Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-5/megassr/results/hub_GCA_013146005.1/fasta/hub_GCA_013146005.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              192
Total size of examined sequences (bp):           39346150
Total number of identified SSRs:                 3415
Number of SSR containing sequences:              139
Number of sequences containing more than 1 SSR:  117
Number of SSRs present in compound formation:    314


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	373
2	724
3	522
4	378
5	842
6	576

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	14	16	9	7	8	4	13	8	10	7	3	2	3	3	3		4	2	1	2	2	1	2	2	1	3	4				3	1	1	1		2	2	1	1	3	2		1						1	1		1															1					1			1													1				1																																			181
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	1	1				1					1						1												1																																																																																																		8
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-			2	4		2						1			1		1																													1																																																																																		12
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	18	14	13	13	8	10	8	6	11	5	4	4	4	3	5	2	2	1	3	3	3		2				3	2	2	1	1	1	2	3			3			1	1					1	2								1		1										1																										1						1												1																1	172
AC	-	-	-	13	2	4	4	2	1	1	1			1	1		1	1									1																																																																																																																						33
AG	-	-	-	27	14	10	6	4	1	3	2		2	1	1	1	1			1	1																																																																																																																												75
AT	-	-	-	103	29	25	9	9	9	2	2	1	2	1	1																																																																																																																																		193
CA	-	-	-	8	4		2	2		1		2		1		1			1																																																																																																																														22
CG	-	-	-	1																																																																																																																																													1
CT	-	-	-	18	11	5	4	4				1	1				1					1																																																																																																																											46
GA	-	-	-	18	5	4	6	3	2	2	1	1	1								1			1																																																																																																																									45
GC	-	-	-	3																																																																																																																																													3
GT	-	-	-	7		6	2	2	1		1	1		1							1		1							1																																																																																																																			24
TA	-	-	-	91	40	11	12	12	15	3	2	1	3		2																																																																																																																																		192
TC	-	-	-	22	11	6	9	6		1	2				2			1																																																																																																																															60
TG	-	-	-	12	5	1	2	2	1	2			1	1	2							1																																																																																																																											30
AAC	-	-	4	1	1	1																																																																																																																																											7
AAG	-	-	9	3		2	1																																																																																																																																										15
AAT	-	-	9	10	3	2	1					1	1																																																																																																																																				27
ACA	-	-	5	3			1																																																																																																																																										9
ACC	-	-	2	1	1																																																																																																																																												4
ACG	-	-	1	1																																																																																																																																													2
ACT	-	-	4				1		1	1																																																																																																																																							7
AGA	-	-	2	3	2	1	1		2									1																			1																																																																																																												13
AGC	-	-	7	1					1																																																																																																																																								9
AGG	-	-	2	2			1																																																																																																																																										5
AGT	-	-	3		2				1															1																																																																																																																									7
ATA	-	-	9	4	2		1				1																																																																																																																																						17
ATC	-	-	6	1	2						1																																																																																																																																						10
ATG	-	-	3	2	1	2																																																																																																																																											8
ATT	-	-	6	5	6	2	1	1		2		1																																																																																																																																					24
CAA	-	-	4	2	1	1	1																																																																																																																																										9
CAC	-	-	1	2	1	1																																																																																																																																											5
CAG	-	-	10	1	2	2																																																																																																																																											15
CAT	-	-	10	2											1																																																																																																																																		13
CCA	-	-	3	1																																																																																																																																													4
CCG	-	-	2	1	1																																																																																																																																												4
CCT	-	-	3	2			1			1	1																																																																																																																																						8
CGA	-	-	3																																																																																																																																														3
CGC	-	-	1																																																																																																																																														1
CGG	-	-	1	1					1																																																																																																																																								3
CGT	-	-	1																																																																																																																																														1
CTA	-	-		1	1							1							1																																																																																																																														4
CTC	-	-	2	1																																																																																																																																													3
CTG	-	-	7	3			2	1																																																																																																																																									13
CTT	-	-	15	5	3	3		1	1														1																																																																																																																										29
GAA	-	-	7	1				1	1																																																																																																																																								10
GAC	-	-	1	1																																																																																																																																													2
GAG	-	-	3																																																																																																																																														3
GAT	-	-	2	1						1																																																																																																																																							4
GCA	-	-	1		1																																																																																																																																												2
GCC	-	-	4	1		1																																																																																																																																											6
GCT	-	-	2	3																																																																																																																																													5
GGA	-	-	4	2	1			1				1																																																																																																																																					9
GGC	-	-	6	2		1																																																																																																																																											9
GGT	-	-	6	5																																																																																																																																													11
GTA	-	-	2	1				1							1	1		1																																																																																																																															7
GTC	-	-	6																																																																																																																																														6
GTG	-	-	2	1																																																																																																																																													3
GTT	-	-	6	1	2								1																																																																																																																																				10
TAA	-	-	7	1	3																																																																																																																																												11
TAC	-	-	3					2				1				1																																																																																																																																	7
TAG	-	-	1		1		1	1							1		2																																																																																																																																7
TAT	-	-	8	2	1		1	1																																																																																																																																									13
TCA	-	-	9	1			1																																																																																																																																										11
TCC	-	-	2		2				1																																																																																																																																								5
TCG	-	-	2		1					1																																																																																																																																							4
TCT	-	-	6	1	3	1			1																																																																																																																																								12
TGA	-	-	2	3	1								1								1																																																																																																																												8
TGC	-	-	5	1	3		1																																																																																																																																										10
TGG	-	-	4	2	2																																																																																																																																												8
TGT	-	-	5	2	1																			1																																																																																																																									9
TTA	-	-	15	5	1	1		1	1	1																																																																																																																																							25
TTC	-	-	9	2		2	2		1		2		1							1		1																																																																																																																											21
TTG	-	-	3	2																																																																																																																																													5
AAAC	-		1																																																																																																																																														1
AAAG	-	18	6	2				1																																																																																																																																									27
AAAT	-	19	2																																																																																																																																														21
AAGA	-	13	2	1																																																																																																																																													16
AAGC	-	1																																																																																																																																															1
AAGG	-	1																																																																																																																																															1
AATA	-	3	1	1																																																																																																																																													5
AATC	-	1	1	1																																																																																																																																													3
AATG	-	1																																																																																																																																															1
AATT	-	3																																																																																																																																															3
ACAA	-		1																																																																																																																																														1
ACAT	-	2																																																																																																																																															2
ACCA	-	1																																																																																																																																															1
ACTA	-		1																																																																																																																																														1
ACTC	-	1																																																																																																																																															1
AGAA	-	2	7	1																																																																																																																																													10
AGAC	-	3																																																																																																																																															3
AGAT	-	1																																																																																																																																															1
AGTG	-	1																																																																																																																																															1
ATAA	-	3																																																																																																																																															3
ATAC	-	3	1	1																																																																																																																																													5
ATAG	-		1																																																																																																																																														1
ATCA	-	2						1																																																																																																																																									3
ATCC	-	1																																																																																																																																															1
ATGG	-	1		1																																																																																																																																													2
ATGT	-	6	3	1																																																																																																																																													10
ATTA	-	4	1																																																																																																																																														5
ATTC	-	1	1		1																																																																																																																																												3
ATTG	-	1																																																																																																																																															1
ATTT	-	7	2																																																																																																																																														9
CAAA	-	1																																																																																																																																															1
CAAT	-	1		2	1																																																																																																																																												4
CAGA	-		1																																																																																																																																														1
CAGT	-	1																																																																																																																																															1
CATA	-	2	1	1																																																																																																																																													4
CATC	-	1																																																																																																																																															1
CATT	-	2																																																																																																																																															2
CCAA	-	1																																																																																																																																															1
CCAT	-	1																																																																																																																																															1
CCCT	-		1																																																																																																																																														1
CTAC	-	3																																																																																																																																															3
CTAT	-	1																																																																																																																																															1
CTCA	-	3	1																																																																																																																																														4
CTCC	-	2																																																																																																																																															2
CTCG	-	1																																																																																																																																															1
CTTC	-	1																																																																																																																																															1
CTTT	-	8	1	1																																																																																																																																													10
GAAA	-	5	3	1	2				1																																																																																																																																								12
GAAG	-	2	1																																																																																																																																														3
GAAT	-	1	1	1																																																																																																																																													3
GACT	-	1																																																																																																																																															1
GATG	-	1																																																																																																																																															1
GATT	-	1	1																																																																																																																																														2
GCCT	-	1																																																																																																																																															1
GCTT	-	2																																																																																																																																															2
GGAA	-	1																																																																																																																																															1
GGCA	-	1																																																																																																																																															1
GGGA	-		1																																																																																																																																														1
GTAG	-	1			1																																																																																																																																												2
GTAT	-	2	1		1		1																																																																																																																																										5
GTCC	-	1																																																																																																																																															1
GTCG	-	1																																																																																																																																															1
GTGA	-	1																																																																																																																																															1
GTTA	-	1																																																																																																																																															1
GTTT	-		1																																																																																																																																														1
TAAA	-	5																																																																																																																																															5
TAAC	-	1																																																																																																																																															1
TAAT	-	1																																																																																																																																															1
TACA	-	12		2									1																																																																																																																																				15
TAGA	-	1	1																																																																																																																																														2
TATC	-	2		1																																																																																																																																													3
TATG	-	4	2	1																																																																																																																																													7
TATT	-	4	3																																																																																																																																														7
TCAA	-	4	1																																																																																																																																														5
TCAC	-				2																																																																																																																																												2
TCAT	-		2	1																																																																																																																																													3
TCCA	-		1																																																																																																																																														1
TCGG	-	1																																																																																																																																															1
TCTA	-	3	1																																																																																																																																														4
TCTG	-	1																																																																																																																																															1
TCTT	-	2	1	1		1			1																																																																																																																																								6
TGAA	-	1	1																																																																																																																																														2
TGAG	-	2																																																																																																																																															2
TGAT	-	2																																																																																																																																															2
TGCC	-	1																																																																																																																																															1
TGGT	-	1																																																																																																																																															1
TGTA	-	8		3	2																																																																																																																																												13
TGTT	-	1																																																																																																																																															1
TTAA	-	3																																																																																																																																															3
TTAT	-	7	3	1																																																																																																																																													11
TTCA	-	2																																																																																																																																															2
TTCT	-	2		2																																																																																																																																													4
TTGA	-	7	4	4																																																																																																																																													15
TTGG	-	1																																																																																																																																															1
TTGT	-	1	1																																																																																																																																														2
TTTA	-	10	5																																																																																																																																														15
TTTC	-	9	4	4																																																																																																																																													17
AAAAC	2																																																																																																																																																2
AAAAG	30	8	4																																																																																																																																														42
AAAAT	24	8	4	1																																																																																																																																													37
AAACA	2																																																																																																																																																2
AAACG	1																																																																																																																																																1
AAAGA	14	2	1	1																																																																																																																																													18
AAAGG	2																																																																																																																																																2
AAATA	12	4		1																																																																																																																																													17
AAATC	1																																																																																																																																																1
AAATG	1																																																																																																																																																1
AAATT	2																																																																																																																																																2
AACAT	1																																																																																																																																																1
AACCA	2																																																																																																																																																2
AACTA	2																																																																																																																																																2
AAGAA	17	3																																																																																																																																															20
AAGAC			1																																																																																																																																														1
AAGAG	1																																																																																																																																																1
AAGCA		1																																																																																																																																															1
AAGCG	1																																																																																																																																																1
AAGGA	1																																																																																																																																																1
AAGGG	2																																																																																																																																																2
AATAA	7	2																																																																																																																																															9
AATAT	4																																																																																																																																																4
AATCC	2																																																																																																																																																2
AATGC		1																																																																																																																																															1
AATGG	1																																																																																																																																																1
AATTA	4																																																																																																																																																4
AATTC	1																																																																																																																																																1
AATTG	1																																																																																																																																																1
AATTT	2																																																																																																																																																2
ACACG			1																																																																																																																																														1
ACAGC	1																																																																																																																																																1
ACAGG		1																																																																																																																																															1
ACCAC		1																																																																																																																																															1
ACCAG	1																																																																																																																																																1
ACCCA	1																																																																																																																																																1
ACCCT	1																																																																																																																																																1
ACCTG	1																																																																																																																																																1
ACTAC	1																																																																																																																																																1
ACTAG	1																																																																																																																																																1
ACTAT	1																																																																																																																																																1
ACTTG	1																																																																																																																																																1
AGAAA	18	4	1																																																																																																																																														23
AGAAG	6	2																																																																																																																																															8
AGACA	1																																																																																																																																																1
AGAGA	2																																																																																																																																																2
AGAGG	1																																																																																																																																																1
AGATA	3																																																																																																																																																3
AGATG	1																																																																																																																																																1
AGCAA	1																																																																																																																																																1
AGCAT	1																																																																																																																																																1
AGCCA	1																																																																																																																																																1
AGGAA	1																																																																																																																																																1
AGGCA	1																																																																																																																																																1
AGGGA	2																																																																																																																																																2
AGGTA	1																																																																																																																																																1
AGGTG	1																																																																																																																																																1
AGGTT	2																																																																																																																																																2
AGTAC	1																																																																																																																																																1
AGTGC	1																																																																																																																																																1
ATAAA	13	3																																																																																																																																															16
ATAAT	2																																																																																																																																																2
ATACT	2																																																																																																																																																2
ATAGA	1																																																																																																																																																1
ATAGG	1																																																																																																																																																1
ATATA	2																																																																																																																																																2
ATATC	1																																																																																																																																																1
ATATG	1																																																																																																																																																1
ATATT	9																																																																																																																																																9
ATCAC	1																																																																																																																																																1
ATCAT	1																																																																																																																																																1
ATCCC	2																																																																																																																																																2
ATCTA	2	1																																																																																																																																															3
ATCTC	2																																																																																																																																																2
ATCTT	1																																																																																																																																																1
ATGAT	1																																																																																																																																																1
ATGCA	1	1																																																																																																																																															2
ATGGG	1																																																																																																																																																1
ATGTC	1																																																																																																																																																1
ATTAA	3																																																																																																																																																3
ATTAG	1																																																																																																																																																1
ATTAT	5																																																																																																																																																5
ATTCA	1																																																																																																																																																1
ATTCC	1																																																																																																																																																1
ATTGA	2																																																																																																																																																2
ATTTA	2																																																																																																																																																2
ATTTG	2																																																																																																																																																2
ATTTT	14	1																																																																																																																																															15
CAAAA	1																																																																																																																																																1
CAAAG	1																																																																																																																																																1
CAAAT	1																																																																																																																																																1
CAATG	1																																																																																																																																																1
CACGG	1																																																																																																																																																1
CACTG	1																																																																																																																																																1
CAGAC	2																																																																																																																																																2
CAGTA	1																																																																																																																																																1
CAGTC	1																																																																																																																																																1
CATAC	1																																																																																																																																																1
CATCT	1	1																																																																																																																																															2
CATGT	1																																																																																																																																																1
CATTC	1																																																																																																																																																1
CATTT	4																																																																																																																																																4
CCAAA	1																																																																																																																																																1
CCAAC	2																																																																																																																																																2
CCACG	1																																																																																																																																																1
CCAGT	1																																																																																																																																																1
CCATA	1																																																																																																																																																1
CCATG	2																																																																																																																																																2
CCCAA	2	1																																																																																																																																															3
CCCCT	3																																																																																																																																																3
CCCGC	1																																																																																																																																																1
CCCTT		1																																																																																																																																															1
CCGTA	1																																																																																																																																																1
CCTAA		1																																																																																																																																															1
CCTCC	1																																																																																																																																																1
CCTCT	2																																																																																																																																																2
CCTTT	1																																																																																																																																																1
CGAAC	1																																																																																																																																																1
CGACA	1																																																																																																																																																1
CGACT		1																																																																																																																																															1
CGATG	1																																																																																																																																																1
CGCAT	1																																																																																																																																																1
CGCGA	1																																																																																																																																																1
CGCGG	1																																																																																																																																																1
CGTCT	1																																																																																																																																																1
CTAAA	2	1																																																																																																																																															3
CTACA	1																																																																																																																																																1
CTAGT	1	1																																																																																																																																															2
CTATA	1																																																																																																																																																1
CTATC	1																																																																																																																																																1
CTCAG	1																																																																																																																																																1
CTCCC	1																																																																																																																																																1
CTCCG	1																																																																																																																																																1
CTCTT	1																																																																																																																																																1
CTGAA		1																																																																																																																																															1
CTGGT	1																																																																																																																																																1
CTGTA		1																																																																																																																																															1
CTTGT	1																																																																																																																																																1
CTTTC	3																																																																																																																																																3
CTTTG	1																																																																																																																																																1
CTTTT	18	7																																																																																																																																															25
GAAAA	19	2		1																																																																																																																																													22
GAAAC		1																																																																																																																																															1
GAAAG		2																																																																																																																																															2
GAAAT	2																																																																																																																																																2
GAACA	1																																																																																																																																																1
GAAGA	2																																																																																																																																																2
GAAGG	2																																																																																																																																																2
GAATA	1																																																																																																																																																1
GAATT	1																																																																																																																																																1
GACAG	2																																																																																																																																																2
GACCT	1																																																																																																																																																1
GAGAA	2																																																																																																																																																2
GAGAG	2																																																																																																																																																2
GAGAT	1																																																																																																																																																1
GAGGA	1																																																																																																																																																1
GAGGG	4																																																																																																																																																4
GAGTC	2																																																																																																																																																2
GATAA	1																																																																																																																																																1
GATCT	1																																																																																																																																																1
GATGA	1																																																																																																																																																1
GATTA	3																																																																																																																																																3
GCAGT	1																																																																																																																																																1
GCATT	1																																																																																																																																																1
GCTGA	1																																																																																																																																																1
GCTTT	2																																																																																																																																																2
GGAAA	1		1																																																																																																																																														2
GGAAG	2																																																																																																																																																2
GGAAT	1																																																																																																																																																1
GGAGG	1																																																																																																																																																1
GGAGT	1																																																																																																																																																1
GGATT	1																																																																																																																																																1
GGCGA	1																																																																																																																																																1
GGCTC	1																																																																																																																																																1
GGCTG	1																																																																																																																																																1
GGGAA	1																																																																																																																																																1
GGGAC	1																																																																																																																																																1
GGGAT	2																																																																																																																																																2
GGGCT	1																																																																																																																																																1
GGGGA	1																																																																																																																																																1
GGGTG	1																																																																																																																																																1
GGTAG	2																																																																																																																																																2
GGTAT	1																																																																																																																																																1
GGTGA	1																																																																																																																																																1
GGTTA	1																																																																																																																																																1
GGTTT	1																																																																																																																																																1
GTACA	1	2																																																																																																																																															3
GTACC	1																																																																																																																																																1
GTACT	1																																																																																																																																																1
GTAGA	1																																																																																																																																																1
GTATA	1																																																																																																																																																1
GTATG		1																																																																																																																																															1
GTATT	1																																																																																																																																																1
GTCAT		1																																																																																																																																															1
GTCTA	1																																																																																																																																																1
GTGGT	1																																																																																																																																																1
GTTCG	1																																																																																																																																																1
GTTGG	2																																																																																																																																																2
TAAAA	7		1																																																																																																																																														8
TAAAT	7	1																																																																																																																																															8
TAACC	4																																																																																																																																																4
TAATA	4																																																																																																																																																4
TAATC	1																																																																																																																																																1
TAATT	4																																																																																																																																																4
TACAG	2																																																																																																																																																2
TACAT	1																																																																																																																																																1
TACCA	1																																																																																																																																																1
TACGG	1																																																																																																																																																1
TACGT	1																																																																																																																																																1
TAGAA	1																																																																																																																																																1
TAGAT	1																																																																																																																																																1
TAGCT	1																																																																																																																																																1
TAGGT	1																																																																																																																																																1
TAGTA	1																																																																																																																																																1
TAGTC	1																																																																																																																																																1
TATAA	2																																																																																																																																																2
TATAC	1																																																																																																																																																1
TATAT	5																																																																																																																																																5
TATCA	1	1																																																																																																																																															2
TATCG	1																																																																																																																																																1
TATGC	1																																																																																																																																																1
TATGG	1																																																																																																																																																1
TATTA	1																																																																																																																																																1
TATTC	1																																																																																																																																																1
TATTG	1																																																																																																																																																1
TATTT	8	2																																																																																																																																															10
TCAAA	1																																																																																																																																																1
TCACC	1																																																																																																																																																1
TCAGC	2																																																																																																																																																2
TCATA	1																																																																																																																																																1
TCATC	1																																																																																																																																																1
TCATT	1																																																																																																																																																1
TCCAA		1																																																																																																																																															1
TCCTA	2																																																																																																																																																2
TCCTG	2																																																																																																																																																2
TCTAT	2	1																																																																																																																																															3
TCTCT	2																																																																																																																																																2
TCTGA	1																																																																																																																																																1
TCTTC	1																																																																																																																																																1
TCTTT	5	2	1																																																																																																																																														8
TGAAA	1																																																																																																																																																1
TGAAT	1																																																																																																																																																1
TGAGG	1																																																																																																																																																1
TGATA	1																																																																																																																																																1
TGATT	1																																																																																																																																																1
TGCAT	1																																																																																																																																																1
TGCCT	1																																																																																																																																																1
TGGAT	1																																																																																																																																																1
TGTAC	3																																																																																																																																																3
TGTAT	1																																																																																																																																																1
TGTCG	1																																																																																																																																																1
TGTCT	1																																																																																																																																																1
TGTGG	1																																																																																																																																																1
TGTTG		1																																																																																																																																															1
TGTTT	1	1																																																																																																																																															2
TTAAA	1																																																																																																																																																1
TTAAT	1																																																																																																																																																1
TTAGG	1																																																																																																																																																1
TTATG	1																																																																																																																																																1
TTATT	22	1	1																																																																																																																																														24
TTCAA	1																																																																																																																																																1
TTCAT	2																																																																																																																																																2
TTCCA	1																																																																																																																																																1
TTCCT	3																																																																																																																																																3
TTCTT	11	4	1	1																																																																																																																																													17
TTGAA	1																																																																																																																																																1
TTGCT	1																																																																																																																																																1
TTGGT	2																																																																																																																																																2
TTGTT	4																																																																																																																																																4
TTTAA	4																																																																																																																																																4
TTTAC	1																																																																																																																																																1
TTTAG	1																																																																																																																																																1
TTTAT	15	3	1																																																																																																																																														19
TTTCA	3																																																																																																																																																3
TTTCC	1	1																																																																																																																																															2
TTTCG			1																																																																																																																																														1
TTTCT	18	5	3																																																																																																																																														26
TTTGA	1																																																																																																																																																1
TTTGG	1																																																																																																																																																1
TTTTA	20	6		1																																																																																																																																													27
TTTTC	41	14	5	1	1																																																																																																																																												62
TTTTG				1																																																																																																																																													1
AAAAAC	2																																																																																																																																																2
AAAAAG	15	1	1																																																																																																																																														17
AAAAAT	13	4						1																																																																																																																																									18
AAAACA	2																																																																																																																																																2
AAAAGA	5		1																																																																																																																																														6
AAAAGC	1	1																																																																																																																																															2
AAAATA	6	1	1	2																																																																																																																																													10
AAAATC	1																																																																																																																																																1
AAAATG	1																																																																																																																																																1
AAAATT	1																																																																																																																																																1
AAACAG		1																																																																																																																																															1
AAACTG	1																																																																																																																																																1
AAAGAA	6																																																																																																																																																6
AAAGAG	1																																																																																																																																																1
AAAGCC	1																																																																																																																																																1
AAATAA	9	1																																																																																																																																															10
AAATCC	1																																																																																																																																																1
AAATTA	6																																																																																																																																																6
AACAAG	1	1																																																																																																																																															2
AACACA	1																																																																																																																																																1
AACCAG	1																																																																																																																																																1
AACCCC	2																																																																																																																																																2
AACGGA	1																																																																																																																																																1
AAGAAA	3					1																																																																																																																																											4
AAGAAC	1																																																																																																																																																1
AAGAGA	1																																																																																																																																																1
AAGCAA	1																																																																																																																																																1
AAGCTG	1																																																																																																																																																1
AATAAA	3																																																																																																																																																3
AATAAC		1																																																																																																																																															1
AATATT	1																																																																																																																																																1
AATGAG	1																																																																																																																																																1
AATTTT	1																																																																																																																																																1
ACAAGA		1																																																																																																																																															1
ACACGA	1																																																																																																																																																1
ACACGG	1																																																																																																																																																1
ACAGTC	1																																																																																																																																																1
ACGATG	1																																																																																																																																																1
ACTCAT	1																																																																																																																																																1
ACTGGC		1																																																																																																																																															1
AGAAAA	6																																																																																																																																																6
AGAAAG	1																																																																																																																																																1
AGAAGG	1																																																																																																																																																1
AGAATC	1	1																																																																																																																																															2
AGAATG	1																																																																																																																																																1
AGACAA	1																																																																																																																																																1
AGACGT	1																																																																																																																																																1
AGAGAA	1																																																																																																																																																1
AGAGCC	1			1																																																																																																																																													2
AGAGGA	1																																																																																																																																																1
AGATCG	1																																																																																																																																																1
AGCATG	1																																																																																																																																																1
AGCTCT	1																																																																																																																																																1
AGGAAT	1																																																																																																																																																1
AGGCCC	1																																																																																																																																																1
AGGGAA	1																																																																																																																																																1
AGGTGG			1																																																																																																																																														1
AGTACC	1																																																																																																																																																1
AGTATA	1																																																																																																																																																1
ATAAAA	4																																																																																																																																																4
ATAACT	1																																																																																																																																																1
ATAATC	1																																																																																																																																																1
ATAATT	1																																																																																																																																																1
ATAGAA	1																																																																																																																																																1
ATATCA		1																																																																																																																																															1
ATGACC	1																																																																																																																																																1
ATGCTG	1																																																																																																																																																1
ATGGTA	1																																																																																																																																																1
ATGTAC	1																																																																																																																																																1
ATGTTG	1																																																																																																																																																1
ATTAAA	2																																																																																																																																																2
ATTAAT		1																																																																																																																																															1
ATTCTC		1																																																																																																																																															1
ATTGTG	1																																																																																																																																																1
ATTTAA		2																																																																																																																																															2
ATTTAG	1				1																																																																																																																																												2
ATTTTA	1																																																																																																																																																1
ATTTTT	1																																																																																																																																																1
CAAAAG	1																																																																																																																																																1
CAACAC	1																																																																																																																																																1
CAACAG	2		1																																																																																																																																														3
CAACAT	1																																																																																																																																																1
CAACCA	1	1																																																																																																																																															2
CAACGA	1																																																																																																																																																1
CAAGAA	1																																																																																																																																																1
CAAGCA	1																																																																																																																																																1
CAATGC	1																																																																																																																																																1
CAATTC	1																																																																																																																																																1
CACAAA	1																																																																																																																																																1
CACCAA	1																																																																																																																																																1
CACCAT	1																																																																																																																																																1
CACGAT	1	1																																																																																																																																															2
CACTTT	1																																																																																																																																																1
CAGAAG		1																																																																																																																																															1
CAGAGC	1																																																																																																																																																1
CAGCAA	1																																																																																																																																																1
CAGCCG	1																																																																																																																																																1
CAGCGC	1																																																																																																																																																1
CAGGAA	1																																																																																																																																																1
CAGGGG	1																																																																																																																																																1
CAGTGG	2																																																																																																																																																2
CATACT	1																																																																																																																																																1
CATCAA				1																																																																																																																																													1
CATCAC	1																																																																																																																																																1
CATCGG	1																																																																																																																																																1
CATGTG	1																																																																																																																																																1
CATTTA			1																																																																																																																																														1
CATTTT	1																																																																																																																																																1
CCAAAG	1																																																																																																																																																1
CCAACG	1																																																																																																																																																1
CCAATC		1																																																																																																																																															1
CCACAA	1																																																																																																																																																1
CCACGG	1																																																																																																																																																1
CCACTT	1																																																																																																																																																1
CCAGAC	1																																																																																																																																																1
CCAGAG	1																																																																																																																																																1
CCAGCT	1																																																																																																																																																1
CCAGGT	1																																																																																																																																																1
CCCCAC	1																																																																																																																																																1
CCCCAG	1																																																																																																																																																1
CCCGCC	1																																																																																																																																																1
CCCTCT	1																																																																																																																																																1
CCGCCT	1																																																																																																																																																1
CCGCTG	1																																																																																																																																																1
CCTATT	1																																																																																																																																																1
CCTCAC	1																																																																																																																																																1
CCTCTT		1																																																																																																																																															1
CCTGCC	1																																																																																																																																																1
CCTGCG	1																																																																																																																																																1
CCTTCC	1																																																																																																																																																1
CCTTTG	1																																																																																																																																																1
CCTTTT	1		1																																																																																																																																														2
CGAACC	1																																																																																																																																																1
CGACAC	1																																																																																																																																																1
CGACTC	1																																																																																																																																																1
CGAGAC	1																																																																																																																																																1
CGATCC	1																																																																																																																																																1
CGATCG	1																																																																																																																																																1
CGATGA	1																																																																																																																																																1
CGCACA	1																																																																																																																																																1
CGCAGC	1	1																																																																																																																																															2
CGCCAG	1																																																																																																																																																1
CGCCGA	2																																																																																																																																																2
CGCTCA	1																																																																																																																																																1
CGGCAG		1																																																																																																																																															1
CGGCGC	1																																																																																																																																																1
CGGCTG	1																																																																																																																																																1
CGGGTT	1																																																																																																																																																1
CGTCCG	1																																																																																																																																																1
CGTGAT	1																																																																																																																																																1
CTATAT	1																																																																																																																																																1
CTATGA	1																																																																																																																																																1
CTCACC	1																																																																																																																																																1
CTCAGA		1																																																																																																																																															1
CTCATC	1																																																																																																																																																1
CTGAAC	1																																																																																																																																																1
CTGATG	1																																																																																																																																																1
CTGCCA	1																																																																																																																																																1
CTGCTC	1																																																																																																																																																1
CTGGCT	1																																																																																																																																																1
CTGTTG		1																																																																																																																																															1
CTTCTC	1																																																																																																																																																1
CTTTGG	1																																																																																																																																																1
CTTTTC	1																																																																																																																																																1
CTTTTT	4		1																																																																																																																																														5
GAAAAA	2	2																																																																																																																																															4
GAAAAG	1																																																																																																																																																1
GAAAGA	1																																																																																																																																																1
GAAGAG		1																																																																																																																																															1
GAATCC	1																																																																																																																																																1
GAATTA	1																																																																																																																																																1
GACAAG	1																																																																																																																																																1
GACGCA	1																																																																																																																																																1
GACTGC	1																																																																																																																																																1
GAGAAA	1	1																																																																																																																																															2
GAGAGT	1																																																																																																																																																1
GAGCCA	1																																																																																																																																																1
GAGCCC		1																																																																																																																																															1
GAGGAA	3																																																																																																																																																3
GAGGAC	3																																																																																																																																																3
GAGGAT	3	1																																																																																																																																															4
GAGGGC	2																																																																																																																																																2
GAGTTG	1																																																																																																																																																1
GATAGG	1																																																																																																																																																1
GATCCC	1																																																																																																																																																1
GATCGA	1																																																																																																																																																1
GATGAA	1																																																																																																																																																1
GATGAC	2																																																																																																																																																2
GATGAG	1																																																																																																																																																1
GATGGA	1																																																																																																																																																1
GATTAT	1																																																																																																																																																1
GATTGG		1																																																																																																																																															1
GCAAAA	1																																																																																																																																																1
GCAACA					1																																																																																																																																												1
GCACCT	1																																																																																																																																																1
GCCACC	1																																																																																																																																																1
GCCACG	1																																																																																																																																																1
GCCATC	1																																																																																																																																																1
GCCTCG	1																																																																																																																																																1
GCCTGA	1		1																																																																																																																																														2
GCGATG	1																																																																																																																																																1
GCGATT	1																																																																																																																																																1
GCGCTC	1																																																																																																																																																1
GCGGCA		1																																																																																																																																															1
GCTCAT		1																																																																																																																																															1
GCTGCA	1																																																																																																																																																1
GCTGCG	1																																																																																																																																																1
GCTGGA	1																																																																																																																																																1
GCTGGT	1																																																																																																																																																1
GCTTCG	1																																																																																																																																																1
GGAAAT	1																																																																																																																																																1
GGAATT	1																																																																																																																																																1
GGAGAA	2																																																																																																																																																2
GGAGCC	2	1																																																																																																																																															3
GGAGGC	1																																																																																																																																																1
GGAGGG	2																																																																																																																																																2
GGATGA	1																																																																																																																																																1
GGATGG	1																																																																																																																																																1
GGATTC	1																																																																																																																																																1
GGCACA		1																																																																																																																																															1
GGCAGC	1																																																																																																																																																1
GGCATT	1																																																																																																																																																1
GGCGGA	1																																																																																																																																																1
GGCGGT	1																																																																																																																																																1
GGCTGC	1																																																																																																																																																1
GGCTTC	1																																																																																																																																																1
GGGAGG	1																																																																																																																																																1
GGGGTA	1																																																																																																																																																1
GGGTTG	1																																																																																																																																																1
GGTCAC	1																																																																																																																																																1
GGTGTG	1																																																																																																																																																1
GTAAAA	1																																																																																																																																																1
GTAGTC	1																																																																																																																																																1
GTATGG		1																																																																																																																																															1
GTATGT	1																																																																																																																																																1
GTCAGA	1																																																																																																																																																1
GTCATG	2																																																																																																																																																2
GTCTTA	1																																																																																																																																																1
GTGAGA		1																																																																																																																																															1
GTGCTC	1																																																																																																																																																1
GTGCTT	1																																																																																																																																																1
GTGGCC	1																																																																																																																																																1
GTGGCG	1																																																																																																																																																1
GTGTTG	1																																																																																																																																																1
GTGTTT	1																																																																																																																																																1
GTTACT	1																																																																																																																																																1
GTTCAG	1																																																																																																																																																1
GTTGCT	1																																																																																																																																																1
GTTGGC	1																																																																																																																																																1
GTTGTC	1																																																																																																																																																1
TAAAAA	3																																																																																																																																																3
TAAATC	1																																																																																																																																																1
TAACAC	1																																																																																																																																																1
TAATAT	1																																																																																																																																																1
TAATTA	1																																																																																																																																																1
TAATTT	1																																																																																																																																																1
TACACA		1																																																																																																																																															1
TACTAT	1																																																																																																																																																1
TAGAAA	1																																																																																																																																																1
TAGTGC	1																																																																																																																																																1
TATAAA	1																																																																																																																																																1
TATAAT	1																																																																																																																																																1
TATATC		1																																																																																																																																															1
TATCAC	1																																																																																																																																																1
TATCGC	1																																																																																																																																																1
TATCTA	1																																																																																																																																																1
TATCTT		1																																																																																																																																															1
TATGCA	1																																																																																																																																																1
TATTAA	2																																																																																																																																																2
TATTTT	6	1																																																																																																																																															7
TCACAT	1																																																																																																																																																1
TCACGA	1																																																																																																																																																1
TCACGG	1																																																																																																																																																1
TCAGGG	1																																																																																																																																																1
TCATCC	1																																																																																																																																																1
TCATTT	1																																																																																																																																																1
TCCAGC	1	1																																																																																																																																															2
TCCATC	1																																																																																																																																																1
TCCCCT	1																																																																																																																																																1
TCCCTC	2																																																																																																																																																2
TCCTCA	1																																																																																																																																																1
TCCTCT	1																																																																																																																																																1
TCCTTT	1																																																																																																																																																1
TCGGCA	1																																																																																																																																																1
TCGTCA	2	1																																																																																																																																															3
TCTCCT		2																																																																																																																																															2
TCTCGC	2																																																																																																																																																2
TCTGAC	1																																																																																																																																																1
TCTGAG	1																																																																																																																																																1
TCTGCA	1																																																																																																																																																1
TCTGCT	1																																																																																																																																																1
TCTGTA		1																																																																																																																																															1
TCTGTC	1																																																																																																																																																1
TCTTCC	2		1																																																																																																																																														3
TCTTCG	1																																																																																																																																																1
TCTTGT	1																																																																																																																																																1
TCTTTC	1																																																																																																																																																1
TCTTTT	2	1	1																																																																																																																																														4
TGAAGC	1																																																																																																																																																1
TGAATG	1																																																																																																																																																1
TGACAT	1																																																																																																																																																1
TGACCC	1																																																																																																																																																1
TGACGA	1																																																																																																																																																1
TGAGAG	1																																																																																																																																																1
TGAGCC		1																																																																																																																																															1
TGCAAC	1																																																																																																																																																1
TGCATA	1																																																																																																																																																1
TGCCCT	1																																																																																																																																																1
TGCGGC	1																																																																																																																																																1
TGCGGT	1																																																																																																																																																1
TGCTGT	1																																																																																																																																																1
TGGAGC	1																																																																																																																																																1
TGGAGG	1																																																																																																																																																1
TGGCAT	1																																																																																																																																																1
TGGCTC	1																																																																																																																																																1
TGGCTG	1																																																																																																																																																1
TGGTAG	1																																																																																																																																																1
TGGTCG	1																																																																																																																																																1
TGGTCT	1																																																																																																																																																1
TGGTGT	1																																																																																																																																																1
TGGTTC	1																																																																																																																																																1
TGTCGC	1																																																																																																																																																1
TGTGAA	1																																																																																																																																																1
TGTTGG	2																																																																																																																																																2
TTAAAT	1																																																																																																																																																1
TTAATA	3																																																																																																																																																3
TTAGAT		1																																																																																																																																															1
TTATAA		1																																																																																																																																															1
TTATTC	1																																																																																																																																																1
TTATTT	6	1																																																																																																																																															7
TTCACG			1																																																																																																																																														1
TTCAGA	1																																																																																																																																																1
TTCATA	1																																																																																																																																																1
TTCATC	1																																																																																																																																																1
TTCCTC	1																																																																																																																																																1
TTCCTG	1																																																																																																																																																1
TTCGTT			1																																																																																																																																														1
TTCTTT	4	1	1																																																																																																																																														6
TTGACG	1																																																																																																																																																1
TTGAGG	1																																																																																																																																																1
TTGATC	1																																																																																																																																																1
TTGATT	1																																																																																																																																																1
TTGGAG	1																																																																																																																																																1
TTGGTG	1																																																																																																																																																1
TTGTGA	1																																																																																																																																																1
TTGTGT		1																																																																																																																																															1
TTTAAA	1																																																																																																																																																1
TTTAAT	2																																																																																																																																																2
TTTACT	1																																																																																																																																																1
TTTAGA	1																																																																																																																																																1
TTTATT	6	4	1																																																																																																																																														11
TTTCAT	2																																																																																																																																																2
TTTCTA	1																																																																																																																																																1
TTTCTC	1																																																																																																																																																1
TTTCTT	3																																																																																																																																																3
TTTGAA	1																																																																																																																																																1
TTTGAT	1	1																																																																																																																																															2
TTTGCC	1																																																																																																																																																1
TTTGCT		1																																																																																																																																															1
TTTGGG	1																																																																																																																																																1
TTTTAT	5	4																																																																																																																																															9
TTTTCA		1																																																																																																																																															1
TTTTCC	1	1																																																																																																																																															2
TTTTCT	6	1																																																																																																																																															7
TTTTGT	1																																																																																																																																																1
TTTTTA	6		1																																																																																																																																														7
TTTTTC	15	4	1																																																																																																																																														20

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	39	28	29	22	15	18	12	19	19	15	11	7	6	6	8	5	2	5	5	4	5	2	3	2	2	1	6	6	2	1	1	4	3	4	1		5	2	1	2	4	2		1		1	2			1	1		1		1		1										1	1					1			1													1				2						1												1																1	353
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	1	3	4		2	1					2			1		1	1												1																1																																																																																		20
AC/GT	-	-	-	40	11	11	10	8	3	4	2	3	1	4	3	1	1	1	1		1	1	1				1			1																																																																																																																			109
AG/CT	-	-	-	85	41	25	25	17	3	6	5	2	4	1	3	1	2	1		1	2	1		1																																																																																																																									226
AT/AT	-	-	-	194	69	36	21	21	24	5	4	2	5	1	3																																																																																																																																		385
CG/CG	-	-	-	4																																																																																																																																													4
AAC/GTT	-	-	27	11	5	2	2						1											1																																																																																																																									49
AAG/CTT	-	-	48	15	8	9	4	2	6		2		1					1		1		1	1														1																																																																																																												100
AAT/ATT	-	-	54	27	16	5	4	3	1	3	1	2	1																																																																																																																																				117
ACC/GGT	-	-	18	12	4	1																																																																																																																																											35
ACG/CGT	-	-	14	2	1					1																																																																																																																																							18
ACT/AGT	-	-	13	2	4		2	4	2	1		2			2	2	2	1	1					1																																																																																																																									39
AGC/CTG	-	-	32	9	6	2	3	1	1																																																																																																																																								54
AGG/CCT	-	-	16	7	3		2	1	1	1	1	1																																																																																																																																					33
ATC/ATG	-	-	32	10	4	2	1			1	1		1		1						1																																																																																																																												54
CCG/CGG	-	-	14	5	1	2			1																																																																																																																																								23
AAAC/GTTT	-	3	4																																																																																																																																														7
AAAG/CTTT	-	59	24	13	2	1		1	2																																																																																																																																								102
AAAT/ATTT	-	58	16	2																																																																																																																																													76
AACC/GGTT	-	4																																																																																																																																															4
AACT/AGTT	-	2	1																																																																																																																																														3
AAGC/CTTG	-	3																																																																																																																																															3
AAGG/CCTT	-	5	1																																																																																																																																														6
AATC/ATTG	-	19	7	7	1			1																																																																																																																																									35
AATG/ATTC	-	8	5	2	1																																																																																																																																												16
AATT/AATT	-	11	1																																																																																																																																														12
ACAG/CTGT	-	4	1																																																																																																																																														5
ACAT/ATGT	-	39	8	9	3		1						1																																																																																																																																				61
ACCG/CGGT	-	2																																																																																																																																															2
ACCT/AGGT	-	4			1																																																																																																																																												5
ACGG/CCGT	-	1																																																																																																																																															1
ACTC/AGTG	-	8	1		2																																																																																																																																												11
ACTG/AGTC	-	2																																																																																																																																															2
AGAT/ATCT	-	8	3	1																																																																																																																																													12
AGCG/CGCT	-	1																																																																																																																																															1
AGGC/CCTG	-	3																																																																																																																																															3
AGGG/CCCT	-	2	2																																																																																																																																														4
ATCC/ATGG	-	5	1	1																																																																																																																																													7
AAAAC/GTTTT	10	1		1																																																																																																																																													12
AAAAG/CTTTT	191	51	16	4	1																																																																																																																																												263
AAAAT/ATTTT	142	30	7	3																																																																																																																																													182
AAACC/GGTTT	7																																																																																																																																																7
AAACG/CGTTT	1	1	1																																																																																																																																														3
AAACT/AGTTT	5	1																																																																																																																																															6
AAAGC/CTTTG	6	1																																																																																																																																															7
AAAGG/CCTTT	13	3	1																																																																																																																																														17
AAAGT/ACTTT	1																																																																																																																																																1
AAATC/ATTTG	7																																																																																																																																																7
AAATG/ATTTC	14																																																																																																																																																14
AAATT/AATTT	30	1																																																																																																																																															31
AACAC/GTGTT		1																																																																																																																																															1
AACAG/CTGTT	1																																																																																																																																																1
AACAT/ATGTT	2																																																																																																																																																2
AACCC/GGGTT	7	1																																																																																																																																															8
AACCG/CGGTT	2																																																																																																																																																2
AACCT/AGGTT	9	1																																																																																																																																															10
AACGT/ACGTT	1																																																																																																																																																1
AACTG/AGTTC		1																																																																																																																																															1
AAGAC/CTTGT	3		1																																																																																																																																														4
AAGAG/CTCTT	17	2																																																																																																																																															19
AAGAT/ATCTT	5																																																																																																																																																5
AAGCC/CTTGG	1																																																																																																																																																1
AAGCG/CGCTT	1																																																																																																																																																1
AAGCT/AGCTT	1																																																																																																																																																1
AAGGC/CCTTG	2																																																																																																																																																2
AAGGG/CCCTT	9	1																																																																																																																																															10
AAGGT/ACCTT	1																																																																																																																																																1
AAGTC/ACTTG	1																																																																																																																																																1
AATAC/ATTGT	3																																																																																																																																																3
AATAG/ATTCT	6	1																																																																																																																																															7
AATAT/ATATT	34																																																																																																																																																34
AATCC/ATTGG	4	1																																																																																																																																															5
AATCT/AGATT	8	1																																																																																																																																															9
AATGC/ATTGC	4	2																																																																																																																																															6
AATGG/ATTCC	5																																																																																																																																																5
AATGT/ACATT	1																																																																																																																																																1
AATTC/AATTG	9																																																																																																																																																9
ACACC/GGTGT	2	1																																																																																																																																															3
ACACG/CGTGT	2		1																																																																																																																																														3
ACACT/AGTGT	2																																																																																																																																																2
ACAGC/CTGTG	1																																																																																																																																																1
ACAGG/CCTGT	4	1																																																																																																																																															5
ACAGT/ACTGT	9	3																																																																																																																																															12
ACATC/ATGTG	1																																																																																																																																																1
ACATG/ATGTC	2	1																																																																																																																																															3
ACCAG/CTGGT	4																																																																																																																																																4
ACCAT/ATGGT	5	1																																																																																																																																															6
ACCCC/GGGGT	1																																																																																																																																																1
ACCCT/AGGGT	3																																																																																																																																																3
ACCGT/ACGGT	3																																																																																																																																																3
ACCTC/AGGTG	4																																																																																																																																																4
ACCTG/AGGTC	2																																																																																																																																																2
ACGAG/CGTCT	1																																																																																																																																																1
ACGAT/ATCGT	1																																																																																																																																																1
ACGCC/CGTGG	1																																																																																																																																																1
ACGCG/CGCGT	1																																																																																																																																																1
ACGGC/CCGTG	1																																																																																																																																																1
ACGGG/CCCGT	1																																																																																																																																																1
ACTAG/AGTCT	4	1																																																																																																																																															5
ACTAT/AGTAT	7																																																																																																																																																7
ACTCC/AGTGG	1																																																																																																																																																1
ACTCG/AGTCG	2	1																																																																																																																																															3
ACTCT/AGAGT	1																																																																																																																																																1
ACTGC/AGTGC	3																																																																																																																																																3
ACTGG/AGTCC	2																																																																																																																																																2
AGAGG/CCTCT	6																																																																																																																																																6
AGATC/ATCTG	2																																																																																																																																																2
AGATG/ATCTC	7	1																																																																																																																																															8
AGCAT/ATGCT	2																																																																																																																																																2
AGCCC/CTGGG	2																																																																																																																																																2
AGCCG/CGGCT	1																																																																																																																																																1
AGCGG/CCGCT	1																																																																																																																																																1
AGCTC/AGCTG	4																																																																																																																																																4
AGGAT/ATCCT	4																																																																																																																																																4
AGGCG/CCTCG	1																																																																																																																																																1
AGGGG/CCCCT	11																																																																																																																																																11
ATATC/ATATG	7	1																																																																																																																																															8
ATCCC/ATGGG	5																																																																																																																																																5
ATCGC/ATGCG	2																																																																																																																																																2
ATGCC/ATGGC	2																																																																																																																																																2
CCCCG/CGGGG	1																																																																																																																																																1
CCGCG/CGCGG	1																																																																																																																																																1
AAAAAC/GTTTTT	5																																																																																																																																																5
AAAAAG/CTTTTT	71	10	6			1																																																																																																																																											88
AAAAAT/ATTTTT	68	16	3	2				1																																																																																																																																									90
AAAACG/CGTTTT			1																																																																																																																																														1
AAAAGC/CTTTTG	4	2																																																																																																																																															6
AAAAGG/CCTTTT	5	1	1																																																																																																																																														7
AAAAGT/ACTTTT	2																																																																																																																																																2
AAAATC/ATTTTG	3	1																																																																																																																																															4
AAAATG/ATTTTC	5	1																																																																																																																																															6
AAAATT/AATTTT	14																																																																																																																																																14
AAACAC/GTGTTT	3	1																																																																																																																																															4
AAACAG/CTGTTT		1																																																																																																																																															1
AAACCC/GGGTTT	1																																																																																																																																																1
AAACGG/CCGTTT	1																																																																																																																																																1
AAACTG/AGTTTC	1																																																																																																																																																1
AAAGAC/CTTTGT	1																																																																																																																																																1
AAAGAG/CTCTTT	8	1																																																																																																																																															9
AAAGAT/ATCTTT		1																																																																																																																																															1
AAAGCC/CTTTGG	3																																																																																																																																																3
AAAGGC/CCTTTG	2																																																																																																																																																2
AAAGGG/CCCTTT	1																																																																																																																																																1
AAAGTG/ACTTTC	1																																																																																																																																																1
AAATAG/ATTTCT	3																																																																																																																																																3
AAATAT/ATATTT	1																																																																																																																																																1
AAATCC/ATTTGG	1																																																																																																																																																1
AAATCT/AGATTT	3	1			1																																																																																																																																												5
AAATGG/ATTTCC	1																																																																																																																																																1
AAATGT/ACATTT			1																																																																																																																																														1
AAATTC/AATTTG	1																																																																																																																																																1
AAATTT/AAATTT	2	2																																																																																																																																															4
AACAAG/CTTGTT	4	2																																																																																																																																															6
AACAAT/ATTGTT		1																																																																																																																																															1
AACACC/GGTGTT	7																																																																																																																																																7
AACACG/CGTGTT	1																																																																																																																																																1
AACACT/AGTGTT	1																																																																																																																																																1
AACAGC/CTGTTG	5	1	1		1																																																																																																																																												8
AACAGG/CCTGTT	2																																																																																																																																																2
AACAGT/ACTGTT	1																																																																																																																																																1
AACATC/ATGTTG	2			1																																																																																																																																													3
AACCAC/GGTTGT	2	1																																																																																																																																															3
AACCAG/CTGGTT	2																																																																																																																																																2
AACCCC/GGGGTT	3																																																																																																																																																3
AACCCG/CGGGTT	2																																																																																																																																																2
AACCGC/CGGTTG	1																																																																																																																																																1
AACCTC/AGGTTG	1																																																																																																																																																1
AACCTG/AGGTTC	2																																																																																																																																																2
AACGAC/CGTTGT	2																																																																																																																																																2
AACGCC/CGTTGG	2																																																																																																																																																2
AACGTC/ACGTTG	1																																																																																																																																																1
AACGTG/ACGTTC			1																																																																																																																																														1
AACTAT/AGTTAT	1																																																																																																																																																1
AACTCC/AGTTGG	2																																																																																																																																																2
AACTGC/AGTTGC	1																																																																																																																																																1
AAGAAT/ATTCTT	1																																																																																																																																																1
AAGACC/CTTGGT	1																																																																																																																																																1
AAGACG/CGTCTT	1																																																																																																																																																1
AAGACT/AGTCTT	1																																																																																																																																																1
AAGAGG/CCTCTT	8	2	1																																																																																																																																														11
AAGATC/ATCTTG	1																																																																																																																																																1
AAGATG/ATCTTC	2																																																																																																																																																2
AAGCAC/CTTGTG	2																																																																																																																																																2
AAGCAG/CTGCTT	1	1																																																																																																																																															2
AAGCCG/CGGCTT	2																																																																																																																																																2
AAGCTG/AGCTTC	2																																																																																																																																																2
AAGGAC/CCTTGT	1																																																																																																																																																1
AAGGAG/CCTTCT	4	2																																																																																																																																															6
AAGGGC/CCCTTG	1																																																																																																																																																1
AAGGGG/CCCCTT	2																																																																																																																																																2
AAGTAT/ACTTAT	1																																																																																																																																																1
AAGTGG/ACTTCC	1																																																																																																																																																1
AATAGG/ATTCCT	2																																																																																																																																																2
AATAGT/ACTATT	1																																																																																																																																																1
AATATC/ATATTG		1																																																																																																																																															1
AATATG/ATATTC	1																																																																																																																																																1
AATATT/AATATT	7	1																																																																																																																																															8
AATCAC/ATTGTG	2																																																																																																																																																2
AATCAG/ATTCTG	1	1																																																																																																																																															2
AATCAT/ATGATT	2																																																																																																																																																2
AATCCC/ATTGGG		2																																																																																																																																															2
AATCCG/ATTCGG	2																																																																																																																																																2
AATCGC/ATTGCG	1																																																																																																																																																1
AATCTG/AGATTC	1																																																																																																																																																1
AATGAG/ATTCTC	2	1																																																																																																																																															3
AATGCC/ATTGGC	3																																																																																																																																																3
AATGGT/ACCATT	1																																																																																																																																																1
AATGTC/ACATTG	1																																																																																																																																																1
AATGTG/ACATTC	3																																																																																																																																																3
AATTAG/AATTCT	1																																																																																																																																																1
AATTAT/AATTAT	3	1																																																																																																																																															4
AATTCC/AATTGG	2																																																																																																																																																2
ACACAT/ATGTGT	1	1																																																																																																																																															2
ACACCC/GGGTGT	1																																																																																																																																																1
ACACCG/CGGTGT	1																																																																																																																																																1
ACACGC/CGTGTG	1																																																																																																																																																1
ACACGG/CCGTGT	1																																																																																																																																																1
ACAGAG/CTCTGT	1																																																																																																																																																1
ACAGAT/ATCTGT		1																																																																																																																																															1
ACAGCC/CTGTGG	1																																																																																																																																																1
ACAGCG/CGCTGT	1																																																																																																																																																1
ACAGGC/CCTGTG		1																																																																																																																																															1
ACAGTC/ACTGTG	1																																																																																																																																																1
ACATGC/ATGTGC	1																																																																																																																																																1
ACATGT/ACATGT	1																																																																																																																																																1
ACCACG/CGTGGT	1																																																																																																																																																1
ACCACT/AGTGGT	1																																																																																																																																																1
ACCAGC/CTGGTG	1																																																																																																																																																1
ACCAGT/ACTGGT	1																																																																																																																																																1
ACCATC/ATGGTG	2																																																																																																																																																2
ACCATG/ATGGTC	3																																																																																																																																																3
ACCCAG/CTGGGT	1																																																																																																																																																1
ACCCAT/ATGGGT		1																																																																																																																																															1
ACCCCC/GGGGGT	1																																																																																																																																																1
ACCCCT/AGGGGT	1																																																																																																																																																1
ACCCTC/AGGGTG	2																																																																																																																																																2
ACCCTG/AGGGTC	2																																																																																																																																																2
ACCGAG/CGGTCT	1																																																																																																																																																1
ACCGCC/CGGTGG	3																																																																																																																																																3
ACCGTG/ACGGTC	2																																																																																																																																																2
ACCTCC/AGGTGG	1		1																																																																																																																																														2
ACCTGC/AGGTGC	1																																																																																																																																																1
ACCTGG/AGGTCC	1																																																																																																																																																1
ACGACT/AGTCGT	1																																																																																																																																																1
ACGAGC/CGTGCT	1																																																																																																																																																1
ACGAGG/CCTCGT	3																																																																																																																																																3
ACGATC/ATCGTG	3	1																																																																																																																																															4
ACGATG/ATCGTC	7	1																																																																																																																																															8
ACGCAG/CGTCTG	1																																																																																																																																																1
ACGCCG/CGGCGT	2																																																																																																																																																2
ACGCGG/CCGCGT	1																																																																																																																																																1
ACGCTC/AGCGTG	1																																																																																																																																																1
ACGGCC/CCGTGG	3																																																																																																																																																3
ACGTAG/ACGTCT	1																																																																																																																																																1
ACTAGC/AGTGCT	1																																																																																																																																																1
ACTATC/AGTGAT	1																																																																																																																																																1
ACTATG/AGTCAT	1																																																																																																																																																1
ACTCAG/AGTCTG	1	1																																																																																																																																															2
ACTCAT/AGTATG	2																																																																																																																																																2
ACTCCG/AGTCGG	1																																																																																																																																																1
ACTCTC/AGAGTG	2	1																																																																																																																																															3
ACTCTG/AGAGTC	2																																																																																																																																																2
ACTGCC/AGTGGC	3																																																																																																																																																3
ACTGCG/AGTCGC	1																																																																																																																																																1
ACTGGC/AGTGCC		1																																																																																																																																															1
AGAGCC/CTCTGG	6			1																																																																																																																																													7
AGAGCG/CGCTCT	2																																																																																																																																																2
AGAGCT/AGCTCT	1																																																																																																																																																1
AGAGGG/CCCTCT	3																																																																																																																																																3
AGATAT/ATATCT	2	1																																																																																																																																															3
AGATCG/ATCTCG	2																																																																																																																																																2
AGATGC/ATCTGC	1																																																																																																																																																1
AGATGG/ATCTCC	2																																																																																																																																																2
AGCAGG/CCTGCT	1																																																																																																																																																1
AGCATC/ATGCTG	2																																																																																																																																																2
AGCATG/ATGCTC	1	1																																																																																																																																															2
AGCCCC/CTGGGG	1																																																																																																																																																1
AGCCCG/CGGGCT		1																																																																																																																																															1
AGCCGC/CGGCTG	6	1																																																																																																																																															7
AGCCGG/CCGGCT	2	1																																																																																																																																															3
AGCCTG/AGGCTC	1	1	1																																																																																																																																														3
AGCGAT/ATCGCT	1																																																																																																																																																1
AGCGCC/CGCTGG	2																																																																																																																																																2
AGCGCG/CGCGCT	1																																																																																																																																																1
AGCGGC/CCGCTG	2	2																																																																																																																																															4
AGCTCC/AGCTGG	4	1																																																																																																																																															5
AGCTGC/AGCTGC	1																																																																																																																																																1
AGGATG/ATCCTC	8	1																																																																																																																																															9
AGGCCC/CCTGGG	1																																																																																																																																																1
AGGCCG/CCTCGG	1																																																																																																																																																1
AGGCGC/CCTGCG	1																																																																																																																																																1
AGGCGG/CCGCCT	3																																																																																																																																																3
AGGGAT/ATCCCT	1																																																																																																																																																1
AGGGCG/CCCTCG	2																																																																																																																																																2
AGGGGC/CCCCTG	2																																																																																																																																																2
AGGGGG/CCCCCT	3																																																																																																																																																3
ATATGC/ATATGC	2																																																																																																																																																2
ATCCCC/ATGGGG	1																																																																																																																																																1
ATCCCG/ATCGGG	2																																																																																																																																																2
ATCGCC/ATGGCG	2																																																																																																																																																2
ATCGCG/ATCGCG	1																																																																																																																																																1
ATCGGC/ATGCCG	2																																																																																																																																																2
CCCCCG/CGGGGG	1																																																																																																																																																1
CCGGCG/CCGGCG	1																																																																																																																																																1
