Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-7/megassr/results/hub_GCA_013145865.1/fasta/hub_GCA_013145865.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              126
Total size of examined sequences (bp):           38069058
Total number of identified SSRs:                 3273
Number of SSR containing sequences:              97
Number of sequences containing more than 1 SSR:  90
Number of SSRs present in compound formation:    275


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	198
2	713
3	515
4	359
5	911
6	577

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	18	11	6	9	6	5	1	3	3	2	2	1	3		1	1	2			1	1						1	1			2												1						1													1																																																																							83
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	1			1	1	2	2					2	2			1					1									1																																																		1																																																				17
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2		1	2	1	1	1			1			1			1				1																																1																																																																																	13
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	16	11	6	5	9	8	6	2	2	2	1	3	2			1					1								1				1	1					1	1		1										1												1																	1																																																			1	85
AC	-	-	-	8	9	3	1	1		1		2	1	1																1																																																																																																																								28
AG	-	-	-	28	15	12	7	5	3		2			2															1																																																																																																																									75
AT	-	-	-	76	26	18	11	5	4	5	2			1																																																																																																																																								148
CA	-	-	-	13	2	3	4	4	2	2			1		1													1								1																																																																																																																		34
CT	-	-	-	18	8	5	3	3	3		3	2	2	1			1		1			1	1																																																																																																																															52
GA	-	-	-	20	5	3	4	3	3	4		2	1																	1																																																																																																																								46
GC	-	-	-	2																																																																																																																																																		2
GT	-	-	-	8	3	2	2	1	2	1	1																		1																																																																																																																									21
TA	-	-	-	102	40	16	14	7	5	4	1			1			1																																																																																																																																					191
TC	-	-	-	36	21	7	3	7	3	4	1	1	1						1						1																																																																																																																													86
TG	-	-	-	11	7	1	3		1	1	1				1	1									1				1			1																																																																																																																						30
AAC	-	-	1	1	1		1																																																																																																																																															4
AAG	-	-	12	5	2	1	3	1		1			1	1										1																																																																																																																														28
AAT	-	-	12	5	1	3	2			1					1																																																																																																																																							25
ACA	-	-	4	2	1																																																																																																																																																	7
ACC	-	-	1	1																																																																																																																																																		2
ACT	-	-	6		2	1																																																																																																																																																9
AGA	-	-	5	10	1	1				1		1														1																																																																																																																												20
AGC	-	-	1	3			1		1																																																																																																																																													6
AGG	-	-	1																																																																																																																																																			1
AGT	-	-	2	2					1								1																																																																																																																																					6
ATA	-	-	6		1				1																																																																																																																																													8
ATC	-	-	2	1	2		1																																																																																																																																															6
ATG	-	-	3			1																																																																																																																																																4
ATT	-	-	12	5	3	2	1			1														1																																																																																																																														25
CAA	-	-	9	3	2		1																																																																																																																																															15
CAC	-	-	5			1	1																																																																																																																																															7
CAG	-	-	6	2	1	1																																																																																																																																																10
CAT	-	-	5	4	1			1																																																																																																																																														11
CCA	-	-	4	2	1																																																																																																																																																	7
CCG	-	-	3	1																																																																																																																																																		4
CCT	-	-	1			1																																																																																																																																																2
CGA	-	-	1																																																																																																																																																			1
CGC	-	-	1																																																																																																																																																			1
CGG	-	-	1																																																																																																																																																			1
CGT	-	-	2																																																																																																																																																			2
CTA	-	-	3																																																																																																																																																			3
CTC	-	-	4		2	1									1																																																																																																																																							8
CTG	-	-	4	1																																																																																																																																																		5
CTT	-	-	16	4	1		2		2				2					1			1	1																																																																																																																																30
GAA	-	-	5	2		2	1	1											1																																																																																																																																			12
GAC	-	-	1	1																																																																																																																																																		2
GAG	-	-	2	2			2		1																																																																																																																																													7
GAT	-	-	2	2		1		1																																																																																																																																														6
GCA	-	-	4	3		1																																																																																																																																																8
GCC	-	-	4	1																																																																																																																																																		5
GCG	-	-	5																																																																																																																																																			5
GCT	-	-	3	2			1																																																																																																																																															6
GGA	-	-	4	1		1		1																																																																																																																																														7
GGC	-	-	4	4																																																																																																																																																		8
GGT	-	-	2	2		1																																																																																																																																																5
GTA	-	-	1	2									1																																																																																																																																									4
GTG	-	-	2																																																																																																																																																			2
GTT	-	-	2	3				1		1																																																																																																																																												7
TAA	-	-	5	3	1	1																																																																																																																																																10
TAC	-	-		2			1	1		1					1																																																																																																																																							6
TAG	-	-	1		1																																																																																																																																																	2
TAT	-	-	8	5	1	2			1																																																																																																																																													17
TCA	-	-	5	1	1																																																																																																																																																	7
TCC	-	-	1	3	1					1																																																																																																																																												6
TCG	-	-	2	1							1																																																																																																																																											4
TCT	-	-	8	2			1	3	1									1																																																																																																																																				16
TGA	-	-	5	2	2	1	1																																																																																																																																															11
TGC	-	-	9	4	1		1																																																																																																																																															15
TGG	-	-	5	2	1																																																																																																																																																	8
TGT	-	-	8	2	2	1																																																																																																																																																13
TTA	-	-	16	8	4		2						1																																																																																																																																									31
TTC	-	-	7	1	1	1	5	2		1						1							1		1																																																																																																																													21
TTG	-	-	3	1	1						1																																																																																																																																											6
AAAC	-	2																																																																																																																																																				2
AAAG	-	15	7	1	2	1		1		2		1																																																																																																																																										30
AAAT	-	19	4	1																																																																																																																																																		24
AAGA	-	7		1																																																																																																																																																		8
AATA	-	8			1																																																																																																																																																	9
AATC	-	4	2																																																																																																																																																			6
AATT	-	7	2			1																																																																																																																																																10
ACAA	-	1																																																																																																																																																				1
ACAT	-	2	1																																																																																																																																																			3
ACCA	-		1																																																																																																																																																			1
ACCG	-	1																																																																																																																																																				1
AGAA	-	10	1				1																																																																																																																																															12
AGAT	-	2																																																																																																																																																				2
AGCT	-	1																																																																																																																																																				1
AGGA	-	1																																																																																																																																																				1
AGGG	-	1																																																																																																																																																				1
AGTG	-	1																																																																																																																																																				1
ATAA	-	5	2	1																																																																																																																																																		8
ATAC	-	3	1	1																																																																																																																																																		5
ATAG	-	1		1																																																																																																																																																		2
ATCA	-	4																																																																																																																																																				4
ATGA	-	2																																																																																																																																																				2
ATGC	-			1																																																																																																																																																		1
ATGG	-	2																																																																																																																																																				2
ATGT	-	3	3	1																																																																																																																																																		7
ATTA	-	6																																																																																																																																																				6
ATTG	-	1																																																																																																																																																				1
ATTT	-	8																																																																																																																																																				8
CAAC	-	1																																																																																																																																																				1
CAAG	-	1																																																																																																																																																				1
CAAT	-	2																																																																																																																																																				2
CACT	-	1																																																																																																																																																				1
CATA	-	5	1																																																																																																																																																			6
CATT	-	1																																																																																																																																																				1
CCAA	-	1																																																																																																																																																				1
CCTA	-		1																																																																																																																																																			1
CTAC	-	1																																																																																																																																																				1
CTAT	-	2			1																																																																																																																																																	3
CTCA	-		1																																																																																																																																																			1
CTCG	-	1																																																																																																																																																				1
CTTC	-	2																																																																																																																																																				2
CTTT	-	6	4																																																																																																																																																			10
GAAA	-	3					1																																																																																																																																															4
GAAG	-	1																																																																																																																																																				1
GAAT	-	1	2																																																																																																																																																			3
GAGC	-	1																																																																																																																																																				1
GAGG	-			1																																																																																																																																																		1
GGAG	-	1																																																																																																																																																				1
GGAT	-	1																																																																																																																																																				1
GGTA	-	1																																																																																																																																																				1
GGTT	-	1																																																																																																																																																				1
GTAT	-	4	1		1																																																																																																																																																	6
GTCA	-	1																																																																																																																																																				1
GTCT	-	1																																																																																																																																																				1
GTGA	-	2		1																																																																																																																																																		3
GTTG	-	1																																																																																																																																																				1
TAAA	-	3	1																																																																																																																																																			4
TAAT	-	6	3																																																																																																																																																			9
TACA	-	11	2	1	1																																																																																																																																																	15
TAGG	-			1																																																																																																																																																		1
TATG	-	1																																																																																																																																																				1
TATT	-	6																																																																																																																																																				6
TCAA	-	1		2																																																																																																																																																		3
TCAT	-	1	2																																																																																																																																																			3
TCCA	-	1																																																																																																																																																				1
TCCC	-	1																																																																																																																																																				1
TCTA	-	2																																																																																																																																																				2
TCTG	-		1																																																																																																																																																			1
TCTT	-	5	1	1	1		1																																																																																																																																															9
TGAA	-	4																																																																																																																																																				4
TGAC	-	1																																																																																																																																																				1
TGAG	-	2																																																																																																																																																				2
TGAT	-	1		1																																																																																																																																																		2
TGGT	-	1																																																																																																																																																				1
TGTA	-	4	5	2																																																																																																																																																		11
TTAA	-		1																																																																																																																																																			1
TTAT	-	4	1			1																																																																																																																																																6
TTCA	-	4																																																																																																																																																				4
TTCT	-	5				1																																																																																																																																																6
TTGA	-	5	2		1																																																																																																																																																	8
TTGC	-	1																																																																																																																																																				1
TTGG	-	1																																																																																																																																																				1
TTGT	-	1																																																																																																																																																				1
TTTA	-	3	2	2				1																																																																																																																																														8
TTTC	-	14	3	6	2	3	1																																																																																																																																															29
AAAAC	3					1																																																																																																																																																4
AAAAG	45	14	6	2																																																																																																																																																		67
AAAAT	34	4	3	2		1		1																																																																																																																																														45
AAACA	2	1																																																																																																																																																				3
AAACC	2																																																																																																																																																					2
AAAGA	5	3	2	1																																																																																																																																																		11
AAAGC	2																																																																																																																																																					2
AAAGG	5	1																																																																																																																																																				6
AAAGT	1																																																																																																																																																					1
AAATA	11	3	1	2																																																																																																																																																		17
AAATC	1	1																																																																																																																																																				2
AAATG	1		1																																																																																																																																																			2
AAATT	3																																																																																																																																																					3
AACAA		1																																																																																																																																																				1
AACTA	4																																																																																																																																																					4
AACTG	1																																																																																																																																																					1
AAGAA	15	3																																																																																																																																																				18
AAGAG	2		1																																																																																																																																																			3
AAGGA	1																																																																																																																																																					1
AAGGG	1																																																																																																																																																					1
AATAA	6	2	1																																																																																																																																																			9
AATAC	1																																																																																																																																																					1
AATAT	8																																																																																																																																																					8
AATCA	1	1																																																																																																																																																				2
AATCC	3	1																																																																																																																																																				4
AATCG	1																																																																																																																																																					1
AATCT	1																																																																																																																																																					1
AATGC	1	1																																																																																																																																																				2
AATTA	6																																																																																																																																																					6
AATTC	1																																																																																																																																																					1
AATTT	4	1																																																																																																																																																				5
ACAAA	1																																																																																																																																																					1
ACAAC	1																																																																																																																																																					1
ACAAG	1																																																																																																																																																					1
ACACC	1																																																																																																																																																					1
ACACG		1																																																																																																																																																				1
ACAGG	2																																																																																																																																																					2
ACAGT	1																																																																																																																																																					1
ACATC	1																																																																																																																																																					1
ACATG	2																																																																																																																																																					2
ACCAA	1																																																																																																																																																					1
ACCCC	2																																																																																																																																																					2
ACCCT		1																																																																																																																																																				1
ACCGA	1																																																																																																																																																					1
ACCTA			1																																																																																																																																																			1
ACGAG	1																																																																																																																																																					1
ACGCA	1																																																																																																																																																					1
ACTAG	1																																																																																																																																																					1
ACTAT	1																																																																																																																																																					1
ACTTG	1																																																																																																																																																					1
AGAAA	16	1	1																																																																																																																																																			18
AGAAG	3																																																																																																																																																					3
AGACA	1																																																																																																																																																					1
AGACT		1																																																																																																																																																				1
AGAGA	1																																																																																																																																																					1
AGATG	2																																																																																																																																																					2
AGCAA	3	1																																																																																																																																																				4
AGCCC	1																																																																																																																																																					1
AGCTG	1																																																																																																																																																					1
AGGAG	1																																																																																																																																																					1
AGGAT	1																																																																																																																																																					1
AGGCG	1																																																																																																																																																					1
AGGGA	2																																																																																																																																																					2
AGGTA	1																																																																																																																																																					1
AGGTG	1																																																																																																																																																					1
AGGTT	1																																																																																																																																																					1
AGTAC	2																																																																																																																																																					2
AGTAG	1																																																																																																																																																					1
AGTCA	1																																																																																																																																																					1
ATAAA	22	4																																																																																																																																																				26
ATAAT	1																																																																																																																																																					1
ATACC	1																																																																																																																																																					1
ATACT	1																																																																																																																																																					1
ATATA	1																																																																																																																																																					1
ATATT	8	1																																																																																																																																																				9
ATCAT	1																																																																																																																																																					1
ATCCC	1																																																																																																																																																					1
ATCCT	1																																																																																																																																																					1
ATCTA		1																																																																																																																																																				1
ATCTC		1																																																																																																																																																				1
ATCTG		1																																																																																																																																																				1
ATGAG	1																																																																																																																																																					1
ATGAT	2																																																																																																																																																					2
ATGCA	3																																																																																																																																																					3
ATGGG		1																																																																																																																																																				1
ATTAA	7																																																																																																																																																					7
ATTCA	2																																																																																																																																																					2
ATTCG	1																																																																																																																																																					1
ATTGA		1																																																																																																																																																				1
ATTGT	1																																																																																																																																																					1
ATTTA	2																																																																																																																																																					2
ATTTC	2																																																																																																																																																					2
ATTTG	1	2																																																																																																																																																				3
ATTTT	15	2																																																																																																																																																				17
CAAAA	2	1																																																																																																																																																				3
CAAAG	2																																																																																																																																																					2
CAAAT	2																																																																																																																																																					2
CAAGC	1																																																																																																																																																					1
CAATA	2																																																																																																																																																					2
CAATG	1																																																																																																																																																					1
CAATT	1																																																																																																																																																					1
CACCC	1																																																																																																																																																					1
CACTT	1																																																																																																																																																					1
CAGCC	1																																																																																																																																																					1
CAGGA	1																																																																																																																																																					1
CATAT	1																																																																																																																																																					1
CATCT		1																																																																																																																																																				1
CATGA	1																																																																																																																																																					1
CATGT	2																																																																																																																																																					2
CATTT	1																																																																																																																																																					1
CCAAC	2																																																																																																																																																					2
CCAAT		1																																																																																																																																																				1
CCACG	1																																																																																																																																																					1
CCATA	1																																																																																																																																																					1
CCATT		1																																																																																																																																																				1
CCCAA	2																																																																																																																																																					2
CCCAT	1																																																																																																																																																					1
CCCCT	2																																																																																																																																																					2
CCCGA	1																																																																																																																																																					1
CCCTC	1																																																																																																																																																					1
CCCTT	1																																																																																																																																																					1
CCGCG	1																																																																																																																																																					1
CCGGT	1																																																																																																																																																					1
CCGTG	1																																																																																																																																																					1
CCTAA		1																																																																																																																																																				1
CCTCC	1																																																																																																																																																					1
CCTCT	1																																																																																																																																																					1
CCTTC	1																																																																																																																																																					1
CCTTT	5	1	1																																																																																																																																																			7
CGTCT	1	1																																																																																																																																																				2
CTAAA	1																																																																																																																																																					1
CTACA	1																																																																																																																																																					1
CTAGT	1																																																																																																																																																					1
CTATC	1																																																																																																																																																					1
CTCAA	1																																																																																																																																																					1
CTCAG	2																																																																																																																																																					2
CTCAT	1																																																																																																																																																					1
CTCCA	1																																																																																																																																																					1
CTCCC	1																																																																																																																																																					1
CTCCT	1																																																																																																																																																					1
CTCTC	1																																																																																																																																																					1
CTCTT	2																																																																																																																																																					2
CTGAA	1																																																																																																																																																					1
CTGTA	1																																																																																																																																																					1
CTGTC	1																																																																																																																																																					1
CTTCC	1																																																																																																																																																					1
CTTCT	2																																																																																																																																																					2
CTTTC	3																																																																																																																																																					3
CTTTT	22	3	2					1																																																																																																																																														28
GAAAA	11	1																																																																																																																																																				12
GAAAC			1																																																																																																																																																			1
GAAAT	2		1																																																																																																																																																			3
GAACC	1																																																																																																																																																					1
GAAGA	1																																																																																																																																																					1
GAAGG	1																																																																																																																																																					1
GAATA	1																																																																																																																																																					1
GAATT	2																																																																																																																																																					2
GACCT	2																																																																																																																																																					2
GACTA	1																																																																																																																																																					1
GACTT	1																																																																																																																																																					1
GAGAA	1																																																																																																																																																					1
GAGAG	1																																																																																																																																																					1
GAGAT	1	1																																																																																																																																																				2
GAGCC	1																																																																																																																																																					1
GAGGA	1																																																																																																																																																					1
GAGGC	1																																																																																																																																																					1
GAGGG	4																																																																																																																																																					4
GATAA	1																																																																																																																																																					1
GATAG	1																																																																																																																																																					1
GATAT	1																																																																																																																																																					1
GATGA	1																																																																																																																																																					1
GATGG	1																																																																																																																																																					1
GATGT	1																																																																																																																																																					1
GCAAA	1																																																																																																																																																					1
GCGAA	1																																																																																																																																																					1
GCGTG	1																																																																																																																																																					1
GCTTT	1																																																																																																																																																					1
GGAAA	1																																																																																																																																																					1
GGAAG		1																																																																																																																																																				1
GGAAT	1																																																																																																																																																					1
GGACC	1																																																																																																																																																					1
GGAGA		2																																																																																																																																																				2
GGAGC	1																																																																																																																																																					1
GGATA		1																																																																																																																																																				1
GGATG	1																																																																																																																																																					1
GGGAC	1																																																																																																																																																					1
GGGAG	1																																																																																																																																																					1
GGGAT	1																																																																																																																																																					1
GGGTG	1																																																																																																																																																					1
GGGTT	1																																																																																																																																																					1
GGTAG	1																																																																																																																																																					1
GGTAT	1																																																																																																																																																					1
GGTCT	1																																																																																																																																																					1
GGTGA	1																																																																																																																																																					1
GGTGT	1																																																																																																																																																					1
GGTTC	1																																																																																																																																																					1
GGTTT	1																																																																																																																																																					1
GTACA	2																																																																																																																																																					2
GTACG	1																																																																																																																																																					1
GTATG	2																																																																																																																																																					2
GTCGA		1																																																																																																																																																				1
GTGTA	1																																																																																																																																																					1
GTGTT	1																																																																																																																																																					1
GTTGG	1																																																																																																																																																					1
GTTGT	1																																																																																																																																																					1
GTTTG	1																																																																																																																																																					1
TAAAA	11	3	1																																																																																																																																																			15
TAAAT	4																																																																																																																																																					4
TAATA	1																																																																																																																																																					1
TAATC	1																																																																																																																																																					1
TAATT	8																																																																																																																																																					8
TACAA	1																																																																																																																																																					1
TACAG	1																																																																																																																																																					1
TACAT		1																																																																																																																																																				1
TACCG	1																																																																																																																																																					1
TACGG	2																																																																																																																																																					2
TACTG	1																																																																																																																																																					1
TAGGT	1																																																																																																																																																					1
TAGTA	1																																																																																																																																																					1
TAGTT	1																																																																																																																																																					1
TATAA	1																																																																																																																																																					1
TATAC		1																																																																																																																																																				1
TATAG	2																																																																																																																																																					2
TATAT	5																																																																																																																																																					5
TATCA	1																																																																																																																																																					1
TATTA	1																																																																																																																																																					1
TATTT	14	3	1																																																																																																																																																			18
TCAAA	2																																																																																																																																																					2
TCAAT	1																																																																																																																																																					1
TCAGA		1																																																																																																																																																				1
TCAGG	1																																																																																																																																																					1
TCATA	1																																																																																																																																																					1
TCCTC	1																																																																																																																																																					1
TCGGT	1																																																																																																																																																					1
TCTAC	1																																																																																																																																																					1
TCTAT		1																																																																																																																																																				1
TCTCC	1	1																																																																																																																																																				2
TCTCT	2	1																																																																																																																																																				3
TCTGA	1																																																																																																																																																					1
TCTTC	2																																																																																																																																																					2
TCTTT	15	4	1		2																																																																																																																																																	22
TGAAA	2																																																																																																																																																					2
TGACA	1	1																																																																																																																																																				2
TGAGA	1																																																																																																																																																					1
TGAGC	1																																																																																																																																																					1
TGAGG	1																																																																																																																																																					1
TGATA	3																																																																																																																																																					3
TGATC		1																																																																																																																																																				1
TGATT	1																																																																																																																																																					1
TGCAT		1	1																																																																																																																																																			2
TGCTA	1																																																																																																																																																					1
TGCTG	1																																																																																																																																																					1
TGGAT				1																																																																																																																																																		1
TGGCT	1																																																																																																																																																					1
TGGGA	1																																																																																																																																																					1
TGGGT	1																																																																																																																																																					1
TGGTA	1																																																																																																																																																					1
TGGTT	1																																																																																																																																																					1
TGTAC	2																																																																																																																																																					2
TGTCG	2																																																																																																																																																					2
TGTCT	1																																																																																																																																																					1
TGTGG	1																																																																																																																																																					1
TGTGT	1																																																																																																																																																					1
TGTTT	1	1																																																																																																																																																				2
TTAAA	4																																																																																																																																																					4
TTAAT	9																																																																																																																																																					9
TTACT	1																																																																																																																																																					1
TTATA	3																																																																																																																																																					3
TTATC	1																																																																																																																																																					1
TTATT	20																																																																																																																																																					20
TTCAC	1																																																																																																																																																					1
TTCAT	1																																																																																																																																																					1
TTCCC	1																																																																																																																																																					1
TTCCT	2																																																																																																																																																					2
TTCTC	1																																																																																																																																																					1
TTCTT	6	3	1																																																																																																																																																			10
TTGCC	1																																																																																																																																																					1
TTTAA	2																																																																																																																																																					2
TTTAT	13	9																																																																																																																																																				22
TTTCC	4	2																																																																																																																																																				6
TTTCG	1																																																																																																																																																					1
TTTCT	12	4			1																																																																																																																																																	17
TTTGG	1																																																																																																																																																					1
TTTGT	3																																																																																																																																																					3
TTTTA	19	5																																																																																																																																																				24
TTTTC	48	11	4	1																																																																																																																																																		64
TTTTG	5	1		1																																																																																																																																																		7
AAAAAC	2																																																																																																																																																					2
AAAAAG	11	3																																																																																																																																																				14
AAAAAT	14	1																																																																																																																																																				15
AAAACA	1																																																																																																																																																					1
AAAAGA	8		2																																																																																																																																																			10
AAAAGC	2																																																																																																																																																					2
AAAAGG	1	1																																																																																																																																																				2
AAAATA	6																																																																																																																																																					6
AAAATT	1																																																																																																																																																					1
AAACCA	3																																																																																																																																																					3
AAAGAA	1							1																																																																																																																																														2
AAAGAC	1																																																																																																																																																					1
AAAGAG	2																																																																																																																																																					2
AAAGCC	1																																																																																																																																																					1
AAAGGA	2																																																																																																																																																					2
AAAGTG	1																																																																																																																																																					1
AAATAA	4																																																																																																																																																					4
AAATCT	1																																																																																																																																																					1
AAATGA	1																																																																																																																																																					1
AAATTA	4																																																																																																																																																					4
AACAAG			1																																																																																																																																																			1
AACACA	1																																																																																																																																																					1
AACACC		1																																																																																																																																																				1
AACCCA	1																																																																																																																																																					1
AACCCG			1																																																																																																																																																			1
AACGGA	1																																																																																																																																																					1
AAGAAA	6	1	1																																																																																																																																																			8
AAGAAC	2																																																																																																																																																					2
AAGAGG	1		1																																																																																																																																																			2
AAGCCG		1																																																																																																																																																				1
AAGGAA			1																																																																																																																																																			1
AATAAA	3		1																																																																																																																																																			4
AATATT	5																																																																																																																																																					5
AATGAA		1																																																																																																																																																				1
AATGCC	1																																																																																																																																																					1
AATGTA	1																																																																																																																																																					1
AATTAT	1																																																																																																																																																					1
AATTTA	1																																																																																																																																																					1
AATTTT	1																																																																																																																																																					1
ACAACC	1																																																																																																																																																					1
ACAAGA	1																																																																																																																																																					1
ACGACC	2																																																																																																																																																					2
ACGTCA	1																																																																																																																																																					1
ACTACC	1				1																																																																																																																																																	2
ACTTTG	1																																																																																																																																																					1
AGAAAA		1																																																																																																																																																				1
AGAAAG	1	1																																																																																																																																																				2
AGAAAT	2																																																																																																																																																					2
AGAGCT	1																																																																																																																																																					1
AGATAT	1																																																																																																																																																					1
AGCATC	1																																																																																																																																																					1
AGCCGC	1																																																																																																																																																					1
AGCGGG	1																																																																																																																																																					1
AGCTGC	1																																																																																																																																																					1
AGGAAA	1																																																																																																																																																					1
AGGAGA	1																																																																																																																																																					1
AGGAGC	1																																																																																																																																																					1
AGGCGA	1																																																																																																																																																					1
AGGCGG	1																																																																																																																																																					1
AGGGAG	1																																																																																																																																																					1
AGGGTC	1																																																																																																																																																					1
AGTACC	1																																																																																																																																																					1
AGTGGT				1	1																																																																																																																																																	2
AGTTGT	1																																																																																																																																																					1
ATAAAA	1																																																																																																																																																					1
ATAAAG	1																																																																																																																																																					1
ATAAGA	1																																																																																																																																																					1
ATAATC	1																																																																																																																																																					1
ATAATT	2																																																																																																																																																					2
ATAGTA	1																																																																																																																																																					1
ATATAA	2																																																																																																																																																					2
ATATAC	1																																																																																																																																																					1
ATATCA		1																																																																																																																																																				1
ATATTA	3																																																																																																																																																					3
ATATTG	1																																																																																																																																																					1
ATCATA	1																																																																																																																																																					1
ATCATG	1																																																																																																																																																					1
ATCCTC	2																																																																																																																																																					2
ATCGCC	1																																																																																																																																																					1
ATCGTG	1																																																																																																																																																					1
ATCTCC	1																																																																																																																																																					1
ATGACC	1																																																																																																																																																					1
ATGAGA	2																																																																																																																																																					2
ATGATT	1																																																																																																																																																					1
ATGCCA	1																																																																																																																																																					1
ATTAAT	2																																																																																																																																																					2
ATTCTC			1																																																																																																																																																			1
ATTTTA	1																																																																																																																																																					1
ATTTTT	2																																																																																																																																																					2
CAACAC	1																																																																																																																																																					1
CAACCC	1																																																																																																																																																					1
CAAGAA	1																																																																																																																																																					1
CAAGAC	1																																																																																																																																																					1
CACACC	1																																																																																																																																																					1
CACATT	1																																																																																																																																																					1
CACCAG	1																																																																																																																																																					1
CACCAT	1																																																																																																																																																					1
CACGGC	1																																																																																																																																																					1
CACTCT	1																																																																																																																																																					1
CAGAAA	1																																																																																																																																																					1
CAGCAA	2																																																																																																																																																					2
CAGCAT	1																																																																																																																																																					1
CAGCCC	1																																																																																																																																																					1
CAGCTT	1																																																																																																																																																					1
CAGTAA	1																																																																																																																																																					1
CAGTAG	1																																																																																																																																																					1
CATCAG	1																																																																																																																																																					1
CATCGT	1																																																																																																																																																					1
CATCTT		1																																																																																																																																																				1
CATGAA	1																																																																																																																																																					1
CCAAAA	1																																																																																																																																																					1
CCAACA	1																																																																																																																																																					1
CCAAGA	1																																																																																																																																																					1
CCAAGC	1																																																																																																																																																					1
CCACAA			1																																																																																																																																																			1
CCACCT	1																																																																																																																																																					1
CCACTG	1																																																																																																																																																					1
CCACTT	1																																																																																																																																																					1
CCAGCT	1																																																																																																																																																					1
CCATGT	1																																																																																																																																																					1
CCCAAA	1																																																																																																																																																					1
CCCCAC	1																																																																																																																																																					1
CCCCCT	1																																																																																																																																																					1
CCCGAC	1																																																																																																																																																					1
CCCTCC	1																																																																																																																																																					1
CCCTCT	1																																																																																																																																																					1
CCGAGA	1																																																																																																																																																					1
CCGATG	1																																																																																																																																																					1
CCGCGC	1																																																																																																																																																					1
CCGCTG	1																																																																																																																																																					1
CCGTGG	1																																																																																																																																																					1
CCTCCC	1																																																																																																																																																					1
CCTCCG	1																																																																																																																																																					1
CCTGCT	1																																																																																																																																																					1
CCTGGT		1																																																																																																																																																				1
CCTGTC	1																																																																																																																																																					1
CCTTGC	1																																																																																																																																																					1
CCTTTC	1																																																																																																																																																					1
CGAAGC	1																																																																																																																																																					1
CGACCT	1																																																																																																																																																					1
CGACTC	1																																																																																																																																																					1
CGATAG		1																																																																																																																																																				1
CGATCA	1																																																																																																																																																					1
CGCACA	1																																																																																																																																																					1
CGCAGC		1																																																																																																																																																				1
CGCCAG	1																																																																																																																																																					1
CGGAGC	1																																																																																																																																																					1
CGGCAG	1																																																																																																																																																					1
CGGCTC	1																																																																																																																																																					1
CGTCCT	1																																																																																																																																																					1
CTCATC	2																																																																																																																																																					2
CTCCCG		1																																																																																																																																																				1
CTCCGT	1																																																																																																																																																					1
CTCGGG		1																																																																																																																																																				1
CTCTCC	1																																																																																																																																																					1
CTCTTC	1																																																																																																																																																					1
CTGACG		1																																																																																																																																																				1
CTGCCG	1																																																																																																																																																					1
CTGCGA		1																																																																																																																																																				1
CTGCTC	1																																																																																																																																																					1
CTGGAG	1																																																																																																																																																					1
CTGGCT	1																																																																																																																																																					1
CTGGGG		1																																																																																																																																																				1
CTGTGG	1																																																																																																																																																					1
CTGTTG	1	1																																																																																																																																																				2
CTTCCT	1																																																																																																																																																					1
CTTCTA	1																																																																																																																																																					1
CTTCTC	1	1																																																																																																																																																				2
CTTTCT	1																																																																																																																																																					1
CTTTTA	1																																																																																																																																																					1
CTTTTC	1																																																																																																																																																					1
CTTTTT	2	4	2																																																																																																																																																			8
GAAAAA	7																																																																																																																																																					7
GAAAAT	1																																																																																																																																																					1
GAAAGG	1																																																																																																																																																					1
GAACAG	1																																																																																																																																																					1
GAAGAC		1																																																																																																																																																				1
GAAGAG	1																																																																																																																																																					1
GAATGG	1																																																																																																																																																					1
GAATTA	1																																																																																																																																																					1
GACAAC	1																																																																																																																																																					1
GACAGC	1																																																																																																																																																					1
GACATG	1																																																																																																																																																					1
GACGAA	2																																																																																																																																																					2
GACGAT	1																																																																																																																																																					1
GACGCA	1																																																																																																																																																					1
GACTGC	1																																																																																																																																																					1
GAGCCA	1																																																																																																																																																					1
GAGCCC	1																																																																																																																																																					1
GAGGAA	1																																																																																																																																																					1
GAGGAC	1																																																																																																																																																					1
GAGGAT	1																																																																																																																																																					1
GAGGGA	2	1																																																																																																																																																				3
GAGGTG	1																																																																																																																																																					1
GATCTA	1																																																																																																																																																					1
GATGAG	1																																																																																																																																																					1
GATGGT	1																																																																																																																																																					1
GATGTT	1																																																																																																																																																					1
GCAAAG	1																																																																																																																																																					1
GCAATG	1																																																																																																																																																					1
GCAGGG	1																																																																																																																																																					1
GCAGTA	1																																																																																																																																																					1
GCATCA	1																																																																																																																																																					1
GCCACG	1																																																																																																																																																					1
GCCGAT	1																																																																																																																																																					1
GCCGCT		1																																																																																																																																																				1
GCCTCG	1																																																																																																																																																					1
GCCTGA		1																																																																																																																																																				1
GCGATG	1																																																																																																																																																					1
GCGATT	1																																																																																																																																																					1
GCGCAG	1																																																																																																																																																					1
GCGCTC	2																																																																																																																																																					2
GCGGCA	1																																																																																																																																																					1
GCGGCT		1																																																																																																																																																				1
GCGTCA	1																																																																																																																																																					1
GCTAGA	1																																																																																																																																																					1
GCTCTC	1																																																																																																																																																					1
GCTGCA	1																																																																																																																																																					1
GCTGCG	1																																																																																																																																																					1
GCTGGA	1																																																																																																																																																					1
GCTGGT		1																																																																																																																																																				1
GCTGTT		1																																																																																																																																																				1
GCTTCC	1																																																																																																																																																					1
GCTTTA	1																																																																																																																																																					1
GGAAAA							1																																																																																																																																															1
GGACAG	1																																																																																																																																																					1
GGACCT		1																																																																																																																																																				1
GGACGC	1																																																																																																																																																					1
GGACTT	1																																																																																																																																																					1
GGAGAA	1																																																																																																																																																					1
GGAGAG		1																																																																																																																																																				1
GGAGCC	1																																																																																																																																																					1
GGAGGG	1																																																																																																																																																					1
GGATCG	1																																																																																																																																																					1
GGATGG	1																																																																																																																																																					1
GGCAAT	1																																																																																																																																																					1
GGCCCA	1																																																																																																																																																					1
GGCGCC	1																																																																																																																																																					1
GGCGGT	1																																																																																																																																																					1
GGCGTC		1																																																																																																																																																				1
GGCTCC	3																																																																																																																																																					3
GGCTCG	1																																																																																																																																																					1
GGCTCT	1																																																																																																																																																					1
GGCTGC	3																																																																																																																																																					3
GGCTGG	2																																																																																																																																																					2
GGCTTT	1																																																																																																																																																					1
GGGAGA	1																																																																																																																																																					1
GGGATC	1																																																																																																																																																					1
GGGGTT	1																																																																																																																																																					1
GGTGAC	1																																																																																																																																																					1
GGTGAG	1																																																																																																																																																					1
GGTGGC	2																																																																																																																																																					2
GGTTAT	1																																																																																																																																																					1
GTAGAG	1																																																																																																																																																					1
GTATAG	1																																																																																																																																																					1
GTATAT	1																																																																																																																																																					1
GTCAAG	1																																																																																																																																																					1
GTCAAT	2																																																																																																																																																					2
GTCATC	1																																																																																																																																																					1
GTCCTT						1																																																																																																																																																1
GTCGGA	1																																																																																																																																																					1
GTGGTA	1																																																																																																																																																					1
GTGTAT	1																																																																																																																																																					1
GTTGCA	1																																																																																																																																																					1
GTTGGT	1	1																																																																																																																																																				2
TAAAAA	3	1																																																																																																																																																				4
TAAAAT	1																																																																																																																																																					1
TAATAT	3																																																																																																																																																					3
TAATTA	1																																																																																																																																																					1
TAATTG	1																																																																																																																																																					1
TAATTT	2																																																																																																																																																					2
TATAAT	4																																																																																																																																																					4
TATCGT	1																																																																																																																																																					1
TATGCA	1																																																																																																																																																					1
TATTAA	3																																																																																																																																																					3
TATTTC	1																																																																																																																																																					1
TATTTT	2																																																																																																																																																					2
TCACAT	1																																																																																																																																																					1
TCAGGA	1																																																																																																																																																					1
TCATCG	5																																																																																																																																																					5
TCCAAT	1																																																																																																																																																					1
TCCAGC	1		1																																																																																																																																																			2
TCCAGT	1																																																																																																																																																					1
TCCCCC	1																																																																																																																																																					1
TCCCTA		1																																																																																																																																																				1
TCCCTC	1																																																																																																																																																					1
TCCTCA	1																																																																																																																																																					1
TCCTCG	2																																																																																																																																																					2
TCCTCT	1																																																																																																																																																					1
TCGCTA	1																																																																																																																																																					1
TCGGGA	1																																																																																																																																																					1
TCGGGC	1																																																																																																																																																					1
TCGTCA	1																																																																																																																																																					1
TCGTTG	1																																																																																																																																																					1
TCTACG	1																																																																																																																																																					1
TCTATA	1																																																																																																																																																					1
TCTCGC	1																																																																																																																																																					1
TCTGAG	1																																																																																																																																																					1
TCTGCT	1																																																																																																																																																					1
TCTGGC	1																																																																																																																																																					1
TCTGTT	2																																																																																																																																																					2
TCTTCC	4																																																																																																																																																					4
TCTTCG	1																																																																																																																																																					1
TCTTTT	4																																																																																																																																																					4
TGAAAC		1																																																																																																																																																				1
TGAAGA	1	1																																																																																																																																																				2
TGACGA	1		1																																																																																																																																																			2
TGAGAA	1																																																																																																																																																					1
TGAGAG		1																																																																																																																																																				1
TGAGCG	1																																																																																																																																																					1
TGAGGA	1																																																																																																																																																					1
TGATGT	2																																																																																																																																																					2
TGATTC	1																																																																																																																																																					1
TGCAGA	1																																																																																																																																																					1
TGCCAC		1																																																																																																																																																				1
TGCCCT	1																																																																																																																																																					1
TGCTGT	4																																																																																																																																																					4
TGCTTC	1																																																																																																																																																					1
TGCTTT	1																																																																																																																																																					1
TGGCCG	1																																																																																																																																																					1
TGGCTG		1																																																																																																																																																				1
TGGGTG	1																																																																																																																																																					1
TGGTGA	1																																																																																																																																																					1
TGGTTG	1																																																																																																																																																					1
TGTACA	1																																																																																																																																																					1
TGTCCT	1																																																																																																																																																					1
TGTGAC	1																																																																																																																																																					1
TGTGAG	1																																																																																																																																																					1
TGTGTA	1																																																																																																																																																					1
TGTTCC	1																																																																																																																																																					1
TGTTGC		1																																																																																																																																																				1
TTAATA	9																																																																																																																																																					9
TTAATT	1																																																																																																																																																					1
TTATCA	1																																																																																																																																																					1
TTATTT	1																																																																																																																																																					1
TTCAGG	1																																																																																																																																																					1
TTCGGG	1																																																																																																																																																					1
TTCTCA	1																																																																																																																																																					1
TTCTCT	2																																																																																																																																																					2
TTCTTG	1																																																																																																																																																					1
TTCTTT	2	1																																																																																																																																																				3
TTGGGA	2																																																																																																																																																					2
TTGGGT		1																																																																																																																																																				1
TTGTCC	1																																																																																																																																																					1
TTTAGA	1																																																																																																																																																					1
TTTATT	5	3																																																																																																																																																				8
TTTCAA		1																																																																																																																																																				1
TTTCCA		1																																																																																																																																																				1
TTTCCC	1																																																																																																																																																					1
TTTCTT	7																																																																																																																																																					7
TTTGAT	1																																																																																																																																																					1
TTTGTT	1																																																																																																																																																					1
TTTTAA	4																																																																																																																																																					4
TTTTAC	1																																																																																																																																																					1
TTTTAT	9		1																																																																																																																																																			10
TTTTCT	4	2																																																																																																																																																				6
TTTTGT		1																																																																																																																																																				1
TTTTTA	15	5																																																																																																																																																				20
TTTTTC	10	3	1																																																																																																																																																			14

Frequency of classified repeat types (considering sequence complementary)
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Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	34	22	12	14	15	13	7	5	5	4	3	4	5		1	2	2			1	2						1	1	1		2		1	1					1	1		1	1						1			1										1		1																	1																																																			1	168
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	1	1	2	2	2	3	2		1			3	2		1	1			1		1									1																					1																													1																																																				30
AC/GT	-	-	-	40	21	9	10	6	5	5	2	2	2	1	2	1									1			1	2	1		1				1																																																																																																																		113
AG/CT	-	-	-	102	49	27	17	18	12	8	6	5	4	3			1		2			1	1		1				1	1																																																																																																																								259
AT/AT	-	-	-	178	66	34	25	12	9	9	3			2			1																																																																																																																																					339
CG/CG	-	-	-	2																																																																																																																																																		2
AAC/GTT	-	-	27	12	7	1	2	1		1	1																																																																																																																																											52
AAG/CTT	-	-	53	24	5	5	12	7	3	3		1	3	1		1		2	1		1	1	1	1	1	1																																																																																																																												127
AAT/ATT	-	-	59	26	11	8	5		2	2			1		1									1																																																																																																																														116
ACC/GGT	-	-	19	7	2	2	1																																																																																																																																															31
ACG/CGT	-	-	6	2							1																																																																																																																																											9
ACT/AGT	-	-	13	6	3	1	1	1	1	1			1		1		1																																																																																																																																					30
AGC/CTG	-	-	27	15	2	2	3		1																																																																																																																																													50
AGG/CCT	-	-	13	6	3	3	2	1	1	1					1																																																																																																																																							31
ATC/ATG	-	-	22	10	6	3	2	2																																																																																																																																														45
CCG/CGG	-	-	18	6																																																																																																																																																		24
AAAC/GTTT	-	4																																																																																																																																																				4
AAAG/CTTT	-	65	16	9	5	5	4	1		2		1																																																																																																																																										108
AAAT/ATTT	-	56	10	4	1	1		1																																																																																																																																														73
AACC/GGTT	-	6	1																																																																																																																																																			7
AAGC/CTTG	-	2																																																																																																																																																				2
AAGG/CCTT	-	4																																																																																																																																																				4
AATC/ATTG	-	18	4	3	1																																																																																																																																																	26
AATG/ATTC	-	13	4																																																																																																																																																			17
AATT/AATT	-	19	6			1																																																																																																																																																26
ACAG/CTGT	-	1	1																																																																																																																																																			2
ACAT/ATGT	-	33	14	5	2																																																																																																																																																	54
ACCG/CGGT	-	1																																																																																																																																																				1
ACCT/AGGT	-	2	1	1																																																																																																																																																		4
ACTC/AGTG	-	6	1	1																																																																																																																																																		8
ACTG/AGTC	-	2																																																																																																																																																				2
AGAT/ATCT	-	7		1	1																																																																																																																																																	9
AGCG/CGCT	-	2																																																																																																																																																				2
AGCT/AGCT	-	1																																																																																																																																																				1
AGGG/CCCT	-	3		1																																																																																																																																																		4
ATCC/ATGG	-	4																																																																																																																																																				4
ATGC/ATGC	-			1																																																																																																																																																		1
AAAAC/GTTTT	17	5		1		1																																																																																																																																																24
AAAAG/CTTTT	195	47	17	4	3			1																																																																																																																																														267
AAAAT/ATTTT	165	35	7	4		1		1																																																																																																																																														213
AAACC/GGTTT	7																																																																																																																																																					7
AAACG/CGTTT	1		1																																																																																																																																																			2
AAACT/AGTTT	6																																																																																																																																																					6
AAAGC/CTTTG	9	1																																																																																																																																																				10
AAAGG/CCTTT	21	4	1																																																																																																																																																			26
AAAGT/ACTTT	2																																																																																																																																																					2
AAATC/ATTTG	8	4																																																																																																																																																				12
AAATG/ATTTC	9		2																																																																																																																																																			11
AAATT/AATTT	49	1																																																																																																																																																				50
AACAC/GTGTT	4																																																																																																																																																					4
AACCC/GGGTT	7																																																																																																																																																					7
AACCG/CGGTT	4																																																																																																																																																					4
AACCT/AGGTT	2	1	1																																																																																																																																																			4
AACGC/CGTTG	1																																																																																																																																																					1
AACTC/AGTTG	1																																																																																																																																																					1
AACTG/AGTTC	2																																																																																																																																																					2
AAGAC/CTTGT	3																																																																																																																																																					3
AAGAG/CTCTT	17	1	1																																																																																																																																																			19
AAGAT/ATCTT	2																																																																																																																																																					2
AAGCC/CTTGG	2																																																																																																																																																					2
AAGCG/CGCTT	1																																																																																																																																																					1
AAGGC/CCTTG	1																																																																																																																																																					1
AAGGG/CCCTT	8	1																																																																																																																																																				9
AAGGT/ACCTT	1																																																																																																																																																					1
AAGTC/ACTTG	3																																																																																																																																																					3
AAGTG/ACTTC	2																																																																																																																																																					2
AATAC/ATTGT	5																																																																																																																																																					5
AATAG/ATTCT	1	1																																																																																																																																																				2
AATAT/ATATT	29	1																																																																																																																																																				30
AATCC/ATTGG	3	2		1																																																																																																																																																		6
AATCG/ATTCG	2																																																																																																																																																					2
AATCT/AGATT	2	1																																																																																																																																																				3
AATGC/ATTGC	5	2	1																																																																																																																																																			8
AATGG/ATTCC	1	1																																																																																																																																																				2
AATGT/ACATT		1																																																																																																																																																				1
AATTC/AATTG	7	1																																																																																																																																																				8
ACACC/GGTGT	3																																																																																																																																																					3
ACACG/CGTGT	2	1																																																																																																																																																				3
ACACT/AGTGT	2																																																																																																																																																					2
ACAGC/CTGTG	1																																																																																																																																																					1
ACAGG/CCTGT	4																																																																																																																																																					4
ACAGT/ACTGT	10																																																																																																																																																					10
ACATC/ATGTG	2																																																																																																																																																					2
ACATG/ATGTC	6	1																																																																																																																																																				7
ACCAG/CTGGT	1																																																																																																																																																					1
ACCAT/ATGGT	6																																																																																																																																																					6
ACCCC/GGGGT	4																																																																																																																																																					4
ACCCG/CGGGT	1																																																																																																																																																					1
ACCCT/AGGGT	1	1																																																																																																																																																				2
ACCGG/CCGGT	2																																																																																																																																																					2
ACCGT/ACGGT	4																																																																																																																																																					4
ACCTC/AGGTG	3																																																																																																																																																					3
ACCTG/AGGTC	3																																																																																																																																																					3
ACGAG/CGTCT	2	1																																																																																																																																																				3
ACGCC/CGTGG	2																																																																																																																																																					2
ACGGC/CCGTG	1																																																																																																																																																					1
ACGGG/CCCGT	1																																																																																																																																																					1
ACTAG/AGTCT	3	1																																																																																																																																																				4
ACTAT/AGTAT	5	1																																																																																																																																																				6
ACTCC/AGTGG	1																																																																																																																																																					1
ACTCG/AGTCG		1																																																																																																																																																				1
ACTCT/AGAGT	2																																																																																																																																																					2
AGAGG/CCTCT	8	3																																																																																																																																																				11
AGATC/ATCTG	1	3																																																																																																																																																				4
AGATG/ATCTC	7	3																																																																																																																																																				10
AGCAT/ATGCT	1																																																																																																																																																					1
AGCCC/CTGGG	2																																																																																																																																																					2
AGCCG/CGGCT	1																																																																																																																																																					1
AGCGG/CCGCT	1																																																																																																																																																					1
AGCTC/AGCTG	4																																																																																																																																																					4
AGGAT/ATCCT	4	1																																																																																																																																																				5
AGGCG/CCTCG	2																																																																																																																																																					2
AGGGG/CCCCT	10																																																																																																																																																					10
ATATC/ATATG	10																																																																																																																																																					10
ATCCC/ATGGG	6	1																																																																																																																																																				7
CCGCG/CGCGG	1																																																																																																																																																					1
AAAAAC/GTTTTT	4	1																																																																																																																																																				5
AAAAAG/CTTTTT	62	15	6					1																																																																																																																																														84
AAAAAT/ATTTTT	65	10	2																																																																																																																																																			77
AAAACC/GGTTTT	4																																																																																																																																																					4
AAAAGC/CTTTTG	3																																																																																																																																																					3
AAAAGG/CCTTTT	5	1	1				1																																																																																																																																															8
AAAAGT/ACTTTT	2																																																																																																																																																					2
AAAATC/ATTTTG	1																																																																																																																																																					1
AAAATG/ATTTTC	2	1																																																																																																																																																				3
AAAATT/AATTTT	15																																																																																																																																																					15
AAACAC/GTGTTT	1																																																																																																																																																					1
AAACAG/CTGTTT	3																																																																																																																																																					3
AAACCC/GGGTTT	2	1																																																																																																																																																				3
AAACGG/CCGTTT	1																																																																																																																																																					1
AAACTG/AGTTTC		1																																																																																																																																																				1
AAAGAC/CTTTGT	1																																																																																																																																																					1
AAAGAG/CTCTTT	6	1																																																																																																																																																				7
AAAGAT/ATCTTT	1																																																																																																																																																					1
AAAGCC/CTTTGG	2																																																																																																																																																					2
AAAGCT/AGCTTT	1																																																																																																																																																					1
AAAGGC/CCTTTG	1																																																																																																																																																					1
AAAGGG/CCCTTT	3																																																																																																																																																					3
AAAGTC/ACTTTG	1																																																																																																																																																					1
AAAGTG/ACTTTC	1																																																																																																																																																					1
AAATAG/ATTTCT	3																																																																																																																																																					3
AAATAT/ATATTT	2																																																																																																																																																					2
AAATCT/AGATTT	2																																																																																																																																																					2
AAATGG/ATTTCC		1																																																																																																																																																				1
AAATGT/ACATTT	1																																																																																																																																																					1
AAATTG/AATTTC		1																																																																																																																																																				1
AAATTT/AAATTT	1																																																																																																																																																					1
AACAAG/CTTGTT	5		1																																																																																																																																																			6
AACACC/GGTGTT	3	2																																																																																																																																																				5
AACAGC/CTGTTG	7	3																																																																																																																																																				10
AACAGG/CCTGTT	2																																																																																																																																																					2
AACAGT/ACTGTT	1																																																																																																																																																					1
AACATC/ATGTTG	3																																																																																																																																																					3
AACATG/ATGTTC	1																																																																																																																																																					1
AACCAC/GGTTGT	2		1																																																																																																																																																			3
AACCAT/ATGGTT	1																																																																																																																																																					1
AACCCC/GGGGTT	2																																																																																																																																																					2
AACCCG/CGGGTT	1		1																																																																																																																																																			2
AACCTG/AGGTTC	1																																																																																																																																																					1
AACGAC/CGTTGT	2																																																																																																																																																					2
AACGAT/ATCGTT	1																																																																																																																																																					1
AACGTC/ACGTTG	1																																																																																																																																																					1
AACTAC/AGTTGT	1																																																																																																																																																					1
AACTGC/AGTTGC	1																																																																																																																																																					1
AACTGG/AGTTCC	1																																																																																																																																																					1
AAGAAT/ATTCTT	1																																																																																																																																																					1
AAGACC/CTTGGT	2																																																																																																																																																					2
AAGACG/CGTCTT	3	1																																																																																																																																																				4
AAGAGG/CCTCTT	10		1																																																																																																																																																			11
AAGATG/ATCTTC	1	2																																																																																																																																																				3
AAGCAG/CTGCTT	2																																																																																																																																																					2
AAGCCC/CTTGGG	1																																																																																																																																																					1
AAGCCG/CGGCTT	1	1																																																																																																																																																				2
AAGCGG/CCGCTT	1																																																																																																																																																					1
AAGCTG/AGCTTC	1																																																																																																																																																					1
AAGGAC/CCTTGT	2					1																																																																																																																																																3
AAGGAG/CCTTCT	3	1																																																																																																																																																				4
AAGGCG/CCTTCG	1																																																																																																																																																					1
AAGGGC/CCCTTG	2																																																																																																																																																					2
AAGGTC/ACCTTG	1																																																																																																																																																					1
AAGTAG/ACTTCT	1																																																																																																																																																					1
AAGTCC/ACTTGG	1																																																																																																																																																					1
AAGTGG/ACTTCC	1																																																																																																																																																					1
AATAGT/ACTATT	1																																																																																																																																																					1
AATATC/ATATTG	1	1																																																																																																																																																				2
AATATT/AATATT	25																																																																																																																																																					25
AATCAG/ATTCTG	1																																																																																																																																																					1
AATCAT/ATGATT	3																																																																																																																																																					3
AATCCC/ATTGGG	2																																																																																																																																																					2
AATCGC/ATTGCG	1																																																																																																																																																					1
AATGAG/ATTCTC	4		1																																																																																																																																																			5
AATGAT/ATCATT	1																																																																																																																																																					1
AATGCC/ATTGGC	2																																																																																																																																																					2
AATGGC/ATTGCC	2																																																																																																																																																					2
AATGGG/ATTCCC	1																																																																																																																																																					1
AATGTC/ACATTG	2																																																																																																																																																					2
AATGTG/ACATTC	2																																																																																																																																																					2
AATTAC/AATTGT	1																																																																																																																																																					1
AATTAG/AATTCT	1																																																																																																																																																					1
AATTAT/AATTAT	8																																																																																																																																																					8
AATTCC/AATTGG	1																																																																																																																																																					1
ACACAT/ATGTGT	2																																																																																																																																																					2
ACACCC/GGGTGT	2																																																																																																																																																					2
ACACGC/CGTGTG	1																																																																																																																																																					1
ACACTC/AGTGTG	1																																																																																																																																																					1
ACAGCC/CTGTGG	1	1																																																																																																																																																				2
ACAGCG/CGCTGT	1																																																																																																																																																					1
ACAGGG/CCCTGT	2																																																																																																																																																					2
ACAGTC/ACTGTG	1																																																																																																																																																					1
ACATAT/ATATGT	2																																																																																																																																																					2
ACATGG/ATGTCC	2																																																																																																																																																					2
ACATGT/ACATGT	1																																																																																																																																																					1
ACCACG/CGTGGT	2																																																																																																																																																					2
ACCACT/AGTGGT	2			1	2																																																																																																																																																	5
ACCAGC/CTGGTG	1	1																																																																																																																																																				2
ACCAGG/CCTGGT		1																																																																																																																																																				1
ACCAGT/ACTGGT	1																																																																																																																																																					1
ACCATC/ATGGTG	3																																																																																																																																																					3
ACCATG/ATGGTC	1																																																																																																																																																					1
ACCCCC/GGGGGT	1																																																																																																																																																					1
ACCCCG/CGGGGT	1																																																																																																																																																					1
ACCCTC/AGGGTG	1																																																																																																																																																					1
ACCCTG/AGGGTC	1																																																																																																																																																					1
ACCGAG/CGGTCT	1																																																																																																																																																					1
ACCGCC/CGGTGG	3																																																																																																																																																					3
ACCGTC/ACGGTG	1																																																																																																																																																					1
ACCTAT/AGGTAT	1																																																																																																																																																					1
ACCTCC/AGGTGG	2																																																																																																																																																					2
ACCTCG/AGGTCG	1																																																																																																																																																					1
ACCTCT/AGAGGT	1																																																																																																																																																					1
ACCTGG/AGGTCC		1																																																																																																																																																				1
ACGAGG/CCTCGT	4																																																																																																																																																					4
ACGATC/ATCGTG	2																																																																																																																																																					2
ACGATG/ATCGTC	10		1																																																																																																																																																			11
ACGCAG/CGTCTG	1																																																																																																																																																					1
ACGCCG/CGGCGT		1																																																																																																																																																				1
ACGCGG/CCGCGT	1																																																																																																																																																					1
ACGCTC/AGCGTG	1																																																																																																																																																					1
ACGCTG/AGCGTC	1	1																																																																																																																																																				2
ACGGAG/CCGTCT	1																																																																																																																																																					1
ACGGCC/CCGTGG	4																																																																																																																																																					4
ACGTAG/ACGTCT	1																																																																																																																																																					1
ACTCAG/AGTCTG	1																																																																																																																																																					1
ACTCCG/AGTCGG	2																																																																																																																																																					2
ACTCTC/AGAGTG	1	1																																																																																																																																																				2
ACTGCC/AGTGGC	1	1																																																																																																																																																				2
ACTGCG/AGTCGC	1	1																																																																																																																																																				2
ACTGCT/AGCAGT	2																																																																																																																																																					2
AGAGCC/CTCTGG	4																																																																																																																																																					4
AGAGCG/CGCTCT	2																																																																																																																																																					2
AGAGCT/AGCTCT	2																																																																																																																																																					2
AGAGGG/CCCTCT	7	2																																																																																																																																																				9
AGATAT/ATATCT	2																																																																																																																																																					2
AGATCT/AGATCT	1																																																																																																																																																					1
AGATGC/ATCTGC	1																																																																																																																																																					1
AGATGG/ATCTCC	1																																																																																																																																																					1
AGCAGG/CCTGCT	3																																																																																																																																																					3
AGCATC/ATGCTG	4																																																																																																																																																					4
AGCCCC/CTGGGG	3	1																																																																																																																																																				4
AGCCCG/CGGGCT	3	1																																																																																																																																																				4
AGCCGC/CGGCTG	5	2																																																																																																																																																				7
AGCCGG/CCGGCT	6																																																																																																																																																					6
AGCCTG/AGGCTC		1																																																																																																																																																				1
AGCGAT/ATCGCT	1	1																																																																																																																																																				2
AGCGCC/CGCTGG	1																																																																																																																																																					1
AGCGCG/CGCGCT	2																																																																																																																																																					2
AGCGGC/CCGCTG	4	1																																																																																																																																																				5
AGCGGG/CCCGCT	1	1																																																																																																																																																				2
AGCTCC/AGCTGG	4		1																																																																																																																																																			5
AGCTGC/AGCTGC	2																																																																																																																																																					2
AGGATC/ATCCTG	1																																																																																																																																																					1
AGGATG/ATCCTC	8																																																																																																																																																					8
AGGCCC/CCTGGG	1																																																																																																																																																					1
AGGCCG/CCTCGG	1																																																																																																																																																					1
AGGCGC/CCTGCG	1																																																																																																																																																					1
AGGCGG/CCGCCT	2																																																																																																																																																					2
AGGGAT/ATCCCT		1																																																																																																																																																				1
AGGGGC/CCCCTG	1																																																																																																																																																					1
AGGGGG/CCCCCT	5																																																																																																																																																					5
ATATGC/ATATGC	1																																																																																																																																																					1
ATCATG/ATCATG	1																																																																																																																																																					1
ATCCCC/ATGGGG	1																																																																																																																																																					1
ATCCCG/ATCGGG	3																																																																																																																																																					3
ATCGCC/ATGGCG	2																																																																																																																																																					2
ATCGGC/ATGCCG	2																																																																																																																																																					2
CCCGCG/CGCGGG	1																																																																																																																																																					1
CCGGCG/CCGGCG	1																																																																																																																																																					1
