Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-2/megassr/results/hub_GCA_011420405.1/fasta/hub_GCA_011420405.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              76
Total size of examined sequences (bp):           37570480
Total number of identified SSRs:                 3352
Number of SSR containing sequences:              61
Number of sequences containing more than 1 SSR:  56
Number of SSRs present in compound formation:    285


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	179
2	740
3	551
4	382
5	885
6	615

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	12	19	10	9	6	6	2	4	3		1	1	2		1		1								1	2					1			1											1																																																						1			1	85
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1	1	1										1									1																																						1																																											6
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	1	2	2	1	1	1				1																															1																																																													12
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	9	8	4	8	7	3	6		1	1	1	2	2	1	1																				1																																						1			1																										76
AC	-	-	-	9	5	2		4			3	2	1	1		1					1							1		1																																																																																										31
AG	-	-	-	35	12	14	3	9	3	2			1	3		2	1																																																																																																							85
AT	-	-	-	82	33	17	12	13	5	2	3	1	4	1		1																																																																																																								174
CA	-	-	-	15	5	2			1				2				1						1			1	1																																																																																													29
CT	-	-	-	11	8	9	3	2	4	1	2		2	1	1																																																																																																									44
GA	-	-	-	24	10	5	5	1	3	2	1	1																																																																																																												52
GC	-	-	-	2		1																																																																																																																		3
GT	-	-	-	9	3	1	1				1			1			1			1																																																																																																				18
TA	-	-	-	118	34	17	13	4	3	6	2	3	1		1	1																																																																																																								203
TC	-	-	-	29	12	14	8	2	1	1	4	2	2	1	1			1				1																																																																																																		79
TG	-	-	-	9	2	5	1	3	1		1																																																																																																													22
AAC	-	-	2	3	1																																																																																																																			6
AAG	-	-	10	6	3	1	1	4	1		1				1									1												1																																																																																				30
AAT	-	-	18	6	4		1		1	1		1																																																																																																												32
ACA	-	-	3	1	1	1	1																																																																																																																	7
ACC	-	-	5	1		1																																																																																																																		7
ACG	-	-	1	1																																																																																																																				2
ACT	-	-	2																										1																																																																																											3
AGA	-	-	6	3		1															1						1																																																																																													12
AGC	-	-	2	5	1	1																																																																																																																		9
AGG	-	-	2			2																																																																																																																		4
AGT	-	-	2		2		1			1																													1																																																																																	7
ATA	-	-	13	8	2	2			1																																																																																																															26
ATC	-	-	2																																																																																																																					2
ATG	-	-	5	1	1																																																																																																																			7
ATT	-	-	9	5	2	1	1			1		1																																																																																																												20
CAA	-	-	7	5	1	1																																																																																																																		14
CAC	-	-	3	2		2																																																																																																																		7
CAG	-	-	4		2	1	1			1																																																																																																														9
CAT	-	-	6	2		1															1																																																																																																			10
CCA	-	-	2																																																																																																																					2
CCG	-	-	4																																																																																																																					4
CCT	-	-	1	1						1																																																																																																														3
CGA	-	-	1																																																																																																																					1
CGC	-	-	3		1																																																																																																																			4
CGG	-	-		2		1																																																																																																																		3
CGT	-	-	1																																																																																																																					1
CTA	-	-	2		1																							1																																																																																												4
CTC	-	-	3	2	1		1																																																																																																																	7
CTG	-	-	4	1	2	1		1																																																																																																																9
CTT	-	-	16	6	1		1		1																																																																																																															25
GAA	-	-	9	4	1	1	1	4	1																																																																																																															21
GAC	-	-	1																																																																																																																					1
GAG	-	-	4	1					1																																																																																																															6
GAT	-	-	4			1	1																																																																																																																	6
GCA	-	-	3	1	1	1																																																																																																																		6
GCC	-	-	7	1																																																																																																																				8
GCG	-	-	3																																																																																																																					3
GCT	-	-	3	1																																																																																																																				4
GGA	-	-	3	1		4	1																																																																																																																	9
GGC	-	-	5	2																																																																																																																				7
GGT	-	-	1	1																																																																																																																				2
GTA	-	-	3	2								1																																																																																																												6
GTC	-	-	2																																																																																																																					2
GTG	-	-	3			1	1																																																																																																																	5
GTT	-	-	4	1		1																																																																																																																		6
TAA	-	-	13	4	2	1																																																																																																																		20
TAC	-	-	4		2																																																																																																																			6
TAG	-	-	3			1	1		2			1												1															1																																																																																	10
TAT	-	-	6	7		2	1		1																																																																																																															17
TCA	-	-	7	2		1		1																																																																																																																11
TCC	-	-	3	1	1			1					1																																																																																																											7
TCG	-	-	1	2	2																																																																																																																			5
TCT	-	-	6	1	2	2	1						1																																																																																																											13
TGA	-	-	3	1	1	1																																																																																																																		6
TGC	-	-	5	5	1																																																																																																																			11
TGG	-	-	7			1																																																																																																																		8
TGT	-	-	5	2	1	2																																																																																																																		10
TTA	-	-	18	3	6	3			1																																																																																																															31
TTC	-	-	8	5	1	2			1		1	1		1						1														1																																																																																						22
TTG	-	-	1	2			1																																			1																																																																														5
AAAG	-	14	7	2	3	1	1	1		1																																																																																																														30
AAAT	-	17	5	2	2																																																																																																																			26
AAGA	-	6	3	2																																																																																																																				11
AAGG	-	1																																																																																																																						1
AATA	-	5																																																																																																																						5
AATC	-	3	1																																																																																																																					4
AATT	-	12		1																																																																																																																				13
ACAG	-			1																																																																																																																				1
ACAT	-	3		1	1																																																																																																																			5
ACTA	-	1																																																																																																																						1
AGAA	-	5	1	1	1																																																																																																																			8
AGAT	-	1	2																																																																																																																					3
AGCA	-	1																																																																																																																						1
AGGG	-	1																																																																																																																						1
AGTC	-	1																																																																																																																						1
AGTG	-	1																																																																																																																						1
AGTT	-	1																																																																																																																						1
ATAA	-	10	1																																																																																																																					11
ATAC	-	5																																																																																																																						5
ATAG	-	2	2																																																																																																																					4
ATCA	-	3	2																																																																																																																					5
ATGA	-			1																																																																																																																				1
ATGG	-	2																																																																																																																						2
ATGT	-	2	1	2	1																																																																																																																			6
ATTA	-	6		1																																																																																																																				7
ATTC	-	1		1																																																																																																																				2
ATTG	-	1																																																																																																																						1
ATTT	-	5																																																																																																																						5
CAAT	-	2		1																																																																																																																				3
CACT	-	1																																																																																																																						1
CAGT	-	1																																																																																																																						1
CATA	-	1	2				1																																																																																																																	4
CCCT	-	1																																																																																																																						1
CCTA	-	1																																																																																																																						1
CGCT	-	1																																																																																																																						1
CTCA	-	2																																																																																																																						2
CTGT	-			1																																																																																																																				1
CTTC	-	1																																																																																																																						1
CTTT	-	5	5																																																																																																																					10
GAAA	-	6				1															1																																																																																																			8
GAAG	-	1																																																																																																																						1
GAAT	-		1																																																																																																																					1
GACG	-	1																																																																																																																						1
GAGG	-	1																																																																																																																						1
GAGT	-	2		1																																																																																																																				3
GATG	-	1	1																																																																																																																					2
GATT	-	1	1																																																																																																																					2
GCTT	-	1																																																																																																																						1
GGAT	-	1																																																																																																																						1
GGCA	-	1																																																																																																																						1
GGTA	-			1																																																																																																																				1
GTAG	-	1	1																																																																																																																					2
GTAT	-	3	1																																																																																																																					4
GTGA	-	1																																																																																																																						1
GTGC	-	1																																																																																																																						1
TAAA	-	8	1																																																																																																																					9
TAAC	-	1																																																																																																																						1
TACA	-	7	5	1	2																																																																																																																			15
TACT	-	1																																																																																																																						1
TAGA	-	2																																																																																																																						2
TAGC	-	1																																																																																																																						1
TAGG	-	1																																																																																																																						1
TATC	-								1																																																																																																															1
TATG	-	4	1			1																																																																																																																		6
TATT	-	4	1																																																																																																																					5
TCAA	-	2		1																																																																																																																				3
TCAC	-	2																																																																																																																						2
TCAT	-	3																																																																																																																						3
TCCA	-	1																																																																																																																						1
TCCT	-		1																																																																																																																					1
TCGG	-	1																																																																																																																						1
TCTA	-	1																																																																																																																						1
TCTT	-	8	1	1	2																																																																																																																			12
TGAA	-	1																																																																																																																						1
TGAC	-	1																																																																																																																						1
TGAG	-	1																																																																																																																						1
TGAT	-	1	1																																																																																																																					2
TGCA	-	1																																																																																																																						1
TGTA	-	7	2	1																																																																																																																				10
TTAA	-	2																																																																																																																						2
TTAT	-	11		1																																																																																																																				12
TTCA	-	1																																																																																																																						1
TTCC	-	1																																																																																																																						1
TTCT	-	4	1																																																																																																																					5
TTGA	-	3	2	1																																																																																																																				6
TTGG	-	1																																																																																																																						1
TTGT	-	1																																																																																																																						1
TTTA	-	17	5	1																																																																																																																				23
TTTC	-	11	9	6		2																																																																																																																		28
TTTG	-	1																																																																																																																						1
AAAAC	2	2																																																																																																																						4
AAAAG	40	18	4	2	1																																																																																																																			65
AAAAT	29	10	2							1																																																																																																														42
AAACC	1																																																																																																																							1
AAAGA	18	6																																																																																																																						24
AAAGG	7																																																																																																																							7
AAATA	7	2	1																																																																																																																					10
AAATC	1																																																																																																																							1
AAATG	1																																																																																																																							1
AAATT	8																																																																																																																							8
AACAC	2																																																																																																																							2
AACTA	2																																																																																																																							2
AAGAA	7	4																																																																																																																						11
AAGAG	1																																																																																																																							1
AAGGA	3																																																																																																																							3
AAGGG	1																																																																																																																							1
AAGTA	1																																																																																																																							1
AAGTC	1																																																																																																																							1
AATAA	14																																																																																																																							14
AATAT	2	2																																																																																																																						4
AATCA	1																																																																																																																							1
AATCC	2																																																																																																																							2
AATGA	3																																																																																																																							3
AATGC		1																																																																																																																						1
AATTA	5																																																																																																																							5
AATTC		1																																																																																																																						1
AATTG	1																																																																																																																							1
AATTT	2																																																																																																																							2
ACAAA	1																																																																																																																							1
ACAAC	2																																																																																																																							2
ACACC	1																																																																																																																							1
ACACG			1																																																																																																																					1
ACAGG	1																																																																																																																							1
ACATG	1																																																																																																																							1
ACCAA	1																																																																																																																							1
ACCAG	1																																																																																																																							1
ACCCT		1																																																																																																																						1
ACCGT	1																																																																																																																							1
ACGAA	1																																																																																																																							1
ACGAG	1																																																																																																																							1
ACGCA	1																																																																																																																							1
ACTAT	1																																																																																																																							1
AGAAA	11	3																																																																																																																						14
AGAAG	4	1																																																																																																																						5
AGACA	1																																																																																																																							1
AGAGA	1																																																																																																																							1
AGAGG	1																																																																																																																							1
AGATC		1																																																																																																																						1
AGATG	1		1																																																																																																																					2
AGCCA	1																																																																																																																							1
AGCTA	1																																																																																																																							1
AGCTG	1																																																																																																																							1
AGGAA	3																																																																																																																							3
AGGAG	1																																																																																																																							1
AGGAT	2																																																																																																																							2
AGGGA	2																																																																																																																							2
AGGGG	1																																																																																																																							1
AGTAC	3																																																																																																																							3
AGTCA	1																																																																																																																							1
ATAAA	12																																																																																																																							12
ATAAT	3																																																																																																																							3
ATACC	2																																																																																																																							2
ATACT	1																																																																																																																							1
ATATA	6																																																																																																																							6
ATATT	5																																																																																																																							5
ATCCA	1																																																																																																																							1
ATCCC	1	1																																																																																																																						2
ATCTA	1																																																																																																																							1
ATCTC	3	1																																																																																																																						4
ATGAA	1																																																																																																																							1
ATGAG	3																																																																																																																							3
ATGAT	2																																																																																																																							2
ATGCA	2	1																																																																																																																						3
ATGTC	1																																																																																																																							1
ATTAA	13		1																																																																																																																					14
ATTAT	2																																																																																																																							2
ATTCA	2																																																																																																																							2
ATTTA	2																																																																																																																							2
ATTTC	1																																																																																																																							1
ATTTG	2																																																																																																																							2
ATTTT	8	2		1																																																																																																																				11
CAAAA	1																																																																																																																							1
CAAAG	2																																																																																																																							2
CAAAT	1																																																																																																																							1
CAACA	1																																																																																																																							1
CAAGA		1																																																																																																																						1
CAAGT	1																																																																																																																							1
CAATA	2																																																																																																																							2
CAATG	1																																																																																																																							1
CACAT	1																																																																																																																							1
CACTT	1																																																																																																																							1
CAGAT		1																																																																																																																						1
CAGCC	1																																																																																																																							1
CATAC	2																																																																																																																							2
CATAT	1																																																																																																																							1
CATCT	2																																																																																																																							2
CATGT	1																																																																																																																							1
CATTC	1																																																																																																																							1
CATTT	1																																																																																																																							1
CCAAC	2																																																																																																																							2
CCACC	1																																																																																																																							1
CCACG	1																																																																																																																							1
CCAGT		1																																																																																																																						1
CCATA	1																																																																																																																							1
CCATT	1	1																																																																																																																						2
CCCAA	1																																																																																																																							1
CCCAT	1																																																																																																																							1
CCCCT	2																																																																																																																							2
CCCTC	1																																																																																																																							1
CCCTT	1																																																																																																																							1
CCGGT	1																																																																																																																							1
CCGTG	1																																																																																																																							1
CCTAT	1																																																																																																																							1
CCTCA	1																																																																																																																							1
CCTCC		1																																																																																																																						1
CCTTT	1																																																																																																																							1
CGAAC	1																																																																																																																							1
CGATA	1																																																																																																																							1
CGCCT	1																																																																																																																							1
CGGTA		1																																																																																																																						1
CGTCT		1																																																																																																																						1
CGTTC	1																																																																																																																							1
CGTTT	1																																																																																																																							1
CTAAA	1																																																																																																																							1
CTACA		1																																																																																																																						1
CTAGA	1																																																																																																																							1
CTAGT	1	1																																																																																																																						2
CTATC	3																																																																																																																							3
CTATG	1																																																																																																																							1
CTATT	1																																																																																																																							1
CTCAA	1																																																																																																																							1
CTCAG	1																																																																																																																							1
CTCCA	1																																																																																																																							1
CTGCC	1																																																																																																																							1
CTGTA	1																																																																																																																							1
CTGTC	1																																																																																																																							1
CTTCC	2	1																																																																																																																						3
CTTCT	2																																																																																																																							2
CTTTT	15	10	1																																																																																																																					26
GAAAA	14	3	1																																																																																																																					18
GAAAG	4																																																																																																																							4
GAAAT	1																																																																																																																							1
GAACC	1																																																																																																																							1
GAAGA	1																																																																																																																							1
GAAGG	2																																																																																																																							2
GAATA	1																																																																																																																							1
GAATT	1																																																																																																																							1
GACTT	1																																																																																																																							1
GAGAA	1																																																																																																																							1
GAGAC	1																																																																																																																							1
GAGAG	1																																																																																																																							1
GAGAT		1																																																																																																																						1
GAGGG	2																																																																																																																							2
GATAA	2																																																																																																																							2
GATGA	2																																																																																																																							2
GATGG	1																																																																																																																							1
GATGT	1																																																																																																																							1
GATTG	2																																																																																																																							2
GCAAA	1																																																																																																																							1
GCAAC	1																																																																																																																							1
GCATC	1																																																																																																																							1
GCTCA	1																																																																																																																							1
GCTGA	1																																																																																																																							1
GGAAA	3																																																																																																																							3
GGAGA	2		1																																																																																																																					3
GGAGC	1																																																																																																																							1
GGATT	1																																																																																																																							1
GGCTC	1																																																																																																																							1
GGCTG	1																																																																																																																							1
GGGAA	1																																																																																																																							1
GGGAC		1																																																																																																																						1
GGGAG	1																																																																																																																							1
GGGAT	1																																																																																																																							1
GGGGT	1																																																																																																																							1
GGGTG	1																																																																																																																							1
GGTCT		1																																																																																																																						1
GGTGT	1																																																																																																																							1
GGTTA		1																																																																																																																						1
GGTTC	1																																																																																																																							1
GGTTG	1																																																																																																																							1
GTACA	1																																																																																																																							1
GTACG	1																																																																																																																							1
GTATA	1																																																																																																																							1
GTATG	1																																																																																																																							1
GTCAT		1																																																																																																																						1
GTCCC	1																																																																																																																							1
GTCGA		1																																																																																																																						1
GTCTA	2																																																																																																																							2
GTCTT	2																																																																																																																							2
GTGTA	1																																																																																																																							1
GTTAG	1																																																																																																																							1
GTTGG	2																																																																																																																							2
GTTTA	1																																																																																																																							1
GTTTG	1																																																																																																																							1
GTTTT	1																																																																																																																							1
TAAAA	15	2	1																																																																																																																					18
TAAAT	5																																																																																																																							5
TAACA	1																																																																																																																							1
TAACC	1																																																																																																																							1
TAATA	2																																																																																																																							2
TAATC	1																																																																																																																							1
TAATT	8	1																																																																																																																						9
TACAG	2																																																																																																																							2
TACAT	1		1																																																																																																																					2
TACCA	1																																																																																																																							1
TACCC	1																																																																																																																							1
TACTG	1																																																																																																																							1
TAGTC	1																																																																																																																							1
TAGTT	1																																																																																																																							1
TATAA	3																																																																																																																							3
TATAT	4																																																																																																																							4
TATGT	1																																																																																																																							1
TATTA	5																																																																																																																							5
TATTT	6	3	1																																																																																																																					10
TCAAC	1																																																																																																																							1
TCACA	1																																																																																																																							1
TCATA	1																																																																																																																							1
TCATT	1	1	1																																																																																																																					3
TCCCC	1																																																																																																																							1
TCCTC	1																																																																																																																							1
TCCTG	1																																																																																																																							1
TCGCC		1																																																																																																																						1
TCGGG	1																																																																																																																							1
TCGTT		1																																																																																																																						1
TCTAC	1																																																																																																																							1
TCTAT		1																																																																																																																						1
TCTCC	1																																																																																																																							1
TCTCT	2		1																																																																																																																					3
TCTGC	1																																																																																																																							1
TCTTC	3																																																																																																																							3
TCTTG	1																																																																																																																							1
TCTTT	15	1	1																																																																																																																					17
TGAAA	3																																																																																																																							3
TGAGC	2																																																																																																																							2
TGATA	3																																																																																																																							3
TGATG	1																																																																																																																							1
TGATT			1																																																																																																																					1
TGCTA	1																																																																																																																							1
TGCTG	1																																																																																																																							1
TGGGA	1																																																																																																																							1
TGGGT	1																																																																																																																							1
TGTAC	2																																																																																																																							2
TGTAT	1																																																																																																																							1
TGTCG	1																																																																																																																							1
TGTCT	1																																																																																																																							1
TGTGG	1																																																																																																																							1
TGTTT	2	1																																																																																																																						3
TTAAA	6																																																																																																																							6
TTAAT	14																																																																																																																							14
TTATA	2																																																																																																																							2
TTATT	9	1																																																																																																																						10
TTCAG	1																																																																																																																							1
TTCTC	1																																																																																																																							1
TTCTT	13																																																																																																																							13
TTGAA	1																																																																																																																							1
TTGCT		1																																																																																																																						1
TTGGA	1																																																																																																																							1
TTGGG	1																																																																																																																							1
TTGGT	1																																																																																																																							1
TTGTA	1																																																																																																																							1
TTGTT	1																																																																																																																							1
TTTAA	5																																																																																																																							5
TTTAC	1																																																																																																																							1
TTTAG	1																																																																																																																							1
TTTAT	19	2																																																																																																																						21
TTTCC	4																																																																																																																							4
TTTCT	19	4	2	1																																																																																																																				26
TTTGA	4																																																																																																																							4
TTTGG	1																																																																																																																							1
TTTGT	1																																																																																																																							1
TTTTA	22	5	2				1																																																																																																																	30
TTTTC	44	12	3	1																																																																																																																				60
TTTTG	5																																																																																																																							5
AAAAAG	16	4	1																																																																																																																					21
AAAAAT	20	3	1																																																																																																																					24
AAAACA	2																																																																																																																							2
AAAAGA	9	3																																																																																																																						12
AAAAGC	1		1																																																																																																																					2
AAAAGG	1																																																																																																																							1
AAAAGT	1																																																																																																																							1
AAAATA	7																																																																																																																							7
AAAATT	1																																																																																																																							1
AAACAG		1																																																																																																																						1
AAACCA	1		1																																																																																																																					2
AAAGAA	9	1																																																																																																																						10
AAAGAG	1	1																																																																																																																						2
AAAGGA	1																																																																																																																							1
AAAGGT	1																																																																																																																							1
AAATAA	4																																																																																																																							4
AAATAG	1																																																																																																																							1
AACACA	1																																																																																																																							1
AACAGG	1																																																																																																																							1
AACCCC	1																																																																																																																							1
AACCTG	1																																																																																																																							1
AACGGA	1																																																																																																																							1
AACTCC	1																																																																																																																							1
AAGAAA	3		1																																																																																																																					4
AAGAGG		1																																																																																																																						1
AAGATA	1																																																																																																																							1
AAGCCG		1																																																																																																																						1
AATAAA	4	1				1																																																																																																																		6
AATACC	1																																																																																																																							1
AATCTA	1																																																																																																																							1
AATGTA		1																																																																																																																						1
AATTAA	1																																																																																																																							1
AATTTA	1																																																																																																																							1
AATTTT	2	1																																																																																																																						3
ACAACG	1																																																																																																																							1
ACAACT	1																																																																																																																							1
ACAATC	1																																																																																																																							1
ACAATT	1																																																																																																																							1
ACAGCA			1																																																																																																																					1
ACCCAA	1																																																																																																																							1
ACCCCA	1																																																																																																																							1
ACCGCC	1																																																																																																																							1
ACGACC	1																																																																																																																							1
ACGATG	1																																																																																																																							1
ACGTCA	1																																																																																																																							1
ACTACC														1																																																																																																										1
ACTTTG	1	1																																																																																																																						2
AGAAAA	2																																																																																																																							2
AGAAAG	1																																																																																																																							1
AGACGG	1																																																																																																																							1
AGAGAA	1																																																																																																																							1
AGAGCC	1																																																																																																																							1
AGAGCG	1																																																																																																																							1
AGAGCT	1																																																																																																																							1
AGAGGC		1																																																																																																																						1
AGAGGG	1																																																																																																																							1
AGCGGG	1																																																																																																																							1
AGCGTC	1																																																																																																																							1
AGCTGC	1																																																																																																																							1
AGGCAG	1																																																																																																																							1
AGGCGA	1																																																																																																																							1
AGGCGC	1																																																																																																																							1
AGGGCA	2																																																																																																																							2
AGGGTC	1																																																																																																																							1
AGGTGG		1																																																																																																																						1
AGTAGA		1																																																																																																																						1
AGTATC	1																																																																																																																							1
AGTATG	1																																																																																																																							1
AGTGAG	1																																																																																																																							1
AGTGGT	1																																																																																																																							1
AGTTTC	1																																																																																																																							1
ATAAAA	4	1																																																																																																																						5
ATAAAT	1																																																																																																																							1
ATAACT	1																																																																																																																							1
ATAATC	1																																																																																																																							1
ATAATT	2																																																																																																																							2
ATAGTA	1																																																																																																																							1
ATATAA	1																																																																																																																							1
ATATTA	1																																																																																																																							1
ATCAAA		1																																																																																																																						1
ATCAAC							1																																																																																																																	1
ATCCCA	1																																																																																																																							1
ATCCCC	1																																																																																																																							1
ATCCTC	2																																																																																																																							2
ATCTAC	1																																																																																																																							1
ATCTTC	1																																																																																																																							1
ATGAAC	1																																																																																																																							1
ATGACC	1																																																																																																																							1
ATGACG	1																																																																																																																							1
ATGATT	1																																																																																																																							1
ATGCCA	1																																																																																																																							1
ATGCTG	1																																																																																																																							1
ATGGCT	1																																																																																																																							1
ATGTAC	1	1																																																																																																																						2
ATTAAT	4																																																																																																																							4
ATTATA	2																																																																																																																							2
ATTCAC	1																																																																																																																							1
ATTTAA	2	2																																																																																																																						4
ATTTTT	2																																																																																																																							2
CAAAAG	1																																																																																																																							1
CAACAC	1																																																																																																																							1
CAACAG	1																																																																																																																							1
CAACCC	1																																																																																																																							1
CAAGAA	1																																																																																																																							1
CACGGC	1																																																																																																																							1
CACTGC	1																																																																																																																							1
CAGAAG	1																																																																																																																							1
CAGCCC		1																																																																																																																						1
CAGCTC	2																																																																																																																							2
CAGGCT	1																																																																																																																							1
CAGTCA	1																																																																																																																							1
CAGTGG		1																																																																																																																						1
CATAGC	1																																																																																																																							1
CATCAA	1																																																																																																																							1
CATTTC	1																																																																																																																							1
CATTTT	1																																																																																																																							1
CCAAAC	2																																																																																																																							2
CCAACC	1																																																																																																																							1
CCAAGA	1																																																																																																																							1
CCACAA	1																																																																																																																							1
CCACGG	1																																																																																																																							1
CCAGTG	1																																																																																																																							1
CCATAA	1																																																																																																																							1
CCATGT	1																																																																																																																							1
CCCCAA	1																																																																																																																							1
CCCCAC	1																																																																																																																							1
CCCCCT	1																																																																																																																							1
CCGATG	1																																																																																																																							1
CCGCCT	1																																																																																																																							1
CCGCGC	1																																																																																																																							1
CCGGAG	1																																																																																																																							1
CCTGCA	1																																																																																																																							1
CCTTTC	1	1																																																																																																																						2
CGACCT	1																																																																																																																							1
CGAGGA	1																																																																																																																							1
CGATAG		1																																																																																																																						1
CGATGA				1																																																																																																																				1
CGCAGC	1																																																																																																																							1
CGCTCA	1																																																																																																																							1
CGGAGC	1																																																																																																																							1
CGGGTT	1																																																																																																																							1
CGTCCT	1																																																																																																																							1
CGTGAT	1																																																																																																																							1
CTAATT	1																																																																																																																							1
CTACCA	1																																																																																																																							1
CTATAC	1																																																																																																																							1
CTATGA	1																																																																																																																							1
CTCATC	1																																																																																																																							1
CTCCCG	1																																																																																																																							1
CTCTCC	1																																																																																																																							1
CTCTTC	2																																																																																																																							2
CTGAGC	1																																																																																																																							1
CTGATG	1																																																																																																																							1
CTGCCG		1																																																																																																																						1
CTGCGA	1																																																																																																																							1
CTGCTA	1																																																																																																																							1
CTGCTC	2																																																																																																																							2
CTGGAG	1																																																																																																																							1
CTGGCT	1																																																																																																																							1
CTGGGG	1																																																																																																																							1
CTTCCT	1																																																																																																																							1
CTTCTA	1																																																																																																																							1
CTTGTT	1																																																																																																																							1
CTTTCT	1																																																																																																																							1
CTTTTC	2																																																																																																																							2
CTTTTT	8	2																																																																																																																						10
GAAAAA	3																																																																																																																							3
GAAAAG	1																																																																																																																							1
GAAAAT	2																																																																																																																							2
GAAGAC	2																																																																																																																							2
GAAGAG	3																																																																																																																							3
GAAGTG	1																																																																																																																							1
GAATGG	1																																																																																																																							1
GAATTG	1																																																																																																																							1
GACAAG		1																																																																																																																						1
GACAGC	1																																																																																																																							1
GACAGG	1																																																																																																																							1
GACATG	1																																																																																																																							1
GACGAG	3																																																																																																																							3
GACGCA	1																																																																																																																							1
GACTAC	1																																																																																																																							1
GAGAAA	1																																																																																																																							1
GAGCAC	1																																																																																																																							1
GAGCCA	2																																																																																																																							2
GAGCGC	1																																																																																																																							1
GAGGAT	2	1																																																																																																																						3
GAGGCG	1																																																																																																																							1
GAGGGA	1	1																																																																																																																						2
GAGGTG	1																																																																																																																							1
GAGTGG	1																																																																																																																							1
GATATC	1																																																																																																																							1
GATATG		1																																																																																																																						1
GATCCT	1																																																																																																																							1
GATGAG	2	1																																																																																																																						3
GATGGC	1																																																																																																																							1
GATGGT	2																																																																																																																							2
GATGTT	1																																																																																																																							1
GCAAAA		1																																																																																																																						1
GCAACC	1																																																																																																																							1
GCACAT	1																																																																																																																							1
GCAGAA	1																																																																																																																							1
GCAGCC	1																																																																																																																							1
GCAGTA	1																																																																																																																							1
GCCACC	1																																																																																																																							1
GCCACG	1																																																																																																																							1
GCCATT	1																																																																																																																							1
GCCGAT	1																																																																																																																							1
GCCGCT		1																																																																																																																						1
GCCTGA	1		1																																																																																																																					2
GCGATG	1																																																																																																																							1
GCGATT	1																																																																																																																							1
GCGCAG		1																																																																																																																						1
GCGGCA	1																																																																																																																							1
GCTAGA		1																																																																																																																						1
GCTCCT		1																																																																																																																						1
GCTGCG	1																																																																																																																							1
GCTGGA	1																																																																																																																							1
GCTTCC	1																																																																																																																							1
GCTTCG	1																																																																																																																							1
GGAAAT		1																																																																																																																						1
GGAAGA	1																																																																																																																							1
GGACGC	1																																																																																																																							1
GGACTT	1																																																																																																																							1
GGAGAA	1																																																																																																																							1
GGAGAG	1	1																																																																																																																						2
GGAGCC	2																																																																																																																							2
GGAGGG	1																																																																																																																							1
GGATTG	1																																																																																																																							1
GGCAAT		1																																																																																																																						1
GGCGGA	1																																																																																																																							1
GGCTGC	3	1																																																																																																																						4
GGGAAA		1																																																																																																																						1
GGGAGA	1																																																																																																																							1
GGGATC	1																																																																																																																							1
GGTCCC		1																																																																																																																						1
GGTGAG	1																																																																																																																							1
GGTGGC	1																																																																																																																							1
GGTGTG		1																																																																																																																						1
GTAAAA	1																																																																																																																							1
GTAGCA	1																																																																																																																							1
GTCACC	1																																																																																																																							1
GTCGCA	1																																																																																																																							1
GTGGCA	1																																																																																																																							1
GTGGTT	2																																																																																																																							2
GTGTAT	1																																																																																																																							1
GTGTCT	1																																																																																																																							1
GTGTGC	1																																																																																																																							1
GTGTTG	1																																																																																																																							1
GTTCCT	1																																																																																																																							1
GTTCTT	1																																																																																																																							1
GTTGAA	2																																																																																																																							2
GTTGCA	1																																																																																																																							1
GTTGGC		1																																																																																																																						1
GTTGGT	1																																																																																																																							1
GTTGTC	1																																																																																																																							1
GTTTGG	1																																																																																																																							1
TAAAAA	5																																																																																																																							5
TAAAAT	1																																																																																																																							1
TAAGAA	1																																																																																																																							1
TAATAG	1																																																																																																																							1
TAATAT	1																																																																																																																							1
TAATTA	2																																																																																																																							2
TAGAAA	1																																																																																																																							1
TAGACA	1																																																																																																																							1
TAGTAA	1																																																																																																																							1
TAGTGA	1																																																																																																																							1
TAGTGG	1																																																																																																																							1
TATAAT	3																																																																																																																							3
TATATG	1																																																																																																																							1
TATCTT	1																																																																																																																							1
TATGCA	1																																																																																																																							1
TATTAA	3																																																																																																																							3
TATTTT	5	2																																																																																																																						7
TCACCA	1																																																																																																																							1
TCACGA	1																																																																																																																							1
TCAGGC	1																																																																																																																							1
TCATCG	4																																																																																																																							4
TCATTC	1																																																																																																																							1
TCATTT	2																																																																																																																							2
TCCAAG	1																																																																																																																							1
TCCAGC		1																																																																																																																						1
TCCCTA		1																																																																																																																						1
TCCCTG	1																																																																																																																							1
TCCTCA	1																																																																																																																							1
TCCTGC	1																																																																																																																							1
TCCTTT			1																																																																																																																					1
TCGAGA	1																																																																																																																							1
TCGATC	1																																																																																																																							1
TCGCTA	1																																																																																																																							1
TCGGGA	1																																																																																																																							1
TCGGTC	1																																																																																																																							1
TCGTCA	2																																																																																																																							2
TCGTCT	1																																																																																																																							1
TCGTTG	1																																																																																																																							1
TCTACG		1																																																																																																																						1
TCTGAG	1																																																																																																																							1
TCTTCA		1																																																																																																																						1
TCTTCC	3																																																																																																																							3
TCTTGT	1				1																																																																																																																			2
TCTTTC		1																																																																																																																						1
TCTTTG	1																																																																																																																							1
TCTTTT	2	1	1																																																																																																																					4
TGAAGA		1																																																																																																																						1
TGAATG	1																																																																																																																							1
TGACAT	1																																																																																																																							1
TGACGA	1																																																																																																																							1
TGACGC	1																																																																																																																							1
TGAGAA	1																																																																																																																							1
TGAGGA	1																																																																																																																							1
TGAGGC	1																																																																																																																							1
TGATGC	1																																																																																																																							1
TGATGT	1																																																																																																																							1
TGATTA	1																																																																																																																							1
TGCAGA	1																																																																																																																							1
TGCGCT	1																																																																																																																							1
TGCTGG	1	1																																																																																																																						2
TGCTGT	2		1																																																																																																																					3
TGCTTT	1																																																																																																																							1
TGGGCC	1																																																																																																																							1
TGGTAG	1																																																																																																																							1
TGGTGA	2																																																																																																																							2
TGTATA	1																																																																																																																							1
TGTATG	1																																																																																																																							1
TGTCCT	1																																																																																																																							1
TGTCTT	1																																																																																																																							1
TGTGGC	1																																																																																																																							1
TGTGGT	1																																																																																																																							1
TGTGTA	1																																																																																																																							1
TGTTGC	1																																																																																																																							1
TGTTTT	1																																																																																																																							1
TTAAAA	2																																																																																																																							2
TTAATA	5																																																																																																																							5
TTAATT	3																																																																																																																							3
TTATAA		1																																																																																																																						1
TTATGA	1																																																																																																																							1
TTATTT	6																																																																																																																							6
TTCCTC	1																																																																																																																							1
TTCCTG	1																																																																																																																							1
TTCGGG	1																																																																																																																							1
TTCTCA	1																																																																																																																							1
TTCTCT	2																																																																																																																							2
TTCTGC	1																																																																																																																							1
TTCTTT	1	2																																																																																																																						3
TTGAGG	1																																																																																																																							1
TTGGGA	1																																																																																																																							1
TTGTAG	1																																																																																																																							1
TTGTTA	1																																																																																																																							1
TTTAGA	1																																																																																																																							1
TTTATA	1																																																																																																																							1
TTTATT	8		1																																																																																																																					9
TTTCAA	1																																																																																																																							1
TTTCAC	1																																																																																																																							1
TTTCAT	1																																																																																																																							1
TTTCCC	1																																																																																																																							1
TTTCCT	1																																																																																																																							1
TTTCTC	1																																																																																																																							1
TTTCTT	13																																																																																																																							13
TTTGGG	1																																																																																																																							1
TTTGTT	1																																																																																																																							1
TTTTAA	3																																																																																																																							3
TTTTAT	5	2																																																																																																																						7
TTTTCA	2																																																																																																																							2
TTTTCC	1																																																																																																																							1
TTTTCT	7	4																																																																																																																						11
TTTTGT		1																																																																																																																						1
TTTTTA	8	4	1																																																																																																																					13
TTTTTC	11																																																																																																																							11

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	31	28	18	13	14	13	5	10	3	1	2	2	4	2	2	1	1								1	2					1			1		1									1																													1			1																						1			1	161
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	2	3	2	1	1	1				1		1									1																				1																		1																																											18
AC/GT	-	-	-	42	15	10	2	7	2		5	2	3	2		1	2			1	1		1			1	1	1		1																																																																																										100
AG/CT	-	-	-	99	42	42	19	14	11	6	7	3	5	5	2	2	1	1				1																																																																																																		260
AT/AT	-	-	-	200	67	34	25	17	8	8	5	4	5	1	1	2																																																																																																								377
CG/CG	-	-	-	2		1																																																																																																																		3
AAC/GTT	-	-	22	14	4	5	2																																			1																																																																														48
AAG/CTT	-	-	55	25	8	7	4	8	4		2	1	1	1	1					1	1			1			1							1		1																																																																																				123
AAT/ATT	-	-	77	33	16	9	3		4	2		2																																																																																																												146
ACC/GGT	-	-	21	4		5	1																																																																																																																	31
ACG/CGT	-	-	7	3	2																																																																																																																			12
ACT/AGT	-	-	16	2	5	1	2		2	1		2												1				1	1										2																																																																																	36
AGC/CTG	-	-	21	13	7	4	1	1		1																																																																																																														48
AGG/CCT	-	-	16	6	2	6	2	1	1	1			1																																																																																																											36
ATC/ATG	-	-	27	6	2	4	1	1													1																																																																																																			42
CCG/CGG	-	-	22	5	1	1																																																																																																																		29
AAAC/GTTT	-	2																																																																																																																						2
AAAG/CTTT	-	59	27	12	6	4	1	1		1											1																																																																																																			112
AAAT/ATTT	-	77	13	4	2																																																																																																																			96
AACC/GGTT	-	1																																																																																																																						1
AACT/AGTT	-	3																																																																																																																						3
AAGC/CTTG	-	2																																																																																																																						2
AAGG/CCTT	-	4	1																																																																																																																					5
AAGT/ACTT	-	1																																																																																																																						1
AATC/ATTG	-	16	7	3																																																																																																																				26
AATG/ATTC	-	6	1	2																																																																																																																				9
AATT/AATT	-	20		2																																																																																																																				22
ACAG/CTGT	-			2																																																																																																																				2
ACAT/ATGT	-	32	12	5	4	1	1																																																																																																																	55
ACCG/CGGT	-	1																																																																																																																						1
ACCT/AGGT	-	3	1	1																																																																																																																				5
ACGC/CGTG	-	1																																																																																																																						1
ACGG/CCGT	-	1																																																																																																																						1
ACTC/AGTG	-	10		1																																																																																																																				11
ACTG/AGTC	-	3																																																																																																																						3
AGAT/ATCT	-	6	4						1																																																																																																															11
AGCG/CGCT	-	1																																																																																																																						1
AGCT/AGCT	-	1																																																																																																																						1
AGGC/CCTG	-	1																																																																																																																						1
AGGG/CCCT	-	3																																																																																																																						3
ATCC/ATGG	-	5	1																																																																																																																					6
ATGC/ATGC	-	1																																																																																																																						1
AAAAC/GTTTT	14	3																																																																																																																						17
AAAAG/CTTTT	196	61	12	4	1																																																																																																																			274
AAAAT/ATTTT	141	27	7	1			1			1																																																																																																														178
AAACC/GGTTT	5																																																																																																																							5
AAACG/CGTTT	2	1																																																																																																																						3
AAACT/AGTTT	6																																																																																																																							6
AAAGC/CTTTG	3	1																																																																																																																						4
AAAGG/CCTTT	25																																																																																																																							25
AAAGT/ACTTT	2																																																																																																																							2
AAATC/ATTTG	9		1																																																																																																																					10
AAATG/ATTTC	12	1	1																																																																																																																					14
AAATT/AATTT	68	1	1																																																																																																																					70
AACAC/GTGTT	5																																																																																																																							5
AACAT/ATGTT	2																																																																																																																							2
AACCC/GGGTT	8																																																																																																																							8
AACCG/CGGTT	3																																																																																																																							3
AACCT/AGGTT	2	1																																																																																																																						3
AACGC/CGTTG	2																																																																																																																							2
AACGG/CCGTT	1																																																																																																																							1
AACTC/AGTTG	2																																																																																																																							2
AACTG/AGTTC	1																																																																																																																							1
AAGAC/CTTGT	5	1																																																																																																																						6
AAGAG/CTCTT	16	1	1																																																																																																																					18
AAGAT/ATCTT	2																																																																																																																							2
AAGCC/CTTGG	1																																																																																																																							1
AAGCT/AGCTT	1																																																																																																																							1
AAGGG/CCCTT	9	1																																																																																																																						10
AAGTC/ACTTG	4																																																																																																																							4
AAGTG/ACTTC	1																																																																																																																							1
AATAC/ATTGT	4																																																																																																																							4
AATAG/ATTCT	2	1																																																																																																																						3
AATAT/ATATT	34	2																																																																																																																						36
AATCC/ATTGG	7																																																																																																																							7
AATCT/AGATT	2																																																																																																																							2
AATGC/ATTGC	3	2																																																																																																																						5
AATGG/ATTCC	2	1																																																																																																																						3
AATGT/ACATT	1		1																																																																																																																					2
AATTC/AATTG	5	1																																																																																																																						6
ACACC/GGTGT	3																																																																																																																							3
ACACG/CGTGT	1		1																																																																																																																					2
ACACT/AGTGT	1	1																																																																																																																						2
ACAGC/CTGTG	1																																																																																																																							1
ACAGG/CCTGT	3																																																																																																																							3
ACAGT/ACTGT	10																																																																																																																							10
ACATC/ATGTG	4																																																																																																																							4
ACATG/ATGTC	3	1																																																																																																																						4
ACCAG/CTGGT	1	1																																																																																																																						2
ACCAT/ATGGT	7																																																																																																																							7
ACCCC/GGGGT	3																																																																																																																							3
ACCCG/CGGGT	1																																																																																																																							1
ACCCT/AGGGT	1	1																																																																																																																						2
ACCGG/CCGGT	1																																																																																																																							1
ACCGT/ACGGT	2	1																																																																																																																						3
ACCTC/AGGTG	1																																																																																																																							1
ACGAG/CGTCT	2	1																																																																																																																						3
ACGAT/ATCGT	1																																																																																																																							1
ACGCC/CGTGG	1																																																																																																																							1
ACGGC/CCGTG	1																																																																																																																							1
ACGGG/CCCGT	1	1																																																																																																																						2
ACTAG/AGTCT	5	1																																																																																																																						6
ACTAT/AGTAT	3																																																																																																																							3
ACTCC/AGTGG	1																																																																																																																							1
ACTCG/AGTCG		1																																																																																																																						1
ACTCT/AGAGT	1																																																																																																																							1
ACTGG/AGTCC		1																																																																																																																						1
AGAGC/CTCTG	1																																																																																																																							1
AGAGG/CCTCT	7		1																																																																																																																					8
AGATC/ATCTG		2																																																																																																																						2
AGATG/ATCTC	11	2	1																																																																																																																					14
AGCAT/ATGCT	2																																																																																																																							2
AGCCC/CTGGG	2																																																																																																																							2
AGCCG/CGGCT	1																																																																																																																							1
AGCGG/CCGCT	1																																																																																																																							1
AGCTC/AGCTG	6																																																																																																																							6
AGGAT/ATCCT	6																																																																																																																							6
AGGCG/CCTCG	1	1																																																																																																																						2
AGGGC/CCCTG	1																																																																																																																							1
AGGGG/CCCCT	8	1																																																																																																																						9
ATATC/ATATG	7																																																																																																																							7
ATCCC/ATGGG	5	1																																																																																																																						6
ATCGC/ATGCG	1																																																																																																																							1
AAAAAC/GTTTTT	4	1																																																																																																																						5
AAAAAG/CTTTTT	84	17	3																																																																																																																					104
AAAAAT/ATTTTT	78	13	3			1																																																																																																																		95
AAAACC/GGTTTT	1		1																																																																																																																					2
AAAAGC/CTTTTG	3	1	1																																																																																																																					5
AAAAGG/CCTTTT	7		1																																																																																																																					8
AAAAGT/ACTTTT	2																																																																																																																							2
AAAATC/ATTTTG		1																																																																																																																						1
AAAATG/ATTTTC	8																																																																																																																							8
AAAATT/AATTTT	13	1																																																																																																																						14
AAACAC/GTGTTT	1																																																																																																																							1
AAACAG/CTGTTT		1																																																																																																																						1
AAACCC/GGGTTT	5																																																																																																																							5
AAACGG/CCGTTT	1																																																																																																																							1
AAACTG/AGTTTC	1																																																																																																																							1
AAAGAC/CTTTGT	2																																																																																																																							2
AAAGAG/CTCTTT	8	2																																																																																																																						10
AAAGAT/ATCTTT	2																																																																																																																							2
AAAGGG/CCCTTT	2	2																																																																																																																						4
AAAGGT/ACCTTT	1																																																																																																																							1
AAAGTC/ACTTTG	1	1																																																																																																																						2
AAAGTG/ACTTTC	1																																																																																																																							1
AAATAG/ATTTCT	2																																																																																																																							2
AAATAT/ATATTT	3																																																																																																																							3
AAATCT/AGATTT	2																																																																																																																							2
AAATGG/ATTTCC	1	1																																																																																																																						2
AAATGT/ACATTT		1																																																																																																																						1
AAATTG/AATTTC	1																																																																																																																							1
AAATTT/AAATTT	3	2																																																																																																																						5
AACAAG/CTTGTT	4				1																																																																																																																			5
AACAAT/ATTGTT	1																																																																																																																							1
AACACC/GGTGTT	3																																																																																																																							3
AACAGC/CTGTTG	4		2																																																																																																																					6
AACAGG/CCTGTT	3																																																																																																																							3
AACATC/ATGTTG	3						1																																																																																																																	4
AACATG/ATGTTC	1																																																																																																																							1
AACCAC/GGTTGT	4																																																																																																																							4
AACCAT/ATGGTT	1																																																																																																																							1
AACCCC/GGGGTT	5																																																																																																																							5
AACCCG/CGGGTT	2																																																																																																																							2
AACCGC/CGGTTG	1																																																																																																																							1
AACCTC/AGGTTG	1																																																																																																																							1
AACCTG/AGGTTC	1																																																																																																																							1
AACGAC/CGTTGT	3																																																																																																																							3
AACGCC/CGTTGG		1																																																																																																																						1
AACGTC/ACGTTG	1																																																																																																																							1
AACTAC/AGTTGT	2																																																																																																																							2
AACTAT/AGTTAT	1																																																																																																																							1
AACTCC/AGTTGG	1																																																																																																																							1
AACTGC/AGTTGC	1																																																																																																																							1
AACTTC/AAGTTG	2																																																																																																																							2
AAGAAT/ATTCTT	1																																																																																																																							1
AAGACC/CTTGGT	1																																																																																																																							1
AAGACG/CGTCTT	3																																																																																																																							3
AAGAGG/CCTCTT	11	1																																																																																																																						12
AAGATG/ATCTTC	1	2																																																																																																																						3
AAGCAG/CTGCTT	3																																																																																																																							3
AAGCCG/CGGCTT	1	1																																																																																																																						2
AAGCGC/CGCTTG	1																																																																																																																							1
AAGCGG/CCGCTT	1																																																																																																																							1
AAGGAC/CCTTGT	1	1																																																																																																																						2
AAGGAG/CCTTCT	1																																																																																																																							1
AAGGCG/CCTTCG	1																																																																																																																							1
AAGGGC/CCCTTG	2																																																																																																																							2
AAGTAG/ACTTCT	1	1																																																																																																																						2
AAGTCC/ACTTGG	2																																																																																																																							2
AAGTGG/ACTTCC	1																																																																																																																							1
AATACC/ATTGGT	1																																																																																																																							1
AATAGT/ACTATT	3																																																																																																																							3
AATATT/AATATT	14																																																																																																																							14
AATCAC/ATTGTG	1																																																																																																																							1
AATCAT/ATGATT	4																																																																																																																							4
AATCCC/ATTGGG	3																																																																																																																							3
AATCGC/ATTGCG	1																																																																																																																							1
AATGAG/ATTCTC	3																																																																																																																							3
AATGCC/ATTGGC	1																																																																																																																							1
AATGGC/ATTGCC	1	1																																																																																																																						2
AATGGG/ATTCCC	1																																																																																																																							1
AATGTC/ACATTG	1																																																																																																																							1
AATGTG/ACATTC	2																																																																																																																							2
AATTAC/AATTGT	1																																																																																																																							1
AATTAG/AATTCT	1																																																																																																																							1
AATTAT/AATTAT	9	1																																																																																																																						10
AATTCC/AATTGG	1																																																																																																																							1
ACACAG/CTGTGT	1																																																																																																																							1
ACACAT/ATGTGT	3																																																																																																																							3
ACACCC/GGGTGT		1																																																																																																																						1
ACACGC/CGTGTG	1																																																																																																																							1
ACAGCC/CTGTGG	1																																																																																																																							1
ACAGCG/CGCTGT	1																																																																																																																							1
ACAGGG/CCCTGT	2																																																																																																																							2
ACAGTC/ACTGTG	1																																																																																																																							1
ACATAG/ATGTCT	1																																																																																																																							1
ACATAT/ATATGT	2																																																																																																																							2
ACATCT/AGATGT	1																																																																																																																							1
ACATGC/ATGTGC	1																																																																																																																							1
ACATGG/ATGTCC	2																																																																																																																							2
ACATGT/ACATGT	1	1																																																																																																																						2
ACCACG/CGTGGT	1																																																																																																																							1
ACCACT/AGTGGT	4													1																																																																																																										5
ACCAGC/CTGGTG	1	1																																																																																																																						2
ACCATC/ATGGTG	5																																																																																																																							5
ACCATG/ATGGTC	1																																																																																																																							1
ACCCCC/GGGGGT	1																																																																																																																							1
ACCCTC/AGGGTG	1																																																																																																																							1
ACCCTG/AGGGTC	1																																																																																																																							1
ACCGAG/CGGTCT	1																																																																																																																							1
ACCGCC/CGGTGG	3																																																																																																																							3
ACCGGG/CCCGGT		1																																																																																																																						1
ACCGTC/ACGGTG	1																																																																																																																							1
ACCTAT/AGGTAT	1																																																																																																																							1
ACCTCC/AGGTGG	1	1																																																																																																																						2
ACCTCG/AGGTCG	1																																																																																																																							1
ACCTGC/AGGTGC	1																																																																																																																							1
ACGACT/AGTCGT	1																																																																																																																							1
ACGAGC/CGTGCT	1																																																																																																																							1
ACGAGG/CCTCGT	5																																																																																																																							5
ACGATC/ATCGTG	2																																																																																																																							2
ACGATG/ATCGTC	9			1																																																																																																																				10
ACGCAG/CGTCTG	1																																																																																																																							1
ACGCGG/CCGCGT	1																																																																																																																							1
ACGCTC/AGCGTG	1																																																																																																																							1
ACGCTG/AGCGTC	2																																																																																																																							2
ACGGAG/CCGTCT	1																																																																																																																							1
ACGGCC/CCGTGG	3																																																																																																																							3
ACGTAG/ACGTCT		1																																																																																																																						1
ACTATC/AGTGAT	1																																																																																																																							1
ACTATG/AGTCAT	1																																																																																																																							1
ACTCAG/AGTCTG	1																																																																																																																							1
ACTCAT/AGTATG	1																																																																																																																							1
ACTCCC/AGTGGG	1																																																																																																																							1
ACTCTC/AGAGTG	1																																																																																																																							1
ACTGAT/AGTATC	1																																																																																																																							1
ACTGCC/AGTGGC	2	1																																																																																																																						3
ACTGCG/AGTCGC	2																																																																																																																							2
ACTGCT/AGCAGT	3																																																																																																																							3
ACTGGC/AGTGCC	1																																																																																																																							1
AGAGCC/CTCTGG	4																																																																																																																							4
AGAGCG/CGCTCT	1																																																																																																																							1
AGAGCT/AGCTCT	1	1																																																																																																																						2
AGAGGC/CCTCTG	1	1																																																																																																																						2
AGAGGG/CCCTCT	5	2																																																																																																																						7
AGATCG/ATCTCG	2																																																																																																																							2
AGATGC/ATCTGC	1																																																																																																																							1
AGCAGG/CCTGCT	3	1																																																																																																																						4
AGCATC/ATGCTG	3																																																																																																																							3
AGCCAT/ATGGCT	2																																																																																																																							2
AGCCCC/CTGGGG	1	1																																																																																																																						2
AGCCGC/CGGCTG	6	1																																																																																																																						7
AGCCGG/CCGGCT	4																																																																																																																							4
AGCCTC/AGGCTG	1																																																																																																																							1
AGCCTG/AGGCTC	4		1																																																																																																																					5
AGCGAT/ATCGCT	1	1																																																																																																																						2
AGCGCG/CGCGCT	1																																																																																																																							1
AGCGGC/CCGCTG	1	2																																																																																																																						3
AGCGGG/CCCGCT	2																																																																																																																							2
AGCTCC/AGCTGG	4	1																																																																																																																						5
AGCTGC/AGCTGC	1																																																																																																																							1
AGGATC/ATCCTG	1																																																																																																																							1
AGGATG/ATCCTC	9	2																																																																																																																						11
AGGCCC/CCTGGG	1																																																																																																																							1
AGGCGC/CCTGCG	1	1																																																																																																																						2
AGGCGG/CCGCCT	3																																																																																																																							3
AGGGAT/ATCCCT		1																																																																																																																						1
AGGGGG/CCCCCT	2																																																																																																																							2
ATATCC/ATATGG		1																																																																																																																						1
ATATCG/ATATCG	1																																																																																																																							1
ATATGC/ATATGC	1																																																																																																																							1
ATCCCC/ATGGGG	1																																																																																																																							1
ATCCCG/ATCGGG	2																																																																																																																							2
ATCGCC/ATGGCG	2																																																																																																																							2
ATCGGC/ATGCCG	2																																																																																																																							2
CCCGCG/CGCGGG	1																																																																																																																							1
