Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_003667245.1/fasta/hub_GCA_003667245.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              596
Total size of examined sequences (bp):           30325641
Total number of identified SSRs:                 12833
Number of SSR containing sequences:              445
Number of sequences containing more than 1 SSR:  421
Number of SSRs present in compound formation:    2105


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	170
2	1573
3	5844
4	1994
5	2021
6	1231

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	16	11	13	4	10	7	6	5	4	1	1	2	4		2														1	87
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	15	11	9	6	9	5	5	4	1	2	5	3		4	1	2	1													83
AC	-	-	-	41	20	4	2	2	1	1	1				1																																73
AG	-	-	-	16	4	5	1	2																																							28
AT	-	-	-	355	150	93	47	29	20	7	7	1	1						1																												711
CA	-	-	-	21	14	2	1	4	2		1																																				45
CT	-	-	-	7	3	2	2								1																																15
GA	-	-	-	7	1		1																																								9
GT	-	-	-	25	10	7	3		1																																						46
TA	-	-	-	269	125	75	31	23	15	7	4		1	2										1																							553
TC	-	-	-	13		5		1		1																																					20
TG	-	-	-	37	10	11	7	2	3	1		1		1																																	73
AAC	-	-	136	75	31	12	4	1								1	1																					1									262
AAG	-	-	19	4	2																																										25
AAT	-	-	371	163	82	44	21	11	5	3	4	3	3	7	3	2		2										1																			725
ACA	-	-	106	32	13	7		4			2																																				164
ACC	-	-	12	5	1																																										18
ACG	-	-	1	2																																											3
ACT	-	-	44	7		3										1																															55
AGA	-	-	4	4		1																																									9
AGC	-	-	7	3	2																																										12
AGT	-	-	30	7	6	1	1		1																																						46
ATA	-	-	201	102	70	32	9	9	3	2	4	1				2			1	1			1																								438
ATC	-	-	54	21	3	3	1			2																																					84
ATG	-	-	19	11	4	3				1																																					38
ATT	-	-	251	125	55	29	18	8	4	2	1	2	1	2	2			1			1		1																								503
CAA	-	-	176	89	37	22	6	1	2		1							1																													335
CAC	-	-	7	1	3																																										11
CAG	-	-	16	6	1										1																																24
CAT	-	-	38	22	10	4																																									74
CCA	-	-	6	1		1																																									8
CCT	-	-	2	1																																											3
CGG	-	-	1																																												1
CTA	-	-	20	10	3		1		1		1														1		1																				38
CTC	-	-	5																																												5
CTG	-	-	9	2								1																																			12
CTT	-	-	17	5	1																																										23
GAA	-	-	18	5	3	1																																									27
GAC	-	-	4	1																																											5
GAT	-	-	38	8	4	1										2																															53
GCA	-	-	4	1			1																																								6
GCC	-	-	2	1																																											3
GCT	-	-	3	1		1																																									5
GGA	-	-		1																																											1
GGC	-	-	1																																												1
GGT	-	-	5	2	1																																										8
GTA	-	-	20	6		1			1																																						28
GTC	-	-	1	2																																											3
GTG	-	-	9	2			1																																								12
GTT	-	-	93	24	17	5		1	2				1		1																																144
TAA	-	-	248	128	53	32	9	5	3	2	5		2	1		1	1		1		1			1																							493
TAC	-	-	25	19	3	1	1	2																																							51
TAG	-	-	38	10	4	5	2											2																													61
TAT	-	-	332	152	87	41	22	8	6	1	2	4	2	1	2		3	2	2			1																									668
TCA	-	-	27	16	3	2	1	1			1																																				51
TCC	-	-	1	1																																											2
TCG	-	-	6	3																																											9
TCT	-	-	27	11	3	2	2																																								45
TGA	-	-	49	19	6	4	1	2																																							81
TGC	-	-	21	6	3				2																																						32
TGG	-	-	10	1																																											11
TGT	-	-	136	77	31	12	4	4	1	3	1				1				1																												271
TTA	-	-	250	110	51	21	19	7	6	3	2	2	3	4			1		1																												480
TTC	-	-	17	5	3		1																																								26
TTG	-	-	196	84	26	19	12	2	2	4	2		4																																		351
AAAC	-	10	2		1																																										13
AAAG	-	11	4	1				1																																							17
AAAT	-	43	14	1	1							1																																			60
AACA	-	19	2	2																																											23
AACC	-	5	3																																												8
AACT	-	5																																													5
AAGA	-	7	1	2																																											10
AAGC	-	1																																													1
AAGT	-	1		1																																											2
AATA	-	61	16	4	1		1	1		1																																					85
AATC	-	54	21	7	5					1							1																														89
AATG	-	14	5	1																																											20
AATT	-	18	3	2																																											23
ACAA	-	5		2																																											7
ACAG	-	1	1																																												2
ACAT	-	5																																													5
ACCA	-	3	1	1																																											5
ACCG	-	1																																													1
ACCT	-	1																																													1
ACTA	-	2	2																																												4
ACTC	-	3	1																																												4
ACTG	-	5																																													5
AGAA	-	3	1																																												4
AGAC	-	3																																													3
AGAT	-	26	7	3	1											1	1																														39
AGTC	-	3																																													3
AGTG	-	3																																													3
AGTT	-	1		1																																											2
ATAA	-	27	11	3																																											41
ATAC	-	7	2																																												9
ATAG	-	45	11	2	1				1																																						60
ATCA	-	45	18	4	1	1				1																																					70
ATCC	-	6		1																																											7
ATCT	-	22	5	4	1								1																																		33
ATGA	-	11	5	1																																											17
ATGG	-	1																																													1
ATGT	-	4																																													4
ATTA	-	20	1																																												21
ATTC	-	17	5	2	1																																										25
ATTG	-	54	21	5	1	1	1																																								83
ATTT	-	13	4	2	3																																										22
CAAA	-	11	1	1	1																																										14
CAAC	-	6	2																																												8
CAAG	-		1																																												1
CAAT	-	46	19	7	1																																										73
CACC	-	1																																													1
CACT	-	1																																													1
CAGT	-	2																																													2
CATA	-	3	1																																												4
CATC	-	3	1	1																																											5
CATT	-	14	10		1																																										25
CCAA	-	3																																													3
CCAC	-	1																																													1
CCAT	-	6		1			1																																								8
CCTA	-	1																																													1
CTAA	-	3	1																																												4
CTAC	-		1																																												1
CTAT	-	21	8	3																																											32
CTCA	-		1																																												1
CTGA	-	3	1																																												4
CTGT	-	1																																													1
CTTG	-	1																																													1
CTTT	-	4																																													4
GAAA	-	2	1																																												3
GAAT	-	9	4	2																																											15
GACA	-		1																																												1
GACT	-	2																																													2
GAGT	-	2	1																																												3
GATA	-	14	4																																												18
GATC	-	2																																													2
GATG	-	1	2																																												3
GATT	-	25	9	2	3																																										39
GCAT	-	1																																													1
GCTA	-	1																																													1
GCTT	-		1																																												1
GGAT	-	1																																													1
GGCA	-	1																																													1
GGCT	-	1																																													1
GGTA	-	1		1																																											2
GGTT	-	1							1																																						2
GTAT	-	2	2																																												4
GTCA	-			1																																											1
GTGA	-	4	1																																												5
GTTA	-	4																																													4
GTTG	-	10			1																																										11
GTTT	-	7	3																																												10
TAAA	-	23	8	5																																											36
TAAC	-	2	1																																												3
TAAG	-	2																																													2
TAAT	-	15	2																																												17
TACA	-	1		2																																											3
TACC	-	1	1																																												2
TACT	-	1																																													1
TAGA	-	21	6	2	2																																										31
TAGT	-	7	1																																												8
TATC	-	42	18	2																	1																										63
TATG	-	6	2	1																																											9
TATT	-	52	23	8	4	1	1			1																																					90
TCAA	-	28	7	6	2																																										43
TCAC	-	3	1																																												4
TCAG	-	3																																													3
TCAT	-	24	4	2							1																																				31
TCTA	-	22	12	7																																											41
TCTG	-	2																																													2
TCTT	-	6	3		1																																										10
TGAA	-	7	3	2	1	1																																									14
TGAC	-	3																																													3
TGAG	-	1		1																																											2
TGAT	-	47	19	9	3	1		3			1																																				83
TGCT	-		1																																												1
TGGA	-	2		1																																											3
TGGT	-	5		1																																											6
TGTA	-	4	1	1																																											6
TGTC	-	1	1																																												2
TGTT	-	7	1																																												8
TTAA	-	15	2			1																																									18
TTAC	-	1																																													1
TTAG	-	5	3																																												8
TTAT	-	49	17	7	1	1	1																																								76
TTCA	-	11	2																																												13
TTCC	-	1																																													1
TTCG	-	1																																													1
TTCT	-	7	1																																												8
TTGA	-	51	18	6			2																																								77
TTGC	-	3																																													3
TTGG	-	10	3	2																																											15
TTGT	-	11	1	1																																											13
TTTA	-	35	10			1			1																																						47
TTTC	-	5	2	1																																											8
TTTG	-	10	4	1																																											15
AAAAC	16																																														16
AAAAG	8		1																																												9
AAAAT	23	3																																													26
AAACA	10																																														10
AAACC	8	2	1																																												11
AAACT	2																																														2
AAAGA	4	2																																													6
AAAGC	4	1																																													5
AAAGG		1	1																																												2
AAAGT		3	1																																												4
AAATA	11	1																																													12
AAATC	13		3																																												16
AAATG	9	2																																													11
AAATT	21	3																																													24
AACAA	6	1	1																																												8
AACAC	4	1																																													5
AACAG		1																																													1
AACAT	4																																														4
AACCA	3	1	1																																												5
AACCT	1																																														1
AACTA	8	2	1																																												11
AAGAA	2																																														2
AAGAG	3																																														3
AAGAT	2																																														2
AAGCA	1																																														1
AAGGA	1	1																																													2
AAGTG	1																																														1
AATAA	7																																														7
AATAC	5	2	1																																												8
AATAG	11	3	1																																												15
AATAT	26	6				1																																									33
AATCA	21	14	3																																												38
AATCC	3																																														3
AATCG	1	1																																													2
AATCT	1	2																																													3
AATGA	4	1																																													5
AATGC	1																																														1
AATGG	3																																														3
AATGT	2																																														2
AATTA	16																																														16
AATTC	4	1	1																																												6
AATTG	5			1																																											6
AATTT	28	2																																													30
ACAAA	3																																														3
ACAAC	7																																														7
ACAAT	4		1																																												5
ACACA	2																																														2
ACACC	1																																														1
ACACG	1																																														1
ACACT	4																																														4
ACATA	1																																														1
ACATC	1																																														1
ACATT	3																																														3
ACCAA	3																																														3
ACCAC	1																																														1
ACCGG	1																																														1
ACTAA	5																																														5
ACTAC	1																																														1
ACTAG	1																																														1
ACTAT	3																																														3
ACTCC	1																																														1
ACTCG	1																																														1
ACTCT	1		1																																												2
ACTGG	1																																														1
ACTTC	1																																														1
ACTTT	2																																														2
AGAAA	3		1																																												4
AGAAC		1																																													1
AGAAG	3	1									1																																				5
AGAAT	3	1																																													4
AGACA		1																																													1
AGAGA	2	1																																													3
AGAGT	2																																														2
AGATA		1																																													1
AGATC	2																																														2
AGATT	4	2																																													6
AGCAA	1																																														1
AGGAT	1																																														1
AGGTG	1																																														1
AGTAC	1																																														1
AGTAG	2																																														2
AGTAT	4																																														4
AGTGA	1																																														1
AGTGG	3																																														3
AGTGT	2																																														2
AGTTC	1																																														1
AGTTG	1																																														1
AGTTT	9	1																																													10
ATAAA	11	1																																													12
ATAAC	1																																														1
ATAAT	26	1	1				1	1																																							30
ATACA	5																																														5
ATACC	1																																														1
ATACT	5																																														5
ATAGA	9	1																																													10
ATAGG	1																																														1
ATAGT	3																																														3
ATATA	29	6					1	1																																							37
ATATC	8																																														8
ATATG	4	1																																													5
ATATT	34	4	4																																												42
ATCAA	10	3																																													13
ATCAC	3																																														3
ATCAT	3	2																																													5
ATCCA	5	3																																													8
ATCCT	1																																														1
ATCGA	1																																														1
ATCGC	1																																														1
ATCTA	8	1	1																																												10
ATCTC	1																																														1
ATCTT	4	1																																													5
ATGAA	2																																														2
ATGAC	1																																														1
ATGAG	3																																														3
ATGAT	6	1																																													7
ATGCA	1																																														1
ATGGA	2																																														2
ATGGG	1																																														1
ATGTG	1																																														1
ATGTT	3																																														3
ATTAA	5																																														5
ATTAC	4																																														4
ATTAG	3	2	1																																												6
ATTAT	13	7	2																																												22
ATTCA	13	1																																													14
ATTCC	3																																														3
ATTCG	1																																														1
ATTCT	11	3																																													14
ATTGA	3	1																																													4
ATTGG	2	1																																													3
ATTGT	9																																														9
ATTTA	14	3																																													17
ATTTC	3	1																																													4
ATTTG	14	2	1																																												17
ATTTT	20	2																																													22
CAAAA	8	2																																													10
CAAAC	15	4	2																																												21
CAAAG	1	1																																													2
CAAAT	7	2	3																																												12
CAACA	3	1																																													4
CAACT	1																																														1
CAAGA	1																																														1
CAAGC	1																																														1
CAATA	7																																														7
CAATC	6	2																																													8
CAATG	1																																														1
CAATT	4	3																																													7
CACAA	1																																														1
CACAC	4																																														4
CACAT	1																																														1
CACCC	1																																														1
CACCT	1																																														1
CACTA	1																																														1
CACTC	1																																														1
CACTT	1																																														1
CAGAA	1																																														1
CAGCA		1																																													1
CATAA		1																																													1
CATAT	3	1																																													4
CATCA	2																																														2
CATCT	1																																														1
CATTA	1			1																																											2
CATTC	3																																														3
CATTG	1																																														1
CATTT	3																																														3
CCAAA	3																																														3
CCAAG	1																																														1
CCAAT	4																																														4
CCACA	1																																														1
CCACT	1																																														1
CCATT	1																																														1
CCCCT	1																																														1
CCTAT	1																																														1
CCTTA	1																																														1
CCTTT	1	1																																													2
CGATC		1																																													1
CGCCG	1																																														1
CGTTT	1																																														1
CTAAA	4	3																																													7
CTAAC	1																																														1
CTAAT	4																																														4
CTACA	1																																														1
CTACT	1																																														1
CTATA		1																																													1
CTATT	5	1																																													6
CTCAA	4																																														4
CTCCA	1																																														1
CTCTA	2																																														2
CTGAT	1																																														1
CTGTA	1																																														1
CTGTG	1																																														1
CTTAT	1																																														1
CTTCA	1	1																																													2
CTTCT	2																																														2
CTTGA	2																																														2
CTTTA	1	1																																													2
CTTTC	2																																														2
CTTTG	3																																														3
CTTTT	2																																														2
GAAAA	4																																														4
GAAAG	2																																														2
GAAAT	1	1																																													2
GAAGT	1																																														1
GAATA	3																																														3
GAATC	1																																														1
GAATG	3																																														3
GAATT	3	4																																													7
GAGAT	3																																														3
GATAA	3																																														3
GATAG	1																																														1
GATAT	3	1																																													4
GATCG		1																																													1
GATCT	1																																														1
GATGA	1																																														1
GATGT	1																																														1
GATTA	4																																														4
GATTC	1		1																																												2
GATTG	7	2																																													9
GATTT	4																																														4
GCAAA	1																																														1
GCATA	1																																														1
GCATT	1																																														1
GCGAC	1																																														1
GCGGC	1																																														1
GCTGA	1																																														1
GGAAA	1																																														1
GGAAG	1																																														1
GGAAT	3																																														3
GGATC	1																																														1
GGATT	3																																														3
GGTGA	1																																														1
GGTTG	1																																														1
GGTTT	1	1	1																																												3
GTAAT	1																																														1
GTAGA	2																																														2
GTAGT	2																																														2
GTATA	4																																														4
GTATC	1	1																																													2
GTATT	3																																														3
GTGAA	3																																														3
GTGAT	2																																														2
GTGTA	2																																														2
GTGTG	2																																														2
GTGTT	3																																														3
GTTCT	1	1																																													2
GTTGA	2																																														2
GTTGG	1																																														1
GTTGT	2	1																																													3
GTTTA	4																																														4
GTTTG	13	2																																													15
GTTTT	9	1																																													10
TAAAA	13	3																																													16
TAAAC	7																																														7
TAAAG		2																																													2
TAAAT	9																																														9
TAACA	1		1																																												2
TAAGA		1																																													1
TAAGG	1																																														1
TAATA	25	3	2																																												30
TAATC	7																																														7
TAATG	1	1																																													2
TAATT	10																																														10
TACAA	3	1																																													4
TACAT	2																																														2
TACCA	1																																														1
TACCT	1																																														1
TACTA	4	1																																													5
TACTC	2	1																																													3
TACTT		1		1																																											2
TAGAA	5	2																																													7
TAGAC	1																																														1
TAGAG	1	1																																													2
TAGAT	5																																														5
TAGCT	1																																														1
TAGGT	1																																														1
TAGTC	1																																														1
TAGTG	1																																														1
TAGTT	10																																														10
TATAA	19	6																																													25
TATAC	5																																														5
TATAG	9	2																																													11
TATAT	36	7	1					1																																							45
TATCA	2	1																																													3
TATCC	2																																														2
TATCT	4	1																																													5
TATGA	8																																														8
TATGC		1	1																																												2
TATGG	1																																														1
TATGT	5	2																																													7
TATTA	37	6	2																																												45
TATTC	5	1	2																																												8
TATTG	7	1																																													8
TATTT	11																																														11
TCAAA	14	2			1																																										17
TCAAC	4																																														4
TCAAG	1																																														1
TCAAT	10																																														10
TCACA	1																																														1
TCACC	2																																														2
TCACT	2	1																																													3
TCAGA	1																																														1
TCAGC		1																																													1
TCAGT	2																																														2
TCATA	5		1																																												6
TCATC	1																																														1
TCATT	3	1																																													4
TCCAA	1																																														1
TCCAC	1																																														1
TCCAG	1																																														1
TCCAT	1																																														1
TCCTT	2																																														2
TCGAA	2	1																																													3
TCTAA	2	1																																													3
TCTAC	1																																														1
TCTAG	1																																														1
TCTAT	9	1																																													10
TCTCT			1																																												1
TCTTC	2																																														2
TCTTT	7																																														7
TGAAA	5	1																																													6
TGAAT	2																																														2
TGACT	1																																														1
TGAGG	2																																														2
TGATA	9	2																																													11
TGATG	2																																														2
TGATT	10	6			1																																										17
TGCAA	1																																														1
TGCAT	1																																														1
TGCTC		1																																													1
TGCTT	1	1																																													2
TGGAA	2																																														2
TGGAT	6	1																																													7
TGGTG	2																																														2
TGGTT	2							1																																							3
TGTAA	1																																														1
TGTAT	2	2																																													4
TGTCC	1																																														1
TGTCT	1																																														1
TGTGA	1																																														1
TGTGG	1																																														1
TGTGT	6	1																																													7
TGTTA	1																																														1
TGTTC	1	1																																													2
TGTTG	3	1																																													4
TGTTT	5																																														5
TTAAA	5	2																																													7
TTAAT	13																																														13
TTAGA	1																																														1
TTAGT	2	2	1																																												5
TTATA	23	4		1																																											28
TTATC	2																																														2
TTATG	3	1																																													4
TTATT	13																																														13
TTCAA	4	1																																													5
TTCAC	1																																														1
TTCAT	4	1																																													5
TTCCT	1																																														1
TTCTA	7																																														7
TTCTC	2																																														2
TTCTG		3																																													3
TTCTT	4	1	1																																												6
TTGAA	12	4																																													16
TTGAG	1																																														1
TTGAT	14	8		1																																											23
TTGCA	2																																														2
TTGCT	3																																														3
TTGGA	1																																														1
TTGGT	7		1																																												8
TTGTA	6																																														6
TTGTC		1																																													1
TTGTG	4																																														4
TTGTT	18	1	3																																												22
TTTAA	17																																														17
TTTAC	3																																														3
TTTAG	7																																														7
TTTAT	20	3	1																																												24
TTTCA	2																																														2
TTTCT	3	1																																													4
TTTGA	15	4																																													19
TTTGC	5	1																																													6
TTTGG	4	1																																													5
TTTGT	17	4	3						1																																						25
TTTTA	24	2																																													26
TTTTC	3	2																																													5
TTTTG	18	2	1							1																																					22
AAAAAC	4																																														4
AAAAAG	2																																														2
AAAAAT	5																																														5
AAAACA	3																																														3
AAAACT	1	1																																													2
AAAAGA	2																																														2
AAAAGC	1																																														1
AAAATA	3																																														3
AAAATC	1																																														1
AAACAA	2																																														2
AAACTA	1	1																																													2
AAACTT	1																																														1
AAAGAA	4																																														4
AAAGAG	3																																														3
AAAGAT	2	1	1																																												4
AAAGGA	1																																														1
AAATAA	1																																														1
AAATAC	1																																														1
AAATAG	1																																														1
AAATAT	5																																														5
AAATCA	3																																														3
AAATCC	1																																														1
AAATGA	1																																														1
AAATGT	2																																														2
AAATTC	2																																														2
AAATTT	2																																														2
AACAAA	3																																														3
AACAAT	11																																														11
AACACA	1																																														1
AACACC	1																																														1
AACAGT	1																																														1
AACATC	1	2																																													3
AACCAA		1																																													1
AACTAC		2																																													2
AACTCC	1																																														1
AACTTG	1																																														1
AAGAAA	2																																														2
AAGAGA	3																																														3
AAGATC	1																																														1
AAGATG	1																																														1
AAGGAA	1																																														1
AAGGAG	2			1																																											3
AAGGGT	1	1																																													2
AAGTAG		1																																													1
AAGTCA	1																																														1
AAGTGG	1																																														1
AAGTTC	1																																														1
AATAAA	2																																														2
AATAAC	7	1	1																																												9
AATACC	1																																														1
AATACT	1																																														1
AATAGC	1																																														1
AATAGG	1																																														1
AATAGT	10	1																																													11
AATATA	2								1																																						3
AATATC	1																																														1
AATATT	5																																														5
AATCAA	3																																														3
AATCAT	1																																														1
AATCGG	1																																														1
AATCTA	1																																														1
AATGAA		1																																													1
AATGAC		1																																													1
AATGAG	1																																														1
AATGAT	1																																														1
AATGCT		1	1																																												2
AATGGA	2																																														2
AATGGC	1																																														1
AATGGT	1																																														1
AATTAG	1																																														1
AATTAT	3																																														3
AATTCA	14	1																																													15
AATTGA		1																																													1
AATTTA	1																																														1
AATTTC	1																																														1
AATTTG	5																																														5
AATTTT	1																																														1
ACAAAA		1																																													1
ACAAAT	2																																														2
ACAACC	3																																														3
ACAACT	4																																														4
ACAATA	1																																														1
ACACAT	2																																														2
ACAGCA	4																																														4
ACATAC	1																																														1
ACATCA	3																																														3
ACCAAA	1																																														1
ACCAAC	2																																														2
ACCACT	4																																														4
ACCAGA	1																																														1
ACCCTT	3					1																																									4
ACCTCC	1																																														1
ACGACC	1																																														1
ACGATG	1																																														1
ACGGTC	1																																														1
ACTAAA	1																																														1
ACTACA	4																																														4
ACTATT	3	2																																													5
ACTTTC	1																																														1
AGAAAA	1																																														1
AGAAAG	2																																														2
AGAAAT		1																																													1
AGAACA		1																																													1
AGAACG				1																																											1
AGAAGT	2	1																																													3
AGAGAA	4																																														4
AGAGAC	3					1																																									4
AGAGAT	3																																														3
AGAGGA	1																																														1
AGATAA	1																																														1
AGATAG	4	1																																													5
AGATAT	3	1																																													4
AGATCA	3																																														3
AGATGA	1																																														1
AGATGT	1																																														1
AGATTT	1	1																																													2
AGCAAC	2																																														2
AGCAAT	1																																														1
AGCAGA	1																																														1
AGCAGT	2																																														2
AGCATC	1																																														1
AGGCTG	1																																														1
AGGGAC	1																																														1
AGGGAT	1																																														1
AGGGTA				1	2		2		1																																						6
AGTAAT	4																																														4
AGTAGA	2																																														2
AGTAGC	1																																														1
AGTGAT	1																																														1
AGTGTA	1																																														1
AGTTAG	1																																														1
AGTTGA	1																																														1
AGTTGG	1	1																																													2
AGTTTT	1																																														1
ATAAAA	2																																														2
ATAAAC	1																																														1
ATAAAT	3																																														3
ATAACA	2																																														2
ATAACT	1																																														1
ATAATC	1																																														1
ATAATG	1																																														1
ATAATT	2	1																																													3
ATACAT	1																																														1
ATACTG	1																																														1
ATACTT	1																																														1
ATAGAA	1																																														1
ATAGAG	1				1																																										2
ATAGAT	6																																														6
ATAGGG	1	1																																													2
ATAGTA	5		1																																												6
ATAGTT		1																																													1
ATATAA	1	1																																													2
ATATAC	2	1																																													3
ATATAG	2																																														2
ATATCT	2																																														2
ATATGT	1																																														1
ATATTA	4																																														4
ATATTG	1	1																																													2
ATATTT	3	1																																													4
ATCAAA			1																																												1
ATCAAC	1																																														1
ATCAAT	1	1																																													2
ATCACC	1																																														1
ATCACT		2																																													2
ATCAGA	1																																														1
ATCATT	4		1																																												5
ATCGGT	1																																														1
ATCGTA	1																																														1
ATCGTC	1																																														1
ATCTAA	2	1																																													3
ATCTAT	2																																														2
ATCTCT	1																																														1
ATCTTC	2																																														2
ATCTTG	1																																														1
ATCTTT	3																																														3
ATGAAG	1																																														1
ATGAAT	1	1																																													2
ATGACA	1																																														1
ATGACC	1																																														1
ATGAGA		1																																													1
ATGGCC	1																																														1
ATGTAG	1																																														1
ATGTAT	1																																														1
ATGTGA	2																																														2
ATGTGG	1																																														1
ATGTGT	2																																														2
ATTAAC		1																																													1
ATTAAT	2																																														2
ATTACA	1																																														1
ATTACT	2																																														2
ATTATA	2																																														2
ATTATC	3																																														3
ATTATG	1	1																																													2
ATTCAT	1																																														1
ATTCCA	1																																														1
ATTGAA	1																																														1
ATTGGA	2																																														2
ATTGGT	2																																														2
ATTGTG	1																																														1
ATTGTT	1																																														1
ATTTAT	4	1																																													5
ATTTCC	1																																														1
ATTTGA	2																																														2
ATTTGC	1																																														1
ATTTTA	1																																														1
ATTTTT	2																																														2
CAAAAA	4																																														4
CAAAAG	1																																														1
CAAATA	1																																														1
CAACAC	2																																														2
CAACAG	16	1						1																																							18
CAACTA	4																																														4
CAAGAA	2																																														2
CAAGAT	1																																														1
CAAGCT		1																																													1
CAATAA	4																																														4
CAATAC	1																																														1
CAATAG	1																																														1
CAATAT	1																																														1
CAATCA	1																																														1
CAATGA	1																																														1
CACAAC				1																																											1
CACACC	1																																														1
CACACT	1																																														1
CACCAA			1																																												1
CACCAG			1																																												1
CACCAT	1																																														1
CACCTC	1																																														1
CACGAT		1																																													1
CACTTC		1																																													1
CAGAAG	2																																														2
CAGCAA	6																																														6
CAGCAT			1																																												1
CAGCTA	1																																														1
CATCAA	1	1																																													2
CATCAC	2																																														2
CATCGA	1																																														1
CATCTT	3																																														3
CATGAT	2																																														2
CATTAC	1																																														1
CATTAT	1																																														1
CATTTC		1																																													1
CCAAAA	1																																														1
CCAAAT	2																																														2
CCAACA	1	1																																													2
CCACAT	1																																														1
CCACCT	2																																														2
CCAGAG	1																																														1
CCAGCA	2																																														2
CCAGCT	1	1																																													2
CCATTA	1																																														1
CCATTT		1																																													1
CCCCTG		1																																													1
CCCTTA						1																																									1
CCTCCA	2																																														2
CCTCTT		1																																													1
CCTGAA	1																																														1
CCTGAG	1																																														1
CCTGAT	1																																														1
CCTGGC	1																																														1
CCTTAC			1									1																																			2
CGACTA	1																																														1
CGGCCT	1																																														1
CGTGGA	1																																														1
CTAAAT	1																																														1
CTACAA	1																																														1
CTACTG	1	1																																													2
CTACTT	1																																														1
CTATAT		1																																													1
CTATCA		1																																													1
CTATCC	1																																														1
CTATCT		1		1																																											2
CTATTA	6																																														6
CTATTC	1																																														1
CTATTG	1	1																																													2
CTATTT	1																																														1
CTCATC	1																																														1
CTCCAG	1																																														1
CTCCCA		1																																													1
CTCCTG	1																																														1
CTCTGA	1																																														1
CTCTTA	1																																														1
CTCTTC		1																																													1
CTCTTT	1																																														1
CTGCTA		1																																													1
CTGCTT	1																																														1
CTGGAG	1																																														1
CTGGTG	1																																														1
CTGGTT	1																																														1
CTGTCT	2	1																																													3
CTGTTG	3																																														3
CTTACC	1			1			1						1	1																																	5
CTTCAC	1																																														1
CTTCAT	1			1																																											2
CTTCCA	1																																														1
CTTCCG	1																																														1
CTTCCT	2																																														2
CTTCTA	2		1																																												3
CTTCTC	1	1																																													2
CTTTCA	1																																														1
CTTTCT	1																																														1
CTTTTA	1																																														1
CTTTTT	4																																														4
GAAAAA	3																																														3
GAAAAG	1																																														1
GAAAGA	2																																														2
GAACCA	1																																														1
GAACCT		1																																													1
GAACTT	1																																														1
GAAGAC	1	1																																													2
GAAGAG	4																																														4
GAAGAT	1																																														1
GAAGGA	1	1																																													2
GAAGTA	1																																														1
GAATTT	1	2																																													3
GACTTT	1																																														1
GAGAAA	1																																														1
GAGATA	1																																														1
GAGCAA	1																																														1
GAGGAA	2																																														2
GAGTTG	1																																														1
GATAAT	1																																														1
GATAGA	2																																														2
GATAGG	1																																														1
GATATA	1																																														1
GATATT		1																																													1
GATCTT	1																																														1
GATGAA	8																																														8
GATGAC	3																																														3
GATGAG	1																																														1
GATGCT	2																																														2
GATGGT	1																																														1
GATTTA		2																																													2
GATTTG	2																																														2
GCAACA	4																																														4
GCAATA	1																																														1
GCAATG	1																																														1
GCACAA	1																																														1
GCAGGT	1																																														1
GCAGTA	1																																														1
GCATCA	1	3	2	1																																											7
GCATCC	5	1																																													6
GCATCG	3	4		1																																											8
GCATTG	1																																														1
GCATTT		1																																													1
GCGTCA		1	1																																												2
GCGTCG	2		1																																												3
GCTCTG	1																																														1
GCTGGA				1																																											1
GCTGGT	1	1																																													2
GCTGTT	1																																														1
GGAAAA		1																																													1
GGAAAG	1																																														1
GGAAGA		1																																													1
GGAAGT		1																																													1
GGAGGT	1																																														1
GGATGA		3																																													3
GGATGT	1																																														1
GGCTGA	1																																														1
GGGTAA	1																																														1
GGTAAG					1	1																																									2
GGTATT	1	1					1																																								3
GGTGAG	1																																														1
GGTGGA	2																																														2
GTAATA	1																																														1
GTAATG	2																																														2
GTAGTG		1																																													1
GTATTG	2																																														2
GTCAAA	1																																														1
GTCAGA	2																																														2
GTCATA	1																																														1
GTCGTT	2																																														2
GTGAGA	1																																														1
GTGGTA	2																																														2
GTGTGA	1																																														1
GTTATT	1																																														1
GTTGAA	2		1																																												3
GTTGCT	1	1																																													2
GTTGGA	1																																														1
GTTGGT	2																																														2
GTTGTA	3	1																																													4
GTTGTC	1																																														1
GTTTTA	1																																														1
GTTTTT	1																																														1
TAAAAA	4																																														4
TAAAAT	1																																														1
TAAAGG	1																																														1
TAAATA	8			1																																											9
TAAATC		1																																													1
TAAATT	1																																														1
TAACAA	4																																														4
TAACAG	1																																														1
TAAGGG	1	2																																													3
TAATAG	4	1																																													5
TAATAT	3																																														3
TAATGA	1																																														1
TAATTA	2																																														2
TAATTT	1	1																																													2
TACAAC	3																																														3
TACATA	1																																														1
TACCAT	1																																														1
TACCCT	2					1				1																																					4
TACTAT	11	1																																													12
TACTGA	1																																														1
TACTGT	1																																														1
TACTTC	1																																														1
TAGAAT	1																																														1
TAGACA	1																																														1
TAGAGA	1																																														1
TAGATA	2																																														2
TAGCAA	2																																														2
TAGTAA	4	1																																													5
TAGTGG	2																																														2
TATAAA	1																																														1
TATAAC	2																																														2
TATAAT	2																																														2
TATACA	1																																														1
TATAGA	2	1																																													3
TATATC	7																																														7
TATATT	4																																														4
TATCAA		1																																													1
TATCTA	3																																														3
TATCTC		1																																													1
TATCTT	1																																														1
TATGAA	2																																														2
TATGTA	2																																														2
TATTAA	6																																														6
TATTAC	14	1			1																																										16
TATTAG	1																																														1
TATTGA	2	1																																													3
TATTGT	7																																														7
TATTTA	6	1																																													7
TATTTC	1																																														1
TATTTG	1																																														1
TATTTT	2																																														2
TCAAAA	1																																														1
TCAAAC	1																																														1
TCAAAT	1																																														1
TCAACA		1																																													1
TCAACC	1																																														1
TCAAGC			1																																												1
TCAATA	2																																														2
TCACAC	1																																														1
TCACCA			1																																												1
TCACCT	1																																														1
TCACGT	1																																														1
TCACTC	1																																														1
TCACTT		2																																													2
TCAGAG	1																																														1
TCAGCA	1	1	1																																												3
TCAGCG	1	3	1		1																																										6
TCAGTC	1																																														1
TCATAA	1																																														1
TCATCG	2																																														2
TCATCT	2																																														2
TCATTA	2																																														2
TCCAAC	1																																														1
TCCAAT			1																																												1
TCCACC	2																																														2
TCCGAA	1																																														1
TCCGCG	1	1																																													2
TCCTCG	1																																														1
TCCTCT	2																																														2
TCCTTC		1			1																																										2
TCGAAT	1																																														1
TCGCCG	1																																														1
TCGGAA	1																																														1
TCGGCA		1																																													1
TCGGCG	1		1																																												2
TCTACA	1																																														1
TCTATC	1	1																																													2
TCTCAT	1																																														1
TCTCTA	6				1																																										7
TCTCTG	2	1				1		1																																							5
TCTCTT	6				1				1																																						8
TCTGAC	2																																														2
TCTGTC	1																																														1
TCTTCA	6																																														6
TCTTCC	5																																														5
TCTTGG	1																																														1
TCTTTC	6	2																																													8
TCTTTT	4																																														4
TGAAAG	1																																														1
TGAACC		1																																													1
TGAAGT	1																																														1
TGACTC	1																																														1
TGACTG	1																																														1
TGAGCT	1		2																																												3
TGAGTT	1																																														1
TGATGC	1																																														1
TGATGT	7	1																																													8
TGATTA	1	1																																													2
TGATTC		1																																													1
TGATTG	2																																														2
TGATTT	1																																														1
TGCTAC	2																																														2
TGCTCA	1																																														1
TGCTGA	1																																														1
TGCTGT	8						1																																								9
TGGAAA		2																																													2
TGGACA	1																																														1
TGGAGC	2	1																																													3
TGGAGG	1																																														1
TGGAGT	1																																														1
TGGATT	1																																														1
TGGTAG	1	1																																													2
TGGTGT	3	1																																													4
TGGTTT	1																																														1
TGTAGT	4																																														4
TGTATA	1	1																																													2
TGTATC	1																																														1
TGTATT	1					1																																									2
TGTCCA	1																																														1
TGTCTA	1																																														1
TGTGAT	2																																														2
TGTGGT	2																																														2
TGTGTT		1																																													1
TGTTAA	1																																														1
TGTTAT	4																																														4
TGTTGA	3	1			1																																										5
TGTTGC	12	2	1		1																																										16
TTAAAA	1																																														1
TTAATA	2	1																																													3
TTAATT	4																																														4
TTACCC	2	1	1																																												4
TTACTA	1																																														1
TTAGAT	2																																														2
TTAGTT	1																																														1
TTATAT	3	1																																													4
TTATCA	1																																														1
TTATCT	1																																														1
TTATTG	3		1																																												4
TTATTT	1																																														1
TTCAAA	3																																														3
TTCACG	4	1																																													5
TTCACT		1																																													1
TTCAGA	1																																														1
TTCATA	3																																														3
TTCATC	1																																														1
TTCATG	1																																														1
TTCCAC	6																																														6
TTCCTC	1																																														1
TTCTAT	1																																														1
TTCTCC	2	1																																													3
TTCTCT	4	1					1																																								6
TTGAAT	2																																														2
TTGATC	1																																														1
TTGATG		1																																													1
TTGATT	1																																														1
TTGCAG	1																																														1
TTGCTC	1																																														1
TTGCTG	4	1																																													5
TTGGTA	1																																														1
TTGTAA	1																																														1
TTGTAG	3																																														3
TTGTAT	1			1																																											2
TTGTGA	2	1																																													3
TTGTGC	1																																														1
TTGTGG	1																																														1
TTGTTA	8																																														8
TTGTTC	1																																														1
TTGTTT	4																																														4
TTTAAA	2		1																																												3
TTTAAT	1																																														1
TTTATA	3																																														3
TTTATC	2	1																																													3
TTTATG	1																																														1
TTTATT	2																																														2
TTTCAT	1																																														1
TTTCCT	2																																														2
TTTCTA	1																																														1
TTTCTC	4																																														4
TTTCTT	1																																														1
TTTGAA	2																																														2
TTTGAT	1																																														1
TTTGGT	2																																														2
TTTGTA	1																																														1
TTTTAA	4																																														4
TTTTAT	4																																														4
TTTTGA	1																																														1
TTTTGG	2																																														2
TTTTGT	1																																														1
TTTTTA	2																																														2
TTTTTC	1																																														1
TTTTTG	3																																														3

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	31	22	22	10	19	12	11	9	5	3	6	5	4	4	3	2	1												1	170
AC/GT	-	-	-	124	54	24	13	8	7	2	2	1		1	1																																237
AG/CT	-	-	-	43	8	12	4	3		1					1																																72
AT/AT	-	-	-	624	275	168	78	52	35	14	11	1	2	2					1					1																							1264
AAC/GTT	-	-	843	381	155	77	26	13	7	7	6		5		2	1	1	1	1																			1									1527
AAG/CTT	-	-	102	34	12	4	3																																								155
AAT/ATT	-	-	1653	780	398	199	98	48	27	13	18	12	11	15	7	5	5	5	5	1	2	1	2	1				1																			3307
ACC/GGT	-	-	49	12	5	1	1																																								68
ACG/CGT	-	-	12	8																																											20
ACT/AGT	-	-	177	59	16	11	5	2	3		1					1		2							1		1																				279
AGC/CTG	-	-	60	19	6	1	1		2			1			1																																91
AGG/CCT	-	-	8	3																																											11
ATC/ATG	-	-	225	97	30	17	3	3		3	1					2																															381
CCG/CGG	-	-	4	1																																											5
AAAC/GTTT	-	80	14	7	2																																										103
AAAG/CTTT	-	45	13	4	1			1																																							64
AAAT/ATTT	-	303	103	30	10	3	3	1	1	2		1																																			457
AACC/GGTT	-	43	9	4	1				1																																						58
AACG/CGTT	-	1																																													1
AACT/AGTT	-	29	8	1																																											38
AAGC/CTTG	-	5	3																																												8
AAGG/CCTT	-	1																																													1
AAGT/ACTT	-	5		1																																											6
AATC/ATTG	-	350	132	46	16	3	3	3		2	1						1																														557
AATG/ATTC	-	107	38	10	3	1					1																																				160
AATT/AATT	-	68	8	2		1																																									79
ACAG/CTGT	-	8	3																																												11
ACAT/ATGT	-	32	8	4																																											44
ACCC/GGGT	-	2																																													2
ACCG/CGGT	-	1																																													1
ACCT/AGGT	-	4	2	1																																											7
ACTC/AGTG	-	17	5	1																																											23
ACTG/AGTC	-	21	1	1																																											23
AGAT/ATCT	-	213	71	23	5				1				1			1	1				1																										317
AGCC/CTGG	-	1																																													1
AGCT/AGCT	-	1																																													1
AGGC/CCTG	-	1																																													1
ATCC/ATGG	-	20	3	4			1																																								28
ATCG/ATCG	-	2																																													2
ATGC/ATGC	-	1																																													1
AAAAC/GTTTT	110	11	8						1	1																																					131
AAAAG/CTTTT	40	6	3																																												49
AAAAT/ATTTT	153	15	1																																												169
AAACC/GGTTT	59	11	6					1																																							77
AAACG/CGTTT	1																																														1
AAACT/AGTTT	58	8	2																																												68
AAAGC/CTTTG	20	4																																													24
AAAGG/CCTTT	10	3	1																																												14
AAAGT/ACTTT	6	7	1	1																																											15
AAATC/ATTTG	122	41	10	1	2																																										176
AAATG/ATTTC	36	8																																													44
AAATT/AATTT	138	10																																													148
AACAC/GTGTT	35	5																																													40
AACAG/CTGTT	3	7																																													10
AACAT/ATGTT	19	4	1																																												24
AACCC/GGGTT	2																																														2
AACCT/AGGTT	3																																														3
AACTC/AGTTG	13																																														13
AACTG/AGTTC	3																																														3
AAGAC/CTTGT	2	2																																													4
AAGAG/CTCTT	14	2	1								1																																				18
AAGAT/ATCTT	16	4																																													20
AAGCC/CTTGG	2																																														2
AAGCT/AGCTT	1																																														1
AAGGG/CCCTT	1																																														1
AAGGT/ACCTT	3																																														3
AAGTC/ACTTG	4																																														4
AAGTG/ACTTC	12	2																																													14
AATAC/ATTGT	51	6	2																																												59
AATAG/ATTCT	68	13	3																																												84
AATAT/ATATT	268	50	12	1		1	2	3																																							337
AATCC/ATTGG	38	9																																													47
AATCG/ATTCG	7	2	1																																												10
AATCT/AGATT	39	8	2																																												49
AATGC/ATTGC	9																																														9
AATGG/ATTCC	21																																														21
AATGT/ACATT	15	1		1																																											17
AATTC/AATTG	60	15	1	1																																											77
ACACC/GGTGT	12																																														12
ACACG/CGTGT	1																																														1
ACACT/AGTGT	14																																														14
ACAGC/CTGTG	1	1																																													2
ACAGG/CCTGT	1																																														1
ACAGT/ACTGT	2																																														2
ACATC/ATGTG	15																																														15
ACATG/ATGTC	1																																														1
ACCAT/ATGGT	3																																														3
ACCCC/GGGGT	1																																														1
ACCGG/CCGGT	1																																														1
ACCTC/AGGTG	7																																														7
ACGAT/ATCGT	1	1																																													2
ACGCG/CGCGT	1																																														1
ACTAG/AGTCT	4																																														4
ACTAT/AGTAT	37	4																																													41
ACTCC/AGTGG	8																																														8
ACTCG/AGTCG	1																																														1
ACTCT/AGAGT	14	2	1																																												17
ACTGG/AGTCC	2																																														2
AGAGC/CTCTG		1																																													1
AGATC/ATCTG	5																																														5
AGATG/ATCTC	10																																														10
AGCAT/ATGCT	1	1	1																																												3
AGCTC/AGCTG	1	1																																													2
AGGAT/ATCCT	7																																														7
AGGGG/CCCCT	1																																														1
ATATC/ATATG	51	9	1																																												61
ATCCC/ATGGG	1																																														1
ATCCG/ATCGG	1	2																																													3
ATCGC/ATGCG	1																																														1
CCGCG/CGCGG	2																																														2
AAAAAC/GTTTTT	25	1																																													26
AAAAAG/CTTTTT	24																																														24
AAAAAT/ATTTTT	30																																														30
AAAACC/GGTTTT	7	1																																													8
AAAACT/AGTTTT	6	2																																													8
AAAAGC/CTTTTG	2																																														2
AAAAGG/CCTTTT	5	1																																													6
AAAAGT/ACTTTT	1																																														1
AAAATC/ATTTTG	12		1																																												13
AAAATG/ATTTTC	2	1																																													3
AAAATT/AATTTT	14	1																																													15
AAACAC/GTGTTT	1	1																																													2
AAACAT/ATGTTT	2																																														2
AAACTC/AGTTTG	2																																														2
AAACTT/AAGTTT	1																																														1
AAAGAG/CTCTTT	37	3			1		1		1																																						43
AAAGAT/ATCTTT	10	2	1																																												13
AAAGGG/CCCTTT	1																																														1
AAAGGT/ACCTTT	1																																														1
AAAGTC/ACTTTG	3																																														3
AAAGTG/ACTTTC	3	3																																													6
AAATAC/ATTTGT	8			1		1																																									10
AAATAG/ATTTCT	6	1																																													7
AAATAT/ATATTT	43	5		1					1																																						50
AAATCC/ATTTGG	6																																														6
AAATCT/AGATTT	7	5																																													12
AAATGC/ATTTGC	1	1																																													2
AAATGG/ATTTCC	3	4																																													7
AAATGT/ACATTT	2																																														2
AAATTC/AATTTG	32	3																																													35
AAATTG/AATTTC	2	1																																													3
AAATTT/AAATTT	6		1																																												7
AACAAG/CTTGTT	3	1																																													4
AACAAT/ATTGTT	53	1	2																																												56
AACACC/GGTGTT	11	2	1																																												14
AACAGC/CTGTTG	61	5	1		1		1	1																																							70
AACAGT/ACTGTT	3																																														3
AACATC/ATGTTG	16	7			1																																										24
AACATG/ATGTTC	1																																														1
AACATT/AATGTT	1	1																																													2
AACCAC/GGTTGT	6			1																																											7
AACCAG/CTGGTT	3																																														3
AACCTC/AGGTTG	1																																														1
AACCTG/AGGTTC	1	2																																													3
AACGAC/CGTTGT	3																																														3
AACGAG/CGTTCT				1																																											1
AACGTG/ACGTTC	5	1																																													6
AACTAC/AGTTGT	26	3																																													29
AACTAT/AGTTAT	3	1																																													4
AACTCC/AGTTGG	6	1																																													7
AACTCT/AGAGTT	1																																														1
AACTGC/AGTTGC	1																																														1
AACTTC/AAGTTG	4		1																																												5
AACTTG/AAGTTC	3																																														3
AAGACC/CTTGGT	1																																														1
AAGACG/CGTCTT	1	1																																													2
AAGAGC/CTCTTG	2																																														2
AAGAGG/CCTCTT	17	3																																													20
AAGAGT/ACTCTT	1																																														1
AAGATC/ATCTTG	8																																														8
AAGATG/ATCTTC	27			1																																											28
AAGCAC/CTTGTG	2																																														2
AAGCAG/CTGCTT	4																																														4
AAGCGG/CCGCTT	1																																														1
AAGCTC/AGCTTG	1	1	3																																												5
AAGGAG/CCTTCT	6	4		1	1																																										12
AAGGGT/ACCCTT	11	4	2	2	3	4	3		1	1		1	1	1																																	34
AAGGTG/ACCTTC	2																																														2
AAGTAG/ACTTCT	9	2	1																																												12
AAGTAT/ACTTAT	1																																														1
AAGTGG/ACTTCC	8	2																																													10
AAGTGT/ACACTT	1																																														1
AATACC/ATTGGT	8	1					1																																								10
AATACT/AGTATT	2																																														2
AATAGC/ATTGCT	7	1																																													8
AATAGG/ATTCCT	2																																														2
AATAGT/ACTATT	65	7	1		1																																										74
AATATC/ATATTG	8	5																																													13
AATATG/ATATTC	7	1																																													8
AATATT/AATATT	22	1																																													23
AATCAC/ATTGTG	8	1																																													9
AATCAG/ATTCTG	1	1																																													2
AATCAT/ATGATT	5	2																																													7
AATCCG/ATTCGG	1																																														1
AATCGG/ATTCCG	2																																														2
AATCGT/ACGATT	1																																														1
AATCTG/AGATTC	1																																														1
AATGAC/ATTGTC	2	1																																													3
AATGAG/ATTCTC	2	1																																													3
AATGAT/ATCATT	15		1																																												16
AATGCC/ATTGGC	1																																														1
AATGCT/AGCATT		1	1																																												2
AATGGC/ATTGCC	2																																														2
AATGGT/ACCATT	6																																														6
AATGTG/ACATTC	2																																														2
AATTAC/AATTGT	2																																														2
AATTAG/AATTCT	2																																														2
AATTAT/AATTAT	11	1																																													12
AATTCC/AATTGG	3		1																																												4
AATTCG/AATTCG	1																																														1
ACACAT/ATGTGT	5																																														5
ACACCC/GGGTGT	1																																														1
ACACTC/AGTGTG	3																																														3
ACAGAG/CTCTGT	8	2				2		1																																							13
ACAGAT/ATCTGT	1																																														1
ACAGCT/AGCTGT	1																																														1
ACAGGG/CCCTGT	1																																														1
ACAGTC/ACTGTG	1																																														1
ACATAG/ATGTCT	2																																														2
ACATAT/ATATGT	10	2																																													12
ACATCC/ATGTGG	3																																														3
ACATCG/ATGTCG	1																																														1
ACATCT/AGATGT	3																																														3
ACATGG/ATGTCC	2																																														2
ACCACG/CGTGGT	1																																														1
ACCACT/AGTGGT	9	2																																													11
ACCAGC/CTGGTG	4	1	1																																												6
ACCATC/ATGGTG	5		1																																												6
ACCATG/ATGGTC	1																																														1
ACCCTC/AGGGTG	1																																														1
ACCGAT/ATCGGT	1																																														1
ACCGTG/ACGGTC	1																																														1
ACCTCC/AGGTGG	12																																														12
ACCTGC/AGGTGC	1																																														1
ACGACT/AGTCGT	1																																														1
ACGAGG/CCTCGT	1																																														1
ACGATC/ATCGTG		1																																													1
ACGATG/ATCGTC	7																																														7
ACGCCG/CGGCGT	3		2																																												5
ACGCGG/CCGCGT	1	1																																													2
ACGCTG/AGCGTC	1	4	2		1																																										8
ACGGCG/CCGTCG	1																																														1
ACGTCC/ACGTGG	1																																														1
ACTATC/AGTGAT	1	3																																													4
ACTATG/AGTCAT	1																																														1
ACTCCC/AGTGGG		1																																													1
ACTCTC/AGAGTG	2																																														2
ACTCTG/AGAGTC	7																																														7
ACTGAG/AGTCTC	1																																														1
ACTGAT/AGTATC	2																																														2
ACTGCT/AGCAGT	7	2																																													9
AGAGAT/ATCTCT	20	4		1	2																																										27
AGAGCC/CTCTGG	2																																														2
AGATAT/ATATCT	30	3																																													33
AGCAGG/CCTGCT	1																																														1
AGCATC/ATGCTG	7	4	4	1																																											16
AGCATG/ATGCTC	1																																														1
AGCCTC/AGGCTG	2																																														2
AGCCTG/AGGCTC	1																																														1
AGCTCC/AGCTGG	5	2		1																																											8
AGGATC/ATCCTG	1																																														1
AGGATG/ATCCTC	2	3																																													5
AGGCCG/CCTCGG	1																																														1
AGGGAT/ATCCCT	4	1																																													5
AGGGCC/CCCTGG	1																																														1
AGGGGC/CCCCTG		1																																													1
ATCATG/ATCATG	2																																														2
ATCCGC/ATGCGG	5	1																																													6
ATCGGC/ATGCCG	3	5		1																																											9
ATGGCC/ATGGCC	1																																														1
