Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-9/megassr/results/hub_GCA_013146015.1/fasta/hub_GCA_013146015.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              123
Total size of examined sequences (bp):           37908959
Total number of identified SSRs:                 3298
Number of SSR containing sequences:              101
Number of sequences containing more than 1 SSR:  89
Number of SSRs present in compound formation:    264


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	238
2	742
3	523
4	341
5	881
6	573

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	16	19	8	4	4	4	4	4	5	1	2	3	5	4		1	2	3		4		1	1	2	3	1	1				1		1	1			2		1					1																																										1																																													125
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1	2	2	1											1														1																																																																																																						9
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	3									1	1				1											1																																																																																															1									1	11
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	17	8	11	9	4	3	4	1	2	6	1	2	3	3	2	1	1				1	1	1	1	2				1			1				2				1					1								1																																																								1													1										93
AC	-	-	-	13	2	2	1	1		1						1			1									1	1																																																																																																																								24
AG	-	-	-	28	20	11	8	4	2	3	1		2	2			1		2		2																																																																																																																																86
AT	-	-	-	76	36	12	11	12	2	3	3			1	1																																																																																																																																						157
CA	-	-	-	10	5	5	2	1				1		1						1																																																																																																																																	26
CT	-	-	-	17	5	10	6	2	5		1			2	3		1		1	1																																																																																																																																	54
GA	-	-	-	24	10	4	3	2	1			2	2						1																																																																																																																																		49
GC	-	-	-	3																																																																																																																																																	3
GT	-	-	-	7	4	5	3		1				1															1		1		1																																																																																																																					24
TA	-	-	-	104	37	18	17	11	1	3		1					1																																																																																																																																				193
TC	-	-	-	31	14	10	8	5	3	6	1	1	2		1	2		1																																																																																																																																			85
TG	-	-	-	13	7	3	2	4	1	1	2		2	1		1				1	1	2																																																																																																																															41
AAC	-	-	1	1	1						1																																																																																																																																										4
AAG	-	-	14	3	4	3	1	1	1	1			1		1		1	1																																																																																																																																			32
AAT	-	-	20	6	6	3	2																			1																																																																																																																											38
ACA	-	-	3	1					1																																																																																																																																												5
ACC	-	-	3																																																																																																																																																		3
ACG	-	-	1																																																																																																																																																		1
ACT	-	-	1						1		1																																																																																																																																										3
AGA	-	-	6	5	1	1			1	3																																																																																																																																											17
AGC	-	-	3	2		2																																																																																																																																															7
AGG	-	-	1		1																																																																																																																																																2
AGT	-	-	2	3		1																																																																																																																																															6
ATA	-	-	11	4	1																																																																																																																																																16
ATC	-	-	3	2																																																																																																																																																	5
ATG	-	-	5	2		1																																																																																																																																															8
ATT	-	-	12	2	4			1																1																																																																																																																													20
CAA	-	-	5	2	1	1																																																																																																																																															9
CAC	-	-	4																																																																																																																																																		4
CAG	-	-	4	1	3																																																																																																																																																8
CAT	-	-	6	4	1	1																																																																																																																																															12
CCA	-	-	8	1																																																																																																																																																	9
CCG	-	-	3																																																																																																																																																		3
CCT	-	-	1																																																																																																																																																		1
CGA	-	-	1	1																																																																																																																																																	2
CGC	-	-	1	1																																																																																																																																																	2
CGG	-	-	2																																																																																																																																																		2
CGT	-	-	1																																																																																																																																																		1
CTA	-	-	5					1							1		1																																																																																																																																				8
CTC	-	-	5	1																																																																																																																																																	6
CTG	-	-	4	1	1																																																																																																																																																6
CTT	-	-	15	1	5		1	1	1																																																																																																																																												24
GAA	-	-	5	1			1	1							1	1																																																																																																																																					10
GAC	-	-	1																																																																																																																																																		1
GAG	-	-	3	2	1		1																																																																																																																																														7
GAT	-	-	4	1																																																																																																																																																	5
GCA	-	-	4	4		2		1																																																																																																																																													11
GCC	-	-	8		1																																																																																																																																																9
GCG	-	-	2																																																																																																																																																		2
GCT	-	-	3	3		1																																																																																																																																															7
GGA	-	-	2	1			1							1																																																																																																																																							5
GGC	-	-	5	2																																																																																																																																																	7
GGT	-	-	5	3	2																																																																																																																																																10
GTA	-	-	2	1	2																																																																																																																																																5
GTC	-	-	2		1		1																																																																																																																																														4
GTG	-	-	6	1	1				1																																																																																																																																												9
GTT	-	-	2	3																																																																																																																																																	5
TAA	-	-	6	1																																																																																																																																																	7
TAC	-	-	1			2															1			1																																																																																																																													5
TAG	-	-	3	1		1	1																																																																																																																																														6
TAT	-	-	8	2	2	2	1			1																																																																																																																																											16
TCA	-	-	5	1	1	1																																																																																																																																															8
TCC	-	-	3	1	3	1			1																																																																																																																																												9
TCG	-	-							1																																																																																																																																												1
TCT	-	-	7	3	1	2	1																																																																																																																																														14
TGA	-	-	5	4						1								1																																																																																																																																			11
TGC	-	-	5	4	2																																																																																																																																																11
TGG	-	-	2		1	1																																																																																																																																															4
TGT	-	-	7	2	2	1	1																																																																																																																																														13
TTA	-	-	14	1	4	3	1	1		1	1																																																																																																																																										26
TTC	-	-	5	5	3	1	2			1			1	1											1																																																																																																																												20
TTG	-	-	5	4	1					1																																																																																																																																											11
AAAC	-	1	1																																																																																																																																																		2
AAAG	-	16	11	2	1		1				1																																																																																																																																										32
AAAT	-	15	4	3	1																																																																																																																																																23
AAGA	-	4	3	2																																																																																																																																																	9
AAGG	-	1																																																																																																																																																			1
AATA	-	5																																																																																																																																																			5
AATC	-	3	1																																																																																																																																																		4
AATG	-	4																																																																																																																																																			4
AATT	-	3	3																																																																																																																																																		6
ACAA	-	1																																																																																																																																																			1
ACAG	-		1																																																																																																																																																		1
ACAT	-	1	2																																																																																																																																																		3
AGAA	-	7	2	1		1			1		1																																																																																																																																										13
AGAC	-	1																																																																																																																																																			1
AGAT	-	1																																																																																																																																																			1
AGGA	-	1																																																																																																																																																			1
AGGT	-	1																																																																																																																																																			1
AGTG	-	1																																																																																																																																																			1
ATAA	-	5	1		1																																																																																																																																																7
ATAC	-	1																																																																																																																																																			1
ATAG	-	3	1			1																																																																																																																																															5
ATCA	-	2		2																																																																																																																																																	4
ATCC	-	1																																																																																																																																																			1
ATCT	-	1																																																																																																																																																			1
ATGA	-	1																																																																																																																																																			1
ATGG	-	1																																																																																																																																																			1
ATGT	-	6	1																																																																																																																																																		7
ATTA	-	5																																																																																																																																																			5
ATTC	-	1																																																																																																																																																			1
ATTT	-	6	1	1																																																																																																																																																	8
CAAG	-	1																																																																																																																																																			1
CAAT	-	1																																																																																																																																																			1
CATA	-	3		1																																																																																																																																																	4
CATC	-	1	2		1																																																																																																																																																4
CATG	-	1																																																																																																																																																			1
CCAA	-	1																																																																																																																																																			1
CCCT	-	1																																																																																																																																																			1
CCTA	-			1																																																																																																																																																	1
CTAT	-	1																																																																																																																																																			1
CTCA	-	1	1			1																																																																																																																																															3
CTCC	-	1	1	1																																																																																																																																																	3
CTTC	-	2																																																																																																																																																			2
CTTT	-	6	2		2		1																																																																																																																																														11
GAAA	-	4	2	2							1																																																																																																																																										9
GAAT	-	3	2																																																																																																																																																		5
GAGC	-	1																																																																																																																																																			1
GAGG	-			1																																																																																																																																																	1
GATA	-	2																																																																																																																																																			2
GATT	-	2	2																																																																																																																																																		4
GCCA	-	1																																																																																																																																																			1
GGTA	-	1																																																																																																																																																			1
GGTT	-		1																																																																																																																																																		1
GTAG	-	1																																																																																																																																																			1
GTAT	-	6	1			1																																																																																																																																															8
GTCA	-	1																																																																																																																																																			1
GTTG	-	1																																																																																																																																																			1
TAAA	-	5																																																																																																																																																			5
TAAT	-	3																																																																																																																																																			3
TACA	-	8	2		2	1																																																																																																																																															13
TACT	-	1																																																																																																																																																			1
TAGC	-	1																																																																																																																																																			1
TATG	-	2	1	1		1																																																																																																																																															5
TATT	-	3		1																																																																																																																																																	4
TCAA	-			1	1																																																																																																																																																2
TCAC	-	1																																																																																																																																																			1
TCAT	-	1	1																																																																																																																																																		2
TCGG	-	1																																																																																																																																																			1
TCTA	-	1																																																																																																																																																			1
TCTT	-	2	2		1																																																																																																																																																5
TGAA	-	4																																																																																																																																																			4
TGAC	-	1																																																																																																																																																			1
TGAT	-	2																																																																																																																																																			2
TGGT	-	2																																																																																																																																																			2
TGTA	-	6	5	1																																																																																																																																																	12
TTAT	-	4																																																																																																																																																			4
TTCA	-	1																																																																																																																																																			1
TTCT	-	3	1	1																																																																																																																																																	5
TTGA	-	5	1	3																																																																																																																																																	9
TTGG	-	1		1																																																																																																																																																	2
TTGT	-	1																																																																																																																																																			1
TTTA	-	7	2	1	1																																																																																																																																																11
TTTC	-	16	3	1	1	1																																																																																																																																															22
AAAAC	5																																																																																																																																																				5
AAAAG	37	18	5																																																																																																																																																		60
AAAAT	36	3	2					1																																																																																																																																													42
AAACA	3	1																																																																																																																																																			4
AAAGA	11	5	2																																																																																																																																																		18
AAAGC	2																																																																																																																																																				2
AAAGG	4			1																																																																																																																																																	5
AAAGT	1																																																																																																																																																				1
AAATA	8	2	2		1			1																																																																																																																																													14
AAATC		3																																																																																																																																																			3
AAATT	5																																																																																																																																																				5
AACAC	1																																																																																																																																																				1
AACTA	6																																																																																																																																																				6
AAGAA	17	5	1	1																																																																																																																																																	24
AAGAG				1																																																																																																																																																	1
AAGGA	2																																																																																																																																																				2
AAGGC	1																																																																																																																																																				1
AAGGG	2																																																																																																																																																				2
AAGTA	1																																																																																																																																																				1
AAGTC	1																																																																																																																																																				1
AATAA	16	4																																																																																																																																																			20
AATAT	8																																																																																																																																																				8
AATCA	2																																																																																																																																																				2
AATCC	3	1																																																																																																																																																			4
AATGC		1																																																																																																																																																			1
AATTA	6																																																																																																																																																				6
AATTC	1																																																																																																																																																				1
AATTG	1																																																																																																																																																				1
AATTT	5																																																																																																																																																				5
ACAAA	1																																																																																																																																																				1
ACAAG	1																																																																																																																																																				1
ACACC	2																																																																																																																																																				2
ACAGC	1																																																																																																																																																				1
ACAGT	1																																																																																																																																																				1
ACATC	1																																																																																																																																																				1
ACATG	2																																																																																																																																																				2
ACCAA	1																																																																																																																																																				1
ACCAG	1																																																																																																																																																				1
ACCTA			1																																																																																																																																																		1
ACGAC	1	1																																																																																																																																																			2
AGAAA	12	3																																																																																																																																																			15
AGAAG	4																																																																																																																																																				4
AGACA			1																																																																																																																																																		1
AGAGA	1																																																																																																																																																				1
AGAGG	1																																																																																																																																																				1
AGATG	2																																																																																																																																																				2
AGCAA	1																																																																																																																																																				1
AGCTG	1																																																																																																																																																				1
AGGAA	2																																																																																																																																																				2
AGGTC	1																																																																																																																																																				1
AGGTT	1																																																																																																																																																				1
AGTAC	2																																																																																																																																																				2
AGTAG	2																																																																																																																																																				2
AGTCA	1																																																																																																																																																				1
ATAAA	14	4																																																																																																																																																			18
ATAAT	2																																																																																																																																																				2
ATACA	1																																																																																																																																																				1
ATACC	2																																																																																																																																																				2
ATACT	2																																																																																																																																																				2
ATAGA		1																																																																																																																																																			1
ATATA	3																																																																																																																																																				3
ATATC	1																																																																																																																																																				1
ATATG	1																																																																																																																																																				1
ATATT	5																																																																																																																																																				5
ATCAC	1																																																																																																																																																				1
ATCCC	1	1																																																																																																																																																			2
ATCCT	1																																																																																																																																																				1
ATCTA		1																																																																																																																																																			1
ATCTC	2																																																																																																																																																				2
ATCTG		1																																																																																																																																																			1
ATGAG	1																																																																																																																																																				1
ATGAT	3																																																																																																																																																				3
ATGCA	1																																																																																																																																																				1
ATGGG	1																																																																																																																																																				1
ATGTA	1																																																																																																																																																				1
ATTAA	5																																																																																																																																																				5
ATTAT		1																																																																																																																																																			1
ATTCA	2																																																																																																																																																				2
ATTCG	1																																																																																																																																																				1
ATTGA		1																																																																																																																																																			1
ATTGG			1																																																																																																																																																		1
ATTTA	1																																																																																																																																																				1
ATTTC	4																																																																																																																																																				4
ATTTG		1																																																																																																																																																			1
ATTTT	10	3																																																																																																																																																			13
CAAAA	1	1																																																																																																																																																			2
CAAAG	1																																																																																																																																																				1
CAAAT	2																																																																																																																																																				2
CAATG	1																																																																																																																																																				1
CACCC	1																																																																																																																																																				1
CACTT	1																																																																																																																																																				1
CAGCC	1																																																																																																																																																				1
CAGGA	1																																																																																																																																																				1
CAGGT	1																																																																																																																																																				1
CAGTA	1																																																																																																																																																				1
CATAC	1																																																																																																																																																				1
CATAT	1																																																																																																																																																				1
CATCC	1																																																																																																																																																				1
CATCT			1																																																																																																																																																		1
CATGT	2																																																																																																																																																				2
CATTC	1																																																																																																																																																				1
CATTT	1																																																																																																																																																				1
CCAAA	1																																																																																																																																																				1
CCAAC	3																																																																																																																																																				3
CCACC	1																																																																																																																																																				1
CCAGT		1																																																																																																																																																			1
CCATT		1																																																																																																																																																			1
CCCAA	4																																																																																																																																																				4
CCCCT	3																																																																																																																																																				3
CCCTC	2																																																																																																																																																				2
CCGTA	2																																																																																																																																																				2
CCGTG	1																																																																																																																																																				1
CCTAA		1																																																																																																																																																			1
CCTCC	1																																																																																																																																																				1
CCTCT	1																																																																																																																																																				1
CCTTT	4																																																																																																																																																				4
CGAAC	1																																																																																																																																																				1
CGACA	1																																																																																																																																																				1
CGACT		1																																																																																																																																																			1
CGAGG		1																																																																																																																																																			1
CGCCT	1																																																																																																																																																				1
CGCGG	1																																																																																																																																																				1
CGTAC		1																																																																																																																																																			1
CGTCT	2	1																																																																																																																																																			3
CTACA	1																																																																																																																																																				1
CTAGA	1																																																																																																																																																				1
CTAGT	1	1																																																																																																																																																			2
CTCAG	1																																																																																																																																																				1
CTCAT	2																																																																																																																																																				2
CTCCG	1																																																																																																																																																				1
CTCTC	1																																																																																																																																																				1
CTCTT	3																																																																																																																																																				3
CTGTA	1																																																																																																																																																				1
CTTCC	2	1																																																																																																																																																			3
CTTTC	2																																																																																																																																																				2
CTTTG	4																																																																																																																																																				4
CTTTT	19	4	1	1	1																																																																																																																																																26
GAAAA	11	1																																																																																																																																																			12
GAAAG	3																																																																																																																																																				3
GAAAT	2																																																																																																																																																				2
GAACC	2																																																																																																																																																				2
GAAGG	2																																																																																																																																																				2
GAGAA	1	1																																																																																																																																																			2
GAGAG	1																																																																																																																																																				1
GAGCC	1																																																																																																																																																				1
GAGGA	1																																																																																																																																																				1
GAGGC	1																																																																																																																																																				1
GATAA	1																																																																																																																																																				1
GATAG	2																																																																																																																																																				2
GATAT	1																																																																																																																																																				1
GCGTG	2																																																																																																																																																				2
GCTGA	2																																																																																																																																																				2
GGAAA	4																																																																																																																																																				4
GGACC	1																																																																																																																																																				1
GGAGA	2	1																																																																																																																																																			3
GGATG	1																																																																																																																																																				1
GGATT	1																																																																																																																																																				1
GGCTG	1																																																																																																																																																				1
GGGAA	1																																																																																																																																																				1
GGGAC	1																																																																																																																																																				1
GGGAG	1																																																																																																																																																				1
GGGAT	1																																																																																																																																																				1
GGGGA	1																																																																																																																																																				1
GGGGT	1																																																																																																																																																				1
GGTAG	1	1																																																																																																																																																			2
GGTAT	1																																																																																																																																																				1
GGTCC	1																																																																																																																																																				1
GGTGA	1																																																																																																																																																				1
GGTTT	2																																																																																																																																																				2
GTACA	3																																																																																																																																																				3
GTATT	1																																																																																																																																																				1
GTCAT		1																																																																																																																																																			1
GTCCT	1																																																																																																																																																				1
GTCTA	1																																																																																																																																																				1
GTGTT	1																																																																																																																																																				1
GTTCA	1																																																																																																																																																				1
GTTCG	1																																																																																																																																																				1
GTTGG	1																																																																																																																																																				1
GTTGT	3																																																																																																																																																				3
TAAAA	8																																																																																																																																																				8
TAAAT	3	1																																																																																																																																																			4
TAACC	1																																																																																																																																																				1
TAATA	1																																																																																																																																																				1
TAATT	7																																																																																																																																																				7
TACAA	1																																																																																																																																																				1
TACAC	1																																																																																																																																																				1
TACAG	2																																																																																																																																																				2
TACAT		1																																																																																																																																																			1
TACCG	1																																																																																																																																																				1
TACCT	1																																																																																																																																																				1
TACTA	1																																																																																																																																																				1
TAGCT	1																																																																																																																																																				1
TAGTA	1																																																																																																																																																				1
TATAA	1																																																																																																																																																				1
TATAT	4																																																																																																																																																				4
TATCA	2																																																																																																																																																				2
TATTA	1	1																																																																																																																																																			2
TATTC	1																																																																																																																																																				1
TATTT	18	1	1																																																																																																																																																		20
TCAAA	1																																																																																																																																																				1
TCAGC	1																																																																																																																																																				1
TCAGG	1																																																																																																																																																				1
TCATC	1	1																																																																																																																																																			2
TCCTA	1																																																																																																																																																				1
TCCTC	1																																																																																																																																																				1
TCGGC	1																																																																																																																																																				1
TCGGG	1																																																																																																																																																				1
TCGTT		1																																																																																																																																																			1
TCTAT	1																																																																																																																																																				1
TCTCC		1																																																																																																																																																			1
TCTCT	2	1																																																																																																																																																			3
TCTTC	2																																																																																																																																																				2
TCTTT	9	3	2																																																																																																																																																		14
TGAAG	1																																																																																																																																																				1
TGAAT	2																																																																																																																																																				2
TGACA	1																																																																																																																																																				1
TGATA	1																																																																																																																																																				1
TGATC		2																																																																																																																																																			2
TGATT	1																																																																																																																																																				1
TGCAT	1	1	1																																																																																																																																																		3
TGGAG	1																																																																																																																																																				1
TGGCT	1																																																																																																																																																				1
TGGGT	2																																																																																																																																																				2
TGTAC	1																																																																																																																																																				1
TGTAT	1																																																																																																																																																				1
TGTCA	1																																																																																																																																																				1
TGTCT	1																																																																																																																																																				1
TGTGG	1																																																																																																																																																				1
TGTTT	1																																																																																																																																																				1
TTAAA	4																																																																																																																																																				4
TTAAT	11																																																																																																																																																				11
TTAGA	1																																																																																																																																																				1
TTAGT	1																																																																																																																																																				1
TTATA	4																																																																																																																																																				4
TTATT	16	1																																																																																																																																																			17
TTCAG	1																																																																																																																																																				1
TTCAT	2																																																																																																																																																				2
TTCCC	2																																																																																																																																																				2
TTCCT	2																																																																																																																																																				2
TTCTC	1																																																																																																																																																				1
TTCTT	8	1						1																																																																																																																																													10
TTGCA	2																																																																																																																																																				2
TTGCG	1																																																																																																																																																				1
TTGGT	2																																																																																																																																																				2
TTGTC	1																																																																																																																																																				1
TTGTT	1																																																																																																																																																				1
TTTAA	2																																																																																																																																																				2
TTTAT	18	4	1																																																																																																																																																		23
TTTCA	2		1																																																																																																																																																		3
TTTCC	1	2																																																																																																																																																			3
TTTCG	1																																																																																																																																																				1
TTTCT	14	5	3																																																																																																																																																		22
TTTGA	1	1																																																																																																																																																			2
TTTGT	1																																																																																																																																																				1
TTTTA	23	8	2	1																																																																																																																																																	34
TTTTC	42	12	2																																																																																																																																																		56
TTTTG	3	2																																																																																																																																																			5
AAAAAC	3																																																																																																																																																				3
AAAAAG	12	4																																																																																																																																																			16
AAAAAT	7	7		1																																																																																																																																																	15
AAAACA	2																																																																																																																																																				2
AAAAGA	8	1	2																																																																																																																																																		11
AAAAGC	2																																																																																																																																																				2
AAAAGG	1	1																																																																																																																																																			2
AAAATA	11	1							1																																																																																																																																												13
AAAATC	1																																																																																																																																																				1
AAAATT	2																																																																																																																																																				2
AAACAG	1																																																																																																																																																				1
AAACCC	1																																																																																																																																																				1
AAAGAA	2		1																																																																																																																																																		3
AAAGAG	1																																																																																																																																																				1
AAAGCA	1																																																																																																																																																				1
AAAGCC	1																																																																																																																																																				1
AAAGGA	1																																																																																																																																																				1
AAAGGG	1																																																																																																																																																				1
AAAGTG	1																																																																																																																																																				1
AAATAA	3																																																																																																																																																				3
AAATGA	1																																																																																																																																																				1
AAATTA	3																																																																																																																																																				3
AACAGG	2																																																																																																																																																				2
AACCCA	1																																																																																																																																																				1
AACCCC		1																																																																																																																																																			1
AACCTG	1																																																																																																																																																				1
AAGAAA	5																																																																																																																																																				5
AAGAAC	1																																																																																																																																																				1
AAGAGG	1	1																																																																																																																																																			2
AAGCCG			1																																																																																																																																																		1
AAGGAG	1																																																																																																																																																				1
AATAAA	4		1																																																																																																																																																		5
AATATT	3																																																																																																																																																				3
AATGTA	1																																																																																																																																																				1
AATTAT	1																																																																																																																																																				1
AATTTT	1																																																																																																																																																				1
ACAACT	1																																																																																																																																																				1
ACAATT	1																																																																																																																																																				1
ACAGAA	1																																																																																																																																																				1
ACCAAC	1																																																																																																																																																				1
ACCCCA	1																																																																																																																																																				1
ACCGCC	1																																																																																																																																																				1
ACGACC	2																																																																																																																																																				2
ACGTCA	1																																																																																																																																																				1
ACTACC	1																																																																																																																																																				1
AGAAAA	2																																																																																																																																																				2
AGAAAC	1																																																																																																																																																				1
AGAAAG	1																																																																																																																																																				1
AGAAAT	1																																																																																																																																																				1
AGAATG	1																																																																																																																																																				1
AGACAA	1																																																																																																																																																				1
AGACGT	1																																																																																																																																																				1
AGAGAA	1																																																																																																																																																				1
AGAGCC	1																																																																																																																																																				1
AGAGCG	1																																																																																																																																																				1
AGCCGC	1																																																																																																																																																				1
AGCTCT	1																																																																																																																																																				1
AGCTGC	1																																																																																																																																																				1
AGGAAA	2																																																																																																																																																				2
AGGAGC	1																																																																																																																																																				1
AGGCGA	1																																																																																																																																																				1
AGGCGG	1																																																																																																																																																				1
AGGTGG	1																																																																																																																																																				1
AGTAGA	1																																																																																																																																																				1
AGTCCA			1																																																																																																																																																		1
AGTGGT							1																																																																																																																																														1
ATAAAA	4																																																																																																																																																				4
ATAAGA	1																																																																																																																																																				1
ATAATC	1																																																																																																																																																				1
ATAATT	1																																																																																																																																																				1
ATATAC	1																																																																																																																																																				1
ATATCG	1																																																																																																																																																				1
ATATTA	5																																																																																																																																																				5
ATATTT	1																																																																																																																																																				1
ATCATA	1																																																																																																																																																				1
ATCATG	1																																																																																																																																																				1
ATCGCC	1																																																																																																																																																				1
ATCGTG	1																																																																																																																																																				1
ATCTTC	1																																																																																																																																																				1
ATGAGA	1																																																																																																																																																				1
ATGCCA	1																																																																																																																																																				1
ATGTAC	1																																																																																																																																																				1
ATTATA	2																																																																																																																																																				2
ATTGAC	1																																																																																																																																																				1
ATTGGG	1																																																																																																																																																				1
ATTTAA	2	2																																																																																																																																																			4
ATTTTT	6																																																																																																																																																				6
CAACAG	2																																																																																																																																																				2
CACATT	1																																																																																																																																																				1
CACCAA	1																																																																																																																																																				1
CACCAG		1																																																																																																																																																			1
CAGAAA	1																																																																																																																																																				1
CAGAAG	2																																																																																																																																																				2
CAGCAA	2																																																																																																																																																				2
CAGCAT	1																																																																																																																																																				1
CAGCTC	1																																																																																																																																																				1
CAGCTT	1																																																																																																																																																				1
CAGGCT		2																																																																																																																																																			2
CAGTAA	1																																																																																																																																																				1
CAGTCA		1																																																																																																																																																			1
CAGTGG		1																																																																																																																																																			1
CATACA	1																																																																																																																																																				1
CATACT	1																																																																																																																																																				1
CATCAA	1																																																																																																																																																				1
CATCGT	1																																																																																																																																																				1
CATCTT		1																																																																																																																																																			1
CATGAA	1																																																																																																																																																				1
CATTGG	1																																																																																																																																																				1
CCAAAT	1																																																																																																																																																				1
CCAACA	1																																																																																																																																																				1
CCACGG	1																																																																																																																																																				1
CCACTG	1																																																																																																																																																				1
CCAGGT	1																																																																																																																																																				1
CCATGT	1																																																																																																																																																				1
CCATTA	1																																																																																																																																																				1
CCATTC	1																																																																																																																																																				1
CCCACA		1																																																																																																																																																			1
CCCATG	1																																																																																																																																																				1
CCCCAC	1																																																																																																																																																				1
CCCTCT	1		1																																																																																																																																																		2
CCGATG	1																																																																																																																																																				1
CCGCCT	1		1																																																																																																																																																		2
CCGGAG	1																																																																																																																																																				1
CCTCAC	1																																																																																																																																																				1
CCTCTC	2	1																																																																																																																																																			3
CCTGCC	1																																																																																																																																																				1
CCTGCG	1																																																																																																																																																				1
CCTGTC	1																																																																																																																																																				1
CCTTGC	1																																																																																																																																																				1
CGACTC	1																																																																																																																																																				1
CGATAG		1																																																																																																																																																			1
CGATCC	1																																																																																																																																																				1
CGCCAG	1																																																																																																																																																				1
CGCCGA	1																																																																																																																																																				1
CGCCGT	1																																																																																																																																																				1
CGCTCA	1																																																																																																																																																				1
CGCTGC	1																																																																																																																																																				1
CGGAGC	1																																																																																																																																																				1
CGGCAG	1																																																																																																																																																				1
CGGCGC	1																																																																																																																																																				1
CGGGTT		1																																																																																																																																																			1
CGTGAT	1																																																																																																																																																				1
CTAATT	1																																																																																																																																																				1
CTATGA	1																																																																																																																																																				1
CTCACA	1																																																																																																																																																				1
CTCACT		1																																																																																																																																																			1
CTCAGA	1																																																																																																																																																				1
CTCATC	2																																																																																																																																																				2
CTCTTC	1																																																																																																																																																				1
CTGATA	1																																																																																																																																																				1
CTGCGG	1																																																																																																																																																				1
CTGCTA	1																																																																																																																																																				1
CTGCTC	1																																																																																																																																																				1
CTGGAG	1																																																																																																																																																				1
CTGGCT	1																																																																																																																																																				1
CTGGGG	1																																																																																																																																																				1
CTGTGG	1																																																																																																																																																				1
CTGTTG	1	1																																																																																																																																																			2
CTTCGT	1																																																																																																																																																				1
CTTCTC	1																																																																																																																																																				1
CTTGTT	1																																																																																																																																																				1
CTTTGT	1																																																																																																																																																				1
CTTTTA	1																																																																																																																																																				1
CTTTTT	5	3	1	1																																																																																																																																																	10
GAAAAA	3																																																																																																																																																				3
GAAAAG	1																																																																																																																																																				1
GAAGAC	3																																																																																																																																																				3
GAAGAG	2	1																																																																																																																																																			3
GAAGGA		1																																																																																																																																																			1
GAAGTG	1																																																																																																																																																				1
GAATTG	1																																																																																																																																																				1
GACAAC	1																																																																																																																																																				1
GACAAT	1																																																																																																																																																				1
GACAGC	1																																																																																																																																																				1
GACGAG	2																																																																																																																																																				2
GAGAAT	1																																																																																																																																																				1
GAGCCA	2																																																																																																																																																				2
GAGCCC		2																																																																																																																																																			2
GAGCGC	1																																																																																																																																																				1
GAGGAA	2	1																																																																																																																																																			3
GAGGAC	1																																																																																																																																																				1
GAGGAT	1																																																																																																																																																				1
GAGGGA		1																																																																																																																																																			1
GAGGTC	1																																																																																																																																																				1
GATAGG		1																																																																																																																																																			1
GATATT	1																																																																																																																																																				1
GATCCC	1																																																																																																																																																				1
GATGAC	1																																																																																																																																																				1
GATGAG	1																																																																																																																																																				1
GATGGT	1																																																																																																																																																				1
GATGTT	1																																																																																																																																																				1
GCAGCG	1																																																																																																																																																				1
GCAGGA	1																																																																																																																																																				1
GCAGTA	1																																																																																																																																																				1
GCATCA	1																																																																																																																																																				1
GCATCG	1																																																																																																																																																				1
GCATTG		1																																																																																																																																																			1
GCCACC	1																																																																																																																																																				1
GCCACG	1																																																																																																																																																				1
GCCATT	1																																																																																																																																																				1
GCCGAC		1																																																																																																																																																			1
GCCGCT		1																																																																																																																																																			1
GCGATG	1																																																																																																																																																				1
GCGCGG	1																																																																																																																																																				1
GCGGCA	2																																																																																																																																																				2
GCTAGA		1																																																																																																																																																			1
GCTCCC	1																																																																																																																																																				1
GCTCTC	1																																																																																																																																																				1
GCTGCA	1																																																																																																																																																				1
GCTGCG	1																																																																																																																																																				1
GCTGGA	1																																																																																																																																																				1
GCTTCC	1																																																																																																																																																				1
GCTTCG	1																																																																																																																																																				1
GGAAAA	1																																																																																																																																																				1
GGAAAT		1																																																																																																																																																			1
GGAGAA	1																																																																																																																																																				1
GGAGAG	1																																																																																																																																																				1
GGAGCA	1																																																																																																																																																				1
GGAGCC	1																																																																																																																																																				1
GGAGCG		1																																																																																																																																																			1
GGAGGG	1																																																																																																																																																				1
GGATGG	1																																																																																																																																																				1
GGATTG	1																																																																																																																																																				1
GGCCCA	1																																																																																																																																																				1
GGCGGA	1																																																																																																																																																				1
GGCTCC	1																																																																																																																																																				1
GGCTGC	4		1																																																																																																																																																		5
GGGACC	1																																																																																																																																																				1
GGGATT		1																																																																																																																																																			1
GGGGAG	1																																																																																																																																																				1
GGGGGA	2																																																																																																																																																				2
GGGTTG	1																																																																																																																																																				1
GGTACT	1																																																																																																																																																				1
GGTGGC	1																																																																																																																																																				1
GGTGTG	1																																																																																																																																																				1
GGTTAT	1																																																																																																																																																				1
GTATAT	1																																																																																																																																																				1
GTCAAA	1																																																																																																																																																				1
GTCATC	1																																																																																																																																																				1
GTCGCA	1																																																																																																																																																				1
GTCGGA	1																																																																																																																																																				1
GTGGCC	1																																																																																																																																																				1
GTGGGT	1																																																																																																																																																				1
GTGGTA				1																																																																																																																																																	1
GTGGTT	1																																																																																																																																																				1
GTGTAT	1																																																																																																																																																				1
GTGTGC	1																																																																																																																																																				1
GTGTTA	1																																																																																																																																																				1
GTTGCA	1																																																																																																																																																				1
GTTGTC	1																																																																																																																																																				1
GTTTGG	2																																																																																																																																																				2
TAAAAA	2	1																																																																																																																																																			3
TAAAAT		1																																																																																																																																																			1
TAAATT	1																																																																																																																																																				1
TAATAC	1																																																																																																																																																				1
TAATAT	6																																																																																																																																																				6
TAATTA	1																																																																																																																																																				1
TAGAAA	1																																																																																																																																																				1
TAGTGG	1																																																																																																																																																				1
TATAAT	1																																																																																																																																																				1
TATAGA	1																																																																																																																																																				1
TATCGT	1																																																																																																																																																				1
TATCTT	1																																																																																																																																																				1
TATTAA	4																																																																																																																																																				4
TATTTC	2																																																																																																																																																				2
TATTTT	3																																																																																																																																																				3
TCAACA	1																																																																																																																																																				1
TCAGCC	1																																																																																																																																																				1
TCAGGA	1																																																																																																																																																				1
TCATCG	2	1																																																																																																																																																			3
TCATTC	1																																																																																																																																																				1
TCATTT	1																																																																																																																																																				1
TCCAGC	1																																																																																																																																																				1
TCCCAA	1																																																																																																																																																				1
TCCCCC	1																																																																																																																																																				1
TCCCGA	1																																																																																																																																																				1
TCCCTC	1																																																																																																																																																				1
TCCCTG	1																																																																																																																																																				1
TCCTCA	1	1																																																																																																																																																			2
TCCTGT	1																																																																																																																																																				1
TCGCAA	1																																																																																																																																																				1
TCGCAG			1																																																																																																																																																		1
TCGCGG	1																																																																																																																																																				1
TCGCTA	1																																																																																																																																																				1
TCGGGC	1																																																																																																																																																				1
TCGGTC	1																																																																																																																																																				1
TCGTCA	2																																																																																																																																																				2
TCGTCT	1																																																																																																																																																				1
TCTACC	1																																																																																																																																																				1
TCTATT	1																																																																																																																																																				1
TCTCCT	1																																																																																																																																																				1
TCTCTT	1																																																																																																																																																				1
TCTGCG	1																																																																																																																																																				1
TCTTCA		1																																																																																																																																																			1
TCTTCC	2																																																																																																																																																				2
TCTTGG	1																																																																																																																																																				1
TCTTGT	1	1																																																																																																																																																			2
TCTTTC		1																																																																																																																																																			1
TCTTTT	4	2																																																																																																																																																			6
TGAAAC		1																																																																																																																																																			1
TGAATG	1																																																																																																																																																				1
TGACGA			1																																																																																																																																																		1
TGACGC	1																																																																																																																																																				1
TGCAGA	1																																																																																																																																																				1
TGCAGC	1																																																																																																																																																				1
TGCCCT	1																																																																																																																																																				1
TGCTGT	2																																																																																																																																																				2
TGGAGC			1																																																																																																																																																		1
TGGATG	1																																																																																																																																																				1
TGGGTT	1																																																																																																																																																				1
TGGTCT	1																																																																																																																																																				1
TGGTGA	2																																																																																																																																																				2
TGGTGT	1																																																																																																																																																				1
TGGTTG	1																																																																																																																																																				1
TGTCCT	1																																																																																																																																																				1
TGTGGT			1																																																																																																																																																		1
TGTTGC	1	1																																																																																																																																																			2
TTAAAA	1																																																																																																																																																				1
TTAATA	5																																																																																																																																																				5
TTAATT	2																																																																																																																																																				2
TTACTA	1																																																																																																																																																				1
TTATTT	5																																																																																																																																																				5
TTCCTT	1																																																																																																																																																				1
TTCTCA		1																																																																																																																																																			1
TTCTCT	1																																																																																																																																																				1
TTCTTG	1																																																																																																																																																				1
TTCTTT	2																																																																																																																																																				2
TTGCCA	1																																																																																																																																																				1
TTGGGA	1	1																																																																																																																																																			2
TTGTAG	1																																																																																																																																																				1
TTTAAT	1																																																																																																																																																				1
TTTAGA	2																																																																																																																																																				2
TTTATA	1																																																																																																																																																				1
TTTATT	4	2																																																																																																																																																			6
TTTCAA		1																																																																																																																																																			1
TTTCAT	1																																																																																																																																																				1
TTTCCG	1																																																																																																																																																				1
TTTCCT		1																																																																																																																																																			1
TTTCTT	7	2																																																																																																																																																			9
TTTGGT	1																																																																																																																																																				1
TTTTAA	4																																																																																																																																																				4
TTTTAC	1																																																																																																																																																				1
TTTTAT	4	1																																																																																																																																																			5
TTTTCC		1																																																																																																																																																			1
TTTTCT	4	1																																																																																																																																																			5
TTTTGG	1																																																																																																																																																				1
TTTTTA	14		1	1																																																																																																																																																	16
TTTTTC	13	3	1																																																																																																																																																		17

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	32	24	30	17	8	7	8	5	6	11	2	4	6	8	6	1	2	2	3		5	1	2	2	4	3	1	1	1			2		1	1	2		2		2					2								1																																		1																						1													1										218
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	4	2	2	1						1	1				2											1			1																																																																																												1									1	20
AC/GT	-	-	-	43	18	15	8	6	2	2	2	1	3	2		2			1	2	1	2						2	1	1		1																																																																																																																					115
AG/CT	-	-	-	100	49	35	25	13	11	9	3	3	6	4	4	2	2	1	4	1	2																																																																																																																																274
AT/AT	-	-	-	180	73	30	28	23	3	6	3	1		1	1		1																																																																																																																																				350
CG/CG	-	-	-	3																																																																																																																																																	3
AAC/GTT	-	-	23	13	5	2	1		1	1	1																																																																																																																																										47
AAG/CTT	-	-	52	18	14	7	6	3	3	5			2	1	2	1	1	1							1																																																																																																																												117
AAT/ATT	-	-	71	16	17	8	4	2		2	1													1		1																																																																																																																											123
ACC/GGT	-	-	28	5	4	1			1																																																																																																																																												39
ACG/CGT	-	-	6	1	1		1		1																																																																																																																																												10
ACT/AGT	-	-	14	5	2	4	1	1	1		1				1		1				1			1																																																																																																																													33
AGC/CTG	-	-	23	15	6	5		1																																																																																																																																													50
AGG/CCT	-	-	15	5	5	1	2		1					1																																																																																																																																							30
ATC/ATG	-	-	28	14	2	3				1								1																																																																																																																																			49
CCG/CGG	-	-	21	3	1																																																																																																																																																25
AAAC/GTTT	-	3	1																																																																																																																																																		4
AAAG/CTTT	-	58	26	9	5	2	2		1		3																																																																																																																																										106
AAAT/ATTT	-	50	8	6	3																																																																																																																																																67
AACC/GGTT	-	5	1	1																																																																																																																																																	7
AAGC/CTTG	-	1																																																																																																																																																			1
AAGG/CCTT	-	4																																																																																																																																																			4
AAGT/ACTT	-	1																																																																																																																																																			1
AATC/ATTG	-	15	4	6	1																																																																																																																																																26
AATG/ATTC	-	15	3																																																																																																																																																		18
AATT/AATT	-	11	3																																																																																																																																																		14
ACAG/CTGT	-	1	1																																																																																																																																																		2
ACAT/ATGT	-	33	12	3	2	3																																																																																																																																															53
ACCG/CGGT	-	1																																																																																																																																																			1
ACCT/AGGT	-	3		1																																																																																																																																																	4
ACTC/AGTG	-	3	1			1																																																																																																																																															5
ACTG/AGTC	-	2																																																																																																																																																			2
AGAT/ATCT	-	9	1			1																																																																																																																																															11
AGCC/CTGG	-	1																																																																																																																																																			1
AGCG/CGCT	-	1																																																																																																																																																			1
AGCT/AGCT	-	1																																																																																																																																																			1
AGGG/CCCT	-	2	1	2																																																																																																																																																	5
ATCC/ATGG	-	3	2		1																																																																																																																																																6
ATGC/ATGC	-	1																																																																																																																																																			1
AAAAC/GTTTT	16	4																																																																																																																																																			20
AAAAG/CTTTT	180	57	16	2	1			1																																																																																																																																													257
AAAAT/ATTTT	167	30	8	1	1			2																																																																																																																																													209
AAACC/GGTTT	6																																																																																																																																																				6
AAACG/CGTTT	1	1																																																																																																																																																			2
AAACT/AGTTT	7																																																																																																																																																				7
AAAGC/CTTTG	8																																																																																																																																																				8
AAAGG/CCTTT	24	2		1																																																																																																																																																	27
AAAGT/ACTTT	2																																																																																																																																																				2
AAATC/ATTTG	7	5																																																																																																																																																			12
AAATG/ATTTC	11		1																																																																																																																																																		12
AAATT/AATTT	49	1																																																																																																																																																			50
AACAC/GTGTT	5																																																																																																																																																				5
AACCC/GGGTT	10																																																																																																																																																				10
AACCG/CGGTT	4																																																																																																																																																				4
AACCT/AGGTT	2	1	1																																																																																																																																																		4
AACGC/CGTTG	1																																																																																																																																																				1
AACTG/AGTTC	2																																																																																																																																																				2
AAGAC/CTTGT	3		1																																																																																																																																																		4
AAGAG/CTCTT	14	2		1																																																																																																																																																	17
AAGAT/ATCTT	1																																																																																																																																																				1
AAGCC/CTTGG	1																																																																																																																																																				1
AAGCT/AGCTT	1																																																																																																																																																				1
AAGGC/CCTTG	1																																																																																																																																																				1
AAGGG/CCCTT	9	1																																																																																																																																																			10
AAGGT/ACCTT	1																																																																																																																																																				1
AAGTC/ACTTG	2																																																																																																																																																				2
AAGTG/ACTTC	2																																																																																																																																																				2
AATAC/ATTGT	4																																																																																																																																																				4
AATAG/ATTCT	2	1																																																																																																																																																			3
AATAT/ATATT	29	2																																																																																																																																																			31
AATCC/ATTGG	4	1	1																																																																																																																																																		6
AATCG/ATTCG	1																																																																																																																																																				1
AATCT/AGATT	1	1																																																																																																																																																			2
AATGC/ATTGC	5	2	1																																																																																																																																																		8
AATGG/ATTCC	1	1																																																																																																																																																			2
AATGT/ACATT	1	1																																																																																																																																																			2
AATTC/AATTG	6	1																																																																																																																																																			7
ACACC/GGTGT	3																																																																																																																																																				3
ACACG/CGTGT	2	1																																																																																																																																																			3
ACACT/AGTGT	2																																																																																																																																																				2
ACAGC/CTGTG	1																																																																																																																																																				1
ACAGG/CCTGT	2																																																																																																																																																				2
ACAGT/ACTGT	11																																																																																																																																																				11
ACATC/ATGTG	2																																																																																																																																																				2
ACATG/ATGTC	6	1																																																																																																																																																			7
ACCAG/CTGGT	1																																																																																																																																																				1
ACCAT/ATGGT	4																																																																																																																																																				4
ACCCC/GGGGT	3																																																																																																																																																				3
ACCCG/CGGGT	1																																																																																																																																																				1
ACCCT/AGGGT	1	1																																																																																																																																																			2
ACCGG/CCGGT	2																																																																																																																																																				2
ACCGT/ACGGT	3	1																																																																																																																																																			4
ACCTC/AGGTG	1																																																																																																																																																				1
ACCTG/AGGTC	3																																																																																																																																																				3
ACGAG/CGTCT	2	1																																																																																																																																																			3
ACGCC/CGTGG	2																																																																																																																																																				2
ACGGC/CCGTG	1																																																																																																																																																				1
ACGGG/CCCGT	1																																																																																																																																																				1
ACTAG/AGTCT	3	1																																																																																																																																																			4
ACTAT/AGTAT	4																																																																																																																																																				4
ACTCC/AGTGG	1																																																																																																																																																				1
ACTCG/AGTCG		1																																																																																																																																																			1
ACTCT/AGAGT	2																																																																																																																																																				2
ACTGG/AGTCC		1																																																																																																																																																			1
AGAGG/CCTCT	8	2																																																																																																																																																			10
AGATC/ATCTG		3																																																																																																																																																			3
AGATG/ATCTC	8	1	1																																																																																																																																																		10
AGCCC/CTGGG	2																																																																																																																																																				2
AGCCG/CGGCT	2																																																																																																																																																				2
AGCGG/CCGCT	1																																																																																																																																																				1
AGCTC/AGCTG	5																																																																																																																																																				5
AGGAT/ATCCT	4																																																																																																																																																				4
AGGCG/CCTCG	2	1																																																																																																																																																			3
AGGGG/CCCCT	8																																																																																																																																																				8
ATATC/ATATG	10																																																																																																																																																				10
ATCCC/ATGGG	5	1																																																																																																																																																			6
CCGCG/CGCGG	1																																																																																																																																																				1
AAAAAC/GTTTTT	5																																																																																																																																																				5
AAAAAG/CTTTTT	67	16	5	1																																																																																																																																																	89
AAAAAT/ATTTTT	67	12	2	2					1																																																																																																																																												84
AAAACC/GGTTTT	2																																																																																																																																																				2
AAAAGC/CTTTTG	3																																																																																																																																																				3
AAAAGG/CCTTTT	7	3																																																																																																																																																			10
AAAAGT/ACTTTT	2																																																																																																																																																				2
AAAATC/ATTTTG	1																																																																																																																																																				1
AAAATG/ATTTTC	3																																																																																																																																																				3
AAAATT/AATTTT	14	1																																																																																																																																																			15
AAACAG/CTGTTT	4																																																																																																																																																				4
AAACCC/GGGTTT	5																																																																																																																																																				5
AAACGG/CCGTTT	1																																																																																																																																																				1
AAACTG/AGTTTC		1																																																																																																																																																			1
AAAGAC/CTTTGT	2																																																																																																																																																				2
AAAGAG/CTCTTT	5	1																																																																																																																																																			6
AAAGAT/ATCTTT	1																																																																																																																																																				1
AAAGCC/CTTTGG	1																																																																																																																																																				1
AAAGGG/CCCTTT	1																																																																																																																																																				1
AAAGTC/ACTTTG	1																																																																																																																																																				1
AAAGTG/ACTTTC	1																																																																																																																																																				1
AAATAG/ATTTCT	5																																																																																																																																																				5
AAATAT/ATATTT	2																																																																																																																																																				2
AAATCC/ATTTGG	1																																																																																																																																																				1
AAATCT/AGATTT	2																																																																																																																																																				2
AAATGG/ATTTCC		1																																																																																																																																																			1
AAATGT/ACATTT	1																																																																																																																																																				1
AAATTG/AATTTC		1																																																																																																																																																			1
AAATTT/AAATTT	3	2																																																																																																																																																			5
AACAAG/CTTGTT	4	1																																																																																																																																																			5
AACACC/GGTGTT	4																																																																																																																																																				4
AACACT/AGTGTT	1																																																																																																																																																				1
AACAGC/CTGTTG	8	2																																																																																																																																																			10
AACAGG/CCTGTT	3																																																																																																																																																				3
AACAGT/ACTGTT	1																																																																																																																																																				1
AACATC/ATGTTG	3																																																																																																																																																				3
AACATG/ATGTTC	1																																																																																																																																																				1
AACCAC/GGTTGT	2		1																																																																																																																																																		3
AACCAT/ATGGTT	1																																																																																																																																																				1
AACCCC/GGGGTT	2	1																																																																																																																																																			3
AACCCG/CGGGTT		1																																																																																																																																																			1
AACCTG/AGGTTC	1																																																																																																																																																				1
AACGAC/CGTTGT	2																																																																																																																																																				2
AACGAT/ATCGTT	1																																																																																																																																																				1
AACGTC/ACGTTG	1																																																																																																																																																				1
AACTAC/AGTTGT	2																																																																																																																																																				2
AACTGC/AGTTGC	1																																																																																																																																																				1
AAGAAT/ATTCTT	1																																																																																																																																																				1
AAGACC/CTTGGT	2																																																																																																																																																				2
AAGACG/CGTCTT	5																																																																																																																																																				5
AAGAGG/CCTCTT	8	3																																																																																																																																																			11
AAGATG/ATCTTC	1	2																																																																																																																																																			3
AAGCAG/CTGCTT	2																																																																																																																																																				2
AAGCCG/CGGCTT	1		1																																																																																																																																																		2
AAGCGG/CCGCTT	1																																																																																																																																																				1
AAGCTG/AGCTTC	1																																																																																																																																																				1
AAGGAC/CCTTGT	1																																																																																																																																																				1
AAGGAG/CCTTCT	4	1																																																																																																																																																			5
AAGGCG/CCTTCG	1																																																																																																																																																				1
AAGGGC/CCCTTG	2																																																																																																																																																				2
AAGTAG/ACTTCT	1																																																																																																																																																				1
AAGTCC/ACTTGG			1																																																																																																																																																		1
AAGTGG/ACTTCC	1																																																																																																																																																				1
AATACT/AGTATT	1																																																																																																																																																				1
AATAGT/ACTATT	1																																																																																																																																																				1
AATATC/ATATTG	1																																																																																																																																																				1
AATATT/AATATT	23																																																																																																																																																				23
AATCAT/ATGATT	2																																																																																																																																																				2
AATCCC/ATTGGG	4	2																																																																																																																																																			6
AATCGC/ATTGCG	1																																																																																																																																																				1
AATGAC/ATTGTC	1																																																																																																																																																				1
AATGAG/ATTCTC	4	1																																																																																																																																																			5
AATGCC/ATTGGC	2	1																																																																																																																																																			3
AATGGC/ATTGCC	2																																																																																																																																																				2
AATGGG/ATTCCC	1																																																																																																																																																				1
AATGGT/ACCATT	1																																																																																																																																																				1
AATGTC/ACATTG	1																																																																																																																																																				1
AATGTG/ACATTC	2																																																																																																																																																				2
AATTAC/AATTGT	1																																																																																																																																																				1
AATTAG/AATTCT	1																																																																																																																																																				1
AATTAT/AATTAT	6																																																																																																																																																				6
AATTCC/AATTGG	1																																																																																																																																																				1
ACACAT/ATGTGT	2																																																																																																																																																				2
ACACCC/GGGTGT	2	1																																																																																																																																																			3
ACACGC/CGTGTG	1																																																																																																																																																				1
ACACTC/AGTGTG	1																																																																																																																																																				1
ACAGCC/CTGTGG	1																																																																																																																																																				1
ACAGCG/CGCTGT	1																																																																																																																																																				1
ACAGGG/CCCTGT	2																																																																																																																																																				2
ACAGTC/ACTGTG		1																																																																																																																																																			1
ACATAT/ATATGT	2																																																																																																																																																				2
ACATCC/ATGTGG	1																																																																																																																																																				1
ACATGG/ATGTCC	1																																																																																																																																																				1
ACATGT/ACATGT	1																																																																																																																																																				1
ACCACG/CGTGGT	2																																																																																																																																																				2
ACCACT/AGTGGT	2			1			1																																																																																																																																														4
ACCAGC/CTGGTG		1																																																																																																																																																			1
ACCAGT/ACTGGT	1																																																																																																																																																				1
ACCATC/ATGGTG	3																																																																																																																																																				3
ACCCCC/GGGGGT	1																																																																																																																																																				1
ACCCTC/AGGGTG	1																																																																																																																																																				1
ACCGAG/CGGTCT	1																																																																																																																																																				1
ACCGCC/CGGTGG	3																																																																																																																																																				3
ACCGCG/CGCGGT	1																																																																																																																																																				1
ACCGGG/CCCGGT	1																																																																																																																																																				1
ACCTCC/AGGTGG	1																																																																																																																																																				1
ACCTCG/AGGTCG	1																																																																																																																																																				1
ACCTCT/AGAGGT	1																																																																																																																																																				1
ACCTGG/AGGTCC	1																																																																																																																																																				1
ACGAGG/CCTCGT	3																																																																																																																																																				3
ACGATC/ATCGTG	2																																																																																																																																																				2
ACGATG/ATCGTC	7	1	1																																																																																																																																																		9
ACGCAG/CGTCTG	1																																																																																																																																																				1
ACGCCG/CGGCGT	1	1																																																																																																																																																			2
ACGCTC/AGCGTG	1																																																																																																																																																				1
ACGCTG/AGCGTC	1																																																																																																																																																				1
ACGGCC/CCGTGG	3																																																																																																																																																				3
ACGGCG/CCGTCG	1																																																																																																																																																				1
ACGTAG/ACGTCT	1																																																																																																																																																				1
ACTATG/AGTCAT	1																																																																																																																																																				1
ACTCAG/AGTCTG	1																																																																																																																																																				1
ACTCAT/AGTATG	1																																																																																																																																																				1
ACTCCG/AGTCGG	2																																																																																																																																																				2
ACTCTC/AGAGTG		1																																																																																																																																																			1
ACTGAT/AGTATC	1																																																																																																																																																				1
ACTGCC/AGTGGC	1	1																																																																																																																																																			2
ACTGCG/AGTCGC	1		1																																																																																																																																																		2
ACTGCT/AGCAGT	2																																																																																																																																																				2
AGAGCC/CTCTGG	4																																																																																																																																																				4
AGAGCG/CGCTCT	2																																																																																																																																																				2
AGAGCT/AGCTCT	1	1																																																																																																																																																			2
AGAGGG/CCCTCT	5	2	1																																																																																																																																																		8
AGATAT/ATATCT	1																																																																																																																																																				1
AGATGC/ATCTGC	1																																																																																																																																																				1
AGCAGG/CCTGCT	4																																																																																																																																																				4
AGCATC/ATGCTG	2																																																																																																																																																				2
AGCCCC/CTGGGG	1																																																																																																																																																				1
AGCCCG/CGGGCT	1	2																																																																																																																																																			3
AGCCGC/CGGCTG	7		1																																																																																																																																																		8
AGCCGG/CCGGCT	4																																																																																																																																																				4
AGCCTC/AGGCTG	1																																																																																																																																																				1
AGCCTG/AGGCTC		2																																																																																																																																																			2
AGCGAT/ATCGCT	1	1																																																																																																																																																			2
AGCGCC/CGCTGG	1																																																																																																																																																				1
AGCGCG/CGCGCT	1																																																																																																																																																				1
AGCGGC/CCGCTG	5	1																																																																																																																																																			6
AGCGGG/CCCGCT	1	1																																																																																																																																																			2
AGCTCC/AGCTGG	4		1																																																																																																																																																		5
AGCTGC/AGCTGC	3																																																																																																																																																				3
AGGATC/ATCCTG	1																																																																																																																																																				1
AGGATG/ATCCTC	5	1																																																																																																																																																			6
AGGCCC/CCTGGG	1																																																																																																																																																				1
AGGCGC/CCTGCG	1																																																																																																																																																				1
AGGCGG/CCGCCT	3		1																																																																																																																																																		4
AGGGAT/ATCCCT		1																																																																																																																																																			1
AGGGGC/CCCCTG	1																																																																																																																																																				1
AGGGGG/CCCCCT	5																																																																																																																																																				5
ATATCG/ATATCG	1																																																																																																																																																				1
ATCATG/ATCATG	1																																																																																																																																																				1
ATCCCC/ATGGGG	1																																																																																																																																																				1
ATCCCG/ATCGGG	3																																																																																																																																																				3
ATCGCC/ATGGCG	2																																																																																																																																																				2
ATCGGC/ATGCCG	2																																																																																																																																																				2
ATGCCC/ATGGGC	1																																																																																																																																																				1
CCCGCG/CGCGGG	1																																																																																																																																																				1
CCGGCG/CCGGCG	1																																																																																																																																																				1
