Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-4/megassr/results/hub_GCA_011420435.1/fasta/hub_GCA_011420435.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              136
Total size of examined sequences (bp):           38039379
Total number of identified SSRs:                 3243
Number of SSR containing sequences:              95
Number of sequences containing more than 1 SSR:  80
Number of SSRs present in compound formation:    253


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	182
2	708
3	512
4	351
5	910
6	580

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	12	12	8	10	7	5	5		1	5	2		2	1	2	1	2	1	1	1					1	1	1			1	1			1				3																							1			1																																																	89
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2		1				1						1	1							1																																																																																											1	8
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-					1															1																																																																							1																						3
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	21	17	6	6	5	1	3	5	3		2	2		1		1				2					1									2				1														1	1																																											1																	82
AC	-	-	-	6	8	4	1						1																	1																																																																																																				21
AG	-	-	-	28	14	13	4	5	3	2	1	1	4				1	1	1		1				1																																																																																																									80
AT	-	-	-	75	24	16	12	8	3	3	2		1																																																																																																																					144
CA	-	-	-	11	4	3	1	4	1	2	1				1																																																																																																																			28
CT	-	-	-	26	9	4	1	2	3	1	2	1	2	1			1						1																																																																																																											54
GA	-	-	-	11	7	3	4	7	1	4	2	2																																																																																																																						41
GC	-	-	-	2																																																																																																																														2
GT	-	-	-	12	3		1	2	3		1	1																	1						1																			1																																																																												26
TA	-	-	-	101	43	19	10	5	6	4	1			1			1																																																																																																																	191
TC	-	-	-	35	17	8	8	6	5	1	1			1																																																																																																																				82
TG	-	-	-	11	6	3	5	2	2	2	1		1	1		1										1		1				1		1																																																																																																39
AAC	-	-	3	1																																																																																																																														4
AAG	-	-	10	6	2		2		1	1			1								1			1	1																																																																																																									26
AAT	-	-	13	8	5	3	1			1																	1																																																																																																							32
ACA	-	-	4	2																																																																																																																														6
ACG	-	-	1																																																																																																																															1
ACT	-	-	4		2																																																																																																																													6
AGA	-	-	3	6		1		1						1									1																																																																																																											13
AGC	-	-	1	2			1																																																																																																																											4
AGG	-	-	1		1																																																																																																																													2
AGT	-	-	2	2			1		2								1																																																																																																																	8
ATA	-	-	4	1	2		1		1																																																																																																																									9
ATC	-	-	4		2	1																																																																																																																												7
ATG	-	-	2	2			1																																																																																																																											5
ATT	-	-	14	4	2	2	1																																																																																																																											23
CAA	-	-	9	4	1		1																																																																																																																											15
CAC	-	-	4		1	1																																																																																																																												6
CAG	-	-	4	2	1																																																																																																																													7
CAT	-	-	5	2				2																																																																																																																										9
CCA	-	-	5	1	1	1		1																																																																																																																										9
CCG	-	-	3	1																																																																																																																														4
CCT	-	-	1			1																																																																																																																												2
CGA	-	-	1	1																																																																																																																														2
CGC	-	-	3																																																																																																																															3
CGG	-	-	2																																																																																																																															2
CGT	-	-	1																																																																																																																															1
CTA	-	-	2										1																																																																																																																					3
CTC	-	-	2		1	1			1																																																																																																																									5
CTG	-	-	4	2		1																																																																																																																												7
CTT	-	-	16	4	1	1	2	1		1													1																																																																																																											27
GAA	-	-	6	2		2	2	1	1					1				1	1																																																																																																															17
GAC	-	-	1	1																																																																																																																														2
GAG	-	-	4	1			2																																																																																																																											7
GAT	-	-	3	3	1	1																																																																																																																												8
GCA	-	-	6				1																																																																																																																											7
GCC	-	-	2	3																																																																																																																														5
GCG	-	-	4																																																																																																																															4
GCT	-	-	3	1			1		1																																																																																																																									6
GGA	-	-	3	1	1			1							1																																																																																																																			7
GGC	-	-	4	2																																																																																																																														6
GGT	-	-	1	3		1																																																																																																																												5
GTA	-	-	3	2		1																																																																																																																												6
GTG	-	-	2																																																																																																																															2
GTT	-	-	1	1	1	1		1		1																																																																																																																								6
TAA	-	-	5	3		1																																																																																																																												9
TAC	-	-	1	1	1											1																																																																																																																		4
TAG	-	-	1	1						1																																																																																																																								3
TAT	-	-	12	3	2	1			1						1																																																																																																																			20
TCA	-	-	4		1		1																																																																																																																											6
TCC	-	-	2	4		1				1																																																																																																																								8
TCG	-	-	2								1																																																																																																																							3
TCT	-	-	10	2	1		1	2	1					1				1								1										1																																																																																														21
TGA	-	-	3	3	2	1																																																																																																																												9
TGC	-	-	10	7	1	1																																																																																																																												19
TGG	-	-	7	2																																																																																																																														9
TGT	-	-	9		4	1	1																																																																																																																											15
TTA	-	-	11	8	1		2			1			1																																																																																																																					24
TTC	-	-	7	1	1	1	4	3		1			1			1																																																																																																																		20
TTG	-	-	2	2	1						1																																																																																																																							6
AAAC	-	1																																																																																																																																1
AAAG	-	16	8	1	1	1	1			1																																																																																																																								29
AAAT	-	9	3	2																																																																																																																														14
AAGA	-	6		1																																																																																																																														7
AATA	-	3																																																																																																																																3
AATC	-	2		1																																																																																																																														3
AATG	-	2																																																																																																																																2
AATT	-	7	2																																																																																																																															9
ACAA	-	1																																																																																																																																1
ACAG	-		1																																																																																																																															1
ACAT	-	4																																																																																																																																4
ACCA	-	1	1																																																																																																																															2
ACCG	-	1																																																																																																																																1
AGAA	-	9		2			1																																																																																																																											12
AGAC	-	1																																																																																																																																1
AGAT	-	2																																																																																																																																2
AGCG	-	1																																																																																																																																1
AGGG	-	2																																																																																																																																2
AGGT	-		1																																																																																																																															1
AGTG	-	2																																																																																																																																2
ATAA	-	5				1																																																																																																																												6
ATAC	-	2	1	2																																																																																																																														5
ATAG	-	1																																																																																																																																1
ATCA	-		1																																																																																																																															1
ATGA	-		1																																																																																																																															1
ATGG	-	1																																																																																																																																1
ATGT	-	4	2																																																																																																																															6
ATTA	-	5				1																																																																																																																												6
ATTT	-	13	1		1																																																																																																																													15
CAAG	-	1																																																																																																																																1
CAAT	-	1																																																																																																																																1
CATA	-	3	1																																																																																																																															4
CATC	-	1																																																																																																																																1
CATG	-			1																																																																																																																														1
CATT	-	1																																																																																																																																1
CCAA	-	1																																																																																																																																1
CTAC	-	2																																																																																																																																2
CTAT	-	1		1	1																																																																																																																													3
CTCA	-	1		1																																																																																																																														2
CTTC	-	2																																																																																																																																2
CTTT	-	4	4		1																																																																																																																													9
GAAA	-	6	1				2																																																																																																																											9
GAAG	-	1																																																																																																																																1
GAAT	-	1	2																																																																																																																															3
GAGC	-	1																																																																																																																																1
GATT	-	3	1																																																																																																																															4
GGAG	-	1																																																																																																																																1
GGAT	-	1																																																																																																																																1
GGTT	-	1																																																																																																																																1
GTAT	-	3	3		1																																																																																																																													7
GTCA	-	1																																																																																																																																1
GTGA	-	2	1																																																																																																																															3
GTTG	-	1																																																																																																																																1
TAAA	-	3	1																																																																																																																															4
TAAT	-	2	4																																																																																																																															6
TACA	-	9	1	2	1																																																																																																																													13
TAGA	-	1																																																																																																																																1
TAGC	-	1																																																																																																																																1
TAGG	-			1																																																																																																																														1
TATG	-	3	1																																																																																																																															4
TATT	-	10																																																																																																																																10
TCAA	-	1		1																																																																																																																														2
TCAT	-	2	1																																																																																																																															3
TCCA	-	1																																																																																																																																1
TCCC	-			1																																																																																																																														1
TCTA	-	2																																																																																																																																2
TCTT	-	3	1	1	1					1																																																																																																																								7
TGAA	-	5																																																																																																																																5
TGAC	-	1																																																																																																																																1
TGAG	-	1																																																																																																																																1
TGAT	-	3																																																																																																																																3
TGGT	-	1																																																																																																																																1
TGTA	-	5	5	1																																																																																																																														11
TTAT	-	2	1	1																																																																																																																														4
TTCA	-	2																																																																																																																																2
TTCC	-	1																																																																																																																																1
TTCT	-	4	1	1		1																																																																																																																												7
TTGA	-	8	2	1	1																																																																																																																													12
TTGC	-	1																																																																																																																																1
TTGG	-	1																																																																																																																																1
TTGT	-	1																																																																																																																																1
TTTA	-	11	3	1				1																																																																																																																										16
TTTC	-	16	2	3	1	2		1				1																																																																																																																						26
TTTG	-	1																																																																																																																																1
AAAAC	5																																																																																																																																	5
AAAAG	46	11	5	3				1																																																																																																																										66
AAAAT	27	7	2	1				1																																																																																																																										38
AAACA	2	1																																																																																																																																3
AAACC	1																																																																																																																																	1
AAAGA	12	4	1																																																																																																																															17
AAAGC	2																																																																																																																																	2
AAAGG	5	1																																																																																																																																6
AAAGT	1																																																																																																																																	1
AAATA	9	3		1																																																																																																																														13
AAATC	1	1																																																																																																																																2
AAATG	1		1																																																																																																																															2
AAATT	7																																																																																																																																	7
AACAA	1																																																																																																																																	1
AACAC	1																																																																																																																																	1
AACCC	1																																																																																																																																	1
AACTA	3																																																																																																																																	3
AAGAA	13	2																																																																																																																																15
AAGAG	2		1																																																																																																																															3
AAGTA	1																																																																																																																																	1
AAGTC	1																																																																																																																																	1
AAGTG	2																																																																																																																																	2
AATAA	11	4	1																																																																																																																															16
AATAT	5																																																																																																																																	5
AATCA	1	1																																																																																																																																2
AATCC	2	1																																																																																																																																3
AATCG	1																																																																																																																																	1
AATGG		1																																																																																																																																1
AATTA	6																																																																																																																																	6
AATTG	1																																																																																																																																	1
AATTT	3	1																																																																																																																																4
ACAAC	2																																																																																																																																	2
ACACC	1																																																																																																																																	1
ACAGC	1																																																																																																																																	1
ACAGG	1																																																																																																																																	1
ACATG	2																																																																																																																																	2
ACCAA	1																																																																																																																																	1
ACCAG	1																																																																																																																																	1
ACCCC	2																																																																																																																																	2
ACCCT		1																																																																																																																																1
ACCGA	1																																																																																																																																	1
ACCTA			1																																																																																																																															1
ACCTC	1																																																																																																																																	1
ACCTG	1																																																																																																																																	1
ACGAA	1																																																																																																																																	1
ACGCA	1																																																																																																																																	1
ACTAG	2																																																																																																																																	2
ACTAT	1																																																																																																																																	1
AGAAA	14		2																																																																																																																															16
AGAAG	5	1																																																																																																																																6
AGACT		1																																																																																																																																1
AGAGA	3																																																																																																																																	3
AGATG	1																																																																																																																																	1
AGCAA	2																																																																																																																																	2
AGCCA	1																																																																																																																																	1
AGCCC	1																																																																																																																																	1
AGCTG	1																																																																																																																																	1
AGGAA	1																																																																																																																																	1
AGGCG	1																																																																																																																																	1
AGGGA	3																																																																																																																																	3
AGGTG	1																																																																																																																																	1
AGGTT	1																																																																																																																																	1
AGTAC	2																																																																																																																																	2
AGTAG	2																																																																																																																																	2
AGTCA	1																																																																																																																																	1
ATAAA	22	3																																																																																																																																25
ATAAT	1	1																																																																																																																																2
ATACC	3																																																																																																																																	3
ATACT	1																																																																																																																																	1
ATAGA		1																																																																																																																																1
ATAGG	1																																																																																																																																	1
ATATA	3																																																																																																																																	3
ATATC	1																																																																																																																																	1
ATATT	9																																																																																																																																	9
ATCAG	1																																																																																																																																	1
ATCAT	1																																																																																																																																	1
ATCCC	1																																																																																																																																	1
ATCTA		1																																																																																																																																1
ATCTC		1																																																																																																																																1
ATGAG	1																																																																																																																																	1
ATGAT	2																																																																																																																																	2
ATGCA	3																																																																																																																																	3
ATGGG		1																																																																																																																																1
ATGTC	1																																																																																																																																	1
ATTAA	4																																																																																																																																	4
ATTAG	1																																																																																																																																	1
ATTCA	3																																																																																																																																	3
ATTGA	1	1																																																																																																																																2
ATTGG		1																																																																																																																																1
ATTGT	1																																																																																																																																	1
ATTTA	2																																																																																																																																	2
ATTTC	3																																																																																																																																	3
ATTTG		1																																																																																																																																1
ATTTT	14	3																																																																																																																																17
CAAAG	2																																																																																																																																	2
CAAAT	2																																																																																																																																	2
CAAGC	1																																																																																																																																	1
CAAGT	1																																																																																																																																	1
CAATA	2																																																																																																																																	2
CAATG	1																																																																																																																																	1
CAATT	1																																																																																																																																	1
CAGAT		1																																																																																																																																1
CAGCC	1																																																																																																																																	1
CATAC	1																																																																																																																																	1
CATCT	1	1																																																																																																																																2
CATGA	1																																																																																																																																	1
CATGT	1																																																																																																																																	1
CATTT	1																																																																																																																																	1
CCAAA	1																																																																																																																																	1
CCAAC	1																																																																																																																																	1
CCACA	1																																																																																																																																	1
CCACG	1																																																																																																																																	1
CCATA	1																																																																																																																																	1
CCCAA	1																																																																																																																																	1
CCCAT	2																																																																																																																																	2
CCCCT	4																																																																																																																																	4
CCCGA	1																																																																																																																																	1
CCCTC	2																																																																																																																																	2
CCCTT	2																																																																																																																																	2
CCGCG	1																																																																																																																																	1
CCGGT	1																																																																																																																																	1
CCGTG	1																																																																																																																																	1
CCTAA		1																																																																																																																																1
CCTCC	1																																																																																																																																	1
CCTCT	2																																																																																																																																	2
CCTTC	1																																																																																																																																	1
CCTTT	4	1																																																																																																																																5
CGAAT	1																																																																																																																																	1
CGACT		1																																																																																																																																1
CGTAC	1																																																																																																																																	1
CGTCT	2																																																																																																																																	2
CGTGT		1																																																																																																																																1
CTACA	1																																																																																																																																	1
CTATA	1																																																																																																																																	1
CTATC	1	1																																																																																																																																2
CTCAA	1																																																																																																																																	1
CTCAT	1																																																																																																																																	1
CTCCC	1																																																																																																																																	1
CTCTC	1	1																																																																																																																																2
CTCTT	2																																																																																																																																	2
CTGTA	1																																																																																																																																	1
CTGTC	1																																																																																																																																	1
CTTCC		1																																																																																																																																1
CTTCT	1																																																																																																																																	1
CTTGT	1																																																																																																																																	1
CTTTC	2																																																																																																																																	2
CTTTG	1	1																																																																																																																																2
CTTTT	19	3	2																																																																																																																															24
GAAAA	9	2																																																																																																																																11
GAAAC			1																																																																																																																															1
GAAAG	1		1																																																																																																																															2
GAAAT	1		1																																																																																																																															2
GAACC	1																																																																																																																																	1
GAAGA	2																																																																																																																																	2
GAATA	1																																																																																																																																	1
GAATT	1																																																																																																																																	1
GACCT	2																																																																																																																																	2
GAGAA	1																																																																																																																																	1
GAGAC		1																																																																																																																																1
GAGAG	1																																																																																																																																	1
GAGAT	1																																																																																																																																	1
GAGCC	1																																																																																																																																	1
GAGGA	1																																																																																																																																	1
GAGGC	1																																																																																																																																	1
GATAA	2																																																																																																																																	2
GATAG	1																																																																																																																																	1
GATGG	1																																																																																																																																	1
GATGT	1																																																																																																																																	1
GATTG	1																																																																																																																																	1
GCAAA	1																																																																																																																																	1
GCGTG	1																																																																																																																																	1
GCTGA	2																																																																																																																																	2
GCTTC	1																																																																																																																																	1
GGAAA	2																																																																																																																																	2
GGAAG	1																																																																																																																																	1
GGAAT	1																																																																																																																																	1
GGAGC	1																																																																																																																																	1
GGGAA	1																																																																																																																																	1
GGGAC	1																																																																																																																																	1
GGGAG	1																																																																																																																																	1
GGGAT	1																																																																																																																																	1
GGGGA	1																																																																																																																																	1
GGGTG	2																																																																																																																																	2
GGGTT	1																																																																																																																																	1
GGTAG	1																																																																																																																																	1
GGTAT	1																																																																																																																																	1
GGTCC	1																																																																																																																																	1
GGTGT	1																																																																																																																																	1
GGTTC	1																																																																																																																																	1
GGTTT	1																																																																																																																																	1
GTACG	1																																																																																																																																	1
GTACT	1																																																																																																																																	1
GTCCT	1																																																																																																																																	1
GTTCA	1																																																																																																																																	1
GTTGG	2																																																																																																																																	2
GTTTT	1																																																																																																																																	1
TAAAA	11	3																																																																																																																																14
TAAAT	1																																																																																																																																	1
TAACC	1																																																																																																																																	1
TAATA	3																																																																																																																																	3
TAATG		1																																																																																																																																1
TAATT	5																																																																																																																																	5
TACAC	1																																																																																																																																	1
TACAG	3																																																																																																																																	3
TACCT	1																																																																																																																																	1
TACGG	2																																																																																																																																	2
TACTG	1																																																																																																																																	1
TAGAT	1																																																																																																																																	1
TAGCA	1																																																																																																																																	1
TAGTC	1																																																																																																																																	1
TAGTT	1																																																																																																																																	1
TATAA	2																																																																																																																																	2
TATAC		1																																																																																																																																1
TATAG	1																																																																																																																																	1
TATAT	4																																																																																																																																	4
TATCA	1																																																																																																																																	1
TATTT	20	2	1																																																																																																																															23
TCAAA	3																																																																																																																																	3
TCACC	1																																																																																																																																	1
TCATA	2																																																																																																																																	2
TCATC	1	1																																																																																																																																2
TCCTA	1																																																																																																																																	1
TCCTC	1	1																																																																																																																																2
TCCTG	1																																																																																																																																	1
TCGGT	1																																																																																																																																	1
TCTCC	2	1																																																																																																																																3
TCTTC	1																																																																																																																																	1
TCTTT	13	3	1		2																																																																																																																													19
TGACA		1																																																																																																																																1
TGAGA	1																																																																																																																																	1
TGAGC	1																																																																																																																																	1
TGATA	3																																																																																																																																	3
TGATC		2																																																																																																																																2
TGATG	1																																																																																																																																	1
TGATT	1																																																																																																																																	1
TGCAT		1	1																																																																																																																															2
TGGAG	1																																																																																																																																	1
TGGAT				1																																																																																																																														1
TGGGA	1																																																																																																																																	1
TGGGT	1																																																																																																																																	1
TGGTT	1																																																																																																																																	1
TGTAC	2																																																																																																																																	2
TGTAT	1																																																																																																																																	1
TGTCA	1																																																																																																																																	1
TGTCG	2																																																																																																																																	2
TGTCT	1																																																																																																																																	1
TGTGT	1																																																																																																																																	1
TGTTT	1	1																																																																																																																																2
TTAAA	5																																																																																																																																	5
TTAAT	15																																																																																																																																	15
TTAGT	1																																																																																																																																	1
TTATA	3																																																																																																																																	3
TTATT	18	1																																																																																																																																19
TTCAG	1																																																																																																																																	1
TTCAT	2																																																																																																																																	2
TTCCT	1																																																																																																																																	1
TTCTC	1																																																																																																																																	1
TTCTT	9	2	1																																																																																																																															12
TTGCA	1	1																																																																																																																																2
TTGCC	1																																																																																																																																	1
TTGGT	1																																																																																																																																	1
TTGTA	1																																																																																																																																	1
TTGTC	1																																																																																																																																	1
TTTAA	2																																																																																																																																	2
TTTAG	1																																																																																																																																	1
TTTAT	10	8	1			1																																																																																																																												20
TTTCA	1																																																																																																																																	1
TTTCC	5	2																																																																																																																																7
TTTCT	10	3		1																																																																																																																														14
TTTGA		1																																																																																																																																1
TTTGC	1																																																																																																																																	1
TTTGG	1																																																																																																																																	1
TTTGT	1																																																																																																																																	1
TTTTA	25	3	1	1																																																																																																																														30
TTTTC	49	16	4																																																																																																																															69
TTTTG	6	3		1																																																																																																																														10
AAAAAC	2																																																																																																																																	2
AAAAAG	7	2	1																																																																																																																															10
AAAAAT	16	5																																																																																																																																21
AAAACA	1																																																																																																																																	1
AAAAGA	7	1	4																																																																																																																															12
AAAAGG		1																																																																																																																																1
AAAAGT	1																																																																																																																																	1
AAAATA	7	1	1																																																																																																																															9
AAAATC	1																																																																																																																																	1
AAAATT	3																																																																																																																																	3
AAACAG	1																																																																																																																																	1
AAACCA	1																																																																																																																																	1
AAAGAA	3																																																																																																																																	3
AAAGAC	1																																																																																																																																	1
AAAGCA	1																																																																																																																																	1
AAAGCC	1																																																																																																																																	1
AAAGGA	2																																																																																																																																	2
AAAGGG	1																																																																																																																																	1
AAATAA	3																																																																																																																																	3
AAATGA	1																																																																																																																																	1
AAATTA	5																																																																																																																																	5
AACACA	1																																																																																																																																	1
AACACC		1																																																																																																																																1
AACAGG	1																																																																																																																																	1
AACCCG			1																																																																																																																															1
AAGAAA	3	2	1																																																																																																																															6
AAGAAC	1																																																																																																																																	1
AAGAGG	1		1																																																																																																																															2
AAGCCG		1																																																																																																																																1
AATAAA	3	1	1																																																																																																																															5
AATATT	5																																																																																																																																	5
AATGTA	1																																																																																																																																	1
AATTAA	1																																																																																																																																	1
AATTTA	1																																																																																																																																	1
ACAACC	1																																																																																																																																	1
ACAAGA	1																																																																																																																																	1
ACAGCA	1																																																																																																																																	1
ACCATC	1																																																																																																																																	1
ACCGCC	1																																																																																																																																	1
ACGACC	2																																																																																																																																	2
ACGATA	1																																																																																																																																	1
ACGATG	1																																																																																																																																	1
ACGGAG	1																																																																																																																																	1
ACGTCA	1																																																																																																																																	1
ACTACC		1																																																																																																																																1
ACTTTG	1																																																																																																																																	1
AGAAAA	1	1																																																																																																																																2
AGAAAC	1																																																																																																																																	1
AGAAAG	1																																																																																																																																	1
AGAAAT	1																																																																																																																																	1
AGACGT	1																																																																																																																																	1
AGAGAA	1																																																																																																																																	1
AGATAT	1																																																																																																																																	1
AGATCT	1																																																																																																																																	1
AGCATC	1																																																																																																																																	1
AGCCCG	1																																																																																																																																	1
AGCCGC	1																																																																																																																																	1
AGCGGG	1																																																																																																																																	1
AGCTCT	1																																																																																																																																	1
AGGAAA	1																																																																																																																																	1
AGGACA	1																																																																																																																																	1
AGGAGA	1																																																																																																																																	1
AGGCGG	1																																																																																																																																	1
AGGGTC	1																																																																																																																																	1
AGTACC	1																																																																																																																																	1
AGTAGA	1																																																																																																																																	1
AGTCCA	1																																																																																																																																	1
AGTGGT	2																																																																																																																																	2
AGTTGT	1																																																																																																																																	1
ATAAAA	2	1																																																																																																																																3
ATAAGA	1																																																																																																																																	1
ATAATG	1																																																																																																																																	1
ATAATT	2																																																																																																																																	2
ATAGTA	1																																																																																																																																	1
ATATAA	1																																																																																																																																	1
ATATAC	1																																																																																																																																	1
ATATCA		1																																																																																																																																1
ATATTA	5																																																																																																																																	5
ATCATA	1																																																																																																																																	1
ATCCTC	3																																																																																																																																	3
ATCGCC	1																																																																																																																																	1
ATGACC	1																																																																																																																																	1
ATGAGA	1																																																																																																																																	1
ATGATC	1																																																																																																																																	1
ATGATT	1																																																																																																																																	1
ATGCTG	1																																																																																																																																	1
ATTAAT	2																																																																																																																																	2
ATTCTC			1																																																																																																																															1
ATTGAC	1																																																																																																																																	1
ATTTTT	1																																																																																																																																	1
CAACAG	1	1																																																																																																																																2
CAAGAA	1																																																																																																																																	1
CAATAT	1																																																																																																																																	1
CACACC	1																																																																																																																																	1
CACATT	1																																																																																																																																	1
CACCAT	1																																																																																																																																	1
CACGGC	1																																																																																																																																	1
CACTCT	1																																																																																																																																	1
CAGAAA	1																																																																																																																																	1
CAGAAG	2																																																																																																																																	2
CAGCAA	4																																																																																																																																	4
CAGCAT	1																																																																																																																																	1
CAGCCG	1																																																																																																																																	1
CAGCTC	1																																																																																																																																	1
CAGCTT	1																																																																																																																																	1
CATACA	1																																																																																																																																	1
CATCCT	1																																																																																																																																	1
CATGAA	1																																																																																																																																	1
CATGGA	1																																																																																																																																	1
CCAACA	1																																																																																																																																	1
CCACAA	1																																																																																																																																	1
CCACCT	2																																																																																																																																	2
CCACTG	1																																																																																																																																	1
CCAGCT	1																																																																																																																																	1
CCAGGA		1																																																																																																																																1
CCATTC	1																																																																																																																																	1
CCCCAC	1																																																																																																																																	1
CCCCAG	1																																																																																																																																	1
CCCCCT	1																																																																																																																																	1
CCCTCT	1	1																																																																																																																																2
CCGAGA	1																																																																																																																																	1
CCGATG	1																																																																																																																																	1
CCGCCA	1																																																																																																																																	1
CCGCGC	1																																																																																																																																	1
CCGTGG	1																																																																																																																																	1
CCTCCG	1																																																																																																																																	1
CCTCTC	2																																																																																																																																	2
CCTGCG	1																																																																																																																																	1
CCTGCT	1																																																																																																																																	1
CCTGTC	1																																																																																																																																	1
CCTTGC	1																																																																																																																																	1
CCTTTT	1																																																																																																																																	1
CGAAGC	1																																																																																																																																	1
CGACCT	1																																																																																																																																	1
CGACTC	1																																																																																																																																	1
CGATCA	1																																																																																																																																	1
CGCACA	1																																																																																																																																	1
CGCAGC	1																																																																																																																																	1
CGCCAG	1																																																																																																																																	1
CGGAGC	1																																																																																																																																	1
CGGCAG	1																																																																																																																																	1
CGGCCA	1																																																																																																																																	1
CGGCTC	1																																																																																																																																	1
CGTCCT	1																																																																																																																																	1
CTACTG	1																																																																																																																																	1
CTATAC	1																																																																																																																																	1
CTCACT		1																																																																																																																																1
CTCATC	3																																																																																																																																	3
CTCCCG		1																																																																																																																																1
CTCGGG		1																																																																																																																																1
CTCTTC	1																																																																																																																																	1
CTGACG		1																																																																																																																																1
CTGCTA	1																																																																																																																																	1
CTGCTC	2																																																																																																																																	2
CTGGAG	1																																																																																																																																	1
CTGGGG	1	1																																																																																																																																2
CTGTGG	1																																																																																																																																	1
CTTCTC		1																																																																																																																																1
CTTTTC	1																																																																																																																																	1
CTTTTG	1																																																																																																																																	1
CTTTTT	3	3	1																																																																																																																															7
GAAAAA	6	1																																																																																																																																7
GAAAAT	1																																																																																																																																	1
GAAAGG	1																																																																																																																																	1
GAACAG	1																																																																																																																																	1
GAAGAG	1																																																																																																																																	1
GAAGGA	1																																																																																																																																	1
GAAGTG	1																																																																																																																																	1
GAATTA	1																																																																																																																																	1
GAATTG	1																																																																																																																																	1
GACAGC	1																																																																																																																																	1
GACATG	1																																																																																																																																	1
GACGAA	2																																																																																																																																	2
GACGAG	1																																																																																																																																	1
GACGCA	1																																																																																																																																	1
GACTGC	1																																																																																																																																	1
GAGAGC	1																																																																																																																																	1
GAGCCA	2																																																																																																																																	2
GAGCCC	1																																																																																																																																	1
GAGGAA	3																																																																																																																																	3
GAGGAC	1																																																																																																																																	1
GATAGG		1																																																																																																																																1
GATGAA		1																																																																																																																																1
GATGAC	1																																																																																																																																	1
GATGTT	1																																																																																																																																	1
GATTAT	1																																																																																																																																	1
GCAAAG	1																																																																																																																																	1
GCAGCG	1																																																																																																																																	1
GCAGGG	1																																																																																																																																	1
GCATTG	1																																																																																																																																	1
GCCACG	1																																																																																																																																	1
GCCATT	1																																																																																																																																	1
GCCGAT	1																																																																																																																																	1
GCCGCT		1																																																																																																																																1
GCCTCG	1																																																																																																																																	1
GCCTGA		1																																																																																																																																1
GCGATG	1																																																																																																																																	1
GCGATT	1																																																																																																																																	1
GCGCTC	2																																																																																																																																	2
GCGGCA	2																																																																																																																																	2
GCGGCT		1																																																																																																																																1
GCGTCA	1																																																																																																																																	1
GCTAGA	1																																																																																																																																	1
GCTGCA	2																																																																																																																																	2
GCTGCG	1																																																																																																																																	1
GCTGGA	1																																																																																																																																	1
GCTGGT		1																																																																																																																																1
GCTGTT		1																																																																																																																																1
GCTTCC	1																																																																																																																																	1
GCTTGG	1																																																																																																																																	1
GCTTTA	1																																																																																																																																	1
GCTTTT	1																																																																																																																																	1
GGAAAA							1																																																																																																																											1
GGACAG	1																																																																																																																																	1
GGACCT		1																																																																																																																																1
GGACGC	1																																																																																																																																	1
GGAGAA	1																																																																																																																																	1
GGAGAG	2	1																																																																																																																																3
GGAGCC	2																																																																																																																																	2
GGAGGG	1																																																																																																																																	1
GGATCG	1																																																																																																																																	1
GGATGG	1																																																																																																																																	1
GGCAAT	1																																																																																																																																	1
GGCGCC	1																																																																																																																																	1
GGCGTC		1																																																																																																																																1
GGCTCC	2																																																																																																																																	2
GGCTCG	1																																																																																																																																	1
GGCTCT	1																																																																																																																																	1
GGCTGC	1	1																																																																																																																																2
GGCTGG	1																																																																																																																																	1
GGCTTT	1																																																																																																																																	1
GGGAGA	1																																																																																																																																	1
GGGATC	1																																																																																																																																	1
GGGGAG	1																																																																																																																																	1
GGGGGA	2																																																																																																																																	2
GGGGTT	1																																																																																																																																	1
GGGTTG	1																																																																																																																																	1
GGTGAG	1																																																																																																																																	1
GGTGGC	1																																																																																																																																	1
GGTTAT	1																																																																																																																																	1
GTAGAG	1																																																																																																																																	1
GTAGTG	1																																																																																																																																	1
GTATAT	1																																																																																																																																	1
GTCAAG	1																																																																																																																																	1
GTCAAT	1																																																																																																																																	1
GTCACC	1																																																																																																																																	1
GTCATC	1																																																																																																																																	1
GTCCTT						1																																																																																																																												1
GTGGTA	1																																																																																																																																	1
GTGTAT	1																																																																																																																																	1
GTTACT	1																																																																																																																																	1
GTTGCA	1																																																																																																																																	1
GTTGGT	1	1																																																																																																																																2
GTTGTC	1																																																																																																																																	1
GTTTGG	1																																																																																																																																	1
TAAAAA	3	1																																																																																																																																4
TAAATC	1																																																																																																																																	1
TAATAT	1																																																																																																																																	1
TAATTA	1																																																																																																																																	1
TAATTG	1																																																																																																																																	1
TAATTT	2																																																																																																																																	2
TATAAT	4																																																																																																																																	4
TATCAC	1																																																																																																																																	1
TATCGC	1																																																																																																																																	1
TATCTT	1																																																																																																																																	1
TATGCA	1																																																																																																																																	1
TATTAA	5																																																																																																																																	5
TATTTC	2																																																																																																																																	2
TATTTT	1																																																																																																																																	1
TCACAC	1																																																																																																																																	1
TCACAT	1																																																																																																																																	1
TCACGA	1																																																																																																																																	1
TCAGGA	1																																																																																																																																	1
TCATCG	5																																																																																																																																	5
TCATTC	1																																																																																																																																	1
TCCAGT	1																																																																																																																																	1
TCCCTC	1																																																																																																																																	1
TCCGAC	1																																																																																																																																	1
TCCTCA	1																																																																																																																																	1
TCCTCG	1																																																																																																																																	1
TCCTCT	2																																																																																																																																	2
TCGCAG		1																																																																																																																																1
TCGCTA	1																																																																																																																																	1
TCGGGA	1																																																																																																																																	1
TCGGGG	1																																																																																																																																	1
TCGTCA	2																																																																																																																																	2
TCGTCT		1																																																																																																																																1
TCGTTG	1																																																																																																																																	1
TCTATA	1																																																																																																																																	1
TCTCGC	1																																																																																																																																	1
TCTCTT	1																																																																																																																																	1
TCTGAG	1																																																																																																																																	1
TCTGCA	1																																																																																																																																	1
TCTGGC	1																																																																																																																																	1
TCTTCA		1																																																																																																																																1
TCTTCC	2																																																																																																																																	2
TCTTCG	1																																																																																																																																	1
TCTTGG	1																																																																																																																																	1
TCTTGT	1																																																																																																																																	1
TCTTTC		1																																																																																																																																1
TCTTTT	6																																																																																																																																	6
TGAAAC		1																																																																																																																																1
TGAAGA	1																																																																																																																																	1
TGACGA			1																																																																																																																															1
TGAGCG	1																																																																																																																																	1
TGATGC	1																																																																																																																																	1
TGATGT	2																																																																																																																																	2
TGATTC	1																																																																																																																																	1
TGCCAC		1																																																																																																																																1
TGCCCT	1																																																																																																																																	1
TGCTGG	1																																																																																																																																	1
TGCTGT	1																																																																																																																																	1
TGGAGA	1																																																																																																																																	1
TGGAGC			1																																																																																																																															1
TGGCAT	1																																																																																																																																	1
TGGCTG		1																																																																																																																																1
TGGGCC	1																																																																																																																																	1
TGGGTG		1																																																																																																																																1
TGGGTT	1																																																																																																																																	1
TGGTCT	1																																																																																																																																	1
TGGTGT	1																																																																																																																																	1
TGTACA	1																																																																																																																																	1
TGTGAC	1																																																																																																																																	1
TGTGGT			1																																																																																																																															1
TGTTGC		1																																																																																																																																1
TTAAAA	1																																																																																																																																	1
TTAATA	9																																																																																																																																	9
TTATTT	1																																																																																																																																	1
TTCAGG	1																																																																																																																																	1
TTCGCC	1																																																																																																																																	1
TTCGGG	1																																																																																																																																	1
TTCTCA	2																																																																																																																																	2
TTCTCT	2																																																																																																																																	2
TTCTTG	1		1																																																																																																																															2
TTCTTT	4	1																																																																																																																																5
TTGGGA	2																																																																																																																																	2
TTGGGT		1																																																																																																																																1
TTGTCC	1																																																																																																																																	1
TTTAAT	1																																																																																																																																	1
TTTAGA	1																																																																																																																																	1
TTTATA	1																																																																																																																																	1
TTTATT	6																																																																																																																																	6
TTTCAA		1																																																																																																																																1
TTTCAC	1																																																																																																																																	1
TTTCAT		1																																																																																																																																1
TTTCCA		1																																																																																																																																1
TTTCCC	1																																																																																																																																	1
TTTCCG	1																																																																																																																																	1
TTTCCT			1																																																																																																																															1
TTTCTC	1																																																																																																																																	1
TTTCTT	6							1																																																																																																																										7
TTTGAT	1																																																																																																																																	1
TTTGGT	3																																																																																																																																	3
TTTGTT	1																																																																																																																																	1
TTTTAA	3																																																																																																																																	3
TTTTAC	1																																																																																																																																	1
TTTTAT	4	1																																																																																																																																5
TTTTCT	3																																																																																																																																	3
TTTTGT		1																																																																																																																																1
TTTTTA	15	1																																																																																																																																16
TTTTTC	14	4																																																																																																																																18

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	33	29	14	16	12	6	8	5	4	5	4	2	2	2	2	2	2	1	1	3					2	1	1			1	1			3				4														1	1								1			1																																1																	171
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2		1		1		1						1	1						1	1																																																																						1																					1	11
AC/GT	-	-	-	40	21	10	8	8	6	4	3	1	2	1	1	1										1		1	1	1		1		1	1																			1																																																																												114
AG/CT	-	-	-	100	47	28	17	20	12	8	6	4	6	2			2	1	1		1		1		1																																																																																																									257
AT/AT	-	-	-	176	67	35	22	13	9	7	3		1	1			1																																																																																																																	335
CG/CG	-	-	-	2																																																																																																																														2
AAC/GTT	-	-	28	10	7	2	2	1		1	1																																																																																																																							52
AAG/CTT	-	-	52	21	5	5	11	8	3	3			2	3		1		2	1		1		2	1	1	1										1																																																																																														124
AAT/ATT	-	-	59	27	12	7	5		2	2			1		1												1																																																																																																							117
ACC/GGT	-	-	19	6	2	3		1																																																																																																																										31
ACG/CGT	-	-	6	2							1																																																																																																																							9
ACT/AGT	-	-	13	6	3	1	1		2	1			1			1	1																																																																																																																	30
AGC/CTG	-	-	28	14	2	2	3		1																																																																																																																									50
AGG/CCT	-	-	13	6	3	3	2	1	1	1					1																																																																																																																			31
ATC/ATG	-	-	21	10	6	3	2	2																																																																																																																										44
CCG/CGG	-	-	18	6																																																																																																																														24
AAAC/GTTT	-	4																																																																																																																																4
AAAG/CTTT	-	64	17	9	4	4	4	1		2		1																																																																																																																						106
AAAT/ATTT	-	56	9	4	1	1		1																																																																																																																										72
AACC/GGTT	-	6	1																																																																																																																															7
AAGC/CTTG	-	2																																																																																																																																2
AAGG/CCTT	-	4																																																																																																																																4
AATC/ATTG	-	18	4	3	1																																																																																																																													26
AATG/ATTC	-	13	4																																																																																																																															17
AATT/AATT	-	14	6			1																																																																																																																												21
ACAG/CTGT	-	1	1																																																																																																																															2
ACAT/ATGT	-	33	14	5	2																																																																																																																													54
ACCG/CGGT	-	1																																																																																																																																1
ACCT/AGGT	-	2	1	1																																																																																																																														4
ACTC/AGTG	-	6	1	1																																																																																																																														8
ACTG/AGTC	-	2																																																																																																																																2
AGAT/ATCT	-	7		1	1																																																																																																																													9
AGCG/CGCT	-	2																																																																																																																																2
AGCT/AGCT	-	1																																																																																																																																1
AGGG/CCCT	-	3		1																																																																																																																														4
ATCC/ATGG	-	4																																																																																																																																4
ATGC/ATGC	-			1																																																																																																																														1
AAAAC/GTTTT	17	5		1																																																																																																																														23
AAAAG/CTTTT	194	46	16	4	2			1																																																																																																																										263
AAAAT/ATTTT	167	37	6	3		1		1																																																																																																																										215
AAACC/GGTTT	7																																																																																																																																	7
AAACG/CGTTT	1		1																																																																																																																															2
AAACT/AGTTT	6																																																																																																																																	6
AAAGC/CTTTG	9	1																																																																																																																																10
AAAGG/CCTTT	21	4	1																																																																																																																															26
AAAGT/ACTTT	2																																																																																																																																	2
AAATC/ATTTG	8	4																																																																																																																																12
AAATG/ATTTC	9		2																																																																																																																															11
AAATT/AATTT	50	1																																																																																																																																51
AACAC/GTGTT	4																																																																																																																																	4
AACCC/GGGTT	7																																																																																																																																	7
AACCG/CGGTT	4																																																																																																																																	4
AACCT/AGGTT	2	1	1																																																																																																																															4
AACGC/CGTTG	1																																																																																																																																	1
AACTC/AGTTG	1																																																																																																																																	1
AACTG/AGTTC	2																																																																																																																																	2
AAGAC/CTTGT	3																																																																																																																																	3
AAGAG/CTCTT	18	1	1																																																																																																																															20
AAGAT/ATCTT	2																																																																																																																																	2
AAGCC/CTTGG	2																																																																																																																																	2
AAGCG/CGCTT	1																																																																																																																																	1
AAGGC/CCTTG	1																																																																																																																																	1
AAGGG/CCCTT	8	1																																																																																																																																9
AAGGT/ACCTT	1																																																																																																																																	1
AAGTC/ACTTG	3																																																																																																																																	3
AAGTG/ACTTC	2																																																																																																																																	2
AATAC/ATTGT	5																																																																																																																																	5
AATAG/ATTCT	1	1																																																																																																																																2
AATAT/ATATT	30	1																																																																																																																																31
AATCC/ATTGG	3	2		1																																																																																																																														6
AATCG/ATTCG	2																																																																																																																																	2
AATCT/AGATT	2	1																																																																																																																																3
AATGC/ATTGC	5	2	1																																																																																																																															8
AATGG/ATTCC	1	1																																																																																																																																2
AATGT/ACATT		1																																																																																																																																1
AATTC/AATTG	7	1																																																																																																																																8
ACACC/GGTGT	3																																																																																																																																	3
ACACG/CGTGT	2	1																																																																																																																																3
ACACT/AGTGT	2																																																																																																																																	2
ACAGC/CTGTG	1																																																																																																																																	1
ACAGG/CCTGT	4																																																																																																																																	4
ACAGT/ACTGT	10																																																																																																																																	10
ACATC/ATGTG	2																																																																																																																																	2
ACATG/ATGTC	6	1																																																																																																																																7
ACCAG/CTGGT	1																																																																																																																																	1
ACCAT/ATGGT	6																																																																																																																																	6
ACCCC/GGGGT	4																																																																																																																																	4
ACCCG/CGGGT	1																																																																																																																																	1
ACCCT/AGGGT	1	1																																																																																																																																2
ACCGG/CCGGT	2																																																																																																																																	2
ACCGT/ACGGT	4																																																																																																																																	4
ACCTC/AGGTG	3																																																																																																																																	3
ACCTG/AGGTC	3																																																																																																																																	3
ACGAG/CGTCT	2	1																																																																																																																																3
ACGCC/CGTGG	2																																																																																																																																	2
ACGGC/CCGTG	1																																																																																																																																	1
ACGGG/CCCGT	1																																																																																																																																	1
ACTAG/AGTCT	3	1																																																																																																																																4
ACTAT/AGTAT	4	1																																																																																																																																5
ACTCC/AGTGG	1																																																																																																																																	1
ACTCG/AGTCG		1																																																																																																																																1
ACTCT/AGAGT	2																																																																																																																																	2
AGAGG/CCTCT	8	3																																																																																																																																11
AGATC/ATCTG	1	3																																																																																																																																4
AGATG/ATCTC	7	3																																																																																																																																10
AGCAT/ATGCT	1																																																																																																																																	1
AGCCC/CTGGG	2																																																																																																																																	2
AGCCG/CGGCT	1																																																																																																																																	1
AGCGG/CCGCT	1																																																																																																																																	1
AGCTC/AGCTG	4																																																																																																																																	4
AGGAT/ATCCT	4	1																																																																																																																																5
AGGCG/CCTCG	2																																																																																																																																	2
AGGGG/CCCCT	10																																																																																																																																	10
ATATC/ATATG	10																																																																																																																																	10
ATCCC/ATGGG	6	1																																																																																																																																7
CCGCG/CGCGG	1																																																																																																																																	1
AAAAAC/GTTTTT	4	1																																																																																																																																5
AAAAAG/CTTTTT	63	15	7					1																																																																																																																										86
AAAAAT/ATTTTT	62	11	2																																																																																																																															75
AAAACC/GGTTTT	4																																																																																																																																	4
AAAAGC/CTTTTG	3																																																																																																																																	3
AAAAGG/CCTTTT	5	1	1				1																																																																																																																											8
AAAAGT/ACTTTT	2																																																																																																																																	2
AAAATC/ATTTTG	2																																																																																																																																	2
AAAATG/ATTTTC	2	1																																																																																																																																3
AAAATT/AATTTT	16																																																																																																																																	16
AAACAC/GTGTTT	1																																																																																																																																	1
AAACAG/CTGTTT	3																																																																																																																																	3
AAACCC/GGGTTT	2	1																																																																																																																																3
AAACGG/CCGTTT	1																																																																																																																																	1
AAACTG/AGTTTC		1																																																																																																																																1
AAAGAC/CTTTGT	1																																																																																																																																	1
AAAGAG/CTCTTT	6	1																																																																																																																																7
AAAGAT/ATCTTT	1																																																																																																																																	1
AAAGCC/CTTTGG	2																																																																																																																																	2
AAAGCT/AGCTTT	1																																																																																																																																	1
AAAGGC/CCTTTG	1																																																																																																																																	1
AAAGGG/CCCTTT	3																																																																																																																																	3
AAAGTC/ACTTTG	1																																																																																																																																	1
AAAGTG/ACTTTC	1																																																																																																																																	1
AAATAG/ATTTCT	3																																																																																																																																	3
AAATAT/ATATTT	2																																																																																																																																	2
AAATCT/AGATTT	2																																																																																																																																	2
AAATGG/ATTTCC		1																																																																																																																																1
AAATGT/ACATTT	1																																																																																																																																	1
AAATTG/AATTTC		1																																																																																																																																1
AAATTT/AAATTT	1																																																																																																																																	1
AACAAG/CTTGTT	5		1																																																																																																																															6
AACACC/GGTGTT	3	2																																																																																																																																5
AACAGC/CTGTTG	7	3																																																																																																																																10
AACAGG/CCTGTT	2																																																																																																																																	2
AACAGT/ACTGTT	1																																																																																																																																	1
AACATC/ATGTTG	3																																																																																																																																	3
AACATG/ATGTTC	1																																																																																																																																	1
AACCAC/GGTTGT	2		1																																																																																																																															3
AACCAT/ATGGTT	1																																																																																																																																	1
AACCCC/GGGGTT	2																																																																																																																																	2
AACCCG/CGGGTT	1		1																																																																																																																															2
AACCTG/AGGTTC	1																																																																																																																																	1
AACGAC/CGTTGT	2																																																																																																																																	2
AACGAT/ATCGTT	1																																																																																																																																	1
AACGTC/ACGTTG	1																																																																																																																																	1
AACTAC/AGTTGT	1																																																																																																																																	1
AACTGC/AGTTGC	1																																																																																																																																	1
AACTGG/AGTTCC	1																																																																																																																																	1
AAGAAT/ATTCTT	1																																																																																																																																	1
AAGACC/CTTGGT	2																																																																																																																																	2
AAGACG/CGTCTT	3	1																																																																																																																																4
AAGAGG/CCTCTT	10		1																																																																																																																															11
AAGATG/ATCTTC	1	2																																																																																																																																3
AAGCAG/CTGCTT	2																																																																																																																																	2
AAGCCC/CTTGGG	1																																																																																																																																	1
AAGCCG/CGGCTT	1	1																																																																																																																																2
AAGCGG/CCGCTT	1																																																																																																																																	1
AAGCTG/AGCTTC	1																																																																																																																																	1
AAGGAC/CCTTGT	2					1																																																																																																																												3
AAGGAG/CCTTCT	3	1																																																																																																																																4
AAGGCG/CCTTCG	1																																																																																																																																	1
AAGGGC/CCCTTG	2																																																																																																																																	2
AAGGTC/ACCTTG	1																																																																																																																																	1
AAGTAG/ACTTCT	1																																																																																																																																	1
AAGTCC/ACTTGG	1																																																																																																																																	1
AAGTGG/ACTTCC	1																																																																																																																																	1
AATAGT/ACTATT	1																																																																																																																																	1
AATATC/ATATTG	1	1																																																																																																																																2
AATATT/AATATT	27																																																																																																																																	27
AATCAG/ATTCTG	1																																																																																																																																	1
AATCAT/ATGATT	3																																																																																																																																	3
AATCCC/ATTGGG	2																																																																																																																																	2
AATCGC/ATTGCG	1																																																																																																																																	1
AATGAG/ATTCTC	4		1																																																																																																																															5
AATGAT/ATCATT	1																																																																																																																																	1
AATGCC/ATTGGC	2																																																																																																																																	2
AATGGC/ATTGCC	2																																																																																																																																	2
AATGGG/ATTCCC	1																																																																																																																																	1
AATGTC/ACATTG	2																																																																																																																																	2
AATGTG/ACATTC	2																																																																																																																																	2
AATTAC/AATTGT	1																																																																																																																																	1
AATTAG/AATTCT	1																																																																																																																																	1
AATTAT/AATTAT	7																																																																																																																																	7
AATTCC/AATTGG	1																																																																																																																																	1
ACACAT/ATGTGT	2																																																																																																																																	2
ACACCC/GGGTGT	1	1																																																																																																																																2
ACACGC/CGTGTG	1																																																																																																																																	1
ACACTC/AGTGTG	1																																																																																																																																	1
ACAGCC/CTGTGG	1	1																																																																																																																																2
ACAGCG/CGCTGT	1																																																																																																																																	1
ACAGGG/CCCTGT	2																																																																																																																																	2
ACAGTC/ACTGTG	1																																																																																																																																	1
ACATAT/ATATGT	2																																																																																																																																	2
ACATGG/ATGTCC	2																																																																																																																																	2
ACATGT/ACATGT	1																																																																																																																																	1
ACCACG/CGTGGT	2																																																																																																																																	2
ACCACT/AGTGGT	4	1																																																																																																																																5
ACCAGC/CTGGTG	1	1																																																																																																																																2
ACCAGG/CCTGGT		1																																																																																																																																1
ACCAGT/ACTGGT	1																																																																																																																																	1
ACCATC/ATGGTG	2																																																																																																																																	2
ACCATG/ATGGTC	1																																																																																																																																	1
ACCCCC/GGGGGT	1																																																																																																																																	1
ACCCCG/CGGGGT	1																																																																																																																																	1
ACCCTC/AGGGTG	1																																																																																																																																	1
ACCCTG/AGGGTC	1																																																																																																																																	1
ACCGAG/CGGTCT	1																																																																																																																																	1
ACCGCC/CGGTGG	3																																																																																																																																	3
ACCGTC/ACGGTG	1																																																																																																																																	1
ACCTAT/AGGTAT	1																																																																																																																																	1
ACCTCC/AGGTGG	2																																																																																																																																	2
ACCTCG/AGGTCG	1																																																																																																																																	1
ACCTCT/AGAGGT	1																																																																																																																																	1
ACCTGG/AGGTCC		1																																																																																																																																1
ACGAGG/CCTCGT	4																																																																																																																																	4
ACGATC/ATCGTG	2																																																																																																																																	2
ACGATG/ATCGTC	10		1																																																																																																																															11
ACGCAG/CGTCTG	1																																																																																																																																	1
ACGCCG/CGGCGT		1																																																																																																																																1
ACGCGG/CCGCGT	1																																																																																																																																	1
ACGCTC/AGCGTG	1																																																																																																																																	1
ACGCTG/AGCGTC	1	1																																																																																																																																2
ACGGAG/CCGTCT	1																																																																																																																																	1
ACGGCC/CCGTGG	4																																																																																																																																	4
ACGTAG/ACGTCT	1																																																																																																																																	1
ACTATC/AGTGAT	1																																																																																																																																	1
ACTCAG/AGTCTG	1																																																																																																																																	1
ACTCCG/AGTCGG	2																																																																																																																																	2
ACTCTC/AGAGTG	1	1																																																																																																																																2
ACTGCC/AGTGGC	1	1																																																																																																																																2
ACTGCG/AGTCGC	1	1																																																																																																																																2
ACTGCT/AGCAGT	2																																																																																																																																	2
AGAGCC/CTCTGG	4																																																																																																																																	4
AGAGCG/CGCTCT	2																																																																																																																																	2
AGAGCT/AGCTCT	2																																																																																																																																	2
AGAGGG/CCCTCT	7	2																																																																																																																																9
AGATAT/ATATCT	2																																																																																																																																	2
AGATCT/AGATCT	1																																																																																																																																	1
AGATGC/ATCTGC	1																																																																																																																																	1
AGATGG/ATCTCC	1																																																																																																																																	1
AGCAGG/CCTGCT	3																																																																																																																																	3
AGCATC/ATGCTG	4																																																																																																																																	4
AGCCCC/CTGGGG	3	1																																																																																																																																4
AGCCCG/CGGGCT	3	1																																																																																																																																4
AGCCGC/CGGCTG	5	2																																																																																																																																7
AGCCGG/CCGGCT	6																																																																																																																																	6
AGCCTG/AGGCTC		1																																																																																																																																1
AGCGAT/ATCGCT	2																																																																																																																																	2
AGCGCC/CGCTGG	1																																																																																																																																	1
AGCGCG/CGCGCT	2																																																																																																																																	2
AGCGGC/CCGCTG	4	1																																																																																																																																5
AGCGGG/CCCGCT	1	1																																																																																																																																2
AGCTCC/AGCTGG	4		1																																																																																																																															5
AGCTGC/AGCTGC	2																																																																																																																																	2
AGGATC/ATCCTG	1																																																																																																																																	1
AGGATG/ATCCTC	8																																																																																																																																	8
AGGCCC/CCTGGG	1																																																																																																																																	1
AGGCCG/CCTCGG	1																																																																																																																																	1
AGGCGC/CCTGCG	1																																																																																																																																	1
AGGCGG/CCGCCT	2																																																																																																																																	2
AGGGAT/ATCCCT		1																																																																																																																																1
AGGGGC/CCCCTG	1																																																																																																																																	1
AGGGGG/CCCCCT	5																																																																																																																																	5
ATATGC/ATATGC	1																																																																																																																																	1
ATCATG/ATCATG	1																																																																																																																																	1
ATCCCC/ATGGGG	1																																																																																																																																	1
ATCCCG/ATCGGG	3																																																																																																																																	3
ATCGCC/ATGGCG	2																																																																																																																																	2
ATCGGC/ATGCCG	2																																																																																																																																	2
CCCGCG/CGCGGG	1																																																																																																																																	1
CCGGCG/CCGGCG	1																																																																																																																																	1
