Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-13/megassr/results/hub_GCA_013146165.1/fasta/hub_GCA_013146165.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              75
Total size of examined sequences (bp):           37598236
Total number of identified SSRs:                 3379
Number of SSR containing sequences:              61
Number of sequences containing more than 1 SSR:  56
Number of SSRs present in compound formation:    282


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	181
2	740
3	553
4	376
5	907
6	622

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	14	15	10	6	8	3	8	1	4	3		3			2	1	1						1		1	1	4				1													1	1				1																																																																							90
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	1	2							2																																					1													1																																																												10
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1	1					1																																																			1																																																													5
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	14	9	11	5	8	5	5	4	1		2	2		1			2	1										1					1									1							1																																																													1									1	76
AC	-	-	-	5	3	2	1	1			2			1	1			1																								1																																																																																															18
AG	-	-	-	32	17	13	6	5	2	3	1		1	2		1																																																																																																																									83
AT	-	-	-	86	29	12	11	12	4	3	2	2	2																																																																																																																												163
CA	-	-	-	13	2	1	3	1									1	1																																																																																																																							22
CG	-	-	-	1																																																																																																																																					1
CT	-	-	-	20	4	3	6	5	3	1	2	1	1	1	1																																																																																																																										48
GA	-	-	-	21	7	5	5	1	1	1		1	2						1																																																																																																																						45
GC	-	-	-	2		1																																																																																																																																			3
GT	-	-	-	12	6	3	2	4	2			1	1	1					1	1							1																																																																																																														35
TA	-	-	-	115	39	22	11	3	3	5	3	1	3			1																																																																																																																									206
TC	-	-	-	32	18	12	9	5	1	2	4			2		2							1																																																																																																																		88
TG	-	-	-	9	4	4	1		1	1	3		1	1			2								1																																																																																																																28
AAC	-	-	3	2	1																																																																																																																																				6
AAG	-	-	8	4	2	3		2			1		1				1		1					1																																																																																																																	24
AAT	-	-	17	8	5		1			1																																																																																																																															32
ACA	-	-	2	2	3	2																																																																																																																																			9
ACC	-	-	6	2																																																																																																																																					8
ACG	-	-		2																																																																																																																																					2
ACT	-	-	3	1						1																			1																																																																																																												6
AGA	-	-	9	2	1	1		1						1																																																																																																																											15
AGC	-	-	1	5	1	1																																																																																																																																			8
AGG	-	-	2	3	1																																																																																																																																				6
AGT	-	-	4	1	2	1				1															1													1																																																																																																			11
ATA	-	-	15	10	2	1	1												1																																																																																																																						30
ATC	-	-		1	1		1																																																																																																																																		3
ATG	-	-	5	2																																																																																																																																					7
ATT	-	-	7	5	2	1	1			1	1		1																																																																																																																												19
CAA	-	-	7	3	1	1																																																																																																																																			12
CAC	-	-	5	2	1																																																																																																																																				8
CAG	-	-	5	4	2																																																																																																																																				11
CAT	-	-	6	2		2								1																																																																																																																											11
CCA	-	-	3																																																																																																																																						3
CCG	-	-	1	1	1																																																																																																																																				3
CCT	-	-		1			1	1																																																																																																																																	3
CGA	-	-	3																																																																																																																																						3
CGC	-	-	2			1																																																																																																																																			3
CGG	-	-		1																																																																																																																																					1
CGT	-	-	1																																																																																																																																						1
CTA	-	-	3		1							1																																																																																																																													5
CTC	-	-	2	1	1					1																																																																																																																															5
CTG	-	-	5	1	1	1	1	1																																																																																																																																	10
CTT	-	-	16	7		1	1	3																			1																																																																																																														29
GAA	-	-	6	2	1	2	1	1																																																																																																																																	13
GAC	-	-	2		2																																																																																																																																				4
GAG	-	-	5	2		1				1																																																																																																																															9
GAT	-	-	3	1																																																																																																																																					4
GCA	-	-	4	4																																																																																																																																					8
GCC	-	-	6	2																																																																																																																																					8
GCG	-	-	4			1																																																																																																																																			5
GCT	-	-		1																																																																																																																																					1
GGA	-	-	4		1																																																																																																																																				5
GGC	-	-	8	1																																																																																																																																					9
GGT	-	-	1	1	1																																																																																																																																				3
GTA	-	-	1		1																																																																																																																																				2
GTC	-	-	1																																																																																																																																						1
GTG	-	-	1			1																																																																																																																																			2
GTT	-	-	2	2	1	2	1																																																																																																																																		8
TAA	-	-	14	1	2	2	1																																																																																																																																		20
TAC	-	-	2	1	1		1		1																																																																																																																																6
TAG	-	-	1		1		2																																																																																																																																		4
TAT	-	-	12	7	2	1			2																																																																																																																																24
TCA	-	-	7	1	2			1																																																																																																																																	11
TCC	-	-	1	2	2	1		1																																																																																																																																	7
TCG	-	-	1	1																																																																																																																																					2
TCT	-	-	9	1	3		1	1		1																																																																																																																															16
TGA	-	-	3	2		1																																																																																																																																			6
TGC	-	-	4		2	1	2			1																																																																																																																															10
TGG	-	-	6	2						1																																																																																																																															9
TGT	-	-	3	2	1	1																																																																																																																																			7
TTA	-	-	21	4	2	1			1																																																																																																																																29
TTC	-	-	6	7	1	1	2	1			1		1	1																																																																																																																											21
TTG	-	-	1	3			1																																																																																																																																		5
AAAG	-	14	8	1	2	2		1	2	2																																																																																																																															32
AAAT	-	13	2	4	1	1																																																																																																																																			21
AAGA	-	3	2	1																																																																																																																																					6
AAGG	-	1																																																																																																																																							1
AATA	-	3																																																																																																																																							3
AATC	-	1																																																																																																																																							1
AATG	-	1		1																																																																																																																																					2
AATT	-	8	1	1																																																																																																																																					10
ACAT	-	2	1		1		1																																																																																																																																		5
ACCA	-	1																																																																																																																																							1
ACCG	-	1																																																																																																																																							1
ACTA	-	1																																																																																																																																							1
ACTC	-	1		1																																																																																																																																					2
AGAA	-	4																																																																																																																																							4
AGAT	-	1																																																																																																																																							1
AGCA	-	1																																																																																																																																							1
AGGG	-	1																																																																																																																																							1
AGTC	-	1																																																																																																																																							1
ATAA	-	10	1	1																																																																																																																																					12
ATAC	-	4		1																																																																																																																																					5
ATAG	-	1	1					1																																																																																																																																	3
ATCA	-	3	1	1																																																																																																																																					5
ATGA	-	2		1																																																																																																																																					3
ATGT	-	4	2	2																																																																																																																																					8
ATTA	-	5																																																																																																																																							5
ATTC	-		1																																																																																																																																						1
ATTT	-	8	2																																																																																																																																						10
CAAT	-	1		1																																																																																																																																					2
CACT	-	2																																																																																																																																							2
CATA	-	2					1																																																																																																																																		3
CATC	-	2																																																																																																																																							2
CCAT	-	1																																																																																																																																							1
CCTA	-	1																																																																																																																																							1
CGCT	-	1																																																																																																																																							1
CTAC	-			1																																																																																																																																					1
CTAT	-	1	1																																																																																																																																						2
CTCC	-	1																																																																																																																																							1
CTGC	-	1																																																																																																																																							1
CTTC	-	2																																																																																																																																							2
CTTT	-	6	3																								1																																																																																																														10
GAAA	-	6	2																																																																																																																																						8
GAAT	-	1																																																																																																																																							1
GAGT	-	2																																																																																																																																							2
GATA	-	2																																																																																																																																							2
GATG	-	1																																																																																																																																							1
GATT	-	1					1																																																																																																																																		2
GCTT	-	1																																																																																																																																							1
GGAG	-	1																																																																																																																																							1
GGAT	-	1																																																																																																																																							1
GTAA	-	1																																																																																																																																							1
GTAG	-	1	1																																																																																																																																						2
GTAT	-	4	2																																																																																																																																						6
GTCA	-	1																																																																																																																																							1
GTCT	-		1																																																																																																																																						1
GTGA	-	3																																																																																																																																							3
GTTA	-				1																																																																																																																																				1
TAAA	-	12			1																																																																																																																																				13
TAAT	-	5																																																																																																																																							5
TACA	-	8	4	2	1																																																																																																																																				15
TACC	-	1																																																																																																																																							1
TAGA	-	2																																																																																																																																							2
TAGC	-	1																																																																																																																																							1
TAGG	-	1																																																																																																																																							1
TAGT	-	1																																																																																																																																							1
TATG	-	3				1																																																																																																																																			4
TATT	-	6																																																																																																																																							6
TCAA	-	2	2																																																																																																																																						4
TCAC	-	1																																																																																																																																							1
TCCA	-	1	1																																																																																																																																						2
TCCG	-		1																																																																																																																																						1
TCCT	-		1																																																																																																																																						1
TCTA	-	1	1																																																																																																																																						2
TCTG	-			1																																																																																																																																					1
TCTT	-	8	2	1	1																																																																																																																																				12
TGAA	-	1																																																																																																																																							1
TGAC	-	1																																																																																																																																							1
TGAG	-	2																																																																																																																																							2
TGAT	-	4	1																																																																																																																																						5
TGCA	-	1																																																																																																																																							1
TGTA	-	5	3																																																																																																																																						8
TTAT	-	10	1	1																																																																																																																																					12
TTCA	-	1																																																																																																																																							1
TTCC	-	1																																																																																																																																							1
TTCT	-	8	2																																																																																																																																						10
TTGA	-	3	2	1																																																																																																																																					6
TTGT	-	1																																																																																																																																							1
TTTA	-	11	3			1																																																																																																																																			15
TTTC	-	16	5	7		1																																																																																																																																			29
TTTG	-	1																																																																																																																																							1
AAAAC	4	1																																																																																																																																							5
AAAAG	49	14	5	3	1																																																																																																																																				72
AAAAT	34	10	3																																																																																																																																						47
AAACA	1	1																																																																																																																																							2
AAACC	1																																																																																																																																								1
AAAGA	14	5																																																																																																																																							19
AAAGG	5																																																																																																																																								5
AAATA	7	4	1																																																																																																																																						12
AAATC	1		2																																																																																																																																						3
AAATG	3	1																																																																																																																																							4
AAATT	11	1																																																																																																																																							12
AACAA	1																																																																																																																																								1
AACAC	2																																																																																																																																								2
AACTA	1																																																																																																																																								1
AAGAA	10	2	1																																																																																																																																						13
AAGAC	2																																																																																																																																								2
AAGGA	3																																																																																																																																								3
AAGGG	1																																																																																																																																								1
AAGTA	1																																																																																																																																								1
AATAA	12																																																																																																																																								12
AATAC	1																																																																																																																																								1
AATAT	2	4																																																																																																																																							6
AATCA	1																																																																																																																																								1
AATCC	2																																																																																																																																								2
AATGA	3																																																																																																																																								3
AATGG		1																																																																																																																																							1
AATTA	2																																																																																																																																								2
AATTC	1																																																																																																																																								1
AATTT	4																																																																																																																																								4
ACAAC	1																																																																																																																																								1
ACACC	1																																																																																																																																								1
ACACG			1																																																																																																																																						1
ACAGC	1																																																																																																																																								1
ACAGT	1																																																																																																																																								1
ACATG	1																																																																																																																																								1
ACCAA	1																																																																																																																																								1
ACCAG	1																																																																																																																																								1
ACCGT	1																																																																																																																																								1
ACGAG	1																																																																																																																																								1
ACTAG	1																																																																																																																																								1
ACTAT	1																																																																																																																																								1
ACTGG		1																																																																																																																																							1
ACTTG	1																																																																																																																																								1
AGAAA	13	2																																																																																																																																							15
AGAAG	3																																																																																																																																								3
AGAGA	2																																																																																																																																								2
AGAGC	1																																																																																																																																								1
AGATC		1																																																																																																																																							1
AGATT	1																																																																																																																																								1
AGCCC	1																																																																																																																																								1
AGCTG	1																																																																																																																																								1
AGGAA	3																																																																																																																																								3
AGGAG	1																																																																																																																																								1
AGGAT	2																																																																																																																																								2
AGGCG	1																																																																																																																																								1
AGGGA	2																																																																																																																																								2
AGGGG	1																																																																																																																																								1
AGGTG	1																																																																																																																																								1
AGTAC	1																																																																																																																																								1
ATAAA	17	1																																																																																																																																							18
ATACT	1																																																																																																																																								1
ATATA	7																																																																																																																																								7
ATATC	1																																																																																																																																								1
ATATG	1																																																																																																																																								1
ATATT	4																																																																																																																																								4
ATCAT	2																																																																																																																																								2
ATCCA	1																																																																																																																																								1
ATCCC	3																																																																																																																																								3
ATCTC	1	1																																																																																																																																							2
ATGAG	1																																																																																																																																								1
ATGCA		1																																																																																																																																							1
ATGGG		1																																																																																																																																							1
ATGTA	1																																																																																																																																								1
ATGTC	1																																																																																																																																								1
ATTAA	15																																																																																																																																								15
ATTAT	2																																																																																																																																								2
ATTCA	1																																																																																																																																								1
ATTTA	3																																																																																																																																								3
ATTTC	2																																																																																																																																								2
ATTTG	3																																																																																																																																								3
ATTTT	9	3		1																																																																																																																																					13
CAAAA	2																																																																																																																																								2
CAAAG	1																																																																																																																																								1
CAACC	1																																																																																																																																								1
CAATG	1																																																																																																																																								1
CAATT	1																																																																																																																																								1
CACAT	1																																																																																																																																								1
CACCC	1																																																																																																																																								1
CACTT	1																																																																																																																																								1
CAGCC	1																																																																																																																																								1
CAGGA	1																																																																																																																																								1
CATAC	1																																																																																																																																								1
CATAG	1																																																																																																																																								1
CATAT	1																																																																																																																																								1
CATCT	2		1																																																																																																																																						3
CATGT	1																																																																																																																																								1
CATTT	1																																																																																																																																								1
CCAAC	3																																																																																																																																								3
CCACC	1																																																																																																																																								1
CCATA	1																																																																																																																																								1
CCCAA	2																																																																																																																																								2
CCCAT	1																																																																																																																																								1
CCCCT	1																																																																																																																																								1
CCCGT		1																																																																																																																																							1
CCCTC	3																																																																																																																																								3
CCCTT	1																																																																																																																																								1
CCGGT	1																																																																																																																																								1
CCGTA	1																																																																																																																																								1
CCGTG	1																																																																																																																																								1
CCTAA		1																																																																																																																																							1
CCTAT	1																																																																																																																																								1
CCTCC	1	1																																																																																																																																							2
CCTTC	2																																																																																																																																								2
CCTTT	4																																																																																																																																								4
CGAAC	1																																																																																																																																								1
CGACA	1																																																																																																																																								1
CGAGG		1																																																																																																																																							1
CGGCT	1																																																																																																																																								1
CGGTA		1																																																																																																																																							1
CTAAA	1																																																																																																																																								1
CTACA		1																																																																																																																																							1
CTAGT		1																																																																																																																																							1
CTATC	2																																																																																																																																								2
CTCAA	1																																																																																																																																								1
CTCAG	1																																																																																																																																								1
CTCAT	1																																																																																																																																								1
CTCCA	1																																																																																																																																								1
CTCCG	1																																																																																																																																								1
CTCTC			1																																																																																																																																						1
CTCTT	1																																																																																																																																								1
CTGAA	1																																																																																																																																								1
CTGAT		1																																																																																																																																							1
CTGCC	1																																																																																																																																								1
CTGTC	1																																																																																																																																								1
CTTCC		1																																																																																																																																							1
CTTCT	3																																																																																																																																								3
CTTGT		1																																																																																																																																							1
CTTTC	1																																																																																																																																								1
CTTTG	2																																																																																																																																								2
CTTTT	9	5	2																																																																																																																																						16
GAAAA	19	3		1																																																																																																																																					23
GAAAG	1																																																																																																																																								1
GAACC	1																																																																																																																																								1
GAAGG	1																																																																																																																																								1
GAATA	1																																																																																																																																								1
GAATG	1																																																																																																																																								1
GAATT	2																																																																																																																																								2
GACAA	1																																																																																																																																								1
GACGG	1																																																																																																																																								1
GACTA	1																																																																																																																																								1
GAGAA	2																																																																																																																																								2
GAGAC	1	1																																																																																																																																							2
GAGAG	1																																																																																																																																								1
GAGAT	1		1																																																																																																																																						2
GAGGG	1																																																																																																																																								1
GATAA	1																																																																																																																																								1
GATGC	1																																																																																																																																								1
GATGT	1																																																																																																																																								1
GATTG	3																																																																																																																																								3
GCAAC	1																																																																																																																																								1
GCGTG	1																																																																																																																																								1
GCTCA	1																																																																																																																																								1
GCTGA	1																																																																																																																																								1
GGAAA	2																																																																																																																																								2
GGAAG	1																																																																																																																																								1
GGAAT	1																																																																																																																																								1
GGAGA	1																																																																																																																																								1
GGATA	1																																																																																																																																								1
GGCTC	1																																																																																																																																								1
GGGAC	1																																																																																																																																								1
GGGAG	1																																																																																																																																								1
GGGGT	1																																																																																																																																								1
GGTAG		1																																																																																																																																							1
GGTAT	1																																																																																																																																								1
GGTCT		1																																																																																																																																							1
GGTGT	1																																																																																																																																								1
GGTTC	1																																																																																																																																								1
GGTTT	1																																																																																																																																								1
GTACG	1																																																																																																																																								1
GTACT	1																																																																																																																																								1
GTATG	3																																																																																																																																								3
GTATT	1																																																																																																																																								1
GTCAT		1																																																																																																																																							1
GTCCT	1																																																																																																																																								1
GTCGA		1																																																																																																																																							1
GTCTA	2																																																																																																																																								2
GTGTA	1																																																																																																																																								1
GTGTT	1																																																																																																																																								1
GTTAG	1																																																																																																																																								1
GTTGG	1																																																																																																																																								1
GTTTA	1																																																																																																																																								1
GTTTG	1																																																																																																																																								1
GTTTT	2																																																																																																																																								2
TAAAA	8	1	1																																																																																																																																						10
TAAAT	5																																																																																																																																								5
TAACA	1																																																																																																																																								1
TAACC	1																																																																																																																																								1
TAATA	4																																																																																																																																								4
TAATG		1																																																																																																																																							1
TAATT	5																																																																																																																																								5
TACAA	1																																																																																																																																								1
TACAG	1																																																																																																																																								1
TACCA	1																																																																																																																																								1
TACCC	1																																																																																																																																								1
TACTG	1																																																																																																																																								1
TAGAA	1																																																																																																																																								1
TAGAT	1																																																																																																																																								1
TAGCA	1																																																																																																																																								1
TAGCT	1																																																																																																																																								1
TAGTT	2																																																																																																																																								2
TATAA	6																																																																																																																																								6
TATAT	3																																																																																																																																								3
TATCA	1																																																																																																																																								1
TATCG	1																																																																																																																																								1
TATGT	1																																																																																																																																								1
TATTA	4																																																																																																																																								4
TATTG	1																																																																																																																																								1
TATTT	8	2																																																																																																																																							10
TCAAC	1																																																																																																																																								1
TCACA	1																																																																																																																																								1
TCAGC	1																																																																																																																																								1
TCATC	2	1																																																																																																																																							3
TCATT	1		1																																																																																																																																						2
TCCAA	1																																																																																																																																								1
TCCTC	3																																																																																																																																								3
TCGGG	1																																																																																																																																								1
TCGTT		1																																																																																																																																							1
TCTAC	1																																																																																																																																								1
TCTAG	1																																																																																																																																								1
TCTAT		1																																																																																																																																							1
TCTCC	1																																																																																																																																								1
TCTCT	1	1	1																																																																																																																																						3
TCTTA	1																																																																																																																																								1
TCTTC	2																																																																																																																																								2
TCTTG	1																																																																																																																																								1
TCTTT	15	3																																																																																																																																							18
TGAGC	1																																																																																																																																								1
TGATA	2																																																																																																																																								2
TGATG	1																																																																																																																																								1
TGCAT	1																																																																																																																																								1
TGGCT	1																																																																																																																																								1
TGGGA	1																																																																																																																																								1
TGGGT	1																																																																																																																																								1
TGTAC	5																																																																																																																																								5
TGTGG	1																																																																																																																																								1
TGTTG	1																																																																																																																																								1
TTAAA	3																																																																																																																																								3
TTAAT	15																																																																																																																																								15
TTATA	5	1																																																																																																																																							6
TTATT	9	2				1																																																																																																																																			12
TTCAT	1																																																																																																																																								1
TTCCC	2																																																																																																																																								2
TTCCT	1																																																																																																																																								1
TTCTC	2																																																																																																																																								2
TTCTT	13	2		1												1																																																																																																																									17
TTGAA	1	1																																																																																																																																							2
TTGAC	2																																																																																																																																								2
TTGCA	1	1																																																																																																																																							2
TTGCG	1																																																																																																																																								1
TTGCT	1																																																																																																																																								1
TTGGG	1																																																																																																																																								1
TTGGT	1																																																																																																																																								1
TTGTC	1																																																																																																																																								1
TTTAA	6		1																																																																																																																																						7
TTTAC	1																																																																																																																																								1
TTTAG	1																																																																																																																																								1
TTTAT	21	3																																																																																																																																							24
TTTCA	1																																																																																																																																								1
TTTCC	5																																																																																																																																								5
TTTCG	1																																																																																																																																								1
TTTCT	15	1	2	1																																																																																																																																					19
TTTGA	3																																																																																																																																								3
TTTGG	1																																																																																																																																								1
TTTGT	1																																																																																																																																								1
TTTTA	28	1	2		1		1																																																																																																																																		33
TTTTC	43	16	3																																																																																																																																						62
TTTTG	3	1																																																																																																																																							4
AAAAAG	17	4	3																																																																																																																																						24
AAAAAT	16	3		1																																																																																																																																					20
AAAACA	1	1																																																																																																																																							2
AAAAGA	3	4																																																																																																																																							7
AAAAGC			1																																																																																																																																						1
AAAAGG			1																																																																																																																																						1
AAAATA	7																																																																																																																																								7
AAAATG	1	1																																																																																																																																							2
AAAATT	2																																																																																																																																								2
AAACAG		1																																																																																																																																							1
AAAGAA	5	1																																																																																																																																							6
AAAGTG	1																																																																																																																																								1
AAATAA	4																																																																																																																																								4
AAATAT			1																																																																																																																																						1
AAATTG	1																																																																																																																																								1
AACACC	1																																																																																																																																								1
AACAGG	1																																																																																																																																								1
AACCAC	1																																																																																																																																								1
AACGGA	1																																																																																																																																								1
AACTCC	1																																																																																																																																								1
AAGAAA	3																																																																																																																																								3
AAGAAC	1				1																																																																																																																																				2
AAGAGG		1																																																																																																																																							1
AAGATA	1																																																																																																																																								1
AAGGGA	1																																																																																																																																								1
AATAAA	5																																																																																																																																								5
AATAAC	1																																																																																																																																								1
AATCTA	1																																																																																																																																								1
AATGTA		1																																																																																																																																							1
AATTAA	2																																																																																																																																								2
AATTTA	1																																																																																																																																								1
AATTTT	2	1																																																																																																																																							3
ACAACC	1																																																																																																																																								1
ACAAGA	1																																																																																																																																								1
ACAATC	1																																																																																																																																								1
ACAATT	1																																																																																																																																								1
ACAGCA			1																																																																																																																																						1
ACCACT	1																																																																																																																																								1
ACCATC	2																																																																																																																																								2
ACCCAA	1																																																																																																																																								1
ACGACC	1																																																																																																																																								1
ACGATG	1																																																																																																																																								1
ACGTCA	1																																																																																																																																								1
AGAAAA	4	2																																																																																																																																							6
AGAAAG	1																																																																																																																																								1
AGACAC	1																																																																																																																																								1
AGACGG	1																																																																																																																																								1
AGAGAA	2																																																																																																																																								2
AGAGCC	1																																																																																																																																								1
AGAGCG	1																																																																																																																																								1
AGAGGC		1																																																																																																																																							1
AGCCAT	1																																																																																																																																								1
AGCGAC	1																																																																																																																																								1
AGCGTC	1																																																																																																																																								1
AGCTCT	1	1																																																																																																																																							2
AGGAGC	2																																																																																																																																								2
AGGCAG	1																																																																																																																																								1
AGGGCA	1																																																																																																																																								1
AGGTGC	1																																																																																																																																								1
AGTATC	1																																																																																																																																								1
AGTATG	1																																																																																																																																								1
AGTCCA	1																																																																																																																																								1
AGTGAG	1																																																																																																																																								1
AGTGGC	1																																																																																																																																								1
AGTGGT	1																																																																																																																																								1
ATAAAA	3																																																																																																																																								3
ATAAAG	1																																																																																																																																								1
ATAACT	1																																																																																																																																								1
ATAATT	2																																																																																																																																								2
ATATTA	2																																																																																																																																								2
ATCAAA		1																																																																																																																																							1
ATCCAT		1																																																																																																																																							1
ATCCCA	1																																																																																																																																								1
ATCGTG	1																																																																																																																																								1
ATCTAC	1																																																																																																																																								1
ATCTTC	1																																																																																																																																								1
ATGAAC	1																																																																																																																																								1
ATGACC	1																																																																																																																																								1
ATGACG	1																																																																																																																																								1
ATGATT	1																																																																																																																																								1
ATGCCA	1																																																																																																																																								1
ATGTAC		1																																																																																																																																							1
ATTAAT	4																																																																																																																																								4
ATTATA	5																																																																																																																																								5
ATTCTC	1																																																																																																																																								1
ATTTAA	2	1																																																																																																																																							3
ATTTAT	1																																																																																																																																								1
ATTTTC	1																																																																																																																																								1
ATTTTT	3																																																																																																																																								3
CAACAG	1		1																																																																																																																																						2
CAACAT	1																																																																																																																																								1
CAAGAA	1																																																																																																																																								1
CAAGCG	1																																																																																																																																								1
CACATA	1																																																																																																																																								1
CACCAA	1																																																																																																																																								1
CACGGC	1																																																																																																																																								1
CACTAC	2	1	1																																																																																																																																						4
CAGAAG	1																																																																																																																																								1
CAGCAA	2																																																																																																																																								2
CAGCAT	1																																																																																																																																								1
CAGCCA	1																																																																																																																																								1
CAGCCC		1																																																																																																																																							1
CAGCCG	1																																																																																																																																								1
CAGGCT	3																																																																																																																																								3
CAGTCA	1																																																																																																																																								1
CAGTGG		1																																																																																																																																							1
CATAAT	1																																																																																																																																								1
CATCCT		1																																																																																																																																							1
CATGGA	1																																																																																																																																								1
CATGTG	1																																																																																																																																								1
CATTTC	1																																																																																																																																								1
CATTTT	1																																																																																																																																								1
CCAAAC	2																																																																																																																																								2
CCAAGA	1																																																																																																																																								1
CCACAA	1																																																																																																																																								1
CCACCT		1																																																																																																																																							1
CCACTT	1																																																																																																																																								1
CCAGTG	1																																																																																																																																								1
CCATTC	1																																																																																																																																								1
CCCCAA	1																																																																																																																																								1
CCCCCT	1																																																																																																																																								1
CCCTCT	1																																																																																																																																								1
CCGAAC	2																																																																																																																																								2
CCGATG	1																																																																																																																																								1
CCGCCT	1																																																																																																																																								1
CCGGCT	1																																																																																																																																								1
CCGTGG	2																																																																																																																																								2
CCTCTC		1																																																																																																																																							1
CCTCTT	1																																																																																																																																								1
CCTTGC	1																																																																																																																																								1
CCTTTC	1	1																																																																																																																																							2
CCTTTT	1																																																																																																																																								1
CGAAGC	1																																																																																																																																								1
CGACCT	1																																																																																																																																								1
CGAGGA	1																																																																																																																																								1
CGATCC	1																																																																																																																																								1
CGCACA	1																																																																																																																																								1
CGCAGC		1																																																																																																																																							1
CGCCTC	1																																																																																																																																								1
CGCTCA	1																																																																																																																																								1
CGGTGC		1																																																																																																																																							1
CGTCCG	1																																																																																																																																								1
CGTGAT	1																																																																																																																																								1
CTACCA	1																																																																																																																																								1
CTATCG		1																																																																																																																																							1
CTATGA	1																																																																																																																																								1
CTATTT	1																																																																																																																																								1
CTCATC	1																																																																																																																																								1
CTCTCC	1																																																																																																																																								1
CTCTTC	2																																																																																																																																								2
CTCTTT		1																																																																																																																																							1
CTGAGC	1																																																																																																																																								1
CTGATG	1																																																																																																																																								1
CTGCCG		1																																																																																																																																							1
CTGCTA	1																																																																																																																																								1
CTGCTC	1																																																																																																																																								1
CTGGAG	1																																																																																																																																								1
CTGTTG	1																																																																																																																																								1
CTTCGT	1																																																																																																																																								1
CTTCTA	1																																																																																																																																								1
CTTCTC	1																																																																																																																																								1
CTTGTT	1																																																																																																																																								1
CTTTTA	1																																																																																																																																								1
CTTTTC	1																																																																																																																																								1
CTTTTT	4	2																																																																																																																																							6
GAAAAA	5	1																																																																																																																																							6
GAAAAG	2																																																																																																																																								2
GAAAAT	1																																																																																																																																								1
GAAAGA	1																																																																																																																																								1
GAAGAC	2																																																																																																																																								2
GAAGAG	3																																																																																																																																								3
GAATTA	1																																																																																																																																								1
GACAAC	1																																																																																																																																								1
GACAGC	1																																																																																																																																								1
GACAGG	1																																																																																																																																								1
GACGAG	2																																																																																																																																								2
GAGAGC	1																																																																																																																																								1
GAGCCA	3																																																																																																																																								3
GAGCCC	1	1																																																																																																																																							2
GAGCCT	1																																																																																																																																								1
GAGGAA	1																																																																																																																																								1
GAGGAC	1																																																																																																																																								1
GAGGAT	4																																																																																																																																								4
GAGGGA		1																																																																																																																																							1
GAGGTG	1																																																																																																																																								1
GAGTGG	1																																																																																																																																								1
GATAGG		1																																																																																																																																							1
GATATC	1																																																																																																																																								1
GATGAA	1																																																																																																																																								1
GATGAC	1																																																																																																																																								1
GATGAG	2	1																																																																																																																																							3
GATGGC	1																																																																																																																																								1
GATTAT	1																																																																																																																																								1
GCAAAA		1																																																																																																																																							1
GCAACA	1																																																																																																																																								1
GCAGCC	1																																																																																																																																								1
GCAGTA	1																																																																																																																																								1
GCATCA	1																																																																																																																																								1
GCCACC	1																																																																																																																																								1
GCCATC	1																																																																																																																																								1
GCCATT	1																																																																																																																																								1
GCCGAT	1																																																																																																																																								1
GCCGCT		1																																																																																																																																							1
GCGATT	1																																																																																																																																								1
GCGCAG		1																																																																																																																																							1
GCGCCT	1																																																																																																																																								1
GCGCGG	1																																																																																																																																								1
GCGCTC	1																																																																																																																																								1
GCGGCA	1																																																																																																																																								1
GCGTGA	1																																																																																																																																								1
GCTCCC	1																																																																																																																																								1
GCTCCT		1																																																																																																																																							1
GCTGCA	1																																																																																																																																								1
GCTGCG	1																																																																																																																																								1
GCTGGA	1																																																																																																																																								1
GCTTCC	1																																																																																																																																								1
GCTTCT	1																																																																																																																																								1
GCTTTT	1																																																																																																																																								1
GGAAAT		1																																																																																																																																							1
GGAGCC	2																																																																																																																																								2
GGAGCG	1																																																																																																																																								1
GGAGCT	1																																																																																																																																								1
GGAGGG	1																																																																																																																																								1
GGATTG	1																																																																																																																																								1
GGCGGA	1																																																																																																																																								1
GGCGGT	1																																																																																																																																								1
GGCTCC	1																																																																																																																																								1
GGCTGC	2																																																																																																																																								2
GGGAGA	1																																																																																																																																								1
GGGGAT	1																																																																																																																																								1
GGGGGA	1																																																																																																																																								1
GGGTTG	1																																																																																																																																								1
GGTCCC		1																																																																																																																																							1
GGTGAG		1																																																																																																																																							1
GGTGGC	1																																																																																																																																								1
GGTGTG		1																																																																																																																																							1
GGTTAT	1																																																																																																																																								1
GTAGCA	1																																																																																																																																								1
GTAGTC	1																																																																																																																																								1
GTATAG	1																																																																																																																																								1
GTCAAA	1																																																																																																																																								1
GTCACC	1																																																																																																																																								1
GTCATC				1																																																																																																																																					1
GTCCAT	1																																																																																																																																								1
GTCCTT		1																																																																																																																																							1
GTCGCA	1																																																																																																																																								1
GTGCTC	1																																																																																																																																								1
GTGGCA	1																																																																																																																																								1
GTGGGG	1																																																																																																																																								1
GTGGTT	1																																																																																																																																								1
GTGTAT	1																																																																																																																																								1
GTTCCT	1																																																																																																																																								1
GTTGAA	2																																																																																																																																								2
GTTGCA	1																																																																																																																																								1
GTTGGC		1																																																																																																																																							1
GTTGTG	1																																																																																																																																								1
GTTTGG	1																																																																																																																																								1
GTTTTT	1																																																																																																																																								1
TAAAAA	4																																																																																																																																								4
TAATTA	2																																																																																																																																								2
TAGACA	1																																																																																																																																								1
TAGCGA	1																																																																																																																																								1
TAGTAA	1																																																																																																																																								1
TAGTGG	1																																																																																																																																								1
TATAAA	1																																																																																																																																								1
TATATG	1																																																																																																																																								1
TATGCA	1																																																																																																																																								1
TATTAA	1																																																																																																																																								1
TATTGG	1																																																																																																																																								1
TATTTT	7		1																																																																																																																																						8
TCAACA	1																																																																																																																																								1
TCAATG	1																																																																																																																																								1
TCACAT	1																																																																																																																																								1
TCAGCC	1																																																																																																																																								1
TCAGGA	1																																																																																																																																								1
TCAGGT	1																																																																																																																																								1
TCATCG	3																																																																																																																																								3
TCATTC	1																																																																																																																																								1
TCATTT	1																																																																																																																																								1
TCCAAG	1																																																																																																																																								1
TCCAAT	1																																																																																																																																								1
TCCAGC	1	1																																																																																																																																							2
TCCCTC	2																																																																																																																																								2
TCCCTG	1																																																																																																																																								1
TCGAGA	1																																																																																																																																								1
TCGATC	1																																																																																																																																								1
TCGCAG	1																																																																																																																																								1
TCGGCT		1																																																																																																																																							1
TCGGGA	1																																																																																																																																								1
TCGTCA	2																																																																																																																																								2
TCGTCT	1																																																																																																																																								1
TCTACG	1																																																																																																																																								1
TCTACT		1																																																																																																																																							1
TCTGAG	1																																																																																																																																								1
TCTGCA	1																																																																																																																																								1
TCTGCG	1																																																																																																																																								1
TCTTCA		1																																																																																																																																							1
TCTTCC	3																																																																																																																																								3
TCTTTC	3																																																																																																																																								3
TCTTTG	1																																																																																																																																								1
TCTTTT	5																																																																																																																																								5
TGAAAC	1																																																																																																																																								1
TGAATG	1																																																																																																																																								1
TGACCC	1																																																																																																																																								1
TGACGA	1																																																																																																																																								1
TGACGC	1																																																																																																																																								1
TGAGCC	1																																																																																																																																								1
TGAGGA	2																																																																																																																																								2
TGATGT	1																																																																																																																																								1
TGATTA	1																																																																																																																																								1
TGCGGT	1																																																																																																																																								1
TGCTGG	1	1																																																																																																																																							2
TGCTTT	2																																																																																																																																								2
TGGCTA	1																																																																																																																																								1
TGGGCC	1																																																																																																																																								1
TGGGGT	1																																																																																																																																								1
TGGTAG	1																																																																																																																																								1
TGGTGA	3																																																																																																																																								3
TGGTGT	1																																																																																																																																								1
TGTACA	1																																																																																																																																								1
TGTAGT	1																																																																																																																																								1
TGTATA	1																																																																																																																																								1
TGTCCT	1																																																																																																																																								1
TGTCGT	1																																																																																																																																								1
TGTCTT	1																																																																																																																																								1
TGTGTA	1																																																																																																																																								1
TGTTTT	2																																																																																																																																								2
TTAAAA	2																																																																																																																																								2
TTAATA	4																																																																																																																																								4
TTAATT	2																																																																																																																																								2
TTACTA	1																																																																																																																																								1
TTATAA		1																																																																																																																																							1
TTATTT	8																																																																																																																																								8
TTCCTG	1																																																																																																																																								1
TTCGCC	1																																																																																																																																								1
TTCTCA	1																																																																																																																																								1
TTCTCT	1																																																																																																																																								1
TTCTGC	1																																																																																																																																								1
TTCTTA	1																																																																																																																																								1
TTCTTT	2	3																																																																																																																																							5
TTGAGG	1																																																																																																																																								1
TTGATG							1																																																																																																																																		1
TTGCCA		1																																																																																																																																							1
TTGGGA	1																																																																																																																																								1
TTGGGG	1																																																																																																																																								1
TTGTAG	1																																																																																																																																								1
TTGTGT	1																																																																																																																																								1
TTTAAT	2																																																																																																																																								2
TTTACC	1																																																																																																																																								1
TTTAGA	1																																																																																																																																								1
TTTATT	11		1																																																																																																																																						12
TTTCAT	1																																																																																																																																								1
TTTCCC		1																																																																																																																																							1
TTTCCT	1																																																																																																																																								1
TTTCTA	1																																																																																																																																								1
TTTCTC	2																																																																																																																																								2
TTTCTT	13	2																																																																																																																																							15
TTTGGG	1																																																																																																																																								1
TTTGTT	1																																																																																																																																								1
TTTTAA	2																																																																																																																																								2
TTTTAC	1																																																																																																																																								1
TTTTAT	4	1	1																																																																																																																																						6
TTTTCA	1																																																																																																																																								1
TTTTCC	2																																																																																																																																								2
TTTTCT	11	1																																																																																																																																							12
TTTTGG	1		1																																																																																																																																						2
TTTTTA	13	2																																																																																																																																							15
TTTTTC	10	1	1																																																																																																																																						12

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	28	24	21	11	16	8	13	5	5	3	2	5		1	2	1	3	1					1		1	1	4	1			1		1									1		1	1				2																																																													1									1	166
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	2	3					1		2																																					1												1	1																																																												15
AC/GT	-	-	-	39	15	10	7	6	3	1	5	1	2	3	1		3	2	1	1					1		1															1																																																																																															103
AG/CT	-	-	-	105	46	33	26	16	7	7	7	2	4	5	1	3			1				1																																																																																																																		264
AT/AT	-	-	-	201	68	34	22	15	7	8	5	3	5			1																																																																																																																									369
CG/CG	-	-	-	3		1																																																																																																																																			4
AAC/GTT	-	-	18	14	7	6	2																																																																																																																																		47
AAG/CTT	-	-	54	23	8	8	5	9		1	2		2	2			1		1					1			1																																																																																																														118
AAT/ATT	-	-	86	35	15	6	4		3	2	1		1						1																																																																																																																						154
ACC/GGT	-	-	22	7	2	1				1																																																																																																																															33
ACG/CGT	-	-	8	3	2																																																																																																																																				13
ACT/AGT	-	-	14	3	6	1	3		1	2		1													1				1									1																																																																																																			34
AGC/CTG	-	-	19	15	6	3	3	1		1																																																																																																																															48
AGG/CCT	-	-	14	9	5	2	1	2		2																																																																																																																															35
ATC/ATG	-	-	24	9	3	3	1	1						1																																																																																																																											42
CCG/CGG	-	-	21	5	1	2																																																																																																																																			29
AAAC/GTTT	-	2																																																																																																																																							2
AAAG/CTTT	-	65	24	10	3	3		1	2	2																	1																																																																																																														111
AAAT/ATTT	-	73	9	6	2	2																																																																																																																																			92
AACC/GGTT	-	1																																																																																																																																							1
AACT/AGTT	-	2			1																																																																																																																																				3
AAGC/CTTG	-	2																																																																																																																																							2
AAGG/CCTT	-	4	1																																																																																																																																						5
AAGT/ACTT	-	1																																																																																																																																							1
AATC/ATTG	-	15	6	3			1																																																																																																																																		25
AATG/ATTC	-	6	1	2																																																																																																																																					9
AATT/AATT	-	18	1	1																																																																																																																																					20
ACAG/CTGT	-		1	1																																																																																																																																					2
ACAT/ATGT	-	32	12	5	2	1	2																																																																																																																																		54
ACCG/CGGT	-	1																																																																																																																																							1
ACCT/AGGT	-	4	1	1																																																																																																																																					6
ACGG/CCGT	-		1																																																																																																																																						1
ACTC/AGTG	-	11		1																																																																																																																																					12
ACTG/AGTC	-	3																																																																																																																																							3
AGAT/ATCT	-	8	3					1																																																																																																																																	12
AGCG/CGCT	-	1																																																																																																																																							1
AGCT/AGCT	-	1																																																																																																																																							1
AGGC/CCTG	-	1																																																																																																																																							1
AGGG/CCCT	-	3																																																																																																																																							3
ATCC/ATGG	-	6	1																																																																																																																																						7
ATGC/ATGC	-	1																																																																																																																																							1
AAAAC/GTTTT	14	3																																																																																																																																							17
AAAAG/CTTTT	200	53	13	6	1											1																																																																																																																									274
AAAAT/ATTTT	153	27	7	1	1	1	1																																																																																																																																		191
AAACC/GGTTT	6																																																																																																																																								6
AAACG/CGTTT	1	1																																																																																																																																							2
AAACT/AGTTT	6																																																																																																																																								6
AAAGC/CTTTG	4																																																																																																																																								4
AAAGG/CCTTT	25																																																																																																																																								25
AAAGT/ACTTT	2																																																																																																																																								2
AAATC/ATTTG	8		2																																																																																																																																						10
AAATG/ATTTC	12	1	1																																																																																																																																						14
AAATT/AATTT	69	1	1																																																																																																																																						71
AACAC/GTGTT	5																																																																																																																																								5
AACAT/ATGTT	2																																																																																																																																								2
AACCC/GGGTT	9																																																																																																																																								9
AACCG/CGGTT	3																																																																																																																																								3
AACCT/AGGTT	2	1																																																																																																																																							3
AACGC/CGTTG	2																																																																																																																																								2
AACTC/AGTTG	2																																																																																																																																								2
AACTG/AGTTC	1																																																																																																																																								1
AAGAC/CTTGT	5	1																																																																																																																																							6
AAGAG/CTCTT	16	1	1																																																																																																																																						18
AAGAT/ATCTT	2																																																																																																																																								2
AAGCC/CTTGG	1																																																																																																																																								1
AAGCT/AGCTT	1																																																																																																																																								1
AAGGG/CCCTT	10	1																																																																																																																																							11
AAGTC/ACTTG	3																																																																																																																																								3
AAGTG/ACTTC	1																																																																																																																																								1
AATAC/ATTGT	4																																																																																																																																								4
AATAG/ATTCT	2	1																																																																																																																																							3
AATAT/ATATT	37	5																																																																																																																																							42
AATCC/ATTGG	7																																																																																																																																								7
AATCT/AGATT	2																																																																																																																																								2
AATGC/ATTGC	3	2																																																																																																																																							5
AATGG/ATTCC	2	1																																																																																																																																							3
AATGT/ACATT	1	1																																																																																																																																							2
AATTC/AATTG	6	1																																																																																																																																							7
ACACC/GGTGT	3																																																																																																																																								3
ACACG/CGTGT	1		1																																																																																																																																						2
ACACT/AGTGT	1	1																																																																																																																																							2
ACAGC/CTGTG	1																																																																																																																																								1
ACAGG/CCTGT	3																																																																																																																																								3
ACAGT/ACTGT	10																																																																																																																																								10
ACATC/ATGTG	4																																																																																																																																								4
ACATG/ATGTC	3	1																																																																																																																																							4
ACCAG/CTGGT	1	1																																																																																																																																							2
ACCAT/ATGGT	7																																																																																																																																								7
ACCCC/GGGGT	3																																																																																																																																								3
ACCCG/CGGGT	1																																																																																																																																								1
ACCCT/AGGGT	1	1																																																																																																																																							2
ACCGG/CCGGT	1																																																																																																																																								1
ACCGT/ACGGT	3	1																																																																																																																																							4
ACCTC/AGGTG	1																																																																																																																																								1
ACGAG/CGTCT	2	1																																																																																																																																							3
ACGAT/ATCGT	1																																																																																																																																								1
ACGCC/CGTGG	1																																																																																																																																								1
ACGGC/CCGTG	1																																																																																																																																								1
ACGGG/CCCGT	2	1																																																																																																																																							3
ACTAG/AGTCT	5	1																																																																																																																																							6
ACTAT/AGTAT	2																																																																																																																																								2
ACTCC/AGTGG	1																																																																																																																																								1
ACTCG/AGTCG		1																																																																																																																																							1
ACTCT/AGAGT	1																																																																																																																																								1
ACTGG/AGTCC		1																																																																																																																																							1
AGAGC/CTCTG	1																																																																																																																																								1
AGAGG/CCTCT	7		1																																																																																																																																						8
AGATC/ATCTG		2																																																																																																																																							2
AGATG/ATCTC	8	2	2																																																																																																																																						12
AGCAT/ATGCT	2																																																																																																																																								2
AGCCC/CTGGG	2																																																																																																																																								2
AGCCG/CGGCT	2																																																																																																																																								2
AGCGG/CCGCT	1																																																																																																																																								1
AGCTC/AGCTG	6																																																																																																																																								6
AGGAT/ATCCT	6																																																																																																																																								6
AGGCG/CCTCG	1	1																																																																																																																																							2
AGGGC/CCCTG	1																																																																																																																																								1
AGGGG/CCCCT	8	1																																																																																																																																							9
ATATC/ATATG	8																																																																																																																																								8
ATCCC/ATGGG	5	1																																																																																																																																							6
ATCGC/ATGCG	1																																																																																																																																								1
AAAAAC/GTTTTT	5	1																																																																																																																																							6
AAAAAG/CTTTTT	82	21	4																																																																																																																																						107
AAAAAT/ATTTTT	85	6	3	1																																																																																																																																					95
AAAACC/GGTTTT	1		1																																																																																																																																						2
AAAAGC/CTTTTG	3	1	1																																																																																																																																						5
AAAAGG/CCTTTT	7		1																																																																																																																																						8
AAAAGT/ACTTTT	2																																																																																																																																								2
AAAATC/ATTTTG		1																																																																																																																																							1
AAAATG/ATTTTC	7	1																																																																																																																																							8
AAAATT/AATTTT	14	1																																																																																																																																							15
AAACAC/GTGTTT	1																																																																																																																																								1
AAACAG/CTGTTT		1																																																																																																																																							1
AAACCC/GGGTTT	5																																																																																																																																								5
AAACGG/CCGTTT	1																																																																																																																																								1
AAACTG/AGTTTC	1																																																																																																																																								1
AAAGAC/CTTTGT	2																																																																																																																																								2
AAAGAG/CTCTTT	10	1																																																																																																																																							11
AAAGAT/ATCTTT	2																																																																																																																																								2
AAAGGG/CCCTTT	2	2																																																																																																																																							4
AAAGGT/ACCTTT	1																																																																																																																																								1
AAAGTC/ACTTTG	1																																																																																																																																								1
AAAGTG/ACTTTC	1																																																																																																																																								1
AAATAG/ATTTCT	2																																																																																																																																								2
AAATAT/ATATTT	2		1																																																																																																																																						3
AAATCT/AGATTT	2																																																																																																																																								2
AAATGG/ATTTCC	1	1																																																																																																																																							2
AAATGT/ACATTT		1																																																																																																																																							1
AAATTG/AATTTC	1																																																																																																																																								1
AAATTT/AAATTT	3	1																																																																																																																																							4
AACAAG/CTTGTT	4				1																																																																																																																																				5
AACAAT/ATTGTT	1																																																																																																																																								1
AACACC/GGTGTT	3																																																																																																																																								3
AACAGC/CTGTTG	5		2																																																																																																																																						7
AACAGG/CCTGTT	3																																																																																																																																								3
AACATC/ATGTTG	3						1																																																																																																																																		4
AACATG/ATGTTC	1																																																																																																																																								1
AACCAC/GGTTGT	5																																																																																																																																								5
AACCAT/ATGGTT	1																																																																																																																																								1
AACCCC/GGGGTT	4																																																																																																																																								4
AACCCG/CGGGTT	2																																																																																																																																								2
AACCGC/CGGTTG	1																																																																																																																																								1
AACCTC/AGGTTG	1																																																																																																																																								1
AACCTG/AGGTTC	1																																																																																																																																								1
AACGAC/CGTTGT	2																																																																																																																																								2
AACGCC/CGTTGG		1																																																																																																																																							1
AACGTC/ACGTTG	1																																																																																																																																								1
AACTAC/AGTTGT	2																																																																																																																																								2
AACTAT/AGTTAT	1																																																																																																																																								1
AACTCC/AGTTGG	1																																																																																																																																								1
AACTGC/AGTTGC	1																																																																																																																																								1
AACTTC/AAGTTG	2																																																																																																																																								2
AAGAAT/ATTCTT	1																																																																																																																																								1
AAGACC/CTTGGT	1																																																																																																																																								1
AAGACG/CGTCTT	4																																																																																																																																								4
AAGAGG/CCTCTT	10	1																																																																																																																																							11
AAGATG/ATCTTC	2	1																																																																																																																																							3
AAGCAG/CTGCTT	3																																																																																																																																								3
AAGCCG/CGGCTT	1	1																																																																																																																																							2
AAGCGC/CGCTTG	1																																																																																																																																								1
AAGCGG/CCGCTT	1																																																																																																																																								1
AAGGAC/CCTTGT	1	1																																																																																																																																							2
AAGGAG/CCTTCT	1																																																																																																																																								1
AAGGCG/CCTTCG	1																																																																																																																																								1
AAGGGC/CCCTTG	2																																																																																																																																								2
AAGTAG/ACTTCT	1	1																																																																																																																																							2
AAGTCC/ACTTGG	2																																																																																																																																								2
AAGTGG/ACTTCC	1																																																																																																																																								1
AATACC/ATTGGT	1																																																																																																																																								1
AATAGT/ACTATT	2																																																																																																																																								2
AATATT/AATATT	11																																																																																																																																								11
AATCAC/ATTGTG	1																																																																																																																																								1
AATCAT/ATGATT	4																																																																																																																																								4
AATCCC/ATTGGG	3																																																																																																																																								3
AATCGC/ATTGCG	1																																																																																																																																								1
AATGAG/ATTCTC	3																																																																																																																																								3
AATGCC/ATTGGC	1																																																																																																																																								1
AATGGC/ATTGCC	1	1																																																																																																																																							2
AATGGG/ATTCCC	1																																																																																																																																								1
AATGTC/ACATTG	1																																																																																																																																								1
AATGTG/ACATTC	2																																																																																																																																								2
AATTAC/AATTGT	1																																																																																																																																								1
AATTAG/AATTCT	1																																																																																																																																								1
AATTAT/AATTAT	9	1																																																																																																																																							10
AATTCC/AATTGG	1																																																																																																																																								1
ACACAG/CTGTGT	1																																																																																																																																								1
ACACAT/ATGTGT	3																																																																																																																																								3
ACACCC/GGGTGT		1																																																																																																																																							1
ACACGC/CGTGTG	1																																																																																																																																								1
ACAGCC/CTGTGG	1																																																																																																																																								1
ACAGCG/CGCTGT	2																																																																																																																																								2
ACAGGG/CCCTGT	2																																																																																																																																								2
ACAGTC/ACTGTG	1																																																																																																																																								1
ACATAG/ATGTCT	1																																																																																																																																								1
ACATAT/ATATGT	2																																																																																																																																								2
ACATCT/AGATGT	1																																																																																																																																								1
ACATGC/ATGTGC	1																																																																																																																																								1
ACATGG/ATGTCC	2																																																																																																																																								2
ACATGT/ACATGT	1	1																																																																																																																																							2
ACCACG/CGTGGT	1																																																																																																																																								1
ACCACT/AGTGGT	7	1	1																																																																																																																																						9
ACCAGC/CTGGTG	1	1																																																																																																																																							2
ACCATC/ATGGTG	5																																																																																																																																								5
ACCATG/ATGGTC	1																																																																																																																																								1
ACCCCC/GGGGGT	1																																																																																																																																								1
ACCCTC/AGGGTG		1																																																																																																																																							1
ACCCTG/AGGGTC	1																																																																																																																																								1
ACCGCC/CGGTGG	3																																																																																																																																								3
ACCGGC/CCGGTG		1																																																																																																																																							1
ACCGGG/CCCGGT		1																																																																																																																																							1
ACCGTC/ACGGTG	1																																																																																																																																								1
ACCTAT/AGGTAT	1																																																																																																																																								1
ACCTCC/AGGTGG	1	1																																																																																																																																							2
ACCTCG/AGGTCG	1																																																																																																																																								1
ACCTGC/AGGTGC	1																																																																																																																																								1
ACGACT/AGTCGT	1																																																																																																																																								1
ACGAGC/CGTGCT	1																																																																																																																																								1
ACGAGG/CCTCGT	4																																																																																																																																								4
ACGATC/ATCGTG	2																																																																																																																																								2
ACGATG/ATCGTC	9			1																																																																																																																																					10
ACGCAG/CGTCTG	1																																																																																																																																								1
ACGCGG/CCGCGT	1																																																																																																																																								1
ACGCTC/AGCGTG	2																																																																																																																																								2
ACGCTG/AGCGTC	2																																																																																																																																								2
ACGGAG/CCGTCT	1																																																																																																																																								1
ACGGCC/CCGTGG	3																																																																																																																																								3
ACGTAG/ACGTCT	1																																																																																																																																								1
ACTATG/AGTCAT	1																																																																																																																																								1
ACTCAG/AGTCTG	1																																																																																																																																								1
ACTCAT/AGTATG	1																																																																																																																																								1
ACTCCC/AGTGGG	1																																																																																																																																								1
ACTCTC/AGAGTG	1																																																																																																																																								1
ACTGAT/AGTATC	1																																																																																																																																								1
ACTGCC/AGTGGC	2	1																																																																																																																																							3
ACTGCG/AGTCGC	2																																																																																																																																								2
ACTGCT/AGCAGT	3																																																																																																																																								3
ACTGGC/AGTGCC	1																																																																																																																																								1
AGAGCC/CTCTGG	4																																																																																																																																								4
AGAGCG/CGCTCT	2																																																																																																																																								2
AGAGCT/AGCTCT	1	1																																																																																																																																							2
AGAGGC/CCTCTG	1	1																																																																																																																																							2
AGAGGG/CCCTCT	5	2																																																																																																																																							7
AGATCG/ATCTCG	2																																																																																																																																								2
AGATGC/ATCTGC	1																																																																																																																																								1
AGCAGG/CCTGCT	3	1																																																																																																																																							4
AGCATC/ATGCTG	3																																																																																																																																								3
AGCCAT/ATGGCT	2																																																																																																																																								2
AGCCCC/CTGGGG		1																																																																																																																																							1
AGCCCG/CGGGCT	1	1																																																																																																																																							2
AGCCGC/CGGCTG	5	1																																																																																																																																							6
AGCCGG/CCGGCT	4																																																																																																																																								4
AGCCTC/AGGCTG	1																																																																																																																																								1
AGCCTG/AGGCTC	6																																																																																																																																								6
AGCGAT/ATCGCT	1	1																																																																																																																																							2
AGCGCG/CGCGCT	1																																																																																																																																								1
AGCGGC/CCGCTG	1	2																																																																																																																																							3
AGCGGG/CCCGCT	2																																																																																																																																								2
AGCTCC/AGCTGG	4	1																																																																																																																																							5
AGCTGC/AGCTGC	1																																																																																																																																								1
AGGATC/ATCCTG	1																																																																																																																																								1
AGGATG/ATCCTC	9	2																																																																																																																																							11
AGGCCC/CCTGGG	1																																																																																																																																								1
AGGCGC/CCTGCG	1	1																																																																																																																																							2
AGGCGG/CCGCCT	3																																																																																																																																								3
AGGGAT/ATCCCT		1																																																																																																																																							1
AGGGGG/CCCCCT	3																																																																																																																																								3
ATATCC/ATATGG		1																																																																																																																																							1
ATATCG/ATATCG	1																																																																																																																																								1
ATATGC/ATATGC	1																																																																																																																																								1
ATCCCC/ATGGGG	1																																																																																																																																								1
ATCCCG/ATCGGG	2																																																																																																																																								2
ATCGCC/ATGGCG	2																																																																																																																																								2
ATCGGC/ATGCCG	2																																																																																																																																								2
CCCGCG/CGCGGG	1																																																																																																																																								1
