Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-1/megassr/results/hub_GCA_011420395.1/fasta/hub_GCA_011420395.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              271
Total size of examined sequences (bp):           37710759
Total number of identified SSRs:                 3481
Number of SSR containing sequences:              80
Number of sequences containing more than 1 SSR:  75
Number of SSRs present in compound formation:    317


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	210
2	760
3	570
4	404
5	912
6	625

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	19	13	12	6	4	6	4	5	2	2		2	1	1	2	1	1	1		1	1		2	1							1		1	1					1					1								1										1												1							1																																96
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	2		2	2		2	1	2		1			1		1																																																																																																	17
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		3		1	1			1	1					1			1	1		1								1				1										1																																																	1																						15
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	16	14	5	6	4	3	3	3	1	1	3		3	1	1	1		1					1	1			1		1								1	1														1																																																											1	82
AC	-	-	-	8	2	2	2		2	1					2			1	1			2		1																																																																																																										24
AG	-	-	-	30	16	11	2	6	4	2		1	1	1			1																																																																																																																	75
AT	-	-	-	99	23	20	11	7	13	3		1	1	1		1																																																																																																																		180
CA	-	-	-	13	6	2	1		1	1	1					1													1																																																																																																					27
CT	-	-	-	25	9	8	5	1	1	1	2		2		1	1																																																																																																																		56
GA	-	-	-	17	3	7	4	3	2	1	2	2	1																																																																																																																					42
GC	-	-	-	2																																																																																																																														2
GT	-	-	-	13	6	1	2	2					1		1	1								1				1																																																																																																						29
TA	-	-	-	120	39	13	12	9	3	3	1																																																																																																																							200
TC	-	-	-	30	24	11	10	3	4	2	1	1		1		2			1					2																																																																																																										92
TG	-	-	-	12	2	4	6		1		3		2					1	1		1																																																																																																													33
AAC	-	-	4	1	1																																																																																																																													6
AAG	-	-	16	6	3	1	1		1	1	1								1																																																																																																															31
AAT	-	-	17	7	3	2	1	2	2			1				1					1																																																																																																													37
ACA	-	-	2	1	1																																																																																																																													4
ACC	-	-	4																																																																																																																															4
ACT	-	-	2	3	1																						1																																																																																																							7
AGA	-	-	15	3	2	1																																																																																																																												21
AGC	-	-	2	2	1																																																																																																																													5
AGG	-	-	1				2																																																																																																																											3
AGT	-	-	2		2												1																																																																																																																	5
ATA	-	-	12	8	4							1																																																																																																																						25
ATC	-	-	2	2																																																																																																																														4
ATG	-	-	6	1	2																																																																																																																													9
ATT	-	-	11	4																																																																																																																														15
CAA	-	-	3	5		2	2					1																																																																																																																						13
CAC	-	-	3		1	1																																																																																																																												5
CAG	-	-	12			2		1																																																																																																																										15
CAT	-	-	4	2			1																																																																																																																											7
CCA	-	-	2		1																																																																																																																													3
CCG	-	-	1		1																																																																																																																													2
CCT	-	-	1	2			1	1																																																																																																																										5
CGA	-	-	1	1	1																																																																																																																													3
CGC	-	-	1																																																																																																																															1
CGG	-	-				1																																																																																																																												1
CGT	-	-	1	1																																																																																																																														2
CTA	-	-	5		1				1					1																																																																																																																				8
CTC	-	-	4								1																																																																																																																							5
CTG	-	-	5	3																																																																																																																														8
CTT	-	-	8	2	2	1		1	2																																																																																																																									16
GAA	-	-	8	2	2	1	2	1	1	2		1			1																																																																																																																			21
GAC	-	-	2	1		1																																																																																																																												4
GAG	-	-	3	1	1					1																																																																																																																								6
GAT	-	-	6	1	1	1							1			1																																																																																																																		11
GCA	-	-	2	3	1				1																																																																																																																									7
GCC	-	-	8	1																																																																																																																														9
GCG	-	-	3	1																																																																																																																														4
GCT	-	-	2	1																																																																																																																														3
GGA	-	-	3	1		1																																																																																																																												5
GGC	-	-	11	1																																																																																																																														12
GGT	-	-	4		1																																																																																																																													5
GTA	-	-	3																																	1																																																																																														4
GTC	-	-	2		1																																																																																																																													3
GTG	-	-	2	1																																																																																																																														3
GTT	-	-	4	3		1			1																																																																																																																									9
TAA	-	-	15	3	3			1																																																																																																																										22
TAC	-	-	4	2		1	2	1										1																																																																																																																11
TAG	-	-	1	1	1	1											1																1																																																																																																	6
TAT	-	-	13	9	1								1																																																																																																																					24
TCA	-	-	3	2	1	2																																																																																																																												8
TCC	-	-	3			2	3																																																																																																																											8
TCG	-	-	1																																																																																																																															1
TCT	-	-	6	3	2		1			1						1																																																																																																																		14
TGA	-	-	4	3				1																																																																																																																										8
TGC	-	-	4	4	4	1		1																																																																																																																										14
TGG	-	-	6	5	3		1																																																																																																																											15
TGT	-	-	2	2	2	1	1																																																																																																																											8
TTA	-	-	12	8	1	1	2		1				1																																																																																																																					26
TTC	-	-	7	6			3		2	2	1	1		2							1																																																																																																													25
TTG	-	-	1	3																																																																																																																														4
AAAG	-	17	9	2		1																																																																																																																												29
AAAT	-	14	4		2																																																																																																																													20
AAGA	-	5	1																																																																																																																															6
AAGG	-	1																																																																																																																																1
AATA	-	7	1	1																																																																																																																														9
AATC	-	3	1																																																																																																																															4
AATG	-	1		1																																																																																																																														2
AATT	-	17	2	1																																																																																																																														20
ACAT	-	3			1																																																																																																																													4
ACCG	-	1																																																																																																																																1
AGAA	-	6	1																																																																																																																															7
AGAT	-	1																																																																																																																																1
AGCA	-	1																																																																																																																																1
AGGA	-	1																																																																																																																																1
AGGG	-	1																																																																																																																																1
AGTG	-	1																																																																																																																																1
ATAA	-	9	2																																																																																																																															11
ATAC	-	2	1	1																																																																																																																														4
ATAG	-	2	1																																																																																																																															3
ATCA	-	3		2																																																																																																																														5
ATGA	-	2		1																																																																																																																														3
ATGG	-	2																																																																																																																																2
ATGT	-	3	2	1																																																																																																																														6
ATTA	-	5	1																																																																																																																															6
ATTT	-	8						1																																																																																																																										9
CAAA	-	1																																																																																																																																1
CAAG	-	1																																																																																																																																1
CAAT	-	1							1																																																																																																																									2
CACT	-	1																																																																																																																																1
CAGT	-	1																																																																																																																																1
CATA	-	3	1	2	1																																																																																																																													7
CCTA	-	2		1																																																																																																																														3
CCTG	-	1																																																																																																																																1
CTAC	-	1	1	1																																																																																																																														3
CTAT	-	2	1																																																																																																																															3
CTCA	-	1																																																																																																																																1
CTCC	-	1																																																																																																																																1
CTTC	-	2																																																																																																																																2
CTTT	-	4	7	1		1																																																																																																																												13
GAAA	-	3		1																																																																																																																														4
GAAG	-	1																																																																																																																																1
GAAT	-	1	1																																																																																																																															2
GAGC	-	1																																																																																																																																1
GAGT	-	1																																																																																																																																1
GATA	-	1																																																																																																																																1
GATG	-	1	1																																																																																																																															2
GATT	-		1		1																																																																																																																													2
GGAA	-		1																																																																																																																															1
GGAG	-	1																																																																																																																																1
GGAT	-	1																																																																																																																																1
GGCA	-	1																																																																																																																																1
GTAG	-		1																																																																																																																															1
GTAT	-	4				1																																																																																																																												5
GTCA	-	1																																																																																																																																1
GTCT	-					1																																																																																																																												1
GTGA	-		1																																																																																																																															1
GTTT	-		1																																																																																																																															1
TAAA	-	8	1																																																																																																																															9
TAAC	-	1			1																																																																																																																													2
TAAT	-	8	1																																																																																																																															9
TACA	-	10	1	2																																																																																																																														13
TACT	-	1																																																																																																																																1
TAGC	-	1																																																																																																																																1
TAGG	-	1																																																																																																																																1
TAGT	-	1																																																																																																																																1
TATG	-	3	2	1																																																																																																																														6
TATT	-	8		1																																																																																																																														9
TCAA	-	1	1																																																																																																																															2
TCAC	-	2																																																																																																																																2
TCAT	-	2																																																																																																																																2
TCCA	-	1																																																																																																																																1
TCCG	-	1																																																																																																																																1
TCTA	-	4		1																																																																																																																														5
TCTG	-			1																																																																																																																														1
TCTT	-	10	2																																																																																																																															12
TGAA	-	1																																																																																																																																1
TGAG	-	2																																																																																																																																2
TGAT	-	2	1																																																																																																																															3
TGCA	-	1																																																																																																																																1
TGTA	-	4	2	1	1																																																																																																																													8
TTAA	-	1	1																																																																																																																															2
TTAT	-	11	1																																																																																																																															12
TTCA	-	1																																																																																																																																1
TTCT	-	7												1																																																																																																																				8
TTGA	-	5	2																																																																																																																															7
TTGG	-						1																																																																																																																											1
TTTA	-	14	3	3																																																																																																																														20
TTTC	-	17	7	6	1	3		1																																																																																																																										35
AAAAC	6	1																																																																																																																																7
AAAAG	47	16	5	2	1																																																																																																																													71
AAAAT	27	10	4			1		1																																																																																																																										43
AAACC	2																																																																																																																																	2
AAAGA	20	5		2																																																																																																																														27
AAAGG	5																																																																																																																																	5
AAAGT	1																																																																																																																																	1
AAATA	10	2																																																																																																																																12
AAATC	1																																																																																																																																	1
AAATG	1																																																																																																																																	1
AAATT	3																																																																																																																																	3
AACAC		1																																																																																																																																1
AACTA	2																																																																																																																																	2
AAGAA	12	5	2																																																																																																																															19
AAGAG	1																																																																																																																																	1
AAGGA	3																																																																																																																																	3
AAGGG	2																																																																																																																																	2
AAGTA	1																																																																																																																																	1
AAGTC	1																																																																																																																																	1
AATAA	11	2		1																																																																																																																														14
AATAT	9	2																																																																																																																																11
AATCT		1																																																																																																																																1
AATTA	5																																																																																																																																	5
AATTC	1	1																																																																																																																																2
AATTT	2																																																																																																																																	2
ACAAC	1																																																																																																																																	1
ACACC	1																																																																																																																																	1
ACACG			1																																																																																																																															1
ACAGT	1																																																																																																																																	1
ACATA	1																																																																																																																																	1
ACATC	1																																																																																																																																	1
ACATG	2																																																																																																																																	2
ACCAA	1																																																																																																																																	1
ACCGT	1																																																																																																																																	1
ACCTG	1																																																																																																																																	1
ACGCA	1																																																																																																																																	1
ACTAG	1																																																																																																																																	1
ACTGT	1																																																																																																																																	1
AGAAA	14	2	1									1																																																																																																																						18
AGAAG	6																																																																																																																																	6
AGACA	1																																																																																																																																	1
AGACT		1																																																																																																																																1
AGAGA	2																																																																																																																																	2
AGAGC	1																																																																																																																																	1
AGATC		1																																																																																																																																1
AGATG	2																																																																																																																																	2
AGCAA			1																																																																																																																															1
AGCCC	1																																																																																																																																	1
AGCCG	1																																																																																																																																	1
AGCTA	1																																																																																																																																	1
AGGAA	1																																																																																																																																	1
AGGAT	1																																																																																																																																	1
AGGGA	2																																																																																																																																	2
AGGTG	1																																																																																																																																	1
AGTAC	2																																																																																																																																	2
AGTCA	1																																																																																																																																	1
AGTGT		1																																																																																																																																1
ATAAA	15																																																																																																																																	15
ATAAT	1																																																																																																																																	1
ATACC	2																																																																																																																																	2
ATAGG	2																																																																																																																																	2
ATAGT	1																																																																																																																																	1
ATATA	6																																																																																																																																	6
ATATC	1																																																																																																																																	1
ATATG	1																																																																																																																																	1
ATATT	6																																																																																																																																	6
ATCAC	1																																																																																																																																	1
ATCAT	1																																																																																																																																	1
ATCCC	2																																																																																																																																	2
ATCTA	1																																																																																																																																	1
ATCTC	1																																																																																																																																	1
ATGAT	2																																																																																																																																	2
ATGGG	1	1																																																																																																																																2
ATGTA	1																																																																																																																																	1
ATTAA	17																																																																																																																																	17
ATTCA	1																																																																																																																																	1
ATTTA	1																																																																																																																																	1
ATTTC	2																																																																																																																																	2
ATTTG	1																																																																																																																																	1
ATTTT	11	2	2																																																																																																																															15
CAAAA	1																																																																																																																																	1
CAAAC	1																																																																																																																																	1
CAAAG	2																																																																																																																																	2
CAAAT	2																																																																																																																																	2
CAAGA		1																																																																																																																																1
CAAGT	1																																																																																																																																	1
CAATA	2																																																																																																																																	2
CAATG	1																																																																																																																																	1
CAATT	1																																																																																																																																	1
CACAT	1																																																																																																																																	1
CACCC	1																																																																																																																																	1
CACGG	1																																																																																																																																	1
CACTT	1																																																																																																																																	1
CAGCC	1																																																																																																																																	1
CAGGA	1																																																																																																																																	1
CAGGT	1																																																																																																																																	1
CAGTA	1																																																																																																																																	1
CATAG	1																																																																																																																																	1
CATCT		1																																																																																																																																1
CATTT	1																																																																																																																																	1
CCAAA	1																																																																																																																																	1
CCAAC	1																																																																																																																																	1
CCACA	1																																																																																																																																	1
CCAGT		1																																																																																																																																1
CCATT		1																																																																																																																																1
CCCAA	2																																																																																																																																	2
CCCCT	2		1																																																																																																																															3
CCCGA	1																																																																																																																																	1
CCCTA	1																																																																																																																																	1
CCCTC	1																																																																																																																																	1
CCGGT	1																																																																																																																																	1
CCGTA	1																																																																																																																																	1
CCTAA		1																																																																																																																																1
CCTCT	1																																																																																																																																	1
CCTTC	1																																																																																																																																	1
CCTTT	1																																																																																																																																	1
CGATA	1																																																																																																																																	1
CGCCT	1																																																																																																																																	1
CGTCT	1	1																																																																																																																																2
CGTTG	1																																																																																																																																	1
CTAAA	1																																																																																																																																	1
CTATC	2																																																																																																																																	2
CTCAA	1																																																																																																																																	1
CTCAT	2																																																																																																																																	2
CTCCA	1																																																																																																																																	1
CTGAT		1																																																																																																																																1
CTGTC	1																																																																																																																																	1
CTTCC	2																																																																																																																																	2
CTTCT	1																																																																																																																																	1
CTTTC	2																																																																																																																																	2
CTTTG	1																																																																																																																																	1
CTTTT	19	2	1																																																																																																																															22
GAAAA	14	4																																																																																																																																18
GAAAG	4	1																																																																																																																																5
GAAAT	1		1																																																																																																																															2
GAACC	2																																																																																																																																	2
GAAGA	1																																																																																																																																	1
GAAGG	2																																																																																																																																	2
GAATG	1																																																																																																																																	1
GACCT	1																																																																																																																																	1
GACGG	1																																																																																																																																	1
GACTA	1																																																																																																																																	1
GAGAA	1																																																																																																																																	1
GAGAG	1																																																																																																																																	1
GAGAT		2																																																																																																																																2
GAGGA	1																																																																																																																																	1
GAGGC	1																																																																																																																																	1
GAGGG	1																																																																																																																																	1
GATAA	2																																																																																																																																	2
GATGA	1																																																																																																																																	1
GATGC	1																																																																																																																																	1
GATGG	1																																																																																																																																	1
GATTG	3																																																																																																																																	3
GCGTG	1																																																																																																																																	1
GCTGA	3																																																																																																																																	3
GCTTT	1																																																																																																																																	1
GGAAA	2																																																																																																																																	2
GGAAG		1																																																																																																																																1
GGAAT	1																																																																																																																																	1
GGAGA	1		1																																																																																																																															2
GGAGC	1																																																																																																																																	1
GGATT	1																																																																																																																																	1
GGCTC	1																																																																																																																																	1
GGGAA	1																																																																																																																																	1
GGGAC	1	1																																																																																																																																2
GGGAG	1																																																																																																																																	1
GGGAT	1																																																																																																																																	1
GGGGA	2																																																																																																																																	2
GGGTG	1																																																																																																																																	1
GGGTT	1																																																																																																																																	1
GGTAG		1																																																																																																																																1
GGTAT	1																																																																																																																																	1
GGTCT	1																																																																																																																																	1
GGTTG	1																																																																																																																																	1
GTACA	2																																																																																																																																	2
GTACT	1																																																																																																																																	1
GTATG	2																																																																																																																																	2
GTCCT	1																																																																																																																																	1
GTCGA		1																																																																																																																																1
GTCTA	2																																																																																																																																	2
GTCTC	1																																																																																																																																	1
GTCTG	1																																																																																																																																	1
GTCTT	1																																																																																																																																	1
GTGTA	1																																																																																																																																	1
GTTGA	1																																																																																																																																	1
GTTGG	1																																																																																																																																	1
GTTGT	2																																																																																																																																	2
TAAAA	13																																																																																																																																	13
TAAAC	1																																																																																																																																	1
TAAAT	4																																																																																																																																	4
TAACC	1																																																																																																																																	1
TAATA	3																																																																																																																																	3
TAATC	1																																																																																																																																	1
TAATG		1																																																																																																																																1
TAATT	7	1																																																																																																																																8
TACAA	1																																																																																																																																	1
TACCA	1																																																																																																																																	1
TACCC	1																																																																																																																																	1
TAGCA	1																																																																																																																																	1
TAGTA	2																																																																																																																																	2
TAGTT	1																																																																																																																																	1
TATAA	6																																																																																																																																	6
TATAC	1																																																																																																																																	1
TATAT	4																																																																																																																																	4
TATCA	1																																																																																																																																	1
TATGG	1																																																																																																																																	1
TATTA	8	1																																																																																																																																9
TATTT	16	2																																																																																																																																18
TCAAA	1																																																																																																																																	1
TCACA	1																																																																																																																																	1
TCAGC	1																																																																																																																																	1
TCATC	1																																																																																																																																	1
TCATT	1	1																																																																																																																																2
TCCAA	1																																																																																																																																	1
TCCCC	1																																																																																																																																	1
TCCTA	1																																																																																																																																	1
TCCTC	2																																																																																																																																	2
TCGCC		1																																																																																																																																1
TCGGT	1																																																																																																																																	1
TCGTT		1																																																																																																																																1
TCTAC	1																																																																																																																																	1
TCTAG	1																																																																																																																																	1
TCTAT	1	1																																																																																																																																2
TCTCC	1																																																																																																																																	1
TCTCT	2	2																																																																																																																																4
TCTTC	1																																																																																																																																	1
TCTTT	10	2						1																																																																																																																										13
TGAAA	1																																																																																																																																	1
TGACA	1	1																																																																																																																																2
TGAGA	1																																																																																																																																	1
TGAGC	2																																																																																																																																	2
TGATA	2																																																																																																																																	2
TGATT	2																																																																																																																																	2
TGCAT	1																																																																																																																																	1
TGCTG	1																																																																																																																																	1
TGGGT	2																																																																																																																																	2
TGTAC	2																																																																																																																																	2
TGTAT	1																																																																																																																																	1
TGTCG	1																																																																																																																																	1
TGTCT	1																																																																																																																																	1
TGTTA	1																																																																																																																																	1
TGTTG	1																																																																																																																																	1
TGTTT	1	1																																																																																																																																2
TTAAA	5																																																																																																																																	5
TTAAT	16																																																																																																																																	16
TTAGA	1																																																																																																																																	1
TTATA	2																																																																																																																																	2
TTATT	12	1																																																																																																																																13
TTCAG	1																																																																																																																																	1
TTCAT	2																																																																																																																																	2
TTCCC	1																																																																																																																																	1
TTCCT	3																																																																																																																																	3
TTCTT	8	2	1																																																																																																																															11
TTGAA	2																																																																																																																																	2
TTGAC	1																																																																																																																																	1
TTGCA	1		1																																																																																																																															2
TTGGG	1																																																																																																																																	1
TTGTC	1																																																																																																																																	1
TTGTT	2																																																																																																																																	2
TTTAA	7																																																																																																																																	7
TTTAG	1																																																																																																																																	1
TTTAT	17	3																																																																																																																																20
TTTCA	2																																																																																																																																	2
TTTCC	6																																																																																																																																	6
TTTCG	1																																																																																																																																	1
TTTCT	17	5	1																																																																																																																															23
TTTGA	2		1																																																																																																																															3
TTTGT	1																																																																																																																																	1
TTTTA	27	3	4	1																																																																																																																														35
TTTTC	36	9	3	1																																																																																																																														49
TTTTG	3	1																																																																																																																																4
AAAAAC	1																																																																																																																																	1
AAAAAG	21	3		1			1																																																																																																																											26
AAAAAT	14	7	1																																																																																																																															22
AAAACA	1		1																																																																																																																															2
AAAAGA	9	3																																																																																																																																12
AAAAGC	1																																																																																																																																	1
AAAAGG	1	1																																																																																																																																2
AAAATA	8	2																																																																																																																																10
AAAATC	1																																																																																																																																	1
AAAATG	1		1																																																																																																																															2
AAACAG		1																																																																																																																																1
AAACCA	1																																																																																																																																	1
AAAGAA	5																																																																																																																																	5
AAAGAC	1																																																																																																																																	1
AAAGAG	1	1																																																																																																																																2
AAAGGG		1																																																																																																																																1
AAAGGT	1																																																																																																																																	1
AAAGTG	1																																																																																																																																	1
AAATAA	5																																																																																																																																	5
AAATAG	1																																																																																																																																	1
AAATCC	1																																																																																																																																	1
AAATCT	1																																																																																																																																	1
AAATGA	1																																																																																																																																	1
AACACA	1																																																																																																																																	1
AACCAC	1																																																																																																																																	1
AACCCA	1																																																																																																																																	1
AACCCC	1																																																																																																																																	1
AACCTC	1																																																																																																																																	1
AACGGA	1																																																																																																																																	1
AAGAAA	4																																																																																																																																	4
AAGAAC	1		1																																																																																																																															2
AAGAGG		1																																																																																																																																1
AAGCCG		1																																																																																																																																1
AATAAA	1			1																																																																																																																														2
AATCTA	1																																																																																																																																	1
AATGAA	1																																																																																																																																	1
AATGAG	1																																																																																																																																	1
AATTAA	6																																																																																																																																	6
AATTTA	1																																																																																																																																	1
AATTTT	1	1																																																																																																																																2
ACAACC	1																																																																																																																																	1
ACAACT	2																																																																																																																																	2
ACAAGA	1																																																																																																																																	1
ACAATC	1																																																																																																																																	1
ACAGCA	1																																																																																																																																	1
ACCACT	1																																																																																																																																	1
ACCAGC	1																																																																																																																																	1
ACGACC	1																																																																																																																																	1
ACGTCA	1																																																																																																																																	1
AGAAAA	4	1																																																																																																																																5
AGAAAG												1																																																																																																																						1
AGACGG	1																																																																																																																																	1
AGAGAA	1																																																																																																																																	1
AGAGCG	1																																																																																																																																	1
AGAGCT	1																																																																																																																																	1
AGCCAT	1																																																																																																																																	1
AGCCCC	1																																																																																																																																	1
AGCGTC	1																																																																																																																																	1
AGGAAA	2																																																																																																																																	2
AGGAGC	1																																																																																																																																	1
AGGCGA	1																																																																																																																																	1
AGGCGC	1																																																																																																																																	1
AGGCGG	1																																																																																																																																	1
AGGGCA	2																																																																																																																																	2
AGGGTC	1																																																																																																																																	1
AGGTGC	1																																																																																																																																	1
AGTAGA		1																																																																																																																																1
AGTATC	1																																																																																																																																	1
AGTATG	1																																																																																																																																	1
AGTGAG	1																																																																																																																																	1
AGTGGC		1																																																																																																																																1
ATAAAA	5	1																																																																																																																																6
ATAAAT	1																																																																																																																																	1
ATAACT	1																																																																																																																																	1
ATAATC	1																																																																																																																																	1
ATAATT	1																																																																																																																																	1
ATAGTC	1																																																																																																																																	1
ATATAC	2																																																																																																																																	2
ATATTA	1																																																																																																																																	1
ATCCAT	1																																																																																																																																	1
ATCCCA	1																																																																																																																																	1
ATCCTC	2																																																																																																																																	2
ATCGCC	1																																																																																																																																	1
ATCGTG	1																																																																																																																																	1
ATGAAC	1																																																																																																																																	1
ATGACG	1																																																																																																																																	1
ATGGTC	1																																																																																																																																	1
ATGTAC	1																																																																																																																																	1
ATGTAG	1																																																																																																																																	1
ATGTCT	1																																																																																																																																	1
ATTAAT	3																																																																																																																																	3
ATTATA	2																																																																																																																																	2
ATTCAC	1																																																																																																																																	1
ATTTAA	2	4																																																																																																																																6
ATTTTC	1																																																																																																																																	1
ATTTTT	2																																																																																																																																	2
CAACAC	1																																																																																																																																	1
CAACAG	2																																																																																																																																	2
CAACCC	1																																																																																																																																	1
CAAGAA	2																																																																																																																																	2
CACACC		1																																																																																																																																1
CACCAA	1																																																																																																																																	1
CAGAAG	1																																																																																																																																	1
CAGATC	1																																																																																																																																	1
CAGCAA	1	1																																																																																																																																2
CAGCCA	1																																																																																																																																	1
CAGCCC		1																																																																																																																																1
CAGCCG	1																																																																																																																																	1
CAGGAA	1																																																																																																																																	1
CAGGCT		1																																																																																																																																1
CATAAT	1																																																																																																																																	1
CATAGC	1																																																																																																																																	1
CATCAA	1																																																																																																																																	1
CATCAC	1																																																																																																																																	1
CATCAG	1																																																																																																																																	1
CATCGG	1																																																																																																																																	1
CATCGT	1																																																																																																																																	1
CATGTG	1																																																																																																																																	1
CATTTT	1																																																																																																																																	1
CCAAGA	1																																																																																																																																	1
CCACAA	1																																																																																																																																	1
CCACCT		1																																																																																																																																1
CCACGG	1																																																																																																																																	1
CCATGT	1																																																																																																																																	1
CCATTA	1																																																																																																																																	1
CCATTC	1																																																																																																																																	1
CCCCAC	1																																																																																																																																	1
CCCCCT	1																																																																																																																																	1
CCCTCT	1																																																																																																																																	1
CCCTGC	1																																																																																																																																	1
CCGAGA	1																																																																																																																																	1
CCGCGC	1																																																																																																																																	1
CCTATC	1																																																																																																																																	1
CCTCTC	1																																																																																																																																	1
CCTCTG		1																																																																																																																																1
CCTTTT	1																																																																																																																																	1
CGAAGC	1																																																																																																																																	1
CGACCT	1																																																																																																																																	1
CGAGGA	1																																																																																																																																	1
CGATAG		1																																																																																																																																1
CGATCA	1																																																																																																																																	1
CGATGA		1																																																																																																																																1
CGCAGC	1																																																																																																																																	1
CGGAGC	1																																																																																																																																	1
CGGCAG		1																																																																																																																																1
CGGCGC	1																																																																																																																																	1
CGGCTC	1																																																																																																																																	1
CGGGTT	1																																																																																																																																	1
CGTCCG	1																																																																																																																																	1
CGTCCT	1																																																																																																																																	1
CTACCA	1																																																																																																																																	1
CTATAC	1																																																																																																																																	1
CTCAGA	1																																																																																																																																	1
CTCATC	2																																																																																																																																	2
CTCCCG	1																																																																																																																																	1
CTCTTC	1																																																																																																																																	1
CTGCCG		1																																																																																																																																1
CTGCGA	1																																																																																																																																	1
CTGCTA	2																																																																																																																																	2
CTGGAG	1																																																																																																																																	1
CTGGCT	3																																																																																																																																	3
CTTCCT	1																																																																																																																																	1
CTTCTA	1																																																																																																																																	1
CTTTTA	1																																																																																																																																	1
CTTTTT	5	2																																																																																																																																7
GAAAAA	2																																																																																																																																	2
GAAAAG	1																																																																																																																																	1
GAAAGG	1																																																																																																																																	1
GAAATG	1		1																																																																																																																															2
GAAGAC	1																																																																																																																																	1
GAAGAG	4																																																																																																																																	4
GAAGGA	1																																																																																																																																	1
GAAGTG	1																																																																																																																																	1
GAATTA	1																																																																																																																																	1
GACGAA	1																																																																																																																																	1
GACGAG	2																																																																																																																																	2
GACGAT	1																																																																																																																																	1
GACGCA	1																																																																																																																																	1
GACTAC	1																																																																																																																																	1
GAGAAA	2																																																																																																																																	2
GAGAAG	1																																																																																																																																	1
GAGCAG	1																																																																																																																																	1
GAGCCT		1																																																																																																																																1
GAGGAT	1	1																																																																																																																																2
GAGGCG	1																																																																																																																																	1
GAGGGA	2																																																																																																																																	2
GAGGTG	1																																																																																																																																	1
GAGTCG	1																																																																																																																																	1
GAGTGG	1																																																																																																																																	1
GATATC	1																																																																																																																																	1
GATCCT	1																																																																																																																																	1
GATGAA		1																																																																																																																																1
GATGAG	1																																																																																																																																	1
GATGGT	1																																																																																																																																	1
GATGTT	1																																																																																																																																	1
GATTAT	1																																																																																																																																	1
GATTGG	1																																																																																																																																	1
GCAGCC	1																																																																																																																																	1
GCATCA	1																																																																																																																																	1
GCATCG	1																																																																																																																																	1
GCCACG	1																																																																																																																																	1
GCCATT	1																																																																																																																																	1
GCCGGG	1																																																																																																																																	1
GCCTGA	2		1																																																																																																																															3
GCCTGT	1																																																																																																																																	1
GCGATG	1																																																																																																																																	1
GCGCAG	1																																																																																																																																	1
GCGCTC	1																																																																																																																																	1
GCGGCA	1																																																																																																																																	1
GCTAGA		1																																																																																																																																1
GCTCCC	1																																																																																																																																	1
GCTCCT			1																																																																																																																															1
GCTCGG	1	1																																																																																																																																2
GCTCTC	1																																																																																																																																	1
GCTGCA	1																																																																																																																																	1
GCTGCG	1																																																																																																																																	1
GCTGGA	1																																																																																																																																	1
GCTGGT		1																																																																																																																																1
GCTTCC	1																																																																																																																																	1
GCTTCT	1																																																																																																																																	1
GCTTTT	1																																																																																																																																	1
GGACAG	1																																																																																																																																	1
GGACTT	1																																																																																																																																	1
GGAGAA	1																																																																																																																																	1
GGAGAG		1																																																																																																																																1
GGAGCC	1																																																																																																																																	1
GGAGGG	1																																																																																																																																	1
GGATTG	1																																																																																																																																	1
GGCATT	1																																																																																																																																	1
GGCGGA	1																																																																																																																																	1
GGCGGT	1																																																																																																																																	1
GGCTCA	1																																																																																																																																	1
GGCTCC	1																																																																																																																																	1
GGCTCT	1																																																																																																																																	1
GGCTGC	2	1																																																																																																																																3
GGGACC		1																																																																																																																																1
GGGATC	1																																																																																																																																	1
GGGGAT	1																																																																																																																																	1
GGGGGA	1																																																																																																																																	1
GGGTTG	1																																																																																																																																	1
GGTGAG	1																																																																																																																																	1
GGTGGC	2																																																																																																																																	2
GGTTAT	1																																																																																																																																	1
GGTTTG	1																																																																																																																																	1
GTAAAA	1																																																																																																																																	1
GTACAT		1																																																																																																																																1
GTAGTG	1																																																																																																																																	1
GTCAAA	1																																																																																																																																	1
GTCATG	1																																																																																																																																	1
GTCCAT	1																																																																																																																																	1
GTCGCA	1																																																																																																																																	1
GTGCTC	1																																																																																																																																	1
GTGGCA	1																																																																																																																																	1
GTGGCC	1																																																																																																																																	1
GTGGTT	2																																																																																																																																	2
GTGTCT	1																																																																																																																																	1
GTGTGC	1																																																																																																																																	1
GTGTTG	1																																																																																																																																	1
GTTCCT	1																																																																																																																																	1
GTTGAA	1																																																																																																																																	1
GTTGCA	1																																																																																																																																	1
GTTGGC		1																																																																																																																																1
GTTGGG	1																																																																																																																																	1
GTTGTC	1																																																																																																																																	1
GTTTGG	1																																																																																																																																	1
TAAAAA	1	1	1																																																																																																																															3
TAAAAT	3																																																																																																																																	3
TAATAT	1																																																																																																																																	1
TAATTA	3																																																																																																																																	3
TAATTG	1																																																																																																																																	1
TACACA	1																																																																																																																																	1
TACATT	1																																																																																																																																	1
TACTAT	1	1																																																																																																																																2
TAGTGA	1																																																																																																																																	1
TAGTGG	1																																																																																																																																	1
TATAAT	1	1																																																																																																																																2
TATCTT	1																																																																																																																																	1
TATTAA	1																																																																																																																																	1
TATTTC	1																																																																																																																																	1
TATTTT	8																																																																																																																																	8
TCAATG	1																																																																																																																																	1
TCACAT	1																																																																																																																																	1
TCAGCC	1																																																																																																																																	1
TCAGGT	1																																																																																																																																	1
TCATCC		1																																																																																																																																1
TCATCG	2	1																																																																																																																																3
TCATTC	1																																																																																																																																	1
TCCAAG	1																																																																																																																																	1
TCCAAT	1																																																																																																																																	1
TCCAGC	1	1																																																																																																																																2
TCCCTC	1																																																																																																																																	1
TCCCTG	1																																																																																																																																	1
TCCTCA	1	1																																																																																																																																2
TCCTCG	1																																																																																																																																	1
TCGCAA	1																																																																																																																																	1
TCGCTA	1																																																																																																																																	1
TCGCTG	1																																																																																																																																	1
TCGGGA	1																																																																																																																																	1
TCGGGC	1																																																																																																																																	1
TCGTCA	2																																																																																																																																	2
TCTACG	1																																																																																																																																	1
TCTGGA		1																																																																																																																																1
TCTGGC	1																																																																																																																																	1
TCTTCC	3																																																																																																																																	3
TCTTCG	1																																																																																																																																	1
TCTTTA	1																																																																																																																																	1
TCTTTC	1																																																																																																																																	1
TCTTTG	1																																																																																																																																	1
TCTTTT	5	1																																																																																																																																6
TGAAAC	1																																																																																																																																	1
TGAAGA	1	1																																																																																																																																2
TGACGA	1																																																																																																																																	1
TGACGC	1																																																																																																																																	1
TGAGAA	1																																																																																																																																	1
TGAGCG	1																																																																																																																																	1
TGAGGA	1																																																																																																																																	1
TGATGT	1																																																																																																																																	1
TGATTA	1																																																																																																																																	1
TGCAGA	1																																																																																																																																	1
TGCATA	1																																																																																																																																	1
TGCCAC		1																																																																																																																																1
TGCGCT	1																																																																																																																																	1
TGCGGT	1																																																																																																																																	1
TGCTGG	1																																																																																																																																	1
TGCTGT	1																																																																																																																																	1
TGCTTC	1																																																																																																																																	1
TGCTTT	2																																																																																																																																	2
TGGCAT	1																																																																																																																																	1
TGGGTT	2																																																																																																																																	2
TGGTAG	1																																																																																																																																	1
TGGTGA	1																																																																																																																																	1
TGTATA	1																																																																																																																																	1
TGTCCT	1																																																																																																																																	1
TGTCGT		1																																																																																																																																1
TGTGAC	1																																																																																																																																	1
TGTGTA	1																																																																																																																																	1
TGTTGC	1																																																																																																																																	1
TGTTTT	1																																																																																																																																	1
TTAAAT		1																																																																																																																																1
TTAATA	11																																																																																																																																	11
TTAATT	1																																																																																																																																	1
TTACTA	1																																																																																																																																	1
TTATAT	1																																																																																																																																	1
TTATTT	2																																																																																																																																	2
TTCAAC	1																																																																																																																																	1
TTCCTC	1																																																																																																																																	1
TTCGGG	1																																																																																																																																	1
TTCTCT	1																																																																																																																																	1
TTCTGC	1																																																																																																																																	1
TTCTTT	4	3																																																																																																																																7
TTGATG							1																																																																																																																											1
TTGCCA		1																																																																																																																																1
TTGGGT	1																																																																																																																																	1
TTGTTA	1																																																																																																																																	1
TTTAAA		1																																																																																																																																1
TTTAAT	1																																																																																																																																	1
TTTATA	1																																																																																																																																	1
TTTATT	9	2																																																																																																																																11
TTTCAT	1																																																																																																																																	1
TTTCCC	1																																																																																																																																	1
TTTCTA	1																																																																																																																																	1
TTTCTC	1																																																																																																																																	1
TTTCTT	7	1																																																																																																																																8
TTTGTT	1																																																																																																																																	1
TTTTAA	2																																																																																																																																	2
TTTTAT	10	2	2																																																																																																																															14
TTTTCC	1																																																																																																																																	1
TTTTCT	9	5																																																																																																																																14
TTTTGG				1																																																																																																																														1
TTTTTA	12	1																																																																																																																																13
TTTTTC	9	2																																																																																																																																11

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	27	29	26	11	10	10	7	8	5	3	1	5	1	4	3	2	2	1	1	1	1		2	2	1			1		1	1		1	1				1	2					1								1	1									1												1							1																															1	178
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	5		3	3		2	2	3		1			2		1	1	1		1								1				1										1																																																	1																						32
AC/GT	-	-	-	46	16	9	11	2	4	2	4		3		3	2		2	2		1	2		2				1	1																																																																																																					113
AG/CT	-	-	-	102	52	37	21	13	11	6	5	4	4	2	1	3	1		1					2																																																																																																										265
AT/AT	-	-	-	219	62	33	23	16	16	6	1	1	1	1		1																																																																																																																		380
CG/CG	-	-	-	2																																																																																																																														2
AAC/GTT	-	-	16	15	4	4	3		1			1																																																																																																																						44
AAG/CTT	-	-	60	22	11	4	7	2	6	6	2	2		2	1	1			1		1																																																																																																													128
AAT/ATT	-	-	80	39	12	3	3	3	3			2	2			1					1																																																																																																													149
ACC/GGT	-	-	21	6	6	1	1																																																																																																																											35
ACG/CGT	-	-	7	3	2	1																																																																																																																												13
ACT/AGT	-	-	17	6	5	2	2	1	1					1			2	1									1						1			1																																																																																														41
AGC/CTG	-	-	27	13	6	3		2	1																																																																																																																									52
AGG/CCT	-	-	15	4	1	3	6	1		1	1																																																																																																																							32
ATC/ATG	-	-	25	11	4	3	1	1					1			1																																																																																																																		47
CCG/CGG	-	-	24	3	1	1																																																																																																																												29
AAAC/GTTT	-	1	1																																																																																																																															2
AAAG/CTTT	-	69	27	10	1	5		1						1																																																																																																																				114
AAAT/ATTT	-	79	12	5	2			1																																																																																																																										99
AACC/GGTT	-						1																																																																																																																											1
AACT/AGTT	-	2			1																																																																																																																													3
AAGC/CTTG	-	2																																																																																																																																2
AAGG/CCTT	-	5	1																																																																																																																															6
AAGT/ACTT	-	1																																																																																																																																1
AATC/ATTG	-	15	6	2	1				1																																																																																																																									25
AATG/ATTC	-	8	1	2																																																																																																																														11
AATT/AATT	-	31	5	1																																																																																																																														37
ACAG/CTGT	-			1		1																																																																																																																												2
ACAT/ATGT	-	32	9	8	3	1																																																																																																																												53
ACCG/CGGT	-	1																																																																																																																																1
ACCT/AGGT	-	4	2	2																																																																																																																														8
ACGG/CCGT	-	1																																																																																																																																1
ACTC/AGTG	-	8	1																																																																																																																															9
ACTG/AGTC	-	2																																																																																																																																2
AGAT/ATCT	-	10	2	1																																																																																																																														13
AGCG/CGCT	-	1																																																																																																																																1
AGCT/AGCT	-	1																																																																																																																																1
AGGC/CCTG	-	2																																																																																																																																2
AGGG/CCCT	-	3																																																																																																																																3
ATCC/ATGG	-	5	1																																																																																																																															6
ATGC/ATGC	-	1																																																																																																																																1
AAAAC/GTTTT	14	3																																																																																																																																17
AAAAG/CTTTT	197	52	14	5	1			1				1																																																																																																																						271
AAAAT/ATTTT	159	25	10	2		1		1																																																																																																																										198
AAACC/GGTTT	5																																																																																																																																	5
AAACG/CGTTT	1	1																																																																																																																																2
AAACT/AGTTT	6																																																																																																																																	6
AAAGC/CTTTG	4		1																																																																																																																															5
AAAGG/CCTTT	27	1																																																																																																																																28
AAAGT/ACTTT	2																																																																																																																																	2
AAATC/ATTTG	9		1																																																																																																																															10
AAATG/ATTTC	11	1	1																																																																																																																															13
AAATT/AATTT	67	1																																																																																																																																68
AACAC/GTGTT	4	1																																																																																																																																5
AACAT/ATGTT	2																																																																																																																																	2
AACCC/GGGTT	9																																																																																																																																	9
AACCG/CGGTT	3																																																																																																																																	3
AACCT/AGGTT	1	1																																																																																																																																2
AACGC/CGTTG	2																																																																																																																																	2
AACTC/AGTTG	2																																																																																																																																	2
AACTG/AGTTC	1																																																																																																																																	1
AAGAC/CTTGT	4	1																																																																																																																																5
AAGAG/CTCTT	15	2																																																																																																																																17
AAGAT/ATCTT	2																																																																																																																																	2
AAGCT/AGCTT	1																																																																																																																																	1
AAGGG/CCCTT	11	1																																																																																																																																12
AAGTC/ACTTG	4																																																																																																																																	4
AAGTG/ACTTC	1																																																																																																																																	1
AATAC/ATTGT	4																																																																																																																																	4
AATAG/ATTCT	1	1																																																																																																																																2
AATAT/ATATT	45	3																																																																																																																																48
AATCC/ATTGG	5																																																																																																																																	5
AATCT/AGATT	3	1																																																																																																																																4
AATGC/ATTGC	3		1																																																																																																																															4
AATGG/ATTCC	2	1																																																																																																																																3
AATGT/ACATT	1	1																																																																																																																																2
AATTC/AATTG	5	1																																																																																																																																6
ACACC/GGTGT	2																																																																																																																																	2
ACACG/CGTGT	1		1																																																																																																																															2
ACACT/AGTGT	1	1																																																																																																																																2
ACAGC/CTGTG	1																																																																																																																																	1
ACAGG/CCTGT	3																																																																																																																																	3
ACAGT/ACTGT	10																																																																																																																																	10
ACATC/ATGTG	4																																																																																																																																	4
ACATG/ATGTC	3	1																																																																																																																																4
ACCAG/CTGGT	2																																																																																																																																	2
ACCAT/ATGGT	7																																																																																																																																	7
ACCCC/GGGGT	2																																																																																																																																	2
ACCCG/CGGGT	1																																																																																																																																	1
ACCCT/AGGGT	2	1																																																																																																																																3
ACCGG/CCGGT	1																																																																																																																																	1
ACCGT/ACGGT	2																																																																																																																																	2
ACCTC/AGGTG	1																																																																																																																																	1
ACCTG/AGGTC	3																																																																																																																																	3
ACGAG/CGTCT	2	1																																																																																																																																3
ACGAT/ATCGT	1																																																																																																																																	1
ACGCC/CGTGG	1																																																																																																																																	1
ACGGC/CCGTG	1																																																																																																																																	1
ACGGG/CCCGT	2	1																																																																																																																																3
ACTAG/AGTCT	5	1																																																																																																																																6
ACTAT/AGTAT	4																																																																																																																																	4
ACTCC/AGTGG	1																																																																																																																																	1
ACTCG/AGTCG		1																																																																																																																																1
ACTCT/AGAGT	1																																																																																																																																	1
ACTGG/AGTCC		1																																																																																																																																1
AGAGC/CTCTG	1																																																																																																																																	1
AGAGG/CCTCT	7		1																																																																																																																															8
AGATC/ATCTG		2																																																																																																																																2
AGATG/ATCTC	8	3																																																																																																																																11
AGCAT/ATGCT	2																																																																																																																																	2
AGCCC/CTGGG	2																																																																																																																																	2
AGCCG/CGGCT	2																																																																																																																																	2
AGCGG/CCGCT	1																																																																																																																																	1
AGCTC/AGCTG	6																																																																																																																																	6
AGGAT/ATCCT	6																																																																																																																																	6
AGGCG/CCTCG	2	1																																																																																																																																3
AGGGG/CCCCT	8		1																																																																																																																															9
ATATC/ATATG	8																																																																																																																																	8
ATCCC/ATGGG	5	1																																																																																																																																6
ATCGC/ATGCG	1																																																																																																																																	1
AAAAAC/GTTTTT	4		1																																																																																																																															5
AAAAAG/CTTTTT	84	21		1			1																																																																																																																											107
AAAAAT/ATTTTT	77	16	4	1																																																																																																																														98
AAAACC/GGTTTT	1			1																																																																																																																														2
AAAAGC/CTTTTG	4																																																																																																																																	4
AAAAGG/CCTTTT	6	1																																																																																																																																7
AAAAGT/ACTTTT	2																																																																																																																																	2
AAAATC/ATTTTG	1																																																																																																																																	1
AAAATG/ATTTTC	6		1																																																																																																																															7
AAAATT/AATTTT	14	1																																																																																																																																15
AAACAC/GTGTTT	1																																																																																																																																	1
AAACAG/CTGTTT		1																																																																																																																																1
AAACCC/GGGTTT	6																																																																																																																																	6
AAACGG/CCGTTT	1																																																																																																																																	1
AAACTG/AGTTTC	1																																																																																																																																	1
AAAGAC/CTTTGT	2																																																																																																																																	2
AAAGAG/CTCTTT	7	1										1																																																																																																																						9
AAAGAT/ATCTTT	2																																																																																																																																	2
AAAGGG/CCCTTT	2	1																																																																																																																																3
AAAGGT/ACCTTT	1																																																																																																																																	1
AAAGTC/ACTTTG	1																																																																																																																																	1
AAAGTG/ACTTTC	1																																																																																																																																	1
AAATAG/ATTTCT	3																																																																																																																																	3
AAATAT/ATATTT	3																																																																																																																																	3
AAATCC/ATTTGG	1																																																																																																																																	1
AAATCT/AGATTT	2																																																																																																																																	2
AAATGG/ATTTCC	1		1																																																																																																																															2
AAATGT/ACATTT	1																																																																																																																																	1
AAATTT/AAATTT	3	6																																																																																																																																9
AACAAG/CTTGTT	4		1																																																																																																																															5
AACAAT/ATTGTT	1																																																																																																																																	1
AACACC/GGTGTT	3																																																																																																																																	3
AACAGC/CTGTTG	6	1																																																																																																																																7
AACAGG/CCTGTT	2																																																																																																																																	2
AACATC/ATGTTG	3						1																																																																																																																											4
AACATG/ATGTTC	1																																																																																																																																	1
AACCAC/GGTTGT	5																																																																																																																																	5
AACCAT/ATGGTT	1																																																																																																																																	1
AACCCC/GGGGTT	4																																																																																																																																	4
AACCCG/CGGGTT	2																																																																																																																																	2
AACCGC/CGGTTG	1																																																																																																																																	1
AACCTC/AGGTTG	1																																																																																																																																	1
AACCTG/AGGTTC	1																																																																																																																																	1
AACGAC/CGTTGT	1	1																																																																																																																																2
AACGCC/CGTTGG		1																																																																																																																																1
AACGTC/ACGTTG	1																																																																																																																																	1
AACTAC/AGTTGT	2																																																																																																																																	2
AACTAT/AGTTAT	1																																																																																																																																	1
AACTGC/AGTTGC	1																																																																																																																																	1
AACTTC/AAGTTG	2																																																																																																																																	2
AAGACC/CTTGGT	1																																																																																																																																	1
AAGACG/CGTCTT	3																																																																																																																																	3
AAGAGG/CCTCTT	10	1																																																																																																																																11
AAGATG/ATCTTC	1	2																																																																																																																																3
AAGCAG/CTGCTT	4																																																																																																																																	4
AAGCCG/CGGCTT	1	1																																																																																																																																2
AAGCGC/CGCTTG	1																																																																																																																																	1
AAGCGG/CCGCTT	1																																																																																																																																	1
AAGGAC/CCTTGT	1																																																																																																																																	1
AAGGAG/CCTTCT	3																																																																																																																																	3
AAGGCG/CCTTCG	1																																																																																																																																	1
AAGGGC/CCCTTG	2																																																																																																																																	2
AAGTAG/ACTTCT	1	1																																																																																																																																2
AAGTCC/ACTTGG	2																																																																																																																																	2
AAGTGG/ACTTCC	1																																																																																																																																	1
AATAGT/ACTATT	2	1																																																																																																																																3
AATATT/AATATT	17																																																																																																																																	17
AATCAC/ATTGTG	1																																																																																																																																	1
AATCAT/ATGATT	4																																																																																																																																	4
AATCCC/ATTGGG	3																																																																																																																																	3
AATCGC/ATTGCG	1																																																																																																																																	1
AATGAG/ATTCTC	3																																																																																																																																	3
AATGCC/ATTGGC	2																																																																																																																																	2
AATGGC/ATTGCC	1	1																																																																																																																																2
AATGGG/ATTCCC	1																																																																																																																																	1
AATGGT/ACCATT	1																																																																																																																																	1
AATGTC/ACATTG	1																																																																																																																																	1
AATGTG/ACATTC	2																																																																																																																																	2
AATTAC/AATTGT	1																																																																																																																																	1
AATTAG/AATTCT	1																																																																																																																																	1
AATTAT/AATTAT	7	1																																																																																																																																8
AATTCC/AATTGG	1																																																																																																																																	1
ACACAG/CTGTGT	1																																																																																																																																	1
ACACAT/ATGTGT	2																																																																																																																																	2
ACACCC/GGGTGT		1																																																																																																																																1
ACACGC/CGTGTG	1																																																																																																																																	1
ACAGCC/CTGTGG	1																																																																																																																																	1
ACAGCG/CGCTGT	1																																																																																																																																	1
ACAGGC/CCTGTG	1																																																																																																																																	1
ACAGGG/CCCTGT	2																																																																																																																																	2
ACAGTC/ACTGTG	1																																																																																																																																	1
ACATAG/ATGTCT	1																																																																																																																																	1
ACATAT/ATATGT	3																																																																																																																																	3
ACATCT/AGATGT	1																																																																																																																																	1
ACATGC/ATGTGC	1																																																																																																																																	1
ACATGG/ATGTCC	2																																																																																																																																	2
ACATGT/ACATGT	1	1																																																																																																																																2
ACCACG/CGTGGT	1																																																																																																																																	1
ACCACT/AGTGGT	5																																																																																																																																	5
ACCAGC/CTGGTG	2	1																																																																																																																																3
ACCATC/ATGGTG	3																																																																																																																																	3
ACCATG/ATGGTC	2																																																																																																																																	2
ACCCCC/GGGGGT	1																																																																																																																																	1
ACCCTC/AGGGTG	1																																																																																																																																	1
ACCCTG/AGGGTC	1																																																																																																																																	1
ACCGAG/CGGTCT	1																																																																																																																																	1
ACCGCC/CGGTGG	3																																																																																																																																	3
ACCGGG/CCCGGT		1																																																																																																																																1
ACCTAT/AGGTAT	1																																																																																																																																	1
ACCTCC/AGGTGG	1	1																																																																																																																																2
ACCTCG/AGGTCG	1																																																																																																																																	1
ACCTGC/AGGTGC	1																																																																																																																																	1
ACGACT/AGTCGT	1																																																																																																																																	1
ACGAGC/CGTGCT	1																																																																																																																																	1
ACGAGG/CCTCGT	5																																																																																																																																	5
ACGATC/ATCGTG	2																																																																																																																																	2
ACGATG/ATCGTC	8	2																																																																																																																																10
ACGCAG/CGTCTG	1																																																																																																																																	1
ACGCGG/CCGCGT	1																																																																																																																																	1
ACGCTC/AGCGTG	1																																																																																																																																	1
ACGCTG/AGCGTC	2																																																																																																																																	2
ACGGAG/CCGTCT	1																																																																																																																																	1
ACGGCC/CCGTGG	3																																																																																																																																	3
ACGTAG/ACGTCT	1																																																																																																																																	1
ACTATC/AGTGAT	1																																																																																																																																	1
ACTATG/AGTCAT	1																																																																																																																																	1
ACTCAG/AGTCTG	1																																																																																																																																	1
ACTCAT/AGTATG	1																																																																																																																																	1
ACTCCC/AGTGGG	1																																																																																																																																	1
ACTCCG/AGTCGG	1																																																																																																																																	1
ACTCTC/AGAGTG	1																																																																																																																																	1
ACTGAT/AGTATC	1																																																																																																																																	1
ACTGCC/AGTGGC	1	2																																																																																																																																3
ACTGCG/AGTCGC	2																																																																																																																																	2
ACTGCT/AGCAGT	2																																																																																																																																	2
AGAGCC/CTCTGG	5																																																																																																																																	5
AGAGCG/CGCTCT	2																																																																																																																																	2
AGAGCT/AGCTCT	1	1																																																																																																																																2
AGAGGC/CCTCTG		1																																																																																																																																1
AGAGGG/CCCTCT	5	1																																																																																																																																6
AGATCC/ATCTGG	1	1																																																																																																																																2
AGATGC/ATCTGC	1																																																																																																																																	1
AGCAGG/CCTGCT	2		1																																																																																																																															3
AGCATC/ATGCTG	2																																																																																																																																	2
AGCCAT/ATGGCT	2																																																																																																																																	2
AGCCCC/CTGGGG	1	1																																																																																																																																2
AGCCCG/CGGGCT	2	1																																																																																																																																3
AGCCGC/CGGCTG	6	1																																																																																																																																7
AGCCGG/CCGGCT	4																																																																																																																																	4
AGCCTC/AGGCTG	1																																																																																																																																	1
AGCCTG/AGGCTC	3	2	1																																																																																																																															6
AGCGAT/ATCGCT	1	1																																																																																																																																2
AGCGCG/CGCGCT	1																																																																																																																																	1
AGCGGC/CCGCTG	1	2																																																																																																																																3
AGCGGG/CCCGCT	2																																																																																																																																	2
AGCTCC/AGCTGG	3	1																																																																																																																																4
AGCTGC/AGCTGC	1																																																																																																																																	1
AGGATC/ATCCTG	1																																																																																																																																	1
AGGATG/ATCCTC	8	3																																																																																																																																11
AGGCGC/CCTGCG	2																																																																																																																																	2
AGGCGG/CCGCCT	3																																																																																																																																	3
AGGGAT/ATCCCT	1																																																																																																																																	1
AGGGGC/CCCCTG	1																																																																																																																																	1
AGGGGG/CCCCCT	3																																																																																																																																	3
ATATCC/ATATGG	1																																																																																																																																	1
ATATCG/ATATCG	1																																																																																																																																	1
ATATGC/ATATGC	1																																																																																																																																	1
ATCCCC/ATGGGG	1																																																																																																																																	1
ATCCCG/ATCGGG	2																																																																																																																																	2
ATCGCC/ATGGCG	2																																																																																																																																	2
ATCGGC/ATGCCG	2																																																																																																																																	2
CCCCGG/CCGGGG	1																																																																																																																																	1
CCCGCG/CGCGGG	1																																																																																																																																	1
CCGGCG/CCGGCG	1																																																																																																																																	1
