Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-3/megassr/results/hub_GCA_011420415.1/fasta/hub_GCA_011420415.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              68
Total size of examined sequences (bp):           37562442
Total number of identified SSRs:                 3313
Number of SSR containing sequences:              61
Number of sequences containing more than 1 SSR:  58
Number of SSRs present in compound formation:    269


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	183
2	735
3	552
4	368
5	890
6	585

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	11	11	7	4	9	5	3	2	5	2			1		1		2	1			1							1	2	1			1				1		1																1				1																																																93
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1			2	1	1			1																																																																																																		6
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4				1	2	2		1									1																																																																									1																	12
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	11	9	13	3	5	1	2	3	1	1	1		1		1	1					1	2			1	1	1									1			1				1		1																																																													1	72
AC	-	-	-	5	3	3	1	4	2			1	1	1	2																																																																																																														23
AG	-	-	-	33	18	11	6	4	3	2		1	1		1			2				1							1																																																																																																84
AT	-	-	-	93	31	15	14	9	6	3	3	1		1																																																																																																															176
CA	-	-	-	11	2	1	2							1		1				1						1						1									1																																																																																				22
CG	-	-	-					1																																																																																																																					1
CT	-	-	-	16	4	7	3	2	2	2	1		5			1	1	1																																																																																																											45
GA	-	-	-	22	9	8	5	1	1	3		1	1																																																																																																																51
GC	-	-	-	2																																																																																																																									2
GT	-	-	-	12	7				2	1	1										2																																																																																																								25
TA	-	-	-	109	28	22	13	4	1	4	2		2		2																																																																																																														187
TC	-	-	-	29	16	16	10	4	1	1	1	1	1	2					1	1		1								1																																																																																															86
TG	-	-	-	8	6	6	1	2	2		1		2	1	1	2	1																																																																																																												33
AAC	-	-	4	2			1					1								1																																																																																																									9
AAG	-	-	11	5	2	1		3				1						1								1																																																																																																			25
AAT	-	-	20	5	7	1	1				1						1							1																																																																																																					37
ACA	-	-	2		2																																																																																																																								4
ACC	-	-	5	1																																																																																																																									6
ACG	-	-	1	1																																																																																																																									2
ACT	-	-	1							1																																																																																																																			2
AGA	-	-	10	2	2		1	1		1					1																																																																																																														18
AGC	-	-	3	1			1																																																																																																																						5
AGG	-	-	4	1																																																																																																																									5
AGT	-	-	4	1													1																																																																																																												6
ATA	-	-	6	9	4	2							1																																																																																																																22
ATC	-	-	1		1			1																																																																																																																					3
ATG	-	-	9	1																																																																																																																									10
ATT	-	-	8	4		2				1						1						1																																																																																																							17
CAA	-	-	2	3	2		1		1																																																																																																																				9
CAC	-	-	4	3																																																																																																																									7
CAG	-	-	4	4	2			1																																																																																																																					11
CAT	-	-	5	2		1							1																																																																																																																9
CCA	-	-	4																																																																																																																										4
CCG	-	-	3																																																																																																																										3
CCT	-	-		1					2																																																																																																																				3
CGA	-	-	4																																																																																																																										4
CGC	-	-	2	2																																																																																																																									4
CGG	-	-	1	1	1																																																																																																																								3
CTA	-	-	2							1																							1																																																																																												4
CTC	-	-	2			2	2																																																																																																																						6
CTG	-	-	5	1	1	1		1																																																																																																																					9
CTT	-	-	12	3	2	2		1			1																																																																																																																		21
GAA	-	-	9	4	2	1	1	2		1																																																																																																																			20
GAC	-	-	1		1	1																																																																																																																							3
GAG	-	-	6	1				1																																																																																																																					8
GAT	-	-	4											1																																																																																																															5
GCA	-	-	1	4		1																																																																																																																							6
GCC	-	-	4	1																																																																																																																									5
GCG	-	-	4		1																																																																																																																								5
GCT	-	-		4																																																																																																																									4
GGA	-	-	5		1	1	1																																																																																																																						8
GGC	-	-	9	2																																																																																																																									11
GGT	-	-	7																																																																																																																										7
GTA	-	-	2		1			1																																																																																																																					4
GTC	-	-	1																																																																																																																										1
GTG	-	-	1			1	1																																																																																																																						3
GTT	-	-	1	6		1						1																																																																																																																	9
TAA	-	-	11	2	2		1																																																																																																																						16
TAC	-	-		1	3			1												1												1																																																																																													7
TAG	-	-	3	1		2					1																									1		1																																																																																							9
TAT	-	-	14	4	3	1		2	2																																																																																																																				26
TCA	-	-	6	1	1				1																																																																																																																				9
TCC	-	-	1	1	1		1																																																																																																																						4
TCG	-	-	1		1																																																																																																																								2
TCT	-	-	8	3	1					1																																																																																																																			13
TGA	-	-	4	2	1					1																																																																																																																			8
TGC	-	-	6	2			2		1																																																																																																																				11
TGG	-	-	7	2	2	1																																																																																																																							12
TGT	-	-	3	3	2																																																																																																																								8
TTA	-	-	16	6	2	2																																																																																																																							26
TTC	-	-	11	6	4	1	2				1					1		1	1				1																																																																																																						29
TTG	-	-	3	1	1																																																																																																																								5
AAAG	-	12	10	3	4	1	1			1																																																																																																																			32
AAAT	-	10	4	2	1																																																																																																																								17
AAGA	-	5	2	2																																																																																																																									9
AAGG	-	1																																																																																																																											1
AATA	-	6				1																																																																																																																							7
AATC	-	1	1																																																																																																																										2
AATG	-	1																																																																																																																											1
AATT	-	8	1																																																																																																																										9
ACAG	-		1																																																																																																																										1
ACAT	-	2	2				1																																																																																																																						5
ACCA	-	1																																																																																																																											1
ACTA	-	1																																																																																																																											1
ACTC	-		1																																																																																																																										1
AGAA	-	6	1	1																																																																																																																									8
AGAC	-			1																																																																																																																									1
AGAT	-	1																																																																																																																											1
AGCA	-	1																																																																																																																											1
AGGA	-	1																																																																																																																											1
AGGG	-	1																																																																																																																											1
AGTG	-	1																																																																																																																											1
ATAA	-	10	2																																																																																																																										12
ATAC	-	4	1																																																																																																																										5
ATAG	-	2	1			1																																																																																																																							4
ATCA	-	2	1																																																																																																																										3
ATGG	-	1																																																																																																																											1
ATGT	-	2	2	3																																																																																																																									7
ATTA	-	2																																																																																																																											2
ATTC	-	1	1	1																																																																																																																									3
ATTG	-	1																																																																																																																											1
ATTT	-	11		1	1																																																																																																																								13
CAAT	-	2																																																																																																																											2
CACT	-	1																																																																																																																											1
CATA	-	1				1				1																																																																																																																			3
CATC	-	1																																																																																																																											1
CCTA	-	2																																																																																																																											2
CGCT	-	1																																																																																																																											1
CTAC	-	1		1																																																																																																																									2
CTAT	-	2	2																																																																																																																										4
CTCA	-	1																																																																																																																											1
CTCC	-	1																																																																																																																											1
CTGG	-	1																																																																																																																											1
CTTC	-	2																																																																																																																											2
CTTT	-	5	1	1																				1																																																																																																					8
GAAA	-	5		1																																																																																																																									6
GAAT	-	2																																																																																																																											2
GACT	-	1																																																																																																																											1
GATA	-	1																																																																																																																											1
GATG	-	1	1																																																																																																																										2
GATT	-	1			1																																																																																																																								2
GCTT	-	1																																																																																																																											1
GGAA	-		1																																																																																																																										1
GGAG	-	1																																																																																																																											1
GGAT	-	1																																																																																																																											1
GTAA	-	1																																																																																																																											1
GTAT	-	3	3																																																																																																																										6
GTCT	-		1																																																																																																																										1
GTGA	-	3																																																																																																																											3
TAAA	-	9	1																																																																																																																										10
TAAC	-	1																																																																																																																											1
TAAT	-	3																																																																																																																											3
TACA	-	5	2	1	1	1																																																																																																																							10
TACC	-		1																																																																																																																										1
TAGC	-	1																																																																																																																											1
TAGG	-				1																																																																																																																								1
TAGT	-	1																																																																																																																											1
TATG	-	4	1																																																																																																																										5
TATT	-	8																																																																																																																											8
TCAA	-	1																																																																																																																											1
TCAC	-	1																																																																																																																											1
TCAT	-	1		1																																																																																																																									2
TCCA	-	1																																																																																																																											1
TCCG	-		1																																																																																																																										1
TCGG	-	1																																																																																																																											1
TCTA	-	3	1																																																																																																																										4
TCTT	-	10	1		1																																																																																																																								12
TGAA	-	1																																																																																																																											1
TGAC	-	2																																																																																																																											2
TGAG	-	1																																																																																																																											1
TGAT	-	3																																																																																																																											3
TGCA	-	1																																																																																																																											1
TGTA	-	7	2	2																																																																																																																									11
TTAA	-	2		1																																																																																																																									3
TTAT	-	9	1	2																																																																																																																									12
TTCA	-	1																																																																																																																											1
TTCT	-	6	1			1																																																																																																																							8
TTGA	-	5	4	4																																																																																																																									13
TTGT	-	1																																																																																																																											1
TTTA	-	8	2																																																																																																																										10
TTTC	-	13	6	4	1	1	1																																																																																																																						26
TTTG	-	1																																																																																																																											1
AAAAC	5	2																																																																																																																											7
AAAAG	50	16	4	2	1																																																																																																																								73
AAAAT	30	6	2		1	1																																																																																																																							40
AAACA	1	1																																																																																																																											2
AAACC	1																																																																																																																												1
AAAGA	19	6	1																																																																																																																										26
AAAGG	4																																																																																																																												4
AAATA	8	2																																																																																																																											10
AAATC	3		2																																																																																																																										5
AAATG	1	1																																																																																																																											2
AAATT	9	1																																																																																																																											10
AACAA	1																																																																																																																												1
AACAC	2																																																																																																																												2
AACTA	2																																																																																																																												2
AAGAA	13	2	1																																																																																																																										16
AAGAC	1																																																																																																																												1
AAGGA	3																																																																																																																												3
AAGTA	1																																																																																																																												1
AAGTC	2																																																																																																																												2
AAGTG	1																																																																																																																												1
AATAA	10	1																																																																																																																											11
AATAT	5																																																																																																																												5
AATCA	1																																																																																																																												1
AATCC	1																																																																																																																												1
AATGA	3																																																																																																																												3
AATGG		1																																																																																																																											1
AATTA	4																																																																																																																												4
AATTC	1	1																																																																																																																											2
AATTT	2																																																																																																																												2
ACAAA	1																																																																																																																												1
ACAAC	1																																																																																																																												1
ACAGG	1																																																																																																																												1
ACAGT	1																																																																																																																												1
ACATG	2																																																																																																																												2
ACCAG	1																																																																																																																												1
ACCCA	1																																																																																																																												1
ACCGT	1																																																																																																																												1
ACGAA	1																																																																																																																												1
ACGCA	1																																																																																																																												1
ACTAG	1																																																																																																																												1
ACTAT	1																																																																																																																												1
ACTGT	1																																																																																																																												1
ACTTG	1																																																																																																																												1
AGAAA	14	2																																																																																																																											16
AGAAG	3																																																																																																																												3
AGACA	1																																																																																																																												1
AGACT		1																																																																																																																											1
AGAGA	3																																																																																																																												3
AGAGC	1																																																																																																																												1
AGATC		1																																																																																																																											1
AGATT	1																																																																																																																												1
AGCCG	1																																																																																																																												1
AGCTA	1																																																																																																																												1
AGGAA	2																																																																																																																												2
AGGAT	1																																																																																																																												1
AGGCG	1																																																																																																																												1
AGGGA	2																																																																																																																												2
AGTAC	2																																																																																																																												2
AGTGT		1																																																																																																																											1
ATAAA	13	1																																																																																																																											14
ATACC	2																																																																																																																												2
ATACT	1																																																																																																																												1
ATAGG	1																																																																																																																												1
ATATA	3																																																																																																																												3
ATATC	1																																																																																																																												1
ATATG	1																																																																																																																												1
ATATT	4																																																																																																																												4
ATCCC	2	1																																																																																																																											3
ATCCT	1																																																																																																																												1
ATCTC	1																																																																																																																												1
ATGAG	1																																																																																																																												1
ATGAT	2																																																																																																																												2
ATGCA		1																																																																																																																											1
ATGTA	1																																																																																																																												1
ATTAA	9																																																																																																																												9
ATTAT	1																																																																																																																												1
ATTCA	1																																																																																																																												1
ATTGC	1																																																																																																																												1
ATTTA	5																																																																																																																												5
ATTTC	1																																																																																																																												1
ATTTG	2																																																																																																																												2
ATTTT	10	3	1																																																																																																																										14
CAAAA	1																																																																																																																												1
CAAAG	1																																																																																																																												1
CAACA	1																																																																																																																												1
CAACC	1																																																																																																																												1
CAATG	1																																																																																																																												1
CAATT	1																																																																																																																												1
CACAT	1																																																																																																																												1
CACGG	1																																																																																																																												1
CAGAT		1																																																																																																																											1
CAGCC	1																																																																																																																												1
CAGGA	1																																																																																																																												1
CATAG	1																																																																																																																												1
CATCT	2		1																																																																																																																										3
CATTT	4																																																																																																																												4
CCAAA	1																																																																																																																												1
CCAAC	2																																																																																																																												2
CCAGT		1																																																																																																																											1
CCATA	1																																																																																																																												1
CCATT	1																																																																																																																												1
CCCAA	1																																																																																																																												1
CCCAT	2																																																																																																																												2
CCCCT	2																																																																																																																												2
CCCTC	1																																																																																																																												1
CCCTT	3																																																																																																																												3
CCGGT	1																																																																																																																												1
CCGTA	1																																																																																																																												1
CCTAA		1																																																																																																																											1
CCTCA	1																																																																																																																												1
CCTCC	1	1																																																																																																																											2
CCTCT	1																																																																																																																												1
CCTTC	3																																																																																																																												3
CCTTT	3																																																																																																																												3
CGAAC	1																																																																																																																												1
CGACA	1																																																																																																																												1
CGAGG		1																																																																																																																											1
CGATA	1																																																																																																																												1
CGGTA		1																																																																																																																											1
CGTCT	1																																																																																																																												1
CGTGT			1																																																																																																																										1
CTAAA	1																																																																																																																												1
CTATC	1																																																																																																																												1
CTCAA	1																																																																																																																												1
CTCAG	1																																																																																																																												1
CTCAT	1																																																																																																																												1
CTCCA	1																																																																																																																												1
CTCTT	2																																																																																																																												2
CTGCC	1																																																																																																																												1
CTGTC	1																																																																																																																												1
CTTCC		1																																																																																																																											1
CTTCT	4																																																																																																																												4
CTTGT		1																																																																																																																											1
CTTTC	3																																																																																																																												3
CTTTG	1																																																																																																																												1
CTTTT	16	6	1																																																																																																																										23
GAAAA	15	4																																																																																																																											19
GAAAC	1																																																																																																																												1
GAAAG	2																																																																																																																												2
GAAAT	1																																																																																																																												1
GAACC	2																																																																																																																												2
GAATA	1																																																																																																																												1
GAATT	1																																																																																																																												1
GACAA	1																																																																																																																												1
GACGG	1																																																																																																																												1
GACTA	1																																																																																																																												1
GAGAC	1	1																																																																																																																											2
GAGAG	1																																																																																																																												1
GAGAT	2	1																																																																																																																											3
GAGGA	1																																																																																																																												1
GAGGG	2																																																																																																																												2
GATAA	1																																																																																																																												1
GATGA	2																																																																																																																												2
GATGC	1																																																																																																																												1
GATGT	1																																																																																																																												1
GATTG	3																																																																																																																												3
GCAAA	1																																																																																																																												1
GCAAC	1																																																																																																																												1
GCCTC	1																																																																																																																												1
GCGTG	1																																																																																																																												1
GCTCA	1																																																																																																																												1
GGAAA	2																																																																																																																												2
GGAAG	1																																																																																																																												1
GGAAT	1																																																																																																																												1
GGAGA	2		1																																																																																																																										3
GGAGC	1																																																																																																																												1
GGCTC	1																																																																																																																												1
GGCTG	1																																																																																																																												1
GGGAT	1																																																																																																																												1
GGGGA	1																																																																																																																												1
GGGGT	1																																																																																																																												1
GGGTG	2																																																																																																																												2
GGGTT	1																																																																																																																												1
GGTAG		1																																																																																																																											1
GGTAT	1																																																																																																																												1
GGTCT		1																																																																																																																											1
GGTGT	1																																																																																																																												1
GGTTT	1																																																																																																																												1
GTATG	1																																																																																																																												1
GTATT	1																																																																																																																												1
GTCCC	1		1																																																																																																																										2
GTCGA		1																																																																																																																											1
GTCTA	2																																																																																																																												2
GTCTT	1																																																																																																																												1
GTGTA	1																																																																																																																												1
GTGTT	1																																																																																																																												1
GTTAG	1																																																																																																																												1
GTTGA	1																																																																																																																												1
GTTGG	2																																																																																																																												2
TAAAA	11	1																																																																																																																											12
TAAAC	1																																																																																																																												1
TAAAT	2																																																																																																																												2
TAACA	1																																																																																																																												1
TAACC	1																																																																																																																												1
TAATA	3																																																																																																																												3
TAATC	1																																																																																																																												1
TAATG				1																																																																																																																									1
TAATT	9																																																																																																																												9
TACCA	1																																																																																																																												1
TACCC	1																																																																																																																												1
TACGG	1																																																																																																																												1
TACTG	1																																																																																																																												1
TAGAA	1																																																																																																																												1
TAGTT	2																																																																																																																												2
TATAA	4																																																																																																																												4
TATAT	5																																																																																																																												5
TATCA	1																																																																																																																												1
TATGT	1																																																																																																																												1
TATTA	2																																																																																																																												2
TATTG	1																																																																																																																												1
TATTT	9					1																																																																																																																							10
TCACA	1																																																																																																																												1
TCAGC	2																																																																																																																												2
TCAGG	1																																																																																																																												1
TCATT	1		1																																																																																																																										2
TCCAA	1																																																																																																																												1
TCCCC	1																																																																																																																												1
TCCTA	1																																																																																																																												1
TCCTC	1																																																																																																																												1
TCGGG	1																																																																																																																												1
TCGTT		1																																																																																																																											1
TCTAC	1																																																																																																																												1
TCTAG	1																																																																																																																												1
TCTAT		1																																																																																																																											1
TCTCC	1																																																																																																																												1
TCTCT	1	1	1																																																																																																																										3
TCTTA	1																																																																																																																												1
TCTTC	2																																																																																																																												2
TCTTT	11	3																																																																																																																											14
TGAAA	2																																																																																																																												2
TGACA	1	1																																																																																																																											2
TGAGC	1																																																																																																																												1
TGATA	2																																																																																																																												2
TGATG	1																																																																																																																												1
TGCAT	1																																																																																																																												1
TGCTA	1																																																																																																																												1
TGCTG	1																																																																																																																												1
TGGCT	1																																																																																																																												1
TGTAC	5																																																																																																																												5
TGTAT	1																																																																																																																												1
TGTGG	1																																																																																																																												1
TTAAA	4																																																																																																																												4
TTAAT	13																																																																																																																												13
TTATA	3																																																																																																																												3
TTATT	11	2			1																																																																																																																								14
TTCAG	1																																																																																																																												1
TTCCC	2																																																																																																																												2
TTCCT	1																																																																																																																												1
TTCTC	1																																																																																																																												1
TTCTT	11	2																																																																																																																											13
TTGAA	1																																																																																																																												1
TTGAC	1																																																																																																																												1
TTGCA	1	1																																																																																																																											2
TTGCT		1																																																																																																																											1
TTGGG	1																																																																																																																												1
TTGGT	1																																																																																																																												1
TTGTA	1																																																																																																																												1
TTGTC	1																																																																																																																												1
TTTAA	8																																																																																																																												8
TTTAC	1																																																																																																																												1
TTTAT	16	3																																																																																																																											19
TTTCC	6																																																																																																																												6
TTTCT	17	3			1																																																																																																																								21
TTTGA	2																																																																																																																												2
TTTGT	1																																																																																																																												1
TTTTA	30	6	2	1																																																																																																																									39
TTTTC	42	16	3	1							1																																																																																																																		63
TTTTG	5																																																																																																																												5
AAAAAG	13	6	2																																																																																																																										21
AAAAAT	14	3	1																																																																																																																										18
AAAACA	2																																																																																																																												2
AAAAGA	7	2	1																																																																																																																										10
AAAAGC		1																																																																																																																											1
AAAAGG		1																																																																																																																											1
AAAATA	6																																																																																																																												6
AAAATG			1																																																																																																																										1
AAAATT	1																																																																																																																												1
AAACAG		1																																																																																																																											1
AAACTA	1																																																																																																																												1
AAAGAA	5	1																																																																																																																											6
AAAGCA	1																																																																																																																												1
AAAGGA	1																																																																																																																												1
AAAGGC	1																																																																																																																												1
AAAGGG		1																																																																																																																											1
AAAGGT	1																																																																																																																												1
AAATAA	5																																																																																																																												5
AAATCC	1																																																																																																																												1
AACACA	1																																																																																																																												1
AACACC	1																																																																																																																												1
AACGGA	1																																																																																																																												1
AAGAAA	5		1																																																																																																																										6
AAGAAC	1																																																																																																																												1
AAGAGG		1																																																																																																																											1
AAGATA	1																																																																																																																												1
AAGCCG		1																																																																																																																											1
AAGGGA	1																																																																																																																												1
AATAAA	1			1																																																																																																																									2
AATAAC	1																																																																																																																												1
AATCTA	1																																																																																																																												1
AATGAA	1																																																																																																																												1
AATTAA	3																																																																																																																												3
AATTTA	1																																																																																																																												1
AATTTT	1																																																																																																																												1
ACAACG	1																																																																																																																												1
ACAACT	1																																																																																																																												1
ACAATC	1																																																																																																																												1
ACAGCA	1																																																																																																																												1
ACCACT	1																																																																																																																												1
ACCATC	1																																																																																																																												1
ACCCAA	1																																																																																																																												1
ACCCCA	1																																																																																																																												1
ACCGCC	1																																																																																																																												1
ACGACC	1																																																																																																																												1
ACGATG	1																																																																																																																												1
ACGTCA	1																																																																																																																												1
ACTACC		1																																																																																																																											1
ACTTTG	1																																																																																																																												1
AGAAAA	4	2																																																																																																																											6
AGAAAG	1																																																																																																																												1
AGAGAA	2																																																																																																																												2
AGAGCC	1																																																																																																																												1
AGAGCG	1																																																																																																																												1
AGAGCT	1																																																																																																																												1
AGAGGC		1																																																																																																																											1
AGCCAT	1																																																																																																																												1
AGCGGG	1																																																																																																																												1
AGCTGC	1																																																																																																																												1
AGGACA	1																																																																																																																												1
AGGAGC	1																																																																																																																												1
AGGCAG	1																																																																																																																												1
AGGCGC	1																																																																																																																												1
AGGGCA	2																																																																																																																												2
AGGGTC	1																																																																																																																												1
AGGTGG		1																																																																																																																											1
AGTAGA		1																																																																																																																											1
AGTAGC	1																																																																																																																												1
AGTATC	1																																																																																																																												1
AGTATG	1																																																																																																																												1
AGTGAG	1																																																																																																																												1
ATAAAA	6	1																																																																																																																											7
ATAAAT	1																																																																																																																												1
ATAACT	1																																																																																																																												1
ATAATC	1																																																																																																																												1
ATAATT	1																																																																																																																												1
ATATTA	1																																																																																																																												1
ATCAAA			1																																																																																																																										1
ATCCCA	1																																																																																																																												1
ATCCCC	1																																																																																																																												1
ATCCTC	2																																																																																																																												2
ATCGTG	1																																																																																																																												1
ATCTTC	1																																																																																																																												1
ATGAAC	1																																																																																																																												1
ATGACC	1																																																																																																																												1
ATGACG	1																																																																																																																												1
ATGATT	1																																																																																																																												1
ATGGTA	1																																																																																																																												1
ATGTAC		1																																																																																																																											1
ATTAAT	4																																																																																																																												4
ATTATA	4																																																																																																																												4
ATTTAA	1	1																																																																																																																											2
ATTTTC	1																																																																																																																												1
CAACAC	1																																																																																																																												1
CAACAG	1																																																																																																																												1
CAACCC	1																																																																																																																												1
CAAGAA	2																																																																																																																												2
CACATA	1																																																																																																																												1
CACCAA	1																																																																																																																												1
CACTAC	1																																																																																																																												1
CACTGC	1																																																																																																																												1
CAGAAG	1																																																																																																																												1
CAGATC	1																																																																																																																												1
CAGCAA	1																																																																																																																												1
CAGCAT	1																																																																																																																												1
CAGCCA	1																																																																																																																												1
CAGCCC		1																																																																																																																											1
CAGGAA	1																																																																																																																												1
CAGGCA			1																																																																																																																										1
CAGGCT	2	1																																																																																																																											3
CAGTGG		1																																																																																																																											1
CATAAT	1																																																																																																																												1
CATCAC	1																																																																																																																												1
CATCGG	1																																																																																																																												1
CATGGA	1																																																																																																																												1
CATTTC		1																																																																																																																											1
CATTTT	1																																																																																																																												1
CCAAAC	2																																																																																																																												2
CCAAGA	1																																																																																																																												1
CCACAA	2																																																																																																																												2
CCATAA	1																																																																																																																												1
CCATTC	1																																																																																																																												1
CCCCAA	1																																																																																																																												1
CCCTCT	1	1																																																																																																																											2
CCGAAC	2																																																																																																																												2
CCGCCA	1																																																																																																																												1
CCGCCT	1																																																																																																																												1
CCGCGC	1																																																																																																																												1
CCGTGG	2																																																																																																																												2
CCTATC	1																																																																																																																												1
CCTCTC		1																																																																																																																											1
CCTCTT	1																																																																																																																												1
CCTGCA	1																																																																																																																												1
CCTTGT		1																																																																																																																											1
CGAAGC	1																																																																																																																												1
CGACCT	1																																																																																																																												1
CGAGGA	1																																																																																																																												1
CGATCC	1																																																																																																																												1
CGATGA				1																																																																																																																									1
CGCACA	1																																																																																																																												1
CGCAGC	1																																																																																																																												1
CGCCTC	1																																																																																																																												1
CGGAGC	1																																																																																																																												1
CGGCAG		1																																																																																																																											1
CGTCCT	1																																																																																																																												1
CGTCTC	1																																																																																																																												1
CGTGAT	1																																																																																																																												1
CTAATT	1																																																																																																																												1
CTACCA	1																																																																																																																												1
CTACTG	1																																																																																																																												1
CTATAC	2																																																																																																																												2
CTATCG		1																																																																																																																											1
CTATGA	1																																																																																																																												1
CTATTA	1																																																																																																																												1
CTATTT	1																																																																																																																												1
CTCATC	2																																																																																																																												2
CTCCCG	1																																																																																																																												1
CTCGTC	1																																																																																																																												1
CTCTCC	1																																																																																																																												1
CTCTTC	1																																																																																																																												1
CTCTTT		1																																																																																																																											1
CTGAGC	1																																																																																																																												1
CTGATG	1																																																																																																																												1
CTGCGA	1																																																																																																																												1
CTGGAG	1																																																																																																																												1
CTGGCT	1																																																																																																																												1
CTTCCT	1																																																																																																																												1
CTTCGT	1																																																																																																																												1
CTTCTA	1																																																																																																																												1
CTTCTC	1																																																																																																																												1
CTTTTT	4	1																																																																																																																											5
GAAAAA	2	1																																																																																																																											3
GAAAAG	1																																																																																																																												1
GAAAAT	1																																																																																																																												1
GAAAGG	1																																																																																																																												1
GAAATG	1																																																																																																																												1
GAAGAC	2																																																																																																																												2
GAAGAG	3																																																																																																																												3
GAAGTG	1																																																																																																																												1
GACAGG	1																																																																																																																												1
GACATG	1																																																																																																																												1
GACGAA	1																																																																																																																												1
GACGAG	1																																																																																																																												1
GACGAT	1																																																																																																																												1
GACGCA	1																																																																																																																												1
GACTAC	1																																																																																																																												1
GAGAAA		1																																																																																																																											1
GAGCAC	1																																																																																																																												1
GAGCAG	1																																																																																																																												1
GAGCCA	2																																																																																																																												2
GAGCCC	1	1																																																																																																																											2
GAGCCT		1																																																																																																																											1
GAGGAA	1																																																																																																																												1
GAGGAT	2	1																																																																																																																											3
GAGGTG	1																																																																																																																												1
GAGTCG	1																																																																																																																												1
GAGTGG	1																																																																																																																												1
GATATC	1																																																																																																																												1
GATATG		1																																																																																																																											1
GATGAC	1																																																																																																																												1
GATGAG	2																																																																																																																												2
GATGGC	1																																																																																																																												1
GATTGG	1																																																																																																																												1
GCAAAA		1																																																																																																																											1
GCAACA	1																																																																																																																												1
GCAACC	1																																																																																																																												1
GCACAT	1																																																																																																																												1
GCAGAA	1																																																																																																																												1
GCAGCC	1																																																																																																																												1
GCATCA	1																																																																																																																												1
GCCACC	1																																																																																																																												1
GCCATT	1																																																																																																																												1
GCCGAT	1																																																																																																																												1
GCCGCA	1																																																																																																																												1
GCGATG	1																																																																																																																												1
GCGATT	1																																																																																																																												1
GCGCAG		1																																																																																																																											1
GCGCTC	1																																																																																																																												1
GCGGCA		1																																																																																																																											1
GCGGCT		1																																																																																																																											1
GCGTCA	1																																																																																																																												1
GCTAGA		1																																																																																																																											1
GCTCCT		1																																																																																																																											1
GCTGAC	1																																																																																																																												1
GCTGCG	1																																																																																																																												1
GCTGGA	1																																																																																																																												1
GCTTCC	1																																																																																																																												1
GCTTTT	1																																																																																																																												1
GGAAAA	1																																																																																																																												1
GGAAGA	1																																																																																																																												1
GGACGC	1																																																																																																																												1
GGACTT	1																																																																																																																												1
GGAGAC	1																																																																																																																												1
GGAGCC	1																																																																																																																												1
GGAGGG	2																																																																																																																												2
GGAGTT	1																																																																																																																												1
GGATTG	1																																																																																																																												1
GGCACT	1																																																																																																																												1
GGCATT	1																																																																																																																												1
GGCGGA	1																																																																																																																												1
GGCGTG	1																																																																																																																												1
GGCTCC	1																																																																																																																												1
GGCTGC	2	1																																																																																																																											3
GGGACC		1																																																																																																																											1
GGGAGA	1																																																																																																																												1
GGGCCT	1																																																																																																																												1
GGTGAG	1																																																																																																																												1
GGTGTG		1																																																																																																																											1
GTAAAA	1																																																																																																																												1
GTAGCA	1																																																																																																																												1
GTCACC	1																																																																																																																												1
GTCGCA	1																																																																																																																												1
GTGGCA	1																																																																																																																												1
GTGGCC	1																																																																																																																												1
GTGGGG	1																																																																																																																												1
GTGGTT	2																																																																																																																												2
GTGTCT	1																																																																																																																												1
GTTCCT	1																																																																																																																												1
GTTCTT	1																																																																																																																												1
GTTGAA	1																																																																																																																												1
GTTGCA	1																																																																																																																												1
GTTGGC				1																																																																																																																									1
GTTGTC	1																																																																																																																												1
GTTTTG	1																																																																																																																												1
TAAAAA	2	1																																																																																																																											3
TAATAT	1																																																																																																																												1
TAATTA	1																																																																																																																												1
TAATTG	1																																																																																																																												1
TACACA	1																																																																																																																												1
TACATT		1																																																																																																																											1
TAGACA	1																																																																																																																												1
TAGTAA	1																																																																																																																												1
TATAAA	1																																																																																																																												1
TATAAT	1	1																																																																																																																											2
TATATG	1																																																																																																																												1
TATCTT	1																																																																																																																												1
TATGCA	1																																																																																																																												1
TATTAA	1																																																																																																																												1
TATTTA	1		1																																																																																																																										2
TATTTT	8	1																																																																																																																											9
TCAACA	1																																																																																																																												1
TCAATG	1																																																																																																																												1
TCACAT	1																																																																																																																												1
TCAGGA	1																																																																																																																												1
TCAGGT	1																																																																																																																												1
TCATCG	3																																																																																																																												3
TCATTC	1																																																																																																																												1
TCATTT	2																																																																																																																												2
TCCAAG	1																																																																																																																												1
TCCAAT	1																																																																																																																												1
TCCAGC	1	1																																																																																																																											2
TCCCTC	2																																																																																																																												2
TCCCTG	1																																																																																																																												1
TCCTCA		2																																																																																																																											2
TCGCTA	1																																																																																																																												1
TCGCTG	1																																																																																																																												1
TCGGGA	1																																																																																																																												1
TCGGTC	1																																																																																																																												1
TCGTCA	1																																																																																																																												1
TCTACG		1																																																																																																																											1
TCTGAG	1																																																																																																																												1
TCTGCA	1																																																																																																																												1
TCTGCT	1																																																																																																																												1
TCTTCA		1																																																																																																																											1
TCTTCC	2																																																																																																																												2
TCTTGT	1																																																																																																																												1
TCTTTC	1						1																																																																																																																						2
TCTTTG	1																																																																																																																												1
TCTTTT	4			1																																																																																																																									5
TGAAAC	1																																																																																																																												1
TGAAGA		1																																																																																																																											1
TGAATG	1																																																																																																																												1
TGACGA	1																																																																																																																												1
TGAGAA	1																																																																																																																												1
TGAGCG	1																																																																																																																												1
TGAGGA	1																																																																																																																												1
TGAGGC	1																																																																																																																												1
TGATGC	1																																																																																																																												1
TGATGT	1																																																																																																																												1
TGATTA	1																																																																																																																												1
TGCTGG	2																																																																																																																												2
TGCTGT	1		1																																																																																																																										2
TGCTTT	1																																																																																																																												1
TGGCTA	1																																																																																																																												1
TGGGTT	1																																																																																																																												1
TGGTAG	1																																																																																																																												1
TGGTGA	1																																																																																																																												1
TGTACA	1																																																																																																																												1
TGTAGT		1																																																																																																																											1
TGTATA	1																																																																																																																												1
TGTCTT	1																																																																																																																												1
TGTGAC	1																																																																																																																												1
TGTGTA	1																																																																																																																												1
TGTTTT	1																																																																																																																												1
TTAAAA	1																																																																																																																												1
TTAATA	6																																																																																																																												6
TTAATT	1																																																																																																																												1
TTACTA	1																																																																																																																												1
TTATTT	6																																																																																																																												6
TTCAAC	1																																																																																																																												1
TTCCTT	1																																																																																																																												1
TTCGCC	1																																																																																																																												1
TTCTCA	1																																																																																																																												1
TTCTTA	1																																																																																																																												1
TTCTTT	3	2																																																																																																																											5
TTGAGG	1																																																																																																																												1
TTGCCA		1																																																																																																																											1
TTGGGG	1																																																																																																																												1
TTTAAT	2																																																																																																																												2
TTTAGA	1																																																																																																																												1
TTTATT	9																																																																																																																												9
TTTCAA	1																																																																																																																												1
TTTCAC	1																																																																																																																												1
TTTCAT	1																																																																																																																												1
TTTCCT	1																																																																																																																												1
TTTCTA	1																																																																																																																												1
TTTCTC	2																																																																																																																												2
TTTCTT	9	1																																																																																																																											10
TTTGTT	1																																																																																																																												1
TTTTAT	5	3	1																																																																																																																										9
TTTTCA	1																																																																																																																												1
TTTTCC	1																																																																																																																												1
TTTTCT	10	1	1																																																																																																																										12
TTTTGG	1																																																																																																																												1
TTTTGT		1																																																																																																																											1
TTTTTA	7	4																																																																																																																											11
TTTTTC	10	3																																																																																																																											13

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	27	22	20	20	7	14	6	5	5	6	3	1		2		2	1	2	1			2	2			1	1	1	1	2	1			1			1	1		2				1		1										1				1																																															1	165
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4	1			3	3	3		1	1								1																																																																									1																	18
AC/GT	-	-	-	36	18	10	4	6	6	1	2	1	3	3	3	3	1			1	2					1						1									1																																																																																				103
AG/CT	-	-	-	100	47	42	24	11	7	8	2	3	8	2	1	1	1	3	1	1		2							1	1																																																																																															266
AT/AT	-	-	-	202	59	37	27	13	7	7	5	1	2	1	2																																																																																																														363
CG/CG	-	-	-	2				1																																																																																																																					3
AAC/GTT	-	-	15	15	7	1	2		1			2								1																																																																																																									44
AAG/CTT	-	-	61	23	13	5	4	7		3	2	1			1	1		2	1				1			1																																																																																																			126
AAT/ATT	-	-	75	30	18	8	2	2	2	1	1		1			1	1					1		1																																																																																																					144
ACC/GGT	-	-	28	6	2	2	1																																																																																																																						39
ACG/CGT	-	-	8	1	2	1																																																																																																																							12
ACT/AGT	-	-	12	3	4	2		2		2	1						1			1												1	1			1		1																																																																																							32
AGC/CTG	-	-	19	16	3	2	3	2	1																																																																																																																				46
AGG/CCT	-	-	18	4	2	3	4	1	2																																																																																																																				34
ATC/ATG	-	-	29	6	3	1		1	1	1			1	1																																																																																																															44
CCG/CGG	-	-	23	6	2																																																																																																																								31
AAAC/GTTT	-	2																																																																																																																											2
AAAG/CTTT	-	62	22	12	6	3	2			1														1																																																																																																					109
AAAT/ATTT	-	71	10	5	2	1																																																																																																																							89
AACC/GGTT	-	1																																																																																																																											1
AACT/AGTT	-	3																																																																																																																											3
AAGC/CTTG	-	2																																																																																																																											2
AAGG/CCTT	-	4	1																																																																																																																										5
AAGT/ACTT	-	1																																																																																																																											1
AATC/ATTG	-	16	6	4	1																																																																																																																								27
AATG/ATTC	-	7	1	2																																																																																																																									10
AATT/AATT	-	15	1	1																																																																																																																									17
ACAG/CTGT	-		2	1																																																																																																																									3
ACAT/ATGT	-	28	13	6	1	2	1			1																																																																																																																			52
ACCG/CGGT	-	1																																																																																																																											1
ACCT/AGGT	-	3	1	1	1																																																																																																																								6
ACGG/CCGT	-		1																																																																																																																										1
ACTC/AGTG	-	8	1																																																																																																																										9
ACTG/AGTC	-	3																																																																																																																											3
AGAT/ATCT	-	9	4			1																																																																																																																							14
AGCC/CTGG	-	1																																																																																																																											1
AGCG/CGCT	-	1																																																																																																																											1
AGCT/AGCT	-	1																																																																																																																											1
AGGG/CCCT	-	3																																																																																																																											3
ATCC/ATGG	-	5	1																																																																																																																										6
ATGC/ATGC	-	1																																																																																																																											1
AAAAC/GTTTT	15	3																																																																																																																											18
AAAAG/CTTTT	208	60	10	3	2						1																																																																																																																		284
AAAAT/ATTTT	148	25	5	1	2	2																																																																																																																							183
AAACC/GGTTT	4																																																																																																																												4
AAACG/CGTTT	2	1																																																																																																																											3
AAACT/AGTTT	6																																																																																																																												6
AAAGC/CTTTG	3	1																																																																																																																											4
AAAGG/CCTTT	26																																																																																																																												26
AAAGT/ACTTT	2																																																																																																																												2
AAATC/ATTTG	8		2																																																																																																																										10
AAATG/ATTTC	13	1	1																																																																																																																										15
AAATT/AATTT	65	1																																																																																																																											66
AACAC/GTGTT	5																																																																																																																												5
AACAT/ATGTT	2																																																																																																																												2
AACCC/GGGTT	9																																																																																																																												9
AACCG/CGGTT	3																																																																																																																												3
AACCT/AGGTT	2	1																																																																																																																											3
AACGC/CGTTG	2																																																																																																																												2
AACTC/AGTTG	2																																																																																																																												2
AACTG/AGTTC	1																																																																																																																												1
AAGAC/CTTGT	5	1																																																																																																																											6
AAGAG/CTCTT	16	1	1																																																																																																																										18
AAGAT/ATCTT	2																																																																																																																												2
AAGCC/CTTGG	1																																																																																																																												1
AAGCT/AGCTT	1																																																																																																																												1
AAGGG/CCCTT	11	1																																																																																																																											12
AAGTC/ACTTG	4																																																																																																																												4
AAGTG/ACTTC	1																																																																																																																												1
AATAC/ATTGT	4																																																																																																																												4
AATAG/ATTCT	2	1																																																																																																																											3
AATAT/ATATT	30																																																																																																																												30
AATCC/ATTGG	5																																																																																																																												5
AATCT/AGATT	2																																																																																																																												2
AATGC/ATTGC	4	2																																																																																																																											6
AATGG/ATTCC	2	1																																																																																																																											3
AATGT/ACATT	1			1																																																																																																																									2
AATTC/AATTG	5	1																																																																																																																											6
ACACC/GGTGT	2																																																																																																																												2
ACACG/CGTGT	1		1																																																																																																																										2
ACACT/AGTGT	1	1																																																																																																																											2
ACAGC/CTGTG	1																																																																																																																												1
ACAGG/CCTGT	3																																																																																																																												3
ACAGT/ACTGT	10																																																																																																																												10
ACATC/ATGTG	4																																																																																																																												4
ACATG/ATGTC	3	1																																																																																																																											4
ACCAG/CTGGT	1	1																																																																																																																											2
ACCAT/ATGGT	6																																																																																																																												6
ACCCC/GGGGT	3																																																																																																																												3
ACCCG/CGGGT	1																																																																																																																												1
ACCCT/AGGGT	1	1																																																																																																																											2
ACCGG/CCGGT	1																																																																																																																												1
ACCGT/ACGGT	3	1																																																																																																																											4
ACCTC/AGGTG	1																																																																																																																												1
ACCTG/AGGTC	1																																																																																																																												1
ACGAG/CGTCT	2	1																																																																																																																											3
ACGAT/ATCGT	1																																																																																																																												1
ACGCC/CGTGG	1																																																																																																																												1
ACGGC/CCGTG	1																																																																																																																												1
ACGGG/CCCGT	2		1																																																																																																																										3
ACTAG/AGTCT	5	1																																																																																																																											6
ACTAT/AGTAT	2																																																																																																																												2
ACTCC/AGTGG	1																																																																																																																												1
ACTCG/AGTCG		1																																																																																																																											1
ACTCT/AGAGT	1																																																																																																																												1
ACTGG/AGTCC		1																																																																																																																											1
AGAGC/CTCTG	1																																																																																																																												1
AGAGG/CCTCT	7		1																																																																																																																										8
AGATC/ATCTG		2																																																																																																																											2
AGATG/ATCTC	9	1	1																																																																																																																										11
AGCAT/ATGCT	2																																																																																																																												2
AGCCC/CTGGG	2																																																																																																																												2
AGCCG/CGGCT	2																																																																																																																												2
AGCGG/CCGCT	1																																																																																																																												1
AGCTC/AGCTG	5																																																																																																																												5
AGGAT/ATCCT	5																																																																																																																												5
AGGCG/CCTCG	2	1																																																																																																																											3
AGGGC/CCCTG	1																																																																																																																												1
AGGGG/CCCCT	8	1																																																																																																																											9
ATATC/ATATG	7																																																																																																																												7
ATCCC/ATGGG	5	1																																																																																																																											6
ATCGC/ATGCG	1																																																																																																																												1
AAAAAC/GTTTTT	4	1																																																																																																																											5
AAAAAG/CTTTTT	76	20	5	1																																																																																																																									102
AAAAAT/ATTTTT	69	13	2	1																																																																																																																									85
AAAACC/GGTTTT	2																																																																																																																												2
AAAACT/AGTTTT	1																																																																																																																												1
AAAAGC/CTTTTG	3	2																																																																																																																											5
AAAAGG/CCTTTT	6	1																																																																																																																											7
AAAAGT/ACTTTT	1																																																																																																																												1
AAAATC/ATTTTG			1																																																																																																																										1
AAAATG/ATTTTC	8		1																																																																																																																										9
AAAATT/AATTTT	9																																																																																																																												9
AAACAC/GTGTTT	1																																																																																																																												1
AAACAG/CTGTTT		1																																																																																																																											1
AAACCC/GGGTTT	4																																																																																																																												4
AAACGG/CCGTTT	1																																																																																																																												1
AAACTG/AGTTTC	1																																																																																																																												1
AAAGAC/CTTTGT	2																																																																																																																												2
AAAGAG/CTCTTT	6	2					1																																																																																																																						9
AAAGAT/ATCTTT	2																																																																																																																												2
AAAGGC/CCTTTG	1																																																																																																																												1
AAAGGG/CCCTTT	2	1																																																																																																																											3
AAAGGT/ACCTTT	1																																																																																																																												1
AAAGTC/ACTTTG	1																																																																																																																												1
AAAGTG/ACTTTC	1																																																																																																																												1
AAATAG/ATTTCT	2																																																																																																																												2
AAATAT/ATATTT	3		1																																																																																																																										4
AAATCC/ATTTGG	1																																																																																																																												1
AAATCT/AGATTT	2																																																																																																																												2
AAATGG/ATTTCC	1	1																																																																																																																											2
AAATGT/ACATTT		1																																																																																																																											1
AAATTG/AATTTC	1																																																																																																																												1
AAATTT/AAATTT	2	1																																																																																																																											3
AACAAG/CTTGTT	5																																																																																																																												5
AACAAT/ATTGTT	1																																																																																																																												1
AACACC/GGTGTT	3																																																																																																																												3
AACAGC/CTGTTG	5		1																																																																																																																										6
AACAGG/CCTGTT	2																																																																																																																												2
AACATC/ATGTTG	2																																																																																																																												2
AACATG/ATGTTC	1																																																																																																																												1
AACCAC/GGTTGT	4																																																																																																																												4
AACCAT/ATGGTT	1																																																																																																																												1
AACCCC/GGGGTT	4																																																																																																																												4
AACCCG/CGGGTT	2																																																																																																																												2
AACCGC/CGGTTG	1																																																																																																																												1
AACCTC/AGGTTG	1																																																																																																																												1
AACCTG/AGGTTC	1																																																																																																																												1
AACGAC/CGTTGT	2																																																																																																																												2
AACGCC/CGTTGG				1																																																																																																																									1
AACGTC/ACGTTG	1																																																																																																																												1
AACTAC/AGTTGT	1	1																																																																																																																											2
AACTAT/AGTTAT	1																																																																																																																												1
AACTCC/AGTTGG	1																																																																																																																												1
AACTGC/AGTTGC	1																																																																																																																												1
AACTTC/AAGTTG	2																																																																																																																												2
AAGAAT/ATTCTT	1																																																																																																																												1
AAGACC/CTTGGT	1																																																																																																																												1
AAGACG/CGTCTT	4																																																																																																																												4
AAGAGG/CCTCTT	10	1																																																																																																																											11
AAGATG/ATCTTC	1	2																																																																																																																											3
AAGCAG/CTGCTT	3																																																																																																																												3
AAGCCG/CGGCTT	1	1																																																																																																																											2
AAGCGG/CCGCTT	1																																																																																																																												1
AAGGAC/CCTTGT	1	1																																																																																																																											2
AAGGAG/CCTTCT	1																																																																																																																												1
AAGGCG/CCTTCG	1																																																																																																																												1
AAGGGC/CCCTTG	2																																																																																																																												2
AAGTAG/ACTTCT	1	1																																																																																																																											2
AAGTCC/ACTTGG	2																																																																																																																												2
AAGTGG/ACTTCC	1																																																																																																																												1
AATAGT/ACTATT	3																																																																																																																												3
AATATT/AATATT	13																																																																																																																												13
AATCAC/ATTGTG	1																																																																																																																												1
AATCAT/ATGATT	4																																																																																																																												4
AATCCC/ATTGGG	3																																																																																																																												3
AATCGC/ATTGCG	1																																																																																																																												1
AATGAG/ATTCTC	3																																																																																																																												3
AATGCC/ATTGGC	1																																																																																																																												1
AATGGC/ATTGCC	1	1																																																																																																																											2
AATGGG/ATTCCC	1																																																																																																																												1
AATGGT/ACCATT	1																																																																																																																												1
AATGTC/ACATTG	1																																																																																																																												1
AATGTG/ACATTC	2																																																																																																																												2
AATTAC/AATTGT	1																																																																																																																												1
AATTAG/AATTCT	1																																																																																																																												1
AATTAT/AATTAT	7	1																																																																																																																											8
AATTCC/AATTGG	1																																																																																																																												1
ACACAG/CTGTGT	1																																																																																																																												1
ACACAT/ATGTGT	3																																																																																																																												3
ACACCC/GGGTGT		1																																																																																																																											1
ACACGC/CGTGTG	1																																																																																																																												1
ACAGCC/CTGTGG	1																																																																																																																												1
ACAGCG/CGCTGT	1																																																																																																																												1
ACAGGC/CCTGTG			1																																																																																																																										1
ACAGGG/CCCTGT	2																																																																																																																												2
ACAGTC/ACTGTG	1																																																																																																																												1
ACATAG/ATGTCT	1																																																																																																																												1
ACATAT/ATATGT	2																																																																																																																												2
ACATGC/ATGTGC	1																																																																																																																												1
ACATGG/ATGTCC	2																																																																																																																												2
ACATGT/ACATGT	1	1																																																																																																																											2
ACCACG/CGTGGT	1																																																																																																																												1
ACCACT/AGTGGT	4	1																																																																																																																											5
ACCAGC/CTGGTG	2																																																																																																																												2
ACCATC/ATGGTG	3																																																																																																																												3
ACCATG/ATGGTC	1																																																																																																																												1
ACCCCC/GGGGGT	1																																																																																																																												1
ACCCTC/AGGGTG	1																																																																																																																												1
ACCCTG/AGGGTC	1																																																																																																																												1
ACCGAG/CGGTCT	1																																																																																																																												1
ACCGCC/CGGTGG	3																																																																																																																												3
ACCGGG/CCCGGT		1																																																																																																																											1
ACCGTC/ACGGTG	1																																																																																																																												1
ACCTAT/AGGTAT	2																																																																																																																												2
ACCTCC/AGGTGG	1	1																																																																																																																											2
ACCTCG/AGGTCG	1																																																																																																																												1
ACCTGC/AGGTGC	1																																																																																																																												1
ACGACT/AGTCGT	1																																																																																																																												1
ACGAGC/CGTGCT	1																																																																																																																												1
ACGAGG/CCTCGT	4																																																																																																																												4
ACGATC/ATCGTG	2																																																																																																																												2
ACGATG/ATCGTC	9			1																																																																																																																									10
ACGCAG/CGTCTG	1																																																																																																																												1
ACGCCC/CGTGGG	1																																																																																																																												1
ACGCGG/CCGCGT	1																																																																																																																												1
ACGCTC/AGCGTG	1																																																																																																																												1
ACGCTG/AGCGTC	2																																																																																																																												2
ACGGAG/CCGTCT	2																																																																																																																												2
ACGGCC/CCGTGG	3																																																																																																																												3
ACGTAG/ACGTCT		1																																																																																																																											1
ACTATG/AGTCAT	1																																																																																																																												1
ACTCAG/AGTCTG	1																																																																																																																												1
ACTCAT/AGTATG	1																																																																																																																												1
ACTCCC/AGTGGG	1																																																																																																																												1
ACTCCG/AGTCGG	1																																																																																																																												1
ACTCTC/AGAGTG	1																																																																																																																												1
ACTGAT/AGTATC	1																																																																																																																												1
ACTGCC/AGTGGC	2	1																																																																																																																											3
ACTGCG/AGTCGC	2																																																																																																																												2
ACTGCT/AGCAGT	3																																																																																																																												3
ACTGGC/AGTGCC	1																																																																																																																												1
AGAGCC/CTCTGG	4																																																																																																																												4
AGAGCG/CGCTCT	1																																																																																																																												1
AGAGCT/AGCTCT	1	1																																																																																																																											2
AGAGGC/CCTCTG	1	1																																																																																																																											2
AGAGGG/CCCTCT	5	2																																																																																																																											7
AGATCC/ATCTGG	1																																																																																																																												1
AGATGC/ATCTGC	1																																																																																																																												1
AGCAGG/CCTGCT	2	1																																																																																																																											3
AGCATC/ATGCTG	4																																																																																																																												4
AGCCAT/ATGGCT	2																																																																																																																												2
AGCCCC/CTGGGG		1																																																																																																																											1
AGCCCG/CGGGCT	1	1																																																																																																																											2
AGCCGC/CGGCTG	6	2																																																																																																																											8
AGCCGG/CCGGCT	3																																																																																																																												3
AGCCTC/AGGCTG	1																																																																																																																												1
AGCCTG/AGGCTC	3	2																																																																																																																											5
AGCGAT/ATCGCT	1	1																																																																																																																											2
AGCGCG/CGCGCT	1																																																																																																																												1
AGCGGC/CCGCTG		2																																																																																																																											2
AGCGGG/CCCGCT	2																																																																																																																												2
AGCTCC/AGCTGG	3	1																																																																																																																											4
AGCTGC/AGCTGC	1																																																																																																																												1
AGGATC/ATCCTG	1																																																																																																																												1
AGGATG/ATCCTC	9	3																																																																																																																											12
AGGCCC/CCTGGG	1																																																																																																																												1
AGGCGC/CCTGCG	1	1																																																																																																																											2
AGGCGG/CCGCCT	3																																																																																																																												3
AGGGAT/ATCCCT	1																																																																																																																												1
AGGGGG/CCCCCT	2																																																																																																																												2
ATATCC/ATATGG		1																																																																																																																											1
ATATCG/ATATCG	1																																																																																																																												1
ATATGC/ATATGC	1																																																																																																																												1
ATCCCC/ATGGGG	1																																																																																																																												1
ATCCCG/ATCGGG	2																																																																																																																												2
ATCGCC/ATGGCG	2																																																																																																																												2
ATCGGC/ATGCCG	2																																																																																																																												2
CCCGCG/CGCGGG	1																																																																																																																												1
