	2																																																																													11
TCTTC	4	1																																																																													5
TCTTG	8	2																																																																													10
TCTTT	14		2	1								1																																																																			18
TGAAA	34	10	4	1		2	1																																																																								52
TGAAC	5																																																																														5
TGAAG	4	1																																																																													5
TGAAT	22	5		1																																																																											28
TGACA	24	1																																																																													25
TGACC	2																																																																														2
TGACG	5																																																																														5
TGACT	2																																																																														2
TGAGA	2	1																																																																													3
TGAGC	1																																																																														1
TGAGG	3	1		1																																																																											5
TGAGT	2																																																																														2
TGATA	6																																																																														6
TGATC	2	1																																																																													3
TGATG	4																																																																														4
TGATT	8	3																																																																													11
TGCAA	4		1																																																																												5
TGCAC		1																																																																													1
TGCAG	2		1																																																																												3
TGCAT	5																																																																														5
TGCCA	3																																																																														3
TGCCG	2																																																																														2
TGCCT	4																																																																														4
TGCGA	3																																																																														3
TGCGT	1																																																																														1
TGCTA	1	1																																																																													2
TGCTC	1																																																																														1
TGCTG	4	1																																																																													5
TGCTT	1																																																																														1
TGGAA	5																																																																														5
TGGAC	3																																																																														3
TGGAG		2																																																																													2
TGGAT	1																																																																														1
TGGCA	1	1																																																																													2
TGGGA		1																																																																													1
TGGGT	1																																																																														1
TGGTA	3																																																																														3
TGGTC	1																																																																														1
TGGTT	3																																																																														3
TGTAA	18	3																																																																													21
TGTAC	6	1																																																																													7
TGTAG	5	1																																																																													6
TGTAT	21																																																																														21
TGTCA	13		1																																																																												14
TGTCC	3																																																																														3
TGTCG	3	1		1																																																																											5
TGTCT	2	1	1																																																																												4
TGTGA	9																																																																														9
TGTGC	5																																																																														5
TGTGG	5																																																																														5
TGTGT	12	1				1				1			1																																																																		16
TGTTA	10		1																																																																												11
TGTTC	1																																																																														1
TGTTG	8							1			1																																																																				10
TGTTT	14																																																																														14
TTAAA	63	7	1																																																																												71
TTAAC	2																																																																														2
TTAAG	3																																																																														3
TTAAT	77	1																																																																													78
TTACA	32	1																																																																													33
TTACC	9																																																																														9
TTACG	4	1																																																																													5
TTACT	7	1																																																																													8
TTAGA	12																																																																														12
TTAGC	5																																																																														5
TTAGG	24	2	4	4	1		3	2		4	2	2	10																																																																		58
TTAGT	8																																																																														8
TTATA	33	2				1																																																																									36
TTATC	11	1																																																																													12
TTATG	11	1																																																																													12
TTATT	148	8											1																																																																		157
TTCAA	22	4	1	1																																																																											28
TTCAC	6																																																																														6
TTCAG	12	1																																																																													13
TTCAT	22	2	2																																																																												26
TTCCA	6				1																																																																										7
TTCCC	1																																																																														1
TTCCG	1																																																																														1
TTCCT	3	1																																																																													4
TTCGA	2																																																																														2
TTCGG	1																																																																														1
TTCGT	2		1																																																																												3
TTCTA	10	1																																																																													11
TTCTC	3																																																																														3
TTCTG	2	1																																																																													3
TTCTT	9	2	1																																																																												12
TTGAA	19																																																																														19
TTGAC	13	3																																																																													16
TTGAG	5																																																																														5
TTGAT	10	1																																																																													11
TTGCA	6																																																																														6
TTGCC	1																																																																														1
TTGCG	2																																																																														2
TTGCT	8																																																																														8
TTGGA	4																																																																														4
TTGGT	6																																																																														6
TTGTA	27	3																																																																													30
TTGTC	11	1																																																																													12
TTGTG	12	2							1				4																																																																		19
TTGTT	14																																																																														14
TTTAA	78	7																																																																													85
TTTAC	9	1		1																																																																											11
TTTAG	19	1																																																																													20
TTTAT	140	6				2																																																																									148
TTTCA	76	22	10		1																																																																										109
TTTCC	5	1																																																																													6
TTTCG	6				1																																																																										7
TTTCT	21	2																																																																													23
TTTGA	97	43	12	1																																																																											153
TTTGC	1																																																																														1
TTTGG	3																																																																														3
TTTGT	12	1																																																																													13
TTTTA	258	12	2		1							1																																																																			274
TTTTC	31					1																																																																									32
TTTTG	29	2																																																																													31
AAAAAC	2																																																																														2
AAAAAG	2																																																																														2
AAAAAT	21																																																																														21
AAAACA	2	1																																																																													3
AAAAGC	1																																																																														1
AAAAGT	1																																																																														1
AAAATA	13																																																																														13
AAAATC	8	3	1																																																																												12
AAAATG	20	3			2					1																																																																					26
AAAATT	4																																																																														4
AAACAG	1																																																																														1
AAACAT	1																																																																														1
AAACTG	1																																																																														1
AAAGAA	1																																																																														1
AAAGAT	1																																																																														1
AAAGGC	1																																																																														1
AAAGGT	1																																																																														1
AAAGTA	1																																																																														1
AAAGTC	7	1																																																																													8
AAATAA	10																																																																														10
AAATAC	1																																																																														1
AAATAG			1																																																																												1
AAATAT		1																																																																													1
AAATCA	2																																																																														2
AAATCG	1																																																																														1
AAATCT	1																																																																														1
AAATGA	6		1																																																																												7
AAATTA	3																																																																														3
AAATTC	6	1																																																																													7
AAATTG	2																																																																														2
AAATTT	6																																																																														6
AACAAA	1																																																																														1
AACAGA	1																																																																														1
AACAGT	1																																																																														1
AACATC	1																																																																														1
AACCCA	1																																																																														1
AACGTA	2																																																																														2
AACTAA	1																																																																														1
AACTAC	1																																																																														1
AACTAG	1																																																																														1
AACTAT	1	1																																																																													2
AACTGT	1																																																																														1
AACTTA	1																																																																														1
AACTTT	1																																																																														1
AAGAAT	1																																																																														1
AAGATA	1																																																																														1
AAGATG	1																																																																														1
AAGATT		1																																																																													1
AAGCCT	1																																																																														1
AAGCTT	1																																																																														1
AAGTCA	4	1																																																																													5
AAGTGT	1																																																																														1
AATAAA	15	1																																																																													16
AATAAC	1																																																																														1
AATAAG	3																																																																														3
AATACA	1																																																																														1
AATACT	1																																																																														1
AATAGT	1																																																																														1
AATATA	5																																																																														5
AATATG	2																																																																														2
AATATT	1																																																																														1
AATCAA	3	1																																																																													4
AATCGA	1																																																																														1
AATCTA	2		1																																																																												3
AATGAA	11									1																																																																					12
AATGAC	1																																																																														1
AATGGA	2																																																																														2
AATGTA	2																																																																														2
AATGTC	1																																																																														1
AATGTT	1																																																																														1
AATTAA	7																																																																														7
AATTAC	1																																																																														1
AATTAG	1																																																																														1
AATTAT	3																																																																														3
AATTCA	4	2		1																																																																											7
AATTGC	1																																																																														1
AATTGG	1																																																																														1
AATTTA	7																																																																														7
AATTTG	1																																																																														1
AATTTT	4																																																																														4
ACAAAG	1																																																																														1
ACAACT		1																																																																													1
ACAAGA	1																																																																														1
ACACAT	2																																																																														2
ACACTA	2																																																																														2
ACACTG	1																																																																														1
ACACTT	1																																																																														1
ACAGAT	1																																																																														1
ACAGCT	1																																																																														1
ACAGGA	1																																																																														1
ACAGTG	1																																																																														1
ACAGTT	2																																																																														2
ACATCA	1																																																																														1
ACATGC	1																																																																														1
ACATTA	1																																																																														1
ACATTG	1																																																																														1
ACATTT	2	1																																																																													3
ACCAAC	1																																																																														1
ACCAAT	1																																																																														1
ACCCGT	1																																																																														1
ACCGAA	4																																																																														4
ACCGTA	1																																																																														1
ACCTAA	1																																																																														1
ACCTAC	1																																																																														1
ACCTAG	1																																																																														1
ACCTGA	2																																																																														2
ACGAGT	1																																																																														1
ACGATT	2																																																																														2
ACGTTT	1		1																																																																												2
ACTAAA	1																																																																														1
ACTAGT	1																																																																														1
ACTATT	1																																																																														1
ACTCGA	1																																																																														1
ACTCTT	1																																																																														1
ACTGAA	1																																																																														1
ACTGGC	1																																																																														1
ACTGGT	1																																																																														1
ACTTAA	1																																																																														1
ACTTAC	1																																																																														1
ACTTAT											1																																																																				1
ACTTCA	1																																																																														1
ACTTCC	2	1																																																																													3
ACTTCG	1																																																																														1
ACTTCT	1																																																																														1
ACTTTG	1																																																																														1
ACTTTT	1																																																																														1
AGAAAA		1																																																																													1
AGAAAG	2																																																																														2
AGAAGC	1																																																																														1
AGAAGT		1																																																																													1
AGAATG					1																																																																										1
AGAATT	1																																																																														1
AGACAG	1																																																																														1
AGACGC	1																																																																														1
AGAGGA	1																																																																														1
AGAGGG	1																																																																														1
AGATAA	1																																																																														1
AGATAT	1	1																																																																													2
AGATGA		1																																																																													1
AGATTA	1																																																																														1
AGCATC	1																																																																														1
AGCGGA	1																																																																														1
AGCTAA	1																																																																														1
AGCTAG	1																																																																														1
AGGAAC	1																																																																														1
AGGCGG	1																																																																														1
AGGGTG	1																																																																														1
AGGTAC	1																																																																														1
AGGTGT	1																																																																														1
AGTAAA	1																																																																														1
AGTAAG	1																																																																														1
AGTAGG	1																																																																														1
AGTATA	1	1																																																																													2
AGTATC	1																																																																														1
AGTATT	1																																																																														1
AGTCAA	6	1																																																																													7
AGTCTT	2																																																																														2
AGTGAT	1																																																																														1
AGTGTC	1																																																																														1
AGTTAA	1																																																																														1
AGTTAG	1																																																																														1
AGTTAT	1																																																																														1
AGTTCA	1																																																																														1
AGTTCT	1																																																																														1
AGTTTA	1																																																																														1
AGTTTT	1																																																																														1
ATAAAA	10																																																																														10
ATAAAG	1																																																																														1
ATAAAT	4																																																																														4
ATAACC	1																																																																														1
ATAAGA		1																																																																													1
ATAATC	1																																																																														1
ATAATG	2																																																																														2
ATAATT	3																																																																														3
ATACAC	1																																																																														1
ATACAT	1	1																																																																													2
ATACCT	2																																																																														2
ATACGT	1																																																																														1
ATACTA	4	1	1	1																																																																											7
ATAGAA	3																																																																														3
ATAGAT	4	1	2																																																																												7
ATAGGT	1																																																																														1
ATATAA	7																																																																														7
ATATAC	5																																																																														5
ATATAG	3		2																																																																												5
ATATCA	1																																																																														1
ATATCG	3																																																																														3
ATATGA																			1																																																												1
ATATGG	1																																																																														1
ATATTA	2																																																																														2
ATATTC	1																		1																																																												2
ATATTT	3																																																																														3
ATCAAA	3	1																																																																													4
ATCAAT	1																																																																														1
ATCACA	1																																																																														1
ATCACT	1																																																																														1
ATCATT		1																																																																													1
ATCCCG	1																																																																														1
ATCCTA	1																																																																														1
ATCCTT	1																																																																														1
ATCGAA	1																																																																														1
ATCGAT	1																																																																														1
ATCTAA	1																																																																														1
ATCTAC	1																																																																														1
ATCTAT	22	4	2																																																																												28
ATCTCA	1																																																																														1
ATCTCT	1																																																																														1
ATCTTA		1																																																																													1
ATCTTG	1																																																																														1
ATCTTT	1	1																																																																													2
ATGAAA	12	3																																																																													15
ATGACA	1																																																																														1
ATGATA	5	1																																																																													6
ATGATC	1																																																																														1
ATGATT	2																																																																														2
ATGCAT	1																																																																														1
ATGCCT	1																																																																														1
ATGGTA	1																																																																														1
ATGTAA	1																																																																														1
ATGTCA	1			1																																																																											2
ATGTCT					1																																																																										1
ATGTTT	2																																																																														2
ATTAAA	6																																																																														6
ATTAAC	1																																																																														1
ATTAAG	1																																																																														1
ATTAAT	2																																																																														2
ATTACA	1																																																																														1
ATTACT	1																																																																														1
ATTAGA	1																																																																														1
ATTAGT	1																																																																														1
ATTATA	9																																																																														9
ATTATG	1																																																																														1
ATTCAA	3	1																																																																													4
ATTCGA	1																																																																														1
ATTCGC		1																																																																													1
ATTCGT	2																																																																														2
ATTCTC	5																																																																														5
ATTCTG	1	1																																																																													2
ATTGAA	1	1	1																																																																												3
ATTGAC	1																																																																														1
ATTGAT	1																																																																														1
ATTGCA	1																																																																														1
ATTGCT	1																																																																														1
ATTGTA	1																																																																														1
ATTTAA	2																																																																														2
ATTTAT	2																																																																														2
ATTTCA	1																																																																														1
ATTTCT	1																																																																														1
ATTTGA	1																																																																														1
ATTTGT	1																																																																														1
ATTTTA	8	1																																																																													9
ATTTTC	17	1							1																																																																						19
ATTTTG	15	3	1		1																																																																										20
ATTTTT	14		1							1																																																																					16
CAAAAT	5																																																																														5
CAAAGT	3	1																																																																													4
CAAATA	1																																																																														1
CAAATT	4	1																																																																													5
CAAGAA	1																																																																														1
CAAGCT	1																																																																														1
CAATAC	1																																																																														1
CAATAG	1																																																																														1
CAATAT	1																																																																														1
CAATTT	1																																																																														1
CACACG	2	1																																																																													3
CACATA	1																																																																														1
CACCAA	1																																																																														1
CACCAT	1																																																																														1
CACGTT	1																																																																														1
CACTGA	1																																																																														1
CACTTG	1																																																																														1
CAGAAA	1																																																																														1
CAGAAC	1	1																																																																													2
CAGAAT	2																																																																														2
CAGCCG	2																																																																														2
CAGCGA	1																																																																														1
CAGTAA	1																																																																														1
CATAAT	1																																																																														1
CATACA	1																																																																														1
CATAGA				1																																																																											1
CATAGT	1																																																																														1
CATCAC	1																																																																														1
CATCAG	2																																																																														2
CATCCC	1																																																																														1
CATCTT	1																																																																														1
CATGAA	1																																																																														1
CATTAT	1																																																																														1
CATTCA	2																																																																														2
CATTCG	1																																																																														1
CATTCT		1	1																																																																												2
CATTGA	1																																																																														1
CATTTA	2																																																																														2
CATTTT	53	5	1				1																																																																								60
CCAACA		1																																																																													1
CCATTA	1																																																																														1
CCCGCA		1																																																																													1
CCCGTG	1																																																																														1
CCCGTT	1																																																																														1
CCGCGG	1																																																																														1
CCTATG	1																																																																														1
CCTATT	1																																																																														1
CCTCAC			1																																																																												1
CCTCCG	1																																																																														1
CCTCGT	1																																																																														1
CCTTTA	1																																																																														1
CGAAAC	1																																																																														1
CGACGC	1																																																																														1
CGACTG		1																																																																													1
CGATAC	1																																																																														1
CGATGG	1																																																																														1
CGATTT	1																																																																														1
CGCACA	1																																																																														1
CGCACC		1																																																																													1
CGCAGT	1																																																																														1
CGCCAC	1																																																																														1
CGCCCA	1																																																																														1
CGCGCC	1																																																																														1
CGGAGG	1																																																																														1
CGGATA	1																																																																														1
CGGATG	1																																																																														1
CGGCGT	1																																																																														1
CGGTTG		1																																																																													1
CGTAAA	1																																																																														1
CGTTAT	1																																																																														1
CGTTCT							1																																																																								1
CTAATA	1																																																																														1
CTACAG	1																																																																														1
CTAGAT	1																																																																														1
CTAGGC	1																																																																														1
CTAGGT	1																																																																														1
CTATCA	2																																																																														2
CTATCG	1																																																																														1
CTATTA	3																																																																														3
CTATTT	5	1																																																																													6
CTCACA	1																																																																														1
CTCACC		1																																																																													1
CTCACT	1																																																																														1
CTCGCA	1																																																																														1
CTCGTG	1																																																																														1
CTCTCA	1																																																																														1
CTCTGT	1																																																																														1
CTCTTA	1																																																																														1
CTCTTT						1																																																																									1
CTGCGG	2																																																																														2
CTGGTA	1																																																																														1
CTGTAA	1																																																																														1
CTGTAG	1																																																																														1
CTGTAT		1																																																																													1
CTGTCA	1																																																																														1
CTGTTA	1																																																																														1
CTTAAT	1																																																																														1
CTTAGG	1																																																																														1
CTTAGT	1																																																																														1
CTTATA	2																																																																														2
CTTCGT	1																																																																														1
CTTCTA	1																																																																														1
CTTGAA	1																																																																														1
CTTTAA	1																																																																														1
CTTTAC	1																																																																														1
CTTTAT	2																																																																														2
CTTTCA	1																																																																														1
CTTTCC									1																																																																						1
CTTTTA	1																																																																														1
CTTTTC	1																																																																														1
CTTTTT	1																																																																														1
GAAAAG	2																																																																														2
GAAAAT	13																																																																														13
GAAAGG	1																																																																														1
GAAATG		1																																																																													1
GAAATT	1																																																																														1
GAACTG	1																																																																														1
GAAGAT	4	1																																																																													5
GAAGGT	1																																																																														1
GAAGTT	1																																																																														1
GAATAT	6																																																																														6
GAATTC	1																																																																														1
GAATTT	3																																																																														3
GACAGG	1																																																																														1
GACCGC		1																																																																													1
GACGAA	2																																																																														2
GACGAT	1																																																																														1
GACTAA	1																																																																														1
GACTTT	1																																																																														1
GAGAAG	1																																																																														1
GAGAAT	1																																																																														1
GAGACT	1																																																																														1
GAGAGT	1																																																																														1
GAGATA	1																																																																														1
GAGTGG	1																																																																														1
GAGTTC	2																																																																														2
GATCAC	1																																																																														1
GATGAA	2																																																																														2
GATGAC	1																																																																														1
GATGTA	1																																																																														1
GATGTG	1																																																																														1
GATTAT	3																																																																														3
GATTCT	1																																																																														1
GATTTC	1																																																																														1
GATTTT	2	1																																																																													3
GCAGGC	1																																																																														1
GCCAAC	1																																																																														1
GCCATA	1																																																																														1
GCCCAC	1																																																																														1
GCGAAT		3																																																																													3
GCGCAG	1																																																																														1
GCGGAG	1																																																																														1
GCGGCT		1																																																																													1
GCGGGC	2																																																																														2
GCGTGG	1																																																																														1
GCTAGT	1																																																																														1
GCTGAG	1																																																																														1
GCTGCG	2																																																																														2
GCTTGG	1																																																																														1
GGAAAT	1																																																																														1
GGAACC	1																																																																														1
GGAGAC	1																																																																														1
GGAGCG	1																																																																														1
GGAGGC	1																																																																														1
GGATTT	1	1																																																																													2
GGCACC	1																																																																														1
GGCGCG	1																																																																														1
GGCTAG	1																																																																														1
GGCTGC					1																																																																										1
GGCTTC	1																																																																														1
GGGAGT	1																																																																														1
GGGGCG	1																																																																														1
GGGGGA	1																																																																														1
GGGGGC	1																																																																														1
GGGGGT	1																																																																														1
GGGTAA	1																																																																														1
GGGTTG	1																																																																														1
GGTATA	1																																																																														1
GGTCCT	1																																																																														1
GGTCTA	1																																																																														1
GGTGCG	1																																																																														1
GGTGTC			1																																																																												1
GTAAAG	1																																																																														1
GTAATA	2																																																																														2
GTAATT	1																																																																														1
GTACAA	1																																																																														1
GTACTG	1																																																																														1
GTAGTT	1																																																																														1
GTATAG	1																																																																														1
GTATTA	1																																																																														1
GTCAAA	8																																																																														8
GTCAAC	1																																																																														1
GTCAAT	1																																																																														1
GTCACG	1																																																																														1
GTCACT	1																																																																														1
GTCAGA	1																																																																														1
GTCAGT	1																																																																														1
GTCATT	1																																																																														1
GTCGAG	1																																																																														1
GTCGAT		1																																																																													1
GTCGCT	1																																																																														1
GTCGTG	1																																																																														1
GTCTGC	1																																																																														1
GTCTGT	1																																																																														1
GTCTTG	1	1																																																																													2
GTGAAA	1																																																																														1
GTGACA	1																																																																														1
GTGACT	1																																																																														1
GTGATA	1																																																																														1
GTGCGC		1																																																																													1
GTGCGT	2																																																																														2
GTGCTG	1																																																																														1
GTGGAC	1																																																																														1
GTGGGC	2	1																																																																													3
GTGTAT	1																																																																														1
GTGTCA	3																																																																														3
GTGTGC	3	1	1																																																																												5
GTTAAA	1																																																																														1
GTTACT	1																																																																														1
GTTAGA	1																																																																														1
GTTATG	1																																																																														1
GTTCCA	1																																																																														1
GTTCTG	1																																																																														1
GTTGAC	1																																																																														1
GTTGGT		1																																																																													1
GTTTAA	4																																																																														4
GTTTAC	1																																																																														1
GTTTCA	1																																																																														1
GTTTCT	1																																																																														1
TAAAAA	11																																																																														11
TAAAAC	1																																																																														1
TAAAAG	1																																																																														1
TAAAAT	4																																																																														4
TAAACA	2																																																																														2
TAAATA	4		1																																																																												5
TAAATG	1																																																																														1
TAAATT	7																																																																														7
TAACGT	1																																																																														1
TAACTA	2																																																																														2
TAACTC	1																																																																														1
TAAGAC	1																																																																														1
TAAGCA	1																																																																														1
TAATAT	3				1																																																																										4
TAATCC	1																																																																														1
TAATGG	1																																																																														1
TAATTA	2																																																																														2
TAATTC	1																																																																														1
TAATTT	4																																																																														4
TACAAA	2																																																																														2
TACAAC	1																																																																														1
TACATA	1																																																																														1
TACATG	2																																																																														2
TACCAC	1																																																																														1
TACCAT	2																																																																														2
TACCTA	3																																																																														3
TACGAA	3																																																																														3
TACTAA	1																																																																														1
TACTCG	1																																																																														1
TACTGT	1																																																																														1
TACTTT	1																																																																														1
TAGAAA	3																																																																														3
TAGAAG	1																																																																														1
TAGATA	4	1																																																																													5
TAGCAA	1																																																																														1
TAGCAG	2																																																																														2
TAGCAT	1																																																																														1
TAGCCT	1																																																																														1
TAGGAC	1																																																																														1
TAGGTA	3																																																																														3
TAGTCG	1																																																																														1
TAGTTA	3																																																																														3
TAGTTC	2																																																																														2
TAGTTT	1																																																																														1
TATAAA	4																																																																														4
TATAAG	1		1					1																																																																							3
TATAAT	2	1																																																																													3
TATACA	2																																																																														2
TATACC	1																																																																														1
TATACT	1																																																																														1
TATAGA	31	1	2																																																																												34
TATATC	2	1	1				1																																																																								5
TATATG	3																																																																														3
TATATT	2																																																																														2
TATCAC	1																																																																														1
TATCAG	1																																																																														1
TATCAT	2																																																																														2
TATCCG	1																																																																														1
TATCCT											1																																																																				1
TATCGA	2																																																																														2
TATCTA	9	1	1																																																																												11
TATCTT	1																																																																														1
TATGAA	3																																																																														3
TATGAC	1																																																																														1
TATGAT	1																																																																														1
TATGGC	1																																																																														1
TATGGT	1																																																																														1
TATGTA	1																																																																														1
TATGTC			1																																																																												1
TATGTG	3																																																																														3
TATGTT	1																																																																														1
TATTAA	2																																																																														2
TATTAC	1																																																																														1
TATTAG	2																																																																														2
TATTCA	2																																																																														2
TATTGA	2																																																																														2
TATTTA	5																																																																														5
TATTTC	4																																																																														4
TATTTT	21																																																																														21
TCAAAA	9																																																																														9
TCAAAG	3																																																																														3
TCAAAT	3										1																																																																				4
TCAATA	2																																																																														2
TCAATG	1																																																																														1
TCAATT	1																																																																														1
TCACAG	1																																																																														1
TCACAT	1																																																																														1
TCACGA	1																																																																														1
TCACTA	1																																																																														1
TCAGAA	2	1																																																																													3
TCAGAG	1																																																																														1
TCATAT	1																																																																														1
TCATCC	1																																																																														1
TCATCG	1																																																																														1
TCATCT	1																																																																														1
TCATGC	1																																																																														1
TCATTA	4																																																																														4
TCATTC							1																																																																								1
TCATTT	5			1																																																																											6
TCCAAA	1																																																																														1
TCCATA	1																																																																														1
TCCCGT	1																																																																														1
TCCCTA	1																																																																														1
TCCGAC	1																																																																														1
TCCGTA	1																																																																														1
TCGACA	1																																																																														1
TCGCTG	1																																																																														1
TCGGGC			1																																																																												1
TCGTCA	2																																																																														2
TCTAAA		1																																																																													1
TCTAAG	2																																																																														2
TCTAAT	1																																																																														1
TCTATA	7			1																																																																											8
TCTATC	1																																																																														1
TCTATT	1										1																																																																				2
TCTCAT	1																																																																														1
TCTCCC	1																																																																														1
TCTGAG	1																																																																														1
TCTGAT	1																																																																														1
TCTGTA	1																																																																														1
TCTGTG	1																																																																														1
TCTGTT				1																																																																											1
TCTTAG	1																																																																														1
TCTTCC	2																																																																														2
TCTTTA	2																																																																														2
TCTTTC	1																																																																														1
TCTTTT	1																																																																														1
TGAAAA	22	4																																																																													26
TGAAAT	1																																																																														1
TGAAGA	2																																																																														2
TGAATC	1																																																																														1
TGAATT	1																																																																														1
TGACAG	1																																																																														1
TGACAT	1																																																																														1
TGACGA	1																																																																														1
TGAGAA			1																																																																												1
TGAGAC	1																																																																														1
TGAGCT	1																																																																														1
TGAGTA	1																																																																														1
TGATAA	2		1																																																																												3
TGATAC	1																																																																														1
TGATAG	1																																																																														1
TGATAT	1																																																																														1
TGATCA	1																																																																														1
TGATGG	2																																																																														2
TGATGT	1																																																																														1
TGATTA	2																																																																														2
TGATTC	2	1																																																																													3
TGATTT	9	8	3																																																																												20
TGCAAT	1																																																																														1
TGCATG	1																																																																														1
TGCCAT	1																																																																														1
TGCCGT	1																																																																														1
TGCGAG	1																																																																														1
TGCGGA	1																																																																														1
TGGAAA	1																																																																														1
TGGAAT	1																																																																														1
TGGATA	1																																																																														1
TGGATT	1																																																																														1
TGGCAA	1																																																																														1
TGGTAA	1																																																																														1
TGGTGA	1																																																																														1
TGTAGA	1																																																																														1
TGTATG	1																																																																														1
TGTCAC	1																																																																														1
TGTCAG	1																																																																														1
TGTCAT		1																																																																													1
TGTCTC						1																																																																									1
TGTGAA	2																																																																														2
TGTGCT	1																																																																														1
TGTGGA	2																																																																														2
TGTTAA	1																																																																														1
TGTTCA	3																																																																														3
TGTTGA	1																																																																														1
TGTTGG				1																																																																											1
TGTTTT	1																																																																														1
TTAAAA	8																																																																														8
TTAAAT	1																																																																														1
TTAAGA	1																																																																														1
TTAATA	1																																																																														1
TTAATG	1																																																																														1
TTAATT	3																																																																														3
TTACAG	1																																																																														1
TTACAT	2																																																																														2
TTACTA	1																																																																														1
TTACTT	1			1																																																																											2
TTAGAA	4																																																																														4
TTAGAC	2																																																																														2
TTAGGT	1																																																																														1
TTAGTA	1																																																																														1
TTATAA	3																																																																														3
TTATAG	2																																																																														2
TTATAT	2																																																																														2
TTATCA	2																																																																														2
TTATTC	1																																																																														1
TTATTG	1																																																																														1
TTATTT	11		1																																																																												12
TTCAAA	1																																																																														1
TTCAAT	3																																																																														3
TTCACA	1																																																																														1
TTCAGA	1																																																																														1
TTCATA		1																																																																													1
TTCATT	5																																																																														5
TTCCTA	1																																																																														1
TTCGGT	2																																																																														2
TTCGTG	2																																																																														2
TTCTAG	1																																																																														1
TTCTAT	2																																																																														2
TTCTCA	1																																																																														1
TTCTGA	1	1																																																																													2
TTCTTA	2																																																																														2
TTCTTG	1																																																																														1
TTGAAA	1																																																																														1
TTGACA	1																																																																														1
TTGAGA	2	1																																																																													3
TTGATA	1																																																																														1
TTGATG	1																																																																														1
TTGATT	1	2																																																																													3
TTGCAT	1																																																																														1
TTGCTG		1																																																																													1
TTGGTG	1																																																																														1
TTGTAA	1																																																																														1
TTGTAT	1																																																																														1
TTGTCA	2																																																																														2
TTGTTT	2																																																																														2
TTTAAA	6																																																																														6
TTTAAG	2																																																																														2
TTTAAT	5																																																																														5
TTTACA	2																																																																														2
TTTACG	1																																																																														1
TTTACT	1																																																																														1
TTTATA	2	2																																																																													4
TTTATC	1																																																																														1
TTTATG	1																																																																														1
TTTATT	16																																																																														16
TTTCAA	1																																																																														1
TTTCAG	1																																																																														1
TTTCAT	5	1																																																																													6
TTTCCT	1																																																																														1
TTTCGA	2																																																																														2
TTTCGG	1																																																																														1
TTTCTC	2			1																																																																											3
TTTCTG	1																																																																														1
TTTCTT	7		1		1																																																																										9
TTTGAA	14	3																																																																													17
TTTGAC	38	5																																																																													43
TTTGAT	2	1																																																																													3
TTTGTA	1																																																																														1
TTTGTC	1																																																																														1
TTTGTT	2																																																																														2
TTTTAA	8	1																																																																													9
TTTTAC	5																																																																														5
TTTTAT	12																																																																														12
TTTTCA	10	3	1					1		1																																																																					16
TTTTCG	2																																																																														2
TTTTCT	3	1			1																																																																										5
TTTTGA	2			1		1	1																																																																								5
TTTTGT	1																																																																														1
TTTTTA	16	2		1																																																																											19
TTTTTC	6	1	2		1		1																																																																								11
TTTTTG	2																																																																														2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	32	22	19	18	11	9	6	4	8	5	2	5	2	4	1	3	2	2		2			1	1		2	2		1	4	3	5	1	3	3	1	2	2	3		3	1	4			2			2		1	1	3	3	5	7	4	4			1	232
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	20	21	18	12	13	12	11	16	11	9	7	6	12	6	10	7	6	6	2	6	2	6	3	6	4	3	4	6		3	1	1					4		1									1		1						2					278
AC/GT	-	-	-	595	258	179	106	53	34	27	18	9	10	11	9	2	4	4	4	4	4	3	3	2	1	2	2	5		2	1	1	2	1	3			1																																									1360
AG/CT	-	-	-	290	165	95	53	23	19	7	10	3	4	3	2	2			1											1		1																																															679
AT/AT	-	-	-	655	253	147	85	47	24	13	12	9	5	3	3	1	1	1				1																																																									1260
CG/CG	-	-	-	11	3	1																																																																									15
AAC/GTT	-	-	37	9	5	2	1	1																																																																							55
AAG/CTT	-	-	136	45	14	8	2		2	1		1																																																																			209
AAT/ATT	-	-	1719	580	149	43	23	10	3	3																																																																					2530
ACC/GGT	-	-	21	6	3	1																																																																									31
ACG/CGT	-	-	12	6	1	1																																																																									20
ACT/AGT	-	-	94	26	12	2		5				1																																																																			140
AGC/CTG	-	-	23	6	2	4	1		1																																																																						37
AGG/CCT	-	-	17	1	1	3																																																																									22
ATC/ATG	-	-	1842	1255	649	308	126	53	26	28	13	12	7	4	1	1	1						1		1																																																						4328
CCG/CGG	-	-	30	5	5																																																																										40
AAAC/GTTT	-	200	53	11	6	4	1	1		2	2			1																																																																	281
AAAG/CTTT	-	108	39	16	8	9	5	1	1		2	4	1	1			4	1																																																													200
AAAT/ATTT	-	2434	657	200	100	44	27	43	18	12	5	6	4	1	2	4	5																																																														3562
AACC/GGTT	-	20	3																																																																												23
AACG/CGTT	-	19	6	2		2		1																																																																							30
AACT/AGTT	-	26	2																																																																												28
AAGC/CTTG	-	14	2	1																																																																											17
AAGG/CCTT	-	29	8			2						1																																																																			40
AAGT/ACTT	-	120	28	10	3	2	1		1	3		1						1																																																													170
AATC/ATTG	-	91	36	15	2	3	3	1		1	1			1				1																																																													155
AATG/ATTC	-	168	40	22	9	6	3	2			2		1				1																																																														254
AATT/AATT	-	174	25	7	1																																																																										207
ACAG/CTGT	-	161	55	22	14	6	9	6	3	2	2		2	3		1	1			1																																																											288
ACAT/ATGT	-	319	60	25	10	8	4		4	3		1			1																																																																435
ACCG/CGGT	-	2	1																																																																												3
ACCT/AGGT	-	459	62	18	9	2	1	1																																																																							552
ACGC/CGTG	-	18	5	3	1		2																																																																								29
ACGG/CCGT	-	18	2	2																																																																											22
ACGT/ACGT	-	14	2	2																																																																											18
ACTC/AGTG	-	41	19	4	4	2	4	2	1	2																																																																					79
ACTG/AGTC	-	74	26	6	5	2	1	2		2		3	1		1	1		2																																																													126
AGAT/ATCT	-	116	34	4	3	5	2	1			1	2	1		2																																																																171
AGCC/CTGG	-	4	2																																																																												6
AGCG/CGCT	-	4		1																																																																											5
AGCT/AGCT	-	7	2																																																																												9
AGGC/CCTG	-	5	2		1																																																																										8
AGGG/CCCT	-	2		1																																																																											3
ATCC/ATGG	-	143	42	13	2	1		1				2		1																																																																	205
ATCG/ATCG	-	10																																																																													10
ATGC/ATGC	-	10	3																																																																												13
CCCG/CGGG	-	3																																																																													3
AAAAC/GTTTT	166	8	1																																																																												175
AAAAG/CTTTT	153	10	4	1		1						1																																																																			170
AAAAT/ATTTT	1503	75	12	1	2	2						1	1																																																																		1597
AAACC/GGTTT	34	1	1																																																																												36
AAACG/CGTTT	27	2	1		1																																																																										31
AAACT/AGTTT	104	7	2																																																																												113
AAAGC/CTTTG	27																																																																														27
AAAGG/CCTTT	28	3																																																																													31
AAAGT/ACTTT	88	10		1																																																																											99
AAATC/ATTTG	330	91	15	1																																																																											437
AAATG/ATTTC	308	62	20	5	1	4	1	1					1																																																																		403
AAATT/AATTT	666	44	4																																																																												714
AACAC/GTGTT	75	3	3	2	1	3	1	3	2	3	3	1	8																																																																		108
AACAG/CTGTT	29	1																																																																													30
AACAT/ATGTT	87	6	2		1																																																																										96
AACCC/GGGTT	6																																																																														6
AACCG/CGGTT	5																																																																														5
AACCT/AGGTT	290	40	22	25	13	19	11	29	26	22	20	36	58																																																																		611
AACGC/CGTTG	10						1					1																																																																			12
AACGG/CCGTT	5	2				1																																																																									8
AACGT/ACGTT	50	3																																																																													53
AACTC/AGTTG	25	4																																																																													29
AACTG/AGTTC	47	1																																																																													48
AACTT/AAGTT	49	5																																																																													54
AAGAC/CTTGT	44	5	1																																																																												50
AAGAG/CTCTT	41	3																																																																													44
AAGAT/ATCTT	97	10	3		1							1	1																																																																		113
AAGCC/CTTGG	7																																																																														7
AAGCG/CGCTT	4																																																																														4
AAGCT/AGCTT	30	3																																																																													33
AAGGC/CCTTG	15	2																																																																													17
AAGGG/CCCTT	4	1																																																																													5
AAGGT/ACCTT	86	9	1				1																																																																								97
AAGTC/ACTTG	58	11	2																																																																												71
AAGTG/ACTTC	46	4																																																																													50
AATAC/ATTGT	165	13	1																																																																												179
AATAG/ATTCT	83	9	2																																																																												94
AATAT/ATATT	514	17	2	2		2																																																																									537
AATCC/ATTGG	19	2																																																																													21
AATCG/ATTCG	29	1																																																																													30
AATCT/AGATT	89	6																																																																													95
AATGC/ATTGC	37		1																																																																												38
AATGG/ATTCC	35	3		2	2		1	1																																																																							44
AATGT/ACATT	201	15	2																																																																												218
AATTC/AATTG	184	24	4	2																																																																											214
ACACC/GGTGT	16	4			1																																																																										21
ACACG/CGTGT	24	3	1	1																																																																											29
ACACT/AGTGT	65	6	3	2									1																																																																		77
ACAGC/CTGTG	24	1																																																																													25
ACAGG/CCTGT	11																																																																														11
ACAGT/ACTGT	50	8	1		1																																																																										60
ACATC/ATGTG	53	2	2																																																																												57
ACATG/ATGTC	90	4	1	2																																																																											97
ACCAG/CTGGT	8	1		1																																																																											10
ACCAT/ATGGT	32	3																																																																													35
ACCCC/GGGGT	1																																																																														1
ACCCG/CGGGT	4																																																																														4
ACCCT/AGGGT	10	4																																																																													14
ACCGC/CGGTG	9																																																																														9
ACCGG/CCGGT		1																																																																													1
ACCGT/ACGGT	9	1																																																																													10
ACCTC/AGGTG	29	6		3																																																																											38
ACCTG/AGGTC	11																																																																														11
ACGAG/CGTCT	10																																																																														10
ACGAT/ATCGT	46	4	1											1																																																																	52
ACGCC/CGTGG	7	1																																																																													8
ACGCG/CGCGT	13	1		1																																																																											15
ACGCT/AGCGT	9																																																																														9
ACGGC/CCGTG	5																																																																														5
ACGGG/CCCGT	1					1																																																																									2
ACGTC/ACGTG	41	3	1																																																																												45
ACTAG/AGTCT	40	3																																																																													43
ACTAT/AGTAT	127	7	2	1																																																																											137
ACTCC/AGTGG	22	6	3																																																																												31
ACTCG/AGTCG	8	2																																																																													10
ACTCT/AGAGT	27	4																																																																													31
ACTGC/AGTGC	14	2	2	3																																																																											21
ACTGG/AGTCC	15																																																																														15
AGAGC/CTCTG	7																																																																														7
AGAGG/CCTCT	25	1																																																																													26
AGATC/ATCTG	33	2																																																																													35
AGATG/ATCTC	23	5																																																																													28
AGCAT/ATGCT	27	2																																																																													29
AGCCC/CTGGG	2																																																																														2
AGCCG/CGGCT	1																																																																														1
AGCCT/AGGCT	11	3																																																																													14
AGCGC/CGCTG	2																																																																														2
AGCGG/CCGCT	5																																																																														5
AGCTC/AGCTG	12	1																																																																													13
AGGAT/ATCCT	38	2		1																																																																											41
AGGCC/CCTGG	8																																																																														8
AGGCG/CCTCG	4	1																																																																													5
AGGGC/CCCTG	1																																																																														1
AGGGG/CCCCT	8																																																																														8
ATATC/ATATG	51	3																																																																													54
ATCCC/ATGGG	16	1																																																																													17
ATCCG/ATCGG	6	2																																																																													8
ATCGC/ATGCG	6		1																																																																												7
ATGCC/ATGGC	16	2																																																																													18
CCCCG/CGGGG	3	1																																																																													4
CCGCG/CGCGG	23																																																																														23
AAAAAC/GTTTTT	13	1																																																																													14
AAAAAG/CTTTTT	21	3	3		3		1																																																																								31
AAAAAT/ATTTTT	170	3	2	1						1																																																																					177
AAAACG/CGTTTT	2																																																																														2
AAAACT/AGTTTT	5																																																																														5
AAAAGC/CTTTTG	1																																																																														1
AAAAGG/CCTTTT	4																																																																														4
AAAAGT/ACTTTT	14			1																																																																											15
AAAATC/ATTTTG	61	20	5	1	1	1	1																																																																								90
AAAATG/ATTTTC	179	20	3	1	2		1	1	1	3																																																																					211
AAAATT/AATTTT	64	2																																																																													66
AAACAG/CTGTTT	5			1																																																																											6
AAACAT/ATGTTT	7																																																																														7
AAACCC/GGGTTT	1																																																																														1
AAACCG/CGGTTT	8																																																																														8
AAACCT/AGGTTT	2																																																																														2
AAACGT/ACGTTT	6		1																																																																												7
AAACTG/AGTTTC	4																																																																														4
AAACTT/AAGTTT	9																																																																														9
AAAGAC/CTTTGT	2																																																																														2
AAAGAG/CTCTTT	5			1		1																																																																									7
AAAGAT/ATCTTT	11	1																																																																													12
AAAGCT/AGCTTT	1																																																																														1
AAAGGC/CCTTTG	1																																																																														1
AAAGGG/CCCTTT	1								1																																																																						2
AAAGGT/ACCTTT	4																																																																														4
AAAGTC/ACTTTG	71	9																																																																													80
AAAGTG/ACTTTC	2																																																																														2
AAAGTT/AACTTT	4																																																																														4
AAATAC/ATTTGT	8																																																																														8
AAATAG/ATTTCT	19	1	1								1																																																																				22
AAATAT/ATATTT	40	3	1																																																																												44
AAATCC/ATTTGG	3	1																																																																													4
AAATCG/ATTTCG	7																																																																														7
AAATCT/AGATTT	4	1	1																																																																												6
AAATGC/ATTTGC	1																																																																														1
AAATGG/ATTTCC	4	1																																																																													5
AAATGT/ACATTT	12	1																																																																													13
AAATTC/AATTTG	41	8		1							1																																																																				51
AAATTG/AATTTC	13	1	1																																																																												15
AAATTT/AAATTT	29																																																																														29
AACAAG/CTTGTT	3																																																																														3
AACAAT/ATTGTT	2																																																																														2
AACACC/GGTGTT	3	2		1																																																																											6
AACACG/CGTGTT	2																																																																														2
AACACT/AGTGTT	2																																																																														2
AACAGC/CTGTTG		1																																																																													1
AACAGG/CCTGTT	2																																																																														2
AACAGT/ACTGTT	5																																																																														5
AACATC/ATGTTG	5																																																																														5
AACATG/ATGTTC	4																																																																														4
AACATT/AATGTT	5																																																																														5
AACCAG/CTGGTT	2	1																																																																													3
AACCAT/ATGGTT	3																																																																														3
AACCCC/GGGGTT	1																																																																														1
AACCGC/CGGTTG		1																																																																													1
AACCGG/CCGGTT	1																																																																														1
AACCGT/ACGGTT	1																																																																														1
AACCTG/AGGTTC	2																																																																														2
AACGAG/CGTTCT							1																																																																								1
AACGAT/ATCGTT	1																																																																														1
AACGCC/CGTTGG	1																																																																														1
AACGGC/CCGTTG	1																																																																														1
AACGGG/CCCGTT	2																																																																														2
AACGTC/ACGTTG	2																																																																														2
AACGTG/ACGTTC	1																																																																														1
AACGTT/AACGTT	1																																																																														1
AACTAC/AGTTGT	3	1																																																																													4
AACTAG/AGTTCT	5																																																																														5
AACTAT/AGTTAT	9	1																																																																													10
AACTCG/AGTTCG	3																																																																														3
AACTCT/AGAGTT	3																																																																														3
AACTGG/AGTTCC	2																																																																														2
AACTGT/ACAGTT	5																																																																														5
AACTTC/AAGTTG	2																																																																														2
AACTTG/AAGTTC	2																																																																														2
AAGAAT/ATTCTT	7	1																																																																													8
AAGACC/CTTGGT	1	1																																																																													2
AAGACG/CGTCTT	3																																																																														3
AAGACT/AGTCTT	6																																																																														6
AAGAGG/CCTCTT	3																																																																														3
AAGAGT/ACTCTT	3																																																																														3
AAGATC/ATCTTG	1																																																																														1
AAGATG/ATCTTC	11	2																																																																													13
AAGATT/AATCTT	4	2																																																																													6
AAGCAC/CTTGTG	1																																																																														1
AAGCAG/CTGCTT	1																																																																														1
AAGCAT/ATGCTT	1																																																																														1
AAGCCC/CTTGGG	1																																																																														1
AAGCCG/CGGCTT	1																																																																														1
AAGCCT/AGGCTT	2																																																																														2
AAGCGG/CCGCTT	1																																																																														1
AAGCTC/AGCTTG	2																																																																														2
AAGCTT/AAGCTT	1																																																																														1
AAGGAG/CCTTCT	1																																																																														1
AAGGAT/ATCCTT	1										1																																																																				2
AAGGCT/AGCCTT	1																																																																														1
AAGGGT/ACCCTT	1																																																																														1
AAGGTG/ACCTTC	1																																																																														1
AAGTAC/ACTTGT	1																																																																														1
AAGTAG/ACTTCT	3	1																																																																													4
AAGTAT/ACTTAT	5	1	1					1			1																																																																				9
AAGTCG/ACTTCG	1																																																																														1
AAGTCT/ACTTAG	4																																																																														4
AAGTGC/ACTTGC	1																																																																														1
AAGTGG/ACTTCC	2	1																																																																													3
AAGTGT/ACACTT	3																																																																														3
AATACC/ATTGGT	2																																																																														2
AATACG/ATTCGT	5																																																																														5
AATACT/AGTATT	13	1	1	1																																																																											16
AATAGC/ATTGCT	3																																																																														3
AATAGG/ATTCCT	2																																																																														2
AATAGT/ACTATT	10																																																																														10
AATATC/ATATTG	10																																																																														10
AATATG/ATATTC	15	1																	2																																																												18
AATATT/AATATT	11				1																																																																										12
AATCAC/ATTGTG	1																																																																														1
AATCAG/ATTCTG	10	4																																																																													14
AATCAT/ATGATT	11																																																																														11
AATCCT/AGGATT	2																																																																														2
AATCGT/ACGATT	2																																																																														2
AATCTC/AGATTG	3	1																																																																													4
AATCTG/AGATTC	2																																																																														2
AATGAC/ATTGTC	5	1																																																																													6
AATGAG/ATTCTC	8	1	2		1		1																																																																								13
AATGAT/ATCATT	18	2	1																																																																												21
AATGCG/ATTCGC	1	4																																																																													5
AATGCT/AGCATT	1																																																																														1
AATGGC/ATTGCC	2																																																																														2
AATGGT/ACCATT	6																																																																														6
AATGTC/ACATTG	9			1																																																																											10
AATGTG/ACATTC	6																																																																														6
AATTAC/AATTGT	5																																																																														5
AATTAG/AATTCT	9																																																																														9
AATTAT/AATTAT	22	1																																																																													23
AATTCC/AATTGG	2																																																																														2
AATTCG/AATTCG	2																																																																														2
AATTGC/AATTGC	3																																																																														3
ACACAG/CTGTGT	2																																																																														2
ACACAT/ATGTGT	10																																																																														10
ACACCG/CGGTGT			1																																																																												1
ACACCT/AGGTGT	2																																																																														2
ACACGC/CGTGTG	8	2	1																																																																												11
ACACTC/AGTGTG	1																																																																														1
ACACTG/AGTGTC	8																																																																														8
ACAGAG/CTCTGT	2					1																																																																									3
ACAGAT/ATCTGT	2	1																																																																													3
ACAGCG/CGCTGT	3																																																																														3
ACAGCT/AGCTGT	3																																																																														3
ACAGGG/CCCTGT	1																																																																														1
ACAGGT/ACCTGT	1																																																																														1
ACAGTC/ACTGTG	2																																																																														2
ACAGTG/ACTGTC	6																																																																														6
ACATAG/ATGTCT			1	1	1																																																																										3
ACATAT/ATATGT	13	1																																																																													14
ACATCC/ATGTGG	3																																																																														3
ACATCG/ATGTCG	1	1																																																																													2
ACATCT/AGATGT	3																																																																														3
ACATGC/ATGTGC	2																																																																														2
ACATGT/ACATGT	2																																																																														2
ACCACG/CGTGGT	1																																																																														1
ACCACT/AGTGGT	1																																																																														1
ACCAGC/CTGGTG	1																																																																														1
ACCAGG/CCTGGT	1																																																																														1
ACCAGT/ACTGGT	3																																																																														3
ACCATC/ATGGTG	5																																																																														5
ACCCCC/GGGGGT	1																																																																														1
ACCCGC/CGGGTG	1	2																																																																													3
ACCCGT/ACGGGT	1																																																																														1
ACCCTC/AGGGTG	1	1	1																																																																												3
ACCGAT/ATCGGT	1																																																																														1
ACCGCC/CGGTGG	1																																																																														1
ACCGCG/CGCGGT		1																																																																													1
ACCGGC/CCGGTG	1																																																																														1
ACCGTG/ACGGTC	1																																																																														1
ACCTAG/AGGTCT	3																																																																														3
ACCTAT/AGGTAT	12																																																																														12
ACCTCG/AGGTCG	1																																																																														1
ACGACT/AGTCGT	1																																																																														1
ACGAGC/CGTGCT	1																																																																														1
ACGAGG/CCTCGT	1																																																																														1
ACGAGT/ACTCGT	2																																																																														2
ACGATC/ATCGTG	2																																																																														2
ACGATG/ATCGTC	6																																																																														6
ACGCAG/CGTCTG	2																																																																														2
ACGCCC/CGTGGG	5	1																																																																													6
ACGCCG/CGGCGT	2																																																																														2
ACGCGC/CGCGTG		1																																																																													1
ACGGAG/CCGTCT	1																																																																														1
ACGGAT/ATCCGT	3																																																																														3
ACGGGC/CCCGTG	1																																																																														1
ACGTAT/ACGTAT	1																																																																														1
ACGTCC/ACGTGG	1																																																																														1
ACTAGC/AGTGCT	1																																																																														1
ACTAGG/AGTCCT	1																																																																														1
ACTAGT/ACTAGT	1																																																																														1
ACTATC/AGTGAT	8																																																																														8
ACTATG/AGTCAT	2																																																																														2
ACTCAG/AGTCTG	1																																																																														1
ACTCAT/AGTATG	1																																																																														1
ACTCCC/AGTGGG	2																																																																														2
ACTCCG/AGTCGG	1																																																																														1
ACTCCT/AGGAGT	1																																																																														1
ACTCGC/AGTGCG	2																																																																														2
ACTCTC/AGAGTG	3																																																																														3
ACTCTG/AGAGTC	2																																																																														2
ACTGAG/AGTCTC	2																																																																														2
ACTGAT/AGTATC	3																																																																														3
ACTGCG/AGTCGC	1	1																																																																													2
ACTGCT/AGCAGT	2																																																																														2
ACTGGC/AGTGCC	1																																																																														1
AGAGAT/ATCTCT	3																																																																														3
AGAGCT/AGCTCT	1																																																																														1
AGAGGG/CCCTCT	2																																																																														2
AGATAT/ATATCT	83	10	10	1			1																																																																								105
AGATCT/AGATCT	1																																																																														1
AGCATC/ATGCTG	3																																																																														3
AGCATG/ATGCTC	1																																																																														1
AGCCAT/ATGGCT	2																																																																														2
AGCCCG/CGGGCT			1																																																																												1
AGCCCT/AGGGCT	1																																																																														1
AGCCGC/CGGCTG	6	1			1																																																																										8
AGCCTC/AGGCTG	1																																																																														1
AGCGAT/ATCGCT	1																																																																														1
AGCGGG/CCCGCT	1																																																																														1
AGGATG/ATCCTC	1																																																																														1
AGGCAT/ATGCCT	2																																																																														2
AGGCCT/AGGCCT	1																																																																														1
AGGCGC/CCTGCG	2																																																																														2
AGGCGG/CCGCCT	5																																																																														5
AGGGAT/ATCCCT	1																																																																														1
AGGGGG/CCCCCT	1																																																																														1
ATATCC/ATATGG	3																																																																														3
ATATCG/ATATCG	6																																																																														6
ATATGC/ATATGC	1																																																																														1
ATCATG/ATCATG	2																																																																														2
ATCCCC/ATGGGG	1																																																																														1
ATCCCG/ATCGGG	1																																																																														1
ATCCGC/ATGCGG	2																																																																														2
ATCGCC/ATGGCG	1																																																																														1
CCCCCG/CGGGGG	2																																																																														2
CCCGCG/CGCGGG	4																																																																														4
CCGCGG/CCGCGG	1																																																																														1
