Specifications
==============

Sequence source file: "/home/zmahmoud/github-projects/africandsi-megassr/laptop_run_20261012/work/megassr-local-4/megassr/results/hub_GCA_010233705.1/fasta/hub_GCA_010233705.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              15
Total size of examined sequences (bp):           19189406
Total number of identified SSRs:                 1481
Number of SSR containing sequences:              15
Number of sequences containing more than 1 SSR:  15
Number of SSRs present in compound formation:    103


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	36
2	265
3	385
4	113
5	172
6	510

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	2	3	7	3			2				1						1													21
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1																														1
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3	1	2	2	1	1	1		1			2																			14
AC	-	-	-	1	3	3		2																																								9
AG	-	-	-	14	2	1																																										17
AT	-	-	-	30	27	19	9	8	3	3					1																																	100
CA	-	-	-	3	1	1			1							1																																7
CT	-	-	-	17		4	1	1	1																																							24
GA	-	-	-	8	5	1	1																																									15
GT	-	-	-	3		1						1																																				5
TA	-	-	-	25	11	6	10	2		1	1	1		1		1					1																											60
TC	-	-	-	16	3	2																																							1			22
TG	-	-	-	2	1	1	1	1																																								6
AAC	-	-	3																																													3
AAG	-	-	13	4																																												17
AAT	-	-	1	1																																												2
ACA	-	-	2	3	1					1																																						7
ACC	-	-	4	2	1	1																																										8
ACT	-	-	1	1																																												2
AGA	-	-	14	3		1	1																																									19
AGC	-	-	7	3	2																																											12
AGG	-	-	4	2																																												6
AGT	-	-	1																																													1
ATA	-	-	3	2																																												5
ATC	-	-	5		1																																											6
ATG	-	-	4		1	1																																										6
ATT	-	-	1							1																																						2
CAA	-	-	6					1																																								7
CAC	-	-	2	1																																												3
CAG	-	-	6	6	3	1																																										16
CAT	-	-	7		1		1																																									9
CCA	-	-	6	6	1																																											13
CCG	-	-	3	1																																												4
CCT	-	-	7		1																																											8
CGA	-	-	1		1																																											2
CGC	-	-	2																																													2
CGG	-	-	2	1																																												3
CGT	-	-	1		1																																											2
CTC	-	-	3	1																																												4
CTG	-	-	6	5		1																																										12
CTT	-	-	9	2	1	2																																										14
GAA	-	-	12	3																																												15
GAC	-	-	3							1																																						4
GAG	-	-	5	2																																												7
GAT	-	-	4	2	1	1																																										8
GCA	-	-	2	2																																												4
GCC	-	-	3		1																																											4
GCG	-	-	2	1																																												3
GCT	-	-	4	5	2	1																																										12
GGA	-	-	5	1																																												6
GGC	-	-	4	2	1																																											7
GGT	-	-	7	2			1																																									10
GTA	-	-																															1															1
GTC	-	-	2																																													2
GTG	-	-	3		1	1																																										5
GTT	-	-	2	2																																												4
TAA	-	-	2	1																	1																											4
TAC	-	-	1																																													1
TCA	-	-	5																																													5
TCC	-	-	8	1	2			1																																								12
TCG	-	-	4	3																																												7
TCT	-	-	11	3	1			1	1																																							17
TGA	-	-	5		1																																											6
TGC	-	-	4	2		1																																										7
TGG	-	-	4	2	1																																											7
TGT	-	-	7	3		1																																										11
TTA	-	-	2	2																																												4
TTC	-	-	6	1	1	1																																										9
TTG	-	-	3	1	1	2							1																																			8
AAAC	-	1																																														1
AAAG	-	1																																														1
AAAT	-	1																																														1
AACC	-	1																																														1
AATA	-	2	1																																													3
ACGC	-	1																																														1
ACGT	-	1																																														1
ACTG	-		1																																													1
AGGA	-	5	2	1																																												8
AGGG	-	1																																														1
AGGT	-																				1																											1
ATAA	-	3		1																																												4
ATAC	-	1																																														1
ATCC	-	1					1																																									2
ATGA	-	1	1																																													2
ATGC	-	1																																														1
ATGG	-	1	3																																													4
ATTT	-	2																																														2
CAAA	-		1																																													1
CAAC	-	1																																														1
CACT	-	1																																														1
CATC	-	1	3																																													4
CCAT	-	3	1																																													4
CCGT	-	1																																														1
CGGA	-	1																																														1
CGTC	-	2																																														2
CTAA	-					1																																										1
CTGC	-			1																																												1
CTTC	-	1																																														1
CTTT	-			1																																												1
GAAA	-	2	1		1																																											4
GAAG	-	2	2		1																																											5
GAAT	-		1																																													1
GACG	-	1																																														1
GATG	-	1	1	1						1																																						4
GCAT	-	1																																														1
GCCG	-	1																																														1
GCTT	-	1																																														1
GGAC	-	1																																														1
GGAG	-	1																																														1
GGAT	-	1																																														1
GTCG	-	1																																														1
GTTA	-	1																																														1
TAAA	-	1																																														1
TACC	-				1																																											1
TATT	-		1																																													1
TCAA	-	1																																														1
TCCA	-	2	1																																													3
TCCG	-		1																																													1
TCCT	-	2																																														2
TCTA	-	1																																														1
TGAC	-	1																																														1
TGGA	-	3	1	2	1	1	1																																									9
TTAA	-	1																																														1
TTAT	-	2																							1																							3
TTCC	-	2	1																																													3
TTCT	-	1																																														1
TTTA	-	2	1		1																																										1	5
TTTC	-	1																																														1
AAAAC	1																																															1
AAAAG	3																																															3
AAAAT	4																																															4
AAAGA	1																																															1
AACCA	1																																															1
AAGAA	1																																															1
AAGAG	1																																															1
AAGGG	2																																															2
AATAA	2																																															2
AATCC	2																																									1						3
AATCG	1			1																																												2
AATGA	1																																															1
AATGG	1																																															1
AATGT	1																																															1
AATTA	1																																															1
ACATT	1																																															1
ACCCT	1																																															1
ACGCG	2																																															2
AGAAC	1																																															1
AGAAG	1																																															1
AGAGA	1																																															1
AGATG	1																																															1
AGATT	3																																															3
AGCCA	1																																															1
AGGAA	1																																															1
AGGGG	1	1																																														2
AGGTT		1																																														1
ATAAA	1																																															1
ATAGG	1																																															1
ATATA		1																																														1
ATATT	1																																															1
ATCTC	1																																															1
ATGGA	2																																															2
ATGTA	2																																															2
ATTAT	1																																															1
ATTCC	1																																															1
ATTGA	1																																															1
ATTGC	1																																															1
ATTTT	3																																															3
CACAA	1																																															1
CACCA	1																																															1
CAGTA	1																																															1
CATCT			1																																													1
CATGT	1																																															1
CATTA	3																																															3
CCACT	1																																															1
CCATC	1																																															1
CCCAA	1																																															1
CCCCA	1																																															1
CCCGC	1																																															1
CCGCA	1																																															1
CCTAC	1																																															1
CGACT	1																																															1
CGATG	1																																															1
CGATT	1																																															1
CGCCC		1																																														1
CGCGT	2																																															2
CGTTC	1																																															1
CTAAC	1																																															1
CTAAG	1																																															1
CTAAT	3																																															3
CTATG	1																																															1
CTCTT	2																																															2
CTGCC	1																																															1
CTGGA	1																																															1
CTTCC	1																																															1
CTTCT	2																																															2
CTTTC				1																																												1
GAAAA	1	1																																														2
GAAAG	1																																															1
GACAA	1																																															1
GACGC	3																																															3
GAGAA	1																																															1
GAGAT	2	1																																														3
GAGGA	1																																															1
GATGA	1																																															1
GATTT	1																																															1
GCATA	1																																															1
GCATC	1																																															1
GCCAC	1																																															1
GCTTT	1																																															1
GGAAA	2																																															2
GGAGA	1																																															1
GGATC	1																																															1
GGCGG	1																																															1
GGGAA	1																																															1
GGGGA	4																																															4
GGGTG		1																																														1
GGGTT	1																																															1
GGTAC	1																																															1
GGTAT	1																																															1
GTACT	1																																															1
GTATC	2																																															2
GTCAT	1																																															1
GTTTC	1																																															1
GTTTT	1																																															1
TAAAA	1																																															1
TAAAT		1																																														1
TACAT	1																																															1
TAGGA	1																																															1
TCAGA		1																																														1
TCATT	2																																															2
TCCAT	1																																															1
TCCGA	1																																															1
TCCTT	1																																															1
TCTAA	5																																															5
TCTGC	1																																															1
TCTTC	1																																															1
TGAGA	1	1																																														2
TGATC		1																																														1
TGTCC	1																																															1
TGTCG		1																																														1
TTATA	2																																															2
TTCCA	1																																															1
TTCGT	1																																															1
TTGTA	1																																															1
TTGTT	1																																															1
TTTCG	2																																															2
TTTCT	1																																															1
TTTGT	2																																															2
TTTTA	2																																															2
TTTTC	3	1																																														4
TTTTG	2																																															2
AAAAAC	1	1																																														2
AAAAAG	1																																															1
AAAAGA			1																																													1
AAAATA	1																																															1
AAACCC	1																																															1
AAAGAA	1																																															1
AAAGGA	1																																															1
AAAGGT	1																																															1
AAATAA	55	2	1																																													58
AAATAT	1																																															1
AACAAA	1																																															1
AACAGC	1																																															1
AACAGT	1																																															1
AAGAGG	1																																															1
AAGGAA		1																																														1
AAGGAG	1																																															1
AAGGGA	1																																															1
AAGGGC	1																																															1
ACAATA	1																																															1
ACAATG	1																																															1
ACAATT		1																																														1
ACACCC	1																																															1
ACATGA	1																																															1
ACCCAG	1																																															1
ACCTGC	1																																															1
ACGACT		1																																														1
ACTCAA		1																																														1
AGAAGC		1																																														1
AGAAGG	1	1																																														2
AGAGAA				1																																												1
AGAGAC	1																																															1
AGAGTT	1																																															1
AGCAGA		1																																														1
AGCAGG	1																																															1
AGCCAA	1																																															1
AGCTTC	1																																															1
AGTATT	1																																															1
ATACGC	1																																															1
ATATAC	1																																															1
ATCAAA	1																																															1
ATCATT	1																																															1
ATCCCA	1																																															1
ATCCTC																									1																							1
ATCGGC	1																																															1
ATCGTT	1																																															1
ATCTTC	1																																															1
ATGGAT	1																																															1
ATGGCA	1																																															1
ATGTAG	1																																															1
ATTCCC	1																																															1
ATTTGC			1																																													1
CAAAAA	12																																															12
CAAACA	1																																															1
CAACAG	1																																															1
CAAGCA	1																																															1
CAAGCT	2																																															2
CAAGGC	1																																															1
CAATCG	1																																															1
CAATCT	1																																															1
CACCAT	1																																															1
CACCTC	3	1																																														4
CACTAT	1																																															1
CAGAAC	1																																															1
CAGAAG			1																																													1
CAGCAA	1	1						1																																								3
CAGCCT	1																																															1
CAGCTC	1																																															1
CAGGCG	1																																															1
CAGTCT	1																																															1
CATATA	2																																															2
CATCGG	1																																															1
CATGGG	1																																															1
CATGGT				1																																												1
CATTAT						1																																										1
CCAAAC	1																																															1
CCAAAT		1																																														1
CCAACA	1																																															1
CCACAG	1																																															1
CCACAT	1																																															1
CCATCA	1																																															1
CCATCC	2	1																																														3
CCATGC	1																																															1
CCATTT	1																																															1
CCCAAA	1																																															1
CCCAGA		2		1																																												3
CCCAGT		1																																														1
CCCATA	1																																															1
CCCCAA	1	1																																														2
CCCCAC		2																																														2
CCCCAT					1																																											1
CCCCGC	1																																															1
CCCCTC	1	1																																														2
CCCCTG	1																																															1
CCCTAA	1																																															1
CCCTGC	1																																															1
CCGCAC	1																																															1
CCGCCA	1																																															1
CCGGCA	1																																															1
CCGTGC	1																																															1
CCGTTA	1																																															1
CCTCAC	1																																															1
CCTCAT	1	1																																														2
CCTCCA	2	1																																														3
CCTCTC	2																																															2
CCTGCC	1																																															1
CCTGCG	1																																															1
CCTGCT	1																																															1
CCTGTT	1																																															1
CCTTGT	1																																															1
CCTTTT	1																																															1
CGACAC		1																																														1
CGAGGA	1																																															1
CGAGTC	1																																															1
CGATGC		1																																														1
CGCCGT	1																																															1
CGCCTG	1																																															1
CGGTCC	2																																															2
CTAAGT		1																																														1
CTACCA	1																																															1
CTACTC	1																																															1
CTATGG	1																																															1
CTCATC	2								1																																							3
CTCCCC	1	2																																														3
CTCCCG	2																																															2
CTCGCC	1																																															1
CTCTCC	1																																															1
CTCTGG	1																																															1
CTCTTC	1																																															1
CTGATC		1																																														1
CTGCCG	1																																															1
CTGGAG	1																																															1
CTGGTG	1																																															1
CTGTCC	1																																															1
CTGTTG	1																																															1
CTTATC	1																																															1
CTTCCC	2																																															2
CTTCGT	1																																															1
CTTCTG		1																																														1
CTTGGT	1																																															1
CTTTGC	1																																															1
CTTTTC	1																																															1
CTTTTT	1																																															1
GAAAAA	1																																															1
GAAAGT	1																																															1
GAACCA		1																																														1
GAACCT			1																																													1
GAACGA	1																																															1
GAAGAG	1																																															1
GAATCC	1																																															1
GACCCG	1																																															1
GACGAG	1																																															1
GACGAT	1																																															1
GACTCC	1																																															1
GACTCG	1																																															1
GAGAAC	1																																															1
GAGATG		1																																														1
GAGCAG	1						1																																									2
GAGGAA	3																																															3
GAGGAC	1																																															1
GAGGAT	1																																															1
GAGGGA	1																																															1
GAGGGT		1																																														1
GATAAA	1																																															1
GATCTC		1																																														1
GATGAA	1																																															1
GATGAG	1																																															1
GATGGA	3																																															3
GATGTC		1																																														1
GATTTT	1																																															1
GCAACA	1																																															1
GCAAGG	1																																															1
GCACAA	1																																															1
GCACCA		1																																														1
GCACCT	2																																															2
GCAGAA	1																																															1
GCAGGC	1																																															1
GCCACA	1																																															1
GCCGGC	1																																															1
GCGGCA	1																																															1
GCGTCT	1																																															1
GCGTTT	1																																															1
GCTCAA	1																																															1
GCTCAG						1																																										1
GCTCTT	1																																															1
GCTGAG	1																																															1
GCTGAT	1																																															1
GCTGGT		1																																														1
GCTTGA	1																																															1
GGAAAA	1																																															1
GGAAGG	1																																															1
GGACAA	1																																															1
GGACCA		1																																														1
GGACGA	1																																															1
GGAGAA		1																																														1
GGAGAC	1																																															1
GGAGAG	1																																															1
GGAGCG	1																																															1
GGAGGG	2																																															2
GGAGGT	1																																															1
GGCCCG	1																																															1
GGCGAG		1																																														1
GGCGAT	1																																															1
GGCGCA	1																																															1
GGCGCC	1																																															1
GGCGGA	2																																															2
GGCGGG	1																																															1
GGGAAG	1																																															1
GGGACT	1																																															1
GGGAGA	1																																															1
GGGAGG	1																																															1
GGGCAA	1																																															1
GGGCAC	1																																															1
GGGCAT	1																																															1
GGGCGT	1	1																																														2
GGGGAA	2																																															2
GGGGAG	2																																															2
GGGGAT	1																																															1
GGGGCT		1																																														1
GGGGGA	7																																															7
GGGGGC	2																																															2
GGGGGT	1																																															1
GGGTGC	1																																															1
GGTACC	1																																															1
GGTACG	1																																															1
GGTGCA	1																																															1
GGTGCG			1																																													1
GGTGGA	1																																															1
GGTGGC	3																																															3
GGTGTG	1																																															1
GGTTTC	1																																															1
GTCACC	1																																															1
GTCGCC	1																																															1
GTCTCT	2																																															2
GTCTTT		1																																														1
GTGGAA	1																																															1
GTTCGG	1																																															1
GTTGCC	1																																															1
TAACAC	1																																															1
TACATT	1																																															1
TACCCA	1																																															1
TACTGC	1																																															1
TACTTG		1																																														1
TAGCAT	1																																															1
TAGGAT	1																																															1
TATATG	1																																															1
TATGTG	1																																															1
TATTTT	57	2	1																																													60
TCAACA	1																																															1
TCAGAG	1																																															1
TCAGAT	1																																															1
TCATCC	1																																															1
TCATCT		1																																														1
TCATTG			1																																													1
TCATTT	1																																															1
TCCCTC	2																																															2
TCCGCT	1																																															1
TCCTCA	1	1	1																																													3
TCCTCT	3																																															3
TCCTGC	1																																															1
TCCTTC	2																																															2
TCCTTG	1																																															1
TCCTTT	1	1																																														2
TCGCAT	1																																															1
TCTAAA	1																																															1
TCTAAC	1																																															1
TCTCAG		1																																														1
TCTCCC	2																																															2
TCTCCT	1																																															1
TCTCTG	1																																															1
TCTCTT	1																																															1
TCTGGT	1																																															1
TCTTCA	1																																															1
TCTTCC	2																																															2
TCTTGC	1																																															1
TCTTTT	1																																															1
TGACCT	1																																															1
TGAGCC	1																																															1
TGAGCG	1																																															1
TGCAAC	1																																															1
TGCAGG	1																																															1
TGCCCC	1																																															1
TGCCCT	1																																															1
TGCCTT	1																																															1
TGCGAG	1																																															1
TGCGGC	1																																															1
TGCGTT	1																																															1
TGCTCG	1																																															1
TGCTGA	1																																															1
TGGCTC	1																																															1
TGGGAT	1																																															1
TGGGTT		1																																														1
TGGTGC	2																																															2
TGGTGT	1																																															1
TGTCAT		1																																														1
TGTCCT	1																																															1
TGTGAT	1																																															1
TGTGGA	1																																															1
TGTGGC	1																																															1
TGTTGC	1																																															1
TTACAA	1																																															1
TTAGAT	1																																															1
TTATTT	1																																															1
TTCACA	1																																															1
TTCCCT	1																																															1
TTCCTT	3																																															3
TTCTCC	1																																															1
TTCTGA	1																																															1
TTCTTG		1					1																																									2
TTGCTG	1																																															1
TTGGCG	3																																															3
TTTATT	1																																															1
TTTCCC	2																																															2
TTTGCT	1																																															1
TTTGGG	1																																															1
TTTTCT	1																																															1
TTTTGC	1																																															1
TTTTTA	1																																															1
TTTTTC	2																																															2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5	3	5	9	4	1	1	2	1			3						1													35
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1																														1
AC/GT	-	-	-	9	5	6	1	3	1			1				1																																27
AG/CT	-	-	-	55	10	8	2	1	1																																				1			78
AT/AT	-	-	-	55	38	25	19	10	3	4	1	1		1	1	1					1																											160
AAC/GTT	-	-	23	9	2	3		1		1			1																																			40
AAG/CTT	-	-	65	16	3	4	1	1	1																																							91
AAT/ATT	-	-	9	6						1											1																											17
ACC/GGT	-	-	26	13	4	2	1																																									46
ACG/CGT	-	-	11	3	2					1																																						17
ACT/AGT	-	-	3	1																													1															5
AGC/CTG	-	-	29	23	7	4																																										63
AGG/CCT	-	-	32	7	3			1																																								43
ATC/ATG	-	-	30	2	5	2	1																																									40
CCG/CGG	-	-	16	5	2																																											23
AAAC/GTTT	-	1	1																																													2
AAAG/CTTT	-	5	1	1	1																																											8
AAAT/ATTT	-	13	3	1	1																				1																						1	20
AACC/GGTT	-	2																																														2
AACT/AGTT	-	1				1																																										2
AAGC/CTTG	-	1																																														1
AAGG/CCTT	-	12	5	1	1																																											19
AATC/ATTG	-	1																																														1
AATG/ATTC	-	1	2																																													3
AATT/AATT	-	1																																														1
ACAT/ATGT	-	1																																														1
ACCG/CGGT	-	1																																														1
ACCT/AGGT	-				1																1																											2
ACGC/CGTG	-	1																																														1
ACGG/CCGT	-	6	1																																													7
ACGT/ACGT	-	1																																														1
ACTC/AGTG	-	1																																														1
ACTG/AGTC	-	1	1																																													2
AGAT/ATCT	-	1																																														1
AGGC/CCTG	-			1																																												1
AGGG/CCCT	-	2																																														2
ATCC/ATGG	-	13	10	3	1	1	2			1																																						31
ATGC/ATGC	-	2																																														2
CCGG/CCGG	-	1																																														1
AAAAC/GTTTT	7																																															7
AAAAG/CTTTT	10	2																																														12
AAAAT/ATTTT	13																																															13
AAACC/GGTTT	1																																															1
AAACG/CGTTT	4																																															4
AAAGC/CTTTG	1																																															1
AAAGG/CCTTT	5			1																																												6
AAATC/ATTTG	1																																															1
AAATG/ATTTC	3																																															3
AAATT/AATTT	1	1																																														2
AACAC/GTGTT	1																																															1
AACAG/CTGTT	1																																															1
AACCC/GGGTT	2																																															2
AACCT/AGGTT	1	1																																														2
AACGG/CCGTT	1																																															1
AAGAC/CTTGT	1																																															1
AAGAG/CTCTT	9																																															9
AAGCC/CTTGG	1																																															1
AAGCT/AGCTT	1																																															1
AAGGG/CCCTT	4																																															4
AATAC/ATTGT	1																																															1
AATAT/ATATT	4	1																																														5
AATCC/ATTGG	2																																									1						3
AATCG/ATTCG	2			1																																												3
AATCT/AGATT	11																																															11
AATGC/ATTGC	1																																															1
AATGG/ATTCC	6																																															6
AATGT/ACATT	8																																															8
AATTC/AATTG	1																																															1
ACACC/GGTGT	1																																															1
ACACG/CGTGT		1																																														1
ACAGG/CCTGT	1																																															1
ACAGT/ACTGT	2																																															2
ACATG/ATGTC	2																																															2
ACCAT/ATGGT	1																																															1
ACCCC/GGGGT	1	1																																														2
ACCCT/AGGGT	2																																															2
ACCGC/CGGTG	1																																															1
ACCGT/ACGGT	1																																															1
ACGAT/ATCGT	2																																															2
ACGCC/CGTGG	1																																															1
ACGCG/CGCGT	7																																															7
ACTCC/AGTGG	1																																															1
ACTCG/AGTCG	1																																															1
ACTGG/AGTCC	1																																															1
AGAGC/CTCTG	1																																															1
AGAGG/CCTCT	2																																															2
AGATC/ATCTG		2																																														2
AGATG/ATCTC	6	2	1																																													9
AGCAT/ATGCT	2																																															2
AGGAT/ATCCT	2																																															2
AGGGC/CCCTG	1																																															1
AGGGG/CCCCT	5	1																																														6
ATCCC/ATGGG	1																																															1
ATCCG/ATCGG	2																																															2
ATCGC/ATGCG	2																																															2
CCCCG/CGGGG	2	1																																														3
AAAAAC/GTTTTT	14	1																																														15
AAAAAG/CTTTTT	8		1																																													9
AAAAAT/ATTTTT	116	4	2																																													122
AAAAGC/CTTTTG	2																																															2
AAAAGG/CCTTTT	8	2																																														10
AAAATC/ATTTTG	2																																															2
AAAATG/ATTTTC	1																																															1
AAACAC/GTGTTT	1																																															1
AAACCC/GGGTTT	4	1																																														5
AAACCG/CGGTTT	1																																															1
AAACGC/CGTTTG	2																																															2
AAACTC/AGTTTG		1																																														1
AAAGAC/CTTTGT		1																																														1
AAAGAG/CTCTTT	1			1																																												2
AAAGAT/ATCTTT	1																																															1
AAAGCC/CTTTGG	1																																															1
AAAGGC/CCTTTG	2																																															2
AAAGGG/CCCTTT	4																																															4
AAAGGT/ACCTTT	1																																															1
AAAGTG/ACTTTC	1																																															1
AAATAT/ATATTT	1																																															1
AAATCC/ATTTGG		1																																														1
AAATCT/AGATTT	2																																															2
AAATGC/ATTTGC			1																																													1
AAATGG/ATTTCC	1																																															1
AAATGT/ACATTT	1																																															1
AACAAG/CTTGTT		1					1																																									2
AACAAT/ATTGTT	1																																															1
AACACC/GGTGTT	2																																															2
AACACT/AGTGTT	1																																															1
AACAGC/CTGTTG	7	1						1																																								9
AACAGG/CCTGTT	1																																															1
AACAGT/ACTGTT	1																																															1
AACATC/ATGTTG	1																																															1
AACATG/ATGTTC	1																																															1
AACCAG/CTGGTT	2	1																																														3
AACCCC/GGGGTT	1	1																																														2
AACCCG/CGGGTT	1																																															1
AACCCT/AGGGTT	1																																															1
AACCTG/AGGTTC			1																																													1
AACGAG/CGTTCT	2																																															2
AACGAT/ATCGTT	1																																															1
AACGCC/CGTTGG	3																																															3
AACGGC/CCGTTG	1																																															1
AACGGT/ACCGTT	1																																															1
AACTCT/AGAGTT	2																																															2
AACTGC/AGTTGC	1																																															1
AAGACC/CTTGGT	1																																															1
AAGACG/CGTCTT	1																																															1
AAGAGC/CTCTTG	2																																															2
AAGAGG/CCTCTT	11																																															11
AAGATG/ATCTTC	3	1																																														4
AAGCAC/CTTGTG	2																																															2
AAGCAG/CTGCTT	1	3	1																																													5
AAGCGG/CCGCTT	1																																															1
AAGCTC/AGCTTG	4																																															4
AAGCTG/AGCTTC	1																																															1
AAGGAC/CCTTGT	4																																															4
AAGGAG/CCTTCT	6	2																																														8
AAGGAT/ATCCTT	1																																															1
AAGGCC/CCTTGG	1																																															1
AAGGGC/CCCTTG	4																																															4
AAGGGG/CCCCTT	6																																															6
AAGGTC/ACCTTG	1																																															1
AAGTAC/ACTTGT		1																																														1
AAGTCT/ACTTAG		1																																														1
AAGTGG/ACTTCC	1																																															1
AATACT/AGTATT	1																																															1
AATCAC/ATTGTG	1																																															1
AATCAG/ATTCTG	1																																															1
AATCCC/ATTGGG	2																																															2
AATCCG/ATTCGG	1																																															1
AATCCT/AGGATT	1																																															1
AATCGC/ATTGCG	1																																															1
AATCTC/AGATTG	1																																															1
AATCTG/AGATTC	1																																															1
AATGAC/ATTGTC	1	1	1																																													3
AATGAT/ATCATT	1					1																																										2
AATGCG/ATTCGC	1																																															1
AATGCT/AGCATT	1																																															1
AATGGC/ATTGCC	1																																															1
AATGGG/ATTCCC	1																																															1
AATGTG/ACATTC	1																																															1
AATTAC/AATTGT	1	1																																														2
ACACAT/ATGTGT	1																																															1
ACACCC/GGGTGT	2																																															2
ACACCG/CGGTGT		1																																														1
ACAGAG/CTCTGT	4																																															4
ACAGCC/CTGTGG	3																																															3
ACAGGG/CCCTGT	1																																															1
ACATAT/ATATGT	4																																															4
ACATCC/ATGTGG	2																																															2
ACATCG/ATGTCG		1																																														1
ACATCT/AGATGT	1																																															1
ACCACT/AGTGGT	1																																															1
ACCAGC/CTGGTG	3	2																																														5
ACCAGG/CCTGGT		1																																														1
ACCATC/ATGGTG	2																																															2
ACCATG/ATGGTC				1																																												1
ACCCAG/CTGGGT	1	2		1																																												4
ACCCAT/ATGGGT	2																																															2
ACCCCC/GGGGGT	1	2																																														3
ACCCGC/CGGGTG	2		1																																													3
ACCCGG/CCGGGT	1																																															1
ACCCGT/ACGGGT	1																																															1
ACCCTC/AGGGTG	1	1																																														2
ACCGCC/CGGTGG	4																																															4
ACCGGC/CCGGTG	1																																															1
ACCGGG/CCCGGT	2																																															2
ACCGGT/ACCGGT	1																																															1
ACCGTC/ACGGTG	1																																															1
ACCTCC/AGGTGG	7	2																																														9
ACCTGC/AGGTGC	5																																															5
ACGACT/AGTCGT		1																																														1
ACGAGC/CGTGCT	1																																															1
ACGAGG/CCTCGT	4																																															4
ACGATG/ATCGTC	1																																															1
ACGCAG/CGTCTG	1																																															1
ACGCAT/ATGCGT	1																																															1
ACGCCC/CGTGGG	1	1																																														2
ACGCTC/AGCGTG	1																																															1
ACGGAG/CCGTCT	1																																															1
ACGGCG/CCGTCG	2																																															2
ACGGGC/CCCGTG	2																																															2
ACTATC/AGTGAT	1																																															1
ACTCCG/AGTCGG	1																																															1
ACTCCT/AGGAGT	1																																															1
ACTCGC/AGTGCG	1																																															1
ACTCGG/AGTCCG	2																																															2
ACTCTG/AGAGTC	1																																															1
ACTGAG/AGTCTC	1	1																																														2
ACTGCT/AGCAGT	1																																															1
ACTGGG/AGTCCC	1	1																																														2
AGAGCC/CTCTGG	2																																															2
AGAGGG/CCCTCT	10																																															10
AGATCG/ATCTCG		1																																														1
AGATGG/ATCTCC	3	1																																														4
AGCAGG/CCTGCT	4						1																																									5
AGCATC/ATGCTG	2																																															2
AGCCAT/ATGGCT	1																																															1
AGCCCC/CTGGGG		1																																														1
AGCCGC/CGGCTG	1																																															1
AGCCTC/AGGCTG	2																																															2
AGCCTG/AGGCTC	1					1																																										2
AGCGGC/CCGCTG	2																																															2
AGCGGG/CCCGCT	3																																															3
AGCTCC/AGCTGG	2																																															2
AGGATC/ATCCTG		1																																														1
AGGATG/ATCCTC	7	2	1						1																1																							12
AGGCGC/CCTGCG	5																																															5
AGGCGG/CCGCCT	2																																															2
AGGGCG/CCCTCG	1	1																																														2
AGGGGC/CCCCTG	4																																															4
AGGGGG/CCCCCT	14	3																																														17
ATATCC/ATATGG	1																																															1
ATCCCC/ATGGGG	3	1			1																																											5
ATCGCC/ATGGCG	1																																															1
ATCGGC/ATGCCG	2	1																																														3
ATGCCC/ATGGGC	3																																															3
CCCCCG/CGGGGG	4																																															4
CCCGGG/CCCGGG	1																																															1
CCGGCG/CCGGCG	2																																															2
