Specifications
==============

Sequence source file: "/data/brick1/zmahmoud/africandsi-megassr/megassr-v3/results/hub_GCA_003402195.1/fasta/hub_GCA_003402195.1_genomic.fa"

Definement of microsatellites (unit size / minimum number of repeats):
(1/20) (2/6) (3/5) (4/4) (5/3) (6/3) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              14
Total size of examined sequences (bp):           23013483
Total number of identified SSRs:                 7501
Number of SSR containing sequences:              14
Number of sequences containing more than 1 SSR:  14
Number of SSRs present in compound formation:    679


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	4372
2	876
3	421
4	427
5	763
6	642

Frequency of identified SSR motifs
----------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	total
A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	428	339	279	232	192	165	129	97	62	58	49	26	19	16	14	10	10	6	9	4	11	2	2	2	1	4	1		1		6			1			1																			1										1																																																												1	1																																																																																		2180
C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3		2			2	1			1	1			1																																																																																																																																																																																																			11
G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2		1		2			1		2											1										1																																																																																																																																																																																		10
T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	370	345	288	254	214	173	131	120	54	49	27	27	16	21	11	15	11	6	3	3	5	2	2	2	3	2	1	1	1	2	4		1	1					1						1																																1						1																																				1																																																																																									1	2171
AC	-	-	-	14	8	7	1	3																																																																																																																																																																																																																										33
AG	-	-	-	11		1		1		1																																																																																																																																																																																																																								14
AT	-	-	-	163	58	35	23	18	14	14	9	4	9	3	2	5		1	1	2	2	1																																																																																																																																																																																																												364
CA	-	-	-	36	11	5	4	1	1																																																																																																																																																																																																																									58
CG	-	-	-	3	1																																																																																																																																																																																																																													4
CT	-	-	-	9	2		1					1																																																																																																																																																																																																																						13
GA	-	-	-	9	3		1					1							1																																																																																																																																																																																																															15
GC	-	-	-	4																																																																																																																																																																																																																														4
GT	-	-	-	21	8	3	3	1	1																																																																																																																																																																																																																									37
TA	-	-	-	107	43	36	16	12	12	13	12	1	4	9	1	2	2			1				1			1																																																																																																																																																																																																							273
TC	-	-	-	8	2		1				1							1																																																																																																																																																																																																																13
TG	-	-	-	29	9	5	2	1	1											1																																																																																																																																																																																																														48
AAC	-	-			1	1		1																																																																																																																																																																																																																										3
AAG	-	-	5	4			1																																																																																																																																																																																																																											10
AAT	-	-	6	2	2		1		1											1																																																																																																																																																																																																														13
ACA	-	-		1																																																																																																																																																																																																																														1
ACC	-	-	3	1																																																																																																																																																																																																																														4
ACT	-	-						1																																																																																																																																																																																																																										1
AGA	-	-	3	2	1	1	1					1																																																																																																																																																																																																																						9
AGC	-	-	3	1																																																																																																																																																																																																																														4
AGG	-	-	3	2	2																																																																																																																																																																																																																													7
AGT	-	-	1	1		1																																																																																																																																																																																																																												3
ATA	-	-	9	3	2		1																																																																																																																																																																																																																											15
ATC	-	-	2																																																																																																																																																																																																																															2
ATG	-	-	1	1																																																																																																																																																																																																																														2
ATT	-	-	4	2																																																																																																																																																																																																																														6
CAA	-	-	1																																																																																																																																																																																																																															1
CAC	-	-	2	1																																																																																																																																																																																																																														3
CAG	-	-	2	1	3	2																																																																																																																																																																																																																												8
CAT	-	-	2	1	1		1		1																																																																																																																																																																																																																									6
CCA	-	-	1																																																																																																																																																																																																																															1
CCG	-	-	2	1																																																																																																																																																																																																																														3
CCT	-	-	2	2	2																																																																																																																																																																																																																													6
CGA	-	-	1	1																																																																																																																																																																																																																														2
CGC	-	-	1																																																																																																																																																																																																																															1
CGT	-	-	1																																																																																																																																																																																																																															1
CTA	-	-	1			1																																																																																																																																																																																																																												2
CTC	-	-	6		2	1																																																																																																																																																																																																																												9
CTG	-	-	3	1	1	1																																																																																																																																																																																																																												6
CTT	-	-	8	5	2	1	2			1		1																																																																																																																																																																																																																						20
GAA	-	-	20	7	3	4	1		1		1																																																																																																																																																																																																																							37
GAC	-	-	4					1																																																																																																																																																																																																																										5
GAG	-	-	9	10	2	4	2																																																																																																																																																																																																																											27
GAT	-	-	5	5	1	2																																																																																																																																																																																																																												13
GCA	-	-	1		3																																																																																																																																																																																																																													4
GCC	-	-		1																																																																																																																																																																																																																														1
GCG	-	-	3																																																																																																																																																																																																																															3
GCT	-	-	2	3	1	1																																																																																																																																																																																																																												7
GGA	-	-	8	4																																																																																																																																																																																																																														12
GGC	-	-	1																																																																																																																																																																																																																															1
GGT	-	-	5	3		1																																																																																																																																																																																																																												9
GTA	-	-	1																																																																																																																																																																																																																															1
GTC	-	-	2																																																																																																																																																																																																																															2
GTG	-	-	7																																																																																																																																																																																																																															7
GTT	-	-	1	1																																																																																																																																																																																																																														2
TAA	-	-	2	1	1																																																																																																																																																																																																																													4
TAC	-	-	1	1																																																																																																																																																																																																																														2
TAG	-	-	2																																																																																																																																																																																																																															2
TAT	-	-	2		2	1	1			1	1																																																																																																																																																																																																																							8
TCA	-	-	4			1	2																																																																																																																																																																																																																											7
TCC	-	-	14	8	3	1	1	1		1																																																																																																																																																																																																																								29
TCG	-	-	1	1																																																																																																																																																																																																																														2
TCT	-	-	16	2	3			1					1																																																																																																																																																																																																																					23
TGA	-	-	5	1	1		1										1																																																																																																																																																																																																																	9
TGC	-	-	2	4	2	2																																																																																																																																																																																																																												10
TGG	-	-	1		1																																																																																																																																																																																																																													2
TGT	-	-	3																																																																																																																																																																																																																															3
TTA	-	-	3	2			1																				1																																																																																																																																																																																																							7
TTC	-	-	17	5	3	7																																																																																																																																																																																																																												32
TTG	-	-						1																																																																																																																																																																																																																										1
AAAC	-	8	2	1			1				1																																																																																																																																																																																																																							13
AAAG	-	3																																																																																																																																																																																																																																3
AAAT	-	25	4	3	4	4	2																																																																																																																																																																																																																											42
AACG	-	4	4																																																																																																																																																																																																																															8
AAGA	-	2			1																																																																																																																																																																																																																													3
AAGC	-			1																																																																																																																																																																																																																														1
AAGG	-	1	1																																																																																																																																																																																																																															2
AATA	-	8	3	1	2																																																																																																																																																																																																																													14
AATG	-			1																																																																																																																																																																																																																														1
AATT	-	4	2																																																																																																																																																																																																																															6
ACAA	-	2																																																																																																																																																																																																																																2
ACAT	-	3	2								1																																																																																																																																																																																																																							6
ACCT	-								1																																																																																																																																																																																																																									1
ACGA	-	2		1	1																																																																																																																																																																																																																													4
ACGC	-	2																																																																																																																																																																																																																																2
ACGT	-	1																																																																																																																																																																																																																																1
AGAA	-	1			1																																																																																																																																																																																																																													2
AGAC	-	1																																																																																																																																																																																																																																1
AGAT	-		1																																																																																																																																																																																																																															1
AGCT	-	1																																																																																																																																																																																																																																1
AGGA	-				1																																																																																																																																																																																																																													1
AGGC	-		1																																																																																																																																																																																																																															1
ATAA	-	2																																																																																																																																																																																																																																2
ATAC	-	4	1																																																																																																																																																																																																																															5
ATCC	-	1																																																																																																																																																																																																																																1
ATGT	-	4	3	1	1																																																																																																																																																																																																																													9
ATTA	-	2			1																																																																																																																																																																																																																													3
ATTC	-	1	1																																																																																																																																																																																																																															2
ATTT	-	9	8	1	2																																																																																																																																																																																																																													20
CAAA	-	1	3																																																																																																																																																																																																																															4
CAAG	-	1																																																																																																																																																																																																																																1
CAAT	-								1																																																																																																																																																																																																																									1
CACG	-	1																																																																																																																																																																																																																																1
CATA	-	6	2		1		1																																											1																																																																																																																																																																																11
CATC	-		1																																																																																																																																																																																																																															1
CATG	-	2																																																																																																																																																																																																																																2
CATT	-																																											1																																																																																																																																																																																						1
CCAT	-		2		1																																																																																																																																																																																																																													3
CGAA	-	1	2		1																																																																																																																																																																																																																													4
CGGA	-		2																																																																																																																																																																																																																															2
CGGT	-					1																																																																																																																																																																																																																												1
CGTA	-	1	1																																																																																																																																																																																																																															2
CGTC	-	1																																																																																																																																																																																																																																1
CGTG	-	1																																																																																																																																																																																																																																1
CGTT	-	1		1																																																																																																																																																																																																																														2
CTAA	-	1																																																																																																																																																																																																																																1
CTAG	-	1																																																																																																																																																																																																																																1
CTCA	-	1																																																																																																																																																																																																																																1
CTCG	-	1																																																																																																																																																																																																																																1
CTTA	-		1																																																																																																																																																																																																																															1
CTTC	-	1		1	2			1																																																																																																																																																																																																																										5
CTTG	-	2																																																																																																																																																																																																																																2
CTTT	-	1		1																																																																																																																																																																																																																														2
GAAA	-	3		1																																																																																																																																																																																																																														4
GAAC	-			3																																																																																																																																																																																																																														3
GAAT	-	1		1		1																																																																																																																																																																																																																												3
GACC	-		1																																																																																																																																																																																																																															1
GACT	-		1					1																																																																																																																																																																																																																										2
GATA	-	3																																																																																																																																																																																																																																3
GATG	-	1																																																																																																																																																																																																																																1
GCAA	-	1																																																																																																																																																																																																																																1
GCAC	-		1	1																																																																																																																																																																																																																														2
GCCT	-	1																																																																																																																																																																																																																																1
GCGA	-			1																																																																																																																																																																																																																														1
GCTA	-	2	1																																																																																																																																																																																																																															3
GGAA	-			1	1	1																																																																																																																																																																																																																												3
GGAC	-	1																																																																																																																																																																																																																																1
GGAG	-	1																																																																																																																																																																																																																																1
GGAT	-	2																																																																																																																																																																																																																																2
GGCT	-	1																																																																																																																																																																																																																																1
GGTC	-							1																																																																																																																																																																																																																										1
GTAC	-	4	2																																																																																																																																																																																																																															6
GTAT	-	5	6		1																																																																																																																																																																																																																													12
GTCA	-									1																																																																																																																																																																																																																								1
GTGC	-	1																																																																																																																																																																																																																																1
GTTC	-			1																																																																																																																																																																																																																														1
GTTT	-	2	2																																																																																																																																																																																																																															4
TAAA	-	7	8	2																																																																																																																																																																																																																														17
TAAT	-	2	2		1	1																																																																																																																																																																																																																												6
TACA	-	3			1		1																																																																																																																																																																																																																											5
TACG	-	7																																																																																																																																																																																																																																7
TAGC	-	6																																																																																																																																																																																																																																6
TATG	-	7	2	1		2	1																																																																																																																																																																																																																											13
TATT	-	7	2	1																																																																																																																																																																																																																														10
TCAT	-			1																																																																																																																																																																																																																														1
TCCA	-	1																																																																																																																																																																																																																																1
TCGA	-		1																																																																																																																																																																																																																															1
TCGT	-	1	2	2																																																																																																																																																																																																																														5
TCTT	-	1	1	1																																																																																																																																																																																																																														3
TGAA	-	1				1																																																																																																																																																																																																																												2
TGAG	-			1																																																																																																																																																																																																																														1
TGAT	-	2		1																																																																																																																																																																																																																														3
TGCC	-	1																																																																																																																																																																																																																																1
TGCT	-		1																																																																																																																																																																																																																															1
TGGA	-	1																																																																																																																																																																																																																																1
TGTA	-	3		1	1	1																																																																																																																																																																																																																												6
TGTC	-					1																																																																																																																																																																																																																												1
TGTT	-	1		1		1	1	1																																																																																																																																																																																																																										5
TTAA	-	2	3																																																																																																																																																																																																																															5
TTAT	-	5	1			1			1																																																																																																																																																																																																																									8
TTCA	-																								1																																																																																																																																																																																																									1
TTCC	-	1																																																																																																																																																																																																																																1
TTCG	-	1		1																																																																																																																																																																																																																														2
TTCT	-			1						1																																																																																																																																																																																																																								2
TTGA	-	1																																																																																																																																																																																																																																1
TTGG	-				1																																																																																																																																																																																																																													1
TTGT	-	1																																																																																																																																																																																																																																1
TTTA	-	13	3	5	3	2			1																																																																																																																																																																																																																									27
TTTC	-	3			1																				1																																																																																																																																																																																																									5
TTTG	-	5	2	1																																																																																																																																																																																																																														8
AAAAC	8	1																																																																																																																																																																																																																																9
AAAAG	10	4	1	1																																																																																																																																																																																																																														16
AAAAT	49	9	5	3																																																																																																																																																																																																																														66
AAACA	2	1			1																																																																																																																																																																																																																													4
AAACG			1																																																																																																																																																																																																																															1
AAAGA	6																																																																																																																																																																																																																																	6
AAAGC	7	5	1																																																																																																																																																																																																																															13
AAAGG	2		1																																																																																																																																																																																																																															3
AAAGT	1																																																																																																																																																																																																																																	1
AAATA	11	7	1	1							1					1																																																																																																																																																																																																																		22
AAATG	2																																																																																																																																																																																																																																	2
AAATT		1	1																																																																																																																																																																																																																															2
AACAA	1																																																																																																																																																																																																																																	1
AACAC	1																																																																																																																																																																																																																																	1
AACAG	2																																																																																																																																																																																																																																	2
AACCA				1																																																																																																																																																																																																																														1
AACGA		1																																																																																																																																																																																																																																1
AACGG	1																																																																																																																																																																																																																																	1
AAGAA	4	2																																																																																																																																																																																																																																6
AAGAG	1	1																																																																																																																																																																																																																																2
AAGCA	2																																																																																																																																																																																																																																	2
AAGCG	1																																																																																																																																																																																																																																	1
AAGGA	1																																																																																																																																																																																																																																	1
AATAA	21	5	3	1																																																																																																																																																																																																																														30
AATAC		1																																																																																																																																																																																																																																1
AATAT	2																																																																																																																																																																																																																																	2
AATGC	2																																																																																																																																																																																																																																	2
AATGT		1																																																																																																																																																																																																																																1
AATTA	3																																																																																																																																																																																																																																	3
AATTT		1																																																																																																																																																																																																																																1
ACAAA	1	2																																																																																																																																																																																																																																3
ACAAC					1																																																																																																																																																																																																																													1
ACAAT							1																																																																																																																																																																																																																											1
ACACC	1																																																																																																																																																																																																																																	1
ACAGC		1																																																																																																																																																																																																																																1
ACAGT		1																																																																																																																																																																																																																																1
ACATA	1																																																																																																																																																																																																																																	1
ACATC				1																																																																																																																																																																																																																														1
ACCCC	1																																																																																																																																																																																																																																	1
ACCGC	1																																																																																																																																																																																																																																	1
ACCTG	1																																																																																																																																																																																																																																	1
ACGAA	1																																																																																																																																																																																																																																	1
ACGCA	1																																																																																																																																																																																																																																	1
ACGCC	1																																																																																																																																																																																																																																	1
ACGTT	1																																																																																																																																																																																																																																	1
ACTGG			1																																																																																																																																																																																																																															1
ACTGT	1	2																																																																																																																																																																																																																																3
AGAAA	3																																																																																																																																																																																																																																	3
AGAAC				1																																																																																																																																																																																																																														1
AGAAG	1																																																																																																																																																																																																																																	1
AGAGC	2																																																																																																																																																																																																																																	2
AGCAA	4																																																																																																																																																																																																																																	4
AGCAG	3																																																																																																																																																																																																																																	3
AGCGA	3																																																																																																																																																																																																																																	3
AGCGC	2																																																																																																																																																																																																																																	2
ATAAA	3																																																																																																																																																																																																																																	3
ATAAC	1																																																																																																																																																																																																																																	1
ATAAG	1																																																																																																																																																																																																																																	1
ATAAT	2	1																																																																																																																																																																																																																																3
ATACA	1																																																																																																																																																																																																																																	1
ATATA	4																																																																																																																																																																																																																																	4
ATATC		1																																																																																																																																																																																																																																1
ATATT	2																																																																																																																																																																																																																																	2
ATCAT	1		1		1							1																																																																																																																																																																																																																						4
ATCCC	1																																																																																																																																																																																																																																	1
ATCGC	1																																																																																																																																																																																																																																	1
ATCTC				1																																																																																																																																																																																																																														1
ATGAA	1																																																																																																																																																																																																																																	1
ATGCG		1																																																																																																																																																																																																																																1
ATGCT						1																																																																																																																																																																																																																												1
ATGGC	1																																																																																																																																																																																																																																	1
ATTAT	2	1																																																																																																																																																																																																																																3
ATTGT		1																																																																																																																																																																																																																																1
ATTTA	2	1																																																																																																																																																																																																																																3
ATTTC		1	1																																																																																																																																																																																																																															2
ATTTT	17	5							1																																																																																																																																																																																																																									23
CAAAA	1																																																																																																																																																																																																																																	1
CAAAC	1																																																																																																																																																																																																																																	1
CAAAG	1																																																																																																																																																																																																																																	1
CAACA		1																																																																																																																																																																																																																																1
CAACG	1			1																																																																																																																																																																																																																														2
CACAT		1																																																																																																																																																																																																																																1
CACGT		1																																																																																																																																																																																																																																1
CAGAC	1																																																																																																																																																																																																																																	1
CAGCA	1	1		1																																																																																																																																																																																																																														3
CAGCC	1																																																																																																																																																																																																																																	1
CAGCG	1																																																																																																																																																																																																																																	1
CAGTA	2																																																																																																																																																																																																																																	2
CATAA	1																																																																																																																																																																																																																																	1
CATCA	1		1																																																																																																																																																																																																																															2
CATCG	1																																																																																																																																																																																																																																	1
CATGC	1																																																																																																																																																																																																																																	1
CATGT	2																																																																																																																																																																																																																																	2
CATTA		1																																																																																																																																																																																																																																1
CATTG	1																																																																																																																																																																																																																																	1
CCAAC	1																																																																																																																																																																																																																																	1
CCATT	1																																																																																																																																																																																																																																	1
CCCCT	1																																																																																																																																																																																																																																	1
CCGCT	1																																																																																																																																																																																																																																	1
CCTCA	1																																																																																																																																																																																																																																	1
CCTTC	1																																																																																																																																																																																																																																	1
CGAAA	2																																																																																																																																																																																																																																	2
CGAAC	1																																																																																																																																																																																																																																	1
CGAAG	4																																																																																																																																																																																																																																	4
CGAAT	1																																																																																																																																																																																																																																	1
CGCAC	1																																																																																																																																																																																																																																	1
CGCCC	1																																																																																																																																																																																																																																	1
CGCCT	1																																																																																																																																																																																																																																	1
CGCGA		1																																																																																																																																																																																																																																1
CGCGC	1																																																																																																																																																																																																																																	1
CGCTG	1																																																																																																																																																																																																																																	1
CGCTT	3																																																																																																																																																																																																																																	3
CGGTG	1																																																																																																																																																																																																																																	1
CGTAG	1																																																																																																																																																																																																																																	1
CGTTA	1																																																																																																																																																																																																																																	1
CGTTC	2																																																																																																																																																																																																																																	2
CGTTG	1																																																																																																																																																																																																																																	1
CTATG	1																																																																																																																																																																																																																																	1
CTCAC	1	1																																																																																																																																																																																																																																2
CTCCC	2																																																																																																																																																																																																																																	2
CTCCT	1																																																																																																																																																																																																																																	1
CTCTC		1																																																																																																																																																																																																																																1
CTGAA	1																																																																																																																																																																																																																																	1
CTGCG	1																																																																																																																																																																																																																																	1
CTGTG	1	1																																																																																																																																																																																																																																2
CTGTT	1																																																																																																																																																																																																																																	1
CTTCC	1																																																																																																																																																																																																																																	1
CTTCG	1																																																																																																																																																																																																																																	1
CTTTA		1																																																																																																																																																																																																																																1
CTTTC	3																																																																																																																																																																																																																																	3
CTTTG	3	1																																																																																																																																																																																																																																4
CTTTT	3	1		1																																																																																																																																																																																																																														5
GAAAA	7	2																																																																																																																																																																																																																																9
GAAAG	1																																																																																																																																																																																																																																	1
GAAAT	1																																																																																																																																																																																																																																	1
GAACC	1																																																																																																																																																																																																																																	1
GAAGC	2	1																																																																																																																																																																																																																																3
GAAGT	1	1		1																																																																																																																																																																																																																														3
GAGAA		1																																																																																																																																																																																																																																1
GAGCA	1																																																																																																																																																																																																																																	1
GAGGC			1																																																																																																																																																																																																																															1
GAGTG	1																																																																																																																																																																																																																																	1
GATGT	1																																																																																																																																																																																																																																	1
GATTC	1																																																																																																																																																																																																																																	1
GATTT		1																																																																																																																																																																																																																																1
GCAAA	2	1																																																																																																																																																																																																																																3
GCAAC		1	1																																																																																																																																																																																																																															2
GCAAT	2																																																																																																																																																																																																																																	2
GCACA	2																																																																																																																																																																																																																																	2
GCAGC	4																																																																																																																																																																																																																																	4
GCAGT	1																																																																																																																																																																																																																																	1
GCATC	1																																																																																																																																																																																																																																	1
GCCCT		1																																																																																																																																																																																																																																1
GCGAA	1																																																																																																																																																																																																																																	1
GCGAC	1																																																																																																																																																																																																																																	1
GCGAT	2																																																																																																																																																																																																																																	2
GCGCT	1																																																																																																																																																																																																																																	1
GCGGG	1																																																																																																																																																																																																																																	1
GCTAT	2	1																																																																																																																																																																																																																																3
GCTCT	1																																																																																																																																																																																																																																	1
GCTGA	1																																																																																																																																																																																																																																	1
GCTGC	1																																																																																																																																																																																																																																	1
GCTGT	1																																																																																																																																																																																																																																	1
GCTTC	2																																																																																																																																																																																																																																	2
GCTTT		2																																																																																																																																																																																																																																2
GGAGA	2																																																																																																																																																																																																																																	2
GGAGC	1																																																																																																																																																																																																																																	1
GGGAG	1																																																																																																																																																																																																																																	1
GGGGA	1																																																																																																																																																																																																																																	1
GGTAT	1																																																																																																																																																																																																																																	1
GGTGA	1																																																																																																																																																																																																																																	1
GGTGC	1																																																																																																																																																																																																																																	1
GTACT		2																																																																																																																																																																																																																																2
GTCTC	1																																																																																																																																																																																																																																	1
GTGCT		2																																																																																																																																																																																																																																2
GTGGT		1																																																																																																																																																																																																																																1
GTTAT	1																																																																																																																																																																																																																																	1
GTTGC	1		1																																																																																																																																																																																																																															2
GTTTC	2																																																																																																																																																																																																																																	2
GTTTT	3		1																																																																																																																																																																																																																															4
TAAAA	9	2	3	1	1																																																																																																																																																																																																																													16
TAAAT	2																																																																																																																																																																																																																																	2
TAACA	2																																																																																																																																																																																																																																	2
TAAGC	1																																																																																																																																																																																																																																	1
TAATA		2																																																																																																																																																																																																																																2
TAATG	2																																																																																																																																																																																																																																	2
TAATT	1																																																																																																																																																																																																																																	1
TACAA											1																																																																																																																																																																																																																							1
TACAT	1																																																																																																																																																																																																																																	1
TAGCA	2	1																																																																																																																																																																																																																																3
TAGCG	1																																																																																																																																																																																																																																	1
TAGCT	1																																																																																																																																																																																																																																	1
TAGTT	1																																																																																																																																																																																																																																	1
TATAA	1																																																																																																																																																																																																																																	1
TATAC		1																																																																																																																																																																																																																																1
TATAT	2																																																																																																																																																																																																																																	2
TATCA	1		1										1																																																																																																																																																																																																																					3
TATCC	1																																																																																																																																																																																																																																	1
TATGC		2	2																																																																																																																																																																																																																															4
TATGT	1																																																																																																																																																																																																																																	1
TATTT	8	1	2								1																																																																																																																																																																																																																							12
TCACA	1																																																																																																																																																																																																																																	1
TCACC	3																																																																																																																																																																																																																																	3
TCATA				1																																																																																																																																																																																																																														1
TCATG	1																																																																																																																																																																																																																																	1
TCCTT	1																																																																																																																																																																																																																																	1
TCGCT	1																																																																																																																																																																																																																																	1
TCGTT	1																																																																																																																																																																																																																																	1
TCTGC	1																																																																																																																																																																																																																																	1
TCTTC	1																																																																																																																																																																																																																																	1
TCTTT	1	1																																																																																																																																																																																																																																2
TGAAA	1																																																																																																																																																																																																																																	1
TGAAG	2																																																																																																																																																																																																																																	2
TGATA	1																																																																																																																																																																																																																																	1
TGATT	1																																																																																																																																																																																																																																	1
TGCAA	1																																																																																																																																																																																																																																	1
TGCCG	1																																																																																																																																																																																																																																	1
TGCGA	1	1																																																																																																																																																																																																																																2
TGCTA	3																																																																																																																																																																																																																																	3
TGCTC				1																																																																																																																																																																																																																														1
TGCTG	1		2																																																																																																																																																																																																																															3
TGCTT	2	1																																																																																																																																																																																																																																3
TGGTG	1																																																																																																																																																																																																																																	1
TGTAC	2																																																																																																																																																																																																																																	2
TGTAG	1																																																																																																																																																																																																																																	1
TGTGA		1																																																																																																																																																																																																																																1
TGTTA		1																																																																																																																																																																																																																																1
TGTTC	1																																																																																																																																																																																																																																	1
TGTTT	4	3	1																																																																																																																																																																																																																															8
TTAAA	1																																																																																																																																																																																																																																	1
TTAAT	3		1																																																																																																																																																																																																																															4
TTACA		1																																																																																																																																																																																																																																1
TTACT	1																																																																																																																																																																																																																																	1
TTATA	3	1																																																																																																																																																																																																																																4
TTATT	22	11	5	1																																																																																																																																																																																																																														39
TTCAC	2																																																																																																																																																																																																																																	2
TTCAT	1																																																																																																																																																																																																																																	1
TTCCC	1																																																																																																																																																																																																																																	1
TTCCG	1																																																																																																																																																																																																																																	1
TTCCT	1		1																																																																																																																																																																																																																															2
TTCGT	1																																																																																																																																																																																																																																	1
TTCTT	2	3	1																																																																																																																																																																																																																															6
TTGCA	1																																																																																																																																																																																																																																	1
TTGGC		1																																																																																																																																																																																																																																1
TTGGT		1																																																																																																																																																																																																																																1
TTGTT	2			1																																																																																																																																																																																																																														3
TTTAA	3				1																																																																																																																																																																																																																													4
TTTAC	1																																																																																																																																																																																																																																	1
TTTAT	13		1	1	1								1																																																																																																																																																																																																																					17
TTTCA	3																																																																																																																																																																																																																																	3
TTTCC	2																																																																																																																																																																																																																																	2
TTTCG	1	1			1																																																																																																																																																																																																																													3
TTTCT	4	1																																																																																																																																																																																																																																5
TTTGA	1	1																																																																																																																																																																																																																																2
TTTGC	2	2	2																																																																																																																																																																																																																															6
TTTGT	3	1																																																																																																																																																																																																																																4
TTTTA	32	14	4	2	1		1																																																																																																																																																																																																																											54
TTTTC	12	1	2																																																																																																																																																																																																																															15
TTTTG	4	2																																																																																																																																																																																																																																6
AAAAAG	4	3	2																																																																																																																																																																																																																															9
AAAAAT	8	1																																																																																																																																																																																																																																9
AAAAGA	6																																																																																																																																																																																																																																	6
AAAAGC	1		1																																																																																																																																																																																																																															2
AAAAGG	1	1																																																																																																																																																																																																																																2
AAAATA	4	3																																																																																																																																																																																																																																7
AAAATT	1																																																																																																																																																																																																																																	1
AAACAG				1																																																																																																																																																																																																																														1
AAACGT	1																																																																																																																																																																																																																																	1
AAAGAA	6																																																																																																																																																																																																																																	6
AAAGAG	1																																																																																																																																																																																																																																	1
AAAGGA	2	1																																																																																																																																																																																																																																3
AAAGGC	1	1																																																																																																																																																																																																																																2
AAAGGG	1	1																																																																																																																																																																																																																																2
AAATAA	2																																																																																																																																																																																																																																	2
AAATAG	1																																																																																																																																																																																																																																	1
AACAAT		1																																																																																																																																																																																																																																1
AACAGC	1	1	1																																																																																																																																																																																																																															3
AACCCT	2			1																																																																																																																																																																																																																														3
AACGAT	1																																																																																																																																																																																																																																	1
AACGCA	1																																																																																																																																																																																																																																	1
AACGCG	1																																																																																																																																																																																																																																	1
AAGAAA	4																																																																																																																																																																																																																																	4
AAGACC		1																																																																																																																																																																																																																																1
AAGAGC	1																																																																																																																																																																																																																																	1
AAGCAG	1																																																																																																																																																																																																																																	1
AAGCGA			1																																																																																																																																																																																																																															1
AAGGAG	1	2																																																																																																																																																																																																																																3
AAGGAT	1																																																																																																																																																																																																																																	1
AAGTGA		1																																																																																																																																																																																																																																1
AATAAA	2																																																																																																																																																																																																																																	2
AATAAC	1																																																																																																																																																																																																																																	1
AATAGT	1																																																																																																																																																																																																																																	1
AATATT	1																																																																																																																																																																																																																																	1
AATCGC	1	1																																																																																																																																																																																																																																2
AATGAA	1																																																																																																																																																																																																																																	1
AATGAG			1																																																																																																																																																																																																																															1
AATGTT	1																																																																																																																																																																																																																																	1
AATTTT	2																																																																																																																																																																																																																																	2
ACAAAA	1		1																																																																																																																																																																																																																															2
ACAATC			1																																																																																																																																																																																																																															1
ACACAA	1																																																																																																																																																																																																																																	1
ACATAC	1																																																																																																																																																																																																																																	1
ACATAT	2	1	1																																																																																																																																																																																																																															4
ACATGT	2																																																																																																																																																																																																																																	2
ACATTT	1		1																																																																																																																																																																																																																															2
ACCGCC		1																																																																																																																																																																																																																																1
ACGAAA		1																																																																																																																																																																																																																																1
ACGATG	1																																																																																																																																																																																																																																	1
ACGCAC	1																																																																																																																																																																																																																																	1
ACGCGT	1																																																																																																																																																																																																																																	1
ACGTAA	1																																																																																																																																																																																																																																	1
ACGTAC	1																																																																																																																																																																																																																																	1
ACGTAT	1																																																																																																																																																																																																																																	1
ACTGCT		1																																																																																																																																																																																																																																1
ACTTTC	1																																																																																																																																																																																																																																	1
AGAAGC	2																																																																																																																																																																																																																																	2
AGAGGG	1																																																																																																																																																																																																																																	1
AGAGTG				1																																																																																																																																																																																																																														1
AGATGC		1																																																																																																																																																																																																																																1
AGCAGG	1																																																																																																																																																																																																																																	1
AGCGGA	2																																																																																																																																																																																																																																	2
AGCGGC	4	1																																																																																																																																																																																																																																5
AGCGGG	1																																																																																																																																																																																																																																	1
AGCGGT	1																																																																																																																																																																																																																																	1
AGGCGA	1																																																																																																																																																																																																																																	1
AGGGGA	1																																																																																																																																																																																																																																	1
AGGGTT	1																																																																																																																																																																																																																																	1
AGGTGC	1	1																																																																																																																																																																																																																																2
AGTAAC	1																																																																																																																																																																																																																																	1
AGTAAT		1																																																																																																																																																																																																																																1
ATAAAC	1																																																																																																																																																																																																																																	1
ATAACA	1																																																																																																																																																																																																																																	1
ATACAT	3	1																																																																																																																																																																																																																																4
ATACGT	2																																																																																																																																																																																																																																	2
ATAGTA	1																																																																																																																																																																																																																																	1
ATAGTT	1																																																																																																																																																																																																																																	1
ATATAC	1																																																																																																																																																																																																																																	1
ATATGA	1																																																																																																																																																																																																																																	1
ATATTA	1																																																																																																																																																																																																																																	1
ATCAGC	1																																																																																																																																																																																																																																	1
ATCGCA		2																																																																																																																																																																																																																																2
ATCTTT			1																																																																																																																																																																																																																															1
ATGAAT	1																																																																																																																																																																																																																																	1
ATGCAT	1																																																																																																																																																																																																																																	1
ATGCGA	1																																																																																																																																																																																																																																	1
ATGGGA		1																																																																																																																																																																																																																																1
ATGTAT	2	1																																																																																																																																																																																																																																3
ATGTGT	1	1																																																																																																																																																																																																																																2
ATTAAT	1																																																																																																																																																																																																																																	1
ATTAGC	1																																																																																																																																																																																																																																	1
ATTATA		1																																																																																																																																																																																																																																1
ATTGCC			1																																																																																																																																																																																																																															1
ATTGCT		1																																																																																																																																																																																																																																1
ATTGTG	1																																																																																																																																																																																																																																	1
ATTTAT	1																																																																																																																																																																																																																																	1
ATTTGT	1																																																																																																																																																																																																																																	1
ATTTTA		1																																																																																																																																																																																																																																1
ATTTTC	1																																																																																																																																																																																																																																	1
CAAACG	1	1		1																																																																																																																																																																																																																														3
CAACAG	1																																																																																																																																																																																																																																	1
CAACCG	1																																																																																																																																																																																																																																	1
CAATCG		1																																																																																																																																																																																																																																1
CAATGG	1																																																																																																																																																																																																																																	1
CAATTA	1																																																																																																																																																																																																																																	1
CACAAT		1																																																																																																																																																																																																																																1
CACATA	1																																																																																																																																																																																																																																	1
CACCGC	1																																																																																																																																																																																																																																	1
CACGCA			1																																																																																																																																																																																																																															1
CACGTA			1																																																																																																																																																																																																																															1
CACTAC							1																																																																																																																																																																																																																											1
CACTCG	1																																																																																																																																																																																																																																	1
CACTTT	1																																																																																																																																																																																																																																	1
CAGAAG	2																																																																																																																																																																																																																																	2
CAGCAT	1																																																																																																																																																																																																																																	1
CAGCGG		1																																																																																																																																																																																																																																1
CAGCTA		1																																																																																																																																																																																																																																1
CAGCTT		1																																																																																																																																																																																																																																1
CAGTAG	1																																																																																																																																																																																																																																	1
CAGTTA		1																																																																																																																																																																																																																																1
CATACA	1		1																																																																																																																																																																																																																															2
CATAGT	1																																																																																																																																																																																																																																	1
CATATA	3																																																																																																																																																																																																																																	3
CATCGC	2																																																																																																																																																																																																																																	2
CATCGT	1																																																																																																																																																																																																																																	1
CATGCA	2																																																																																																																																																																																																																																	2
CATGTA	1																																																																																																																																																																																																																																	1
CATGTT	1																																																																																																																																																																																																																																	1
CATTAC			1																																																																																																																																																																																																																															1
CATTGA	1																																																																																																																																																																																																																																	1
CCACAA	1																																																																																																																																																																																																																																	1
CCACAT	1																																																																																																																																																																																																																																	1
CCACCG	2																																																																																																																																																																																																																																	2
CCACTA	1																																																																																																																																																																																																																																	1
CCATCC	1																																																																																																																																																																																																																																	1
CCATCG	1																																																																																																																																																																																																																																	1
CCCTCT		1																																																																																																																																																																																																																																1
CCCTTT	1		1																																																																																																																																																																																																																															2
CCGCAG	1																																																																																																																																																																																																																																	1
CCGCGT	1																																																																																																																																																																																																																																	1
CCGCTA	2	1																																																																																																																																																																																																																																3
CCGCTG	3																																																																																																																																																																																																																																	3
CCGCTT	3																																																																																																																																																																																																																																	3
CCGTTG			1																																																																																																																																																																																																																															1
CCTCCA	3																																																																																																																																																																																																																																	3
CCTCCC	1																																																																																																																																																																																																																																	1
CCTCTC	1																																																																																																																																																																																																																																	1
CCTGCT	1																																																																																																																																																																																																																																	1
CCTTCA	1	1																																																																																																																																																																																																																																2
CCTTCC	1																																																																																																																																																																																																																																	1
CCTTCG	1																																																																																																																																																																																																																																	1
CCTTCT	1	1																																																																																																																																																																																																																																2
CGAAAG				1																																																																																																																																																																																																																														1
CGAATG		1																																																																																																																																																																																																																																1
CGACAT	1																																																																																																																																																																																																																																	1
CGACTC		1																																																																																																																																																																																																																																1
CGCACA	2																																																																																																																																																																																																																																	2
CGCAGA	1																																																																																																																																																																																																																																	1
CGCATA	1																																																																																																																																																																																																																																	1
CGCCAT	1																																																																																																																																																																																																																																	1
CGCCTT	1																																																																																																																																																																																																																																	1
CGCGTT	1																																																																																																																																																																																																																																	1
CGCTAA	1																																																																																																																																																																																																																																	1
CGCTAC		1																																																																																																																																																																																																																																1
CGCTAT			1																																																																																																																																																																																																																															1
CGCTGA	1																																																																																																																																																																																																																																	1
CGCTGC	1																																																																																																																																																																																																																																	1
CGCTTA				1																																																																																																																																																																																																																														1
CGCTTC	1																																																																																																																																																																																																																																	1
CGGAAG		1																																																																																																																																																																																																																																1
CGGCAA	1																																																																																																																																																																																																																																	1
CGGCTG	1																																																																																																																																																																																																																																	1
CGGCTT			1																																																																																																																																																																																																																															1
CGGGTA	1																																																																																																																																																																																																																																	1
CGGTCT	1																																																																																																																																																																																																																																	1
CGTATA	1																																																																																																																																																																																																																																	1
CGTCCT	1																																																																																																																																																																																																																																	1
CGTGTG	1																																																																																																																																																																																																																																	1
CGTTAA	1																																																																																																																																																																																																																																	1
CGTTCA	1																																																																																																																																																																																																																																	1
CGTTGA	1																																																																																																																																																																																																																																	1
CGTTTT		1																																																																																																																																																																																																																																1
CTAACC	1																																																																																																																																																																																																																																	1
CTCTAC	1																																																																																																																																																																																																																																	1
CTCTCC		1																																																																																																																																																																																																																																1
CTCTTC	1																																																																																																																																																																																																																																	1
CTCTTT		1																																																																																																																																																																																																																																1
CTGAAG	1																																																																																																																																																																																																																																	1
CTGCAA		1																																																																																																																																																																																																																																1
CTGCCC	1																																																																																																																																																																																																																																	1
CTGCGA	1																																																																																																																																																																																																																																	1
CTGCGC	1																																																																																																																																																																																																																																	1
CTGTGT	1																																																																																																																																																																																																																																	1
CTGTTT	1																																																																																																																																																																																																																																	1
CTTCCG	1																																																																																																																																																																																																																																	1
CTTCCT	3																																																																																																																																																																																																																																	3
CTTCGT	1																																																																																																																																																																																																																																	1
CTTCTC	1	1																																																																																																																																																																																																																																2
CTTCTG			1																																																																																																																																																																																																																															1
CTTGCA		1																																																																																																																																																																																																																																1
CTTTAC	1																																																																																																																																																																																																																																	1
CTTTCC	1	1																																																																																																																																																																																																																																2
CTTTCG	1																																																																																																																																																																																																																																	1
CTTTTC	1																																																																																																																																																																																																																																	1
CTTTTT	3	1																																																																																																																																																																																																																																4
GAAAAA	3	1																																																																																																																																																																																																																																4
GAAAAG	2																																																																																																																																																																																																																																	2
GAAAAT				1																																																																																																																																																																																																																														1
GAAAGC			1																																																																																																																																																																																																																															1
GAAATT	1																																																																																																																																																																																																																																	1
GAAGAC	1																																																																																																																																																																																																																																	1
GAAGAG	1																																																																																																																																																																																																																																	1
GAAGGC	1																																																																																																																																																																																																																																	1
GAATGC	1																																																																																																																																																																																																																																	1
GACGCT	1																																																																																																																																																																																																																																	1
GACTCG	1																																																																																																																																																																																																																																	1
GAGAAA	1																																																																																																																																																																																																																																	1
GAGAAT	1																																																																																																																																																																																																																																	1
GAGGAA	1																																																																																																																																																																																																																																	1
GAGGAT	1																																																																																																																																																																																																																																	1
GAGGCG	1																																																																																																																																																																																																																																	1
GAGGTG	1																																																																																																																																																																																																																																	1
GATAAC		1																																																																																																																																																																																																																																1
GATGAA	1																																																																																																																																																																																																																																	1
GATGAG			1																																																																																																																																																																																																																															1
GATGCA	1																																																																																																																																																																																																																																	1
GCAAAA	1																																																																																																																																																																																																																																	1
GCAAAG			1																																																																																																																																																																																																																															1
GCAACA	1																																																																																																																																																																																																																																	1
GCAACC	1																																																																																																																																																																																																																																	1
GCAATA	1																																																																																																																																																																																																																																	1
GCAATG	1																																																																																																																																																																																																																																	1
GCACAT	2																																																																																																																																																																																																																																	2
GCACCT	1																																																																																																																																																																																																																																	1
GCAGAG		1																																																																																																																																																																																																																																1
GCAGAT	1																																																																																																																																																																																																																																	1
GCAGCG		1																																																																																																																																																																																																																																1
GCAGTG	1																																																																																																																																																																																																																																	1
GCAGTT		1																																																																																																																																																																																																																																1
GCATAC		1																																																																																																																																																																																																																																1
GCATAT	1																																																																																																																																																																																																																																	1
GCATCA	1																																																																																																																																																																																																																																	1
GCATGT	1																																																																																																																																																																																																																																	1
GCATTT	1	2																																																																																																																																																																																																																																3
GCCAAA		1																																																																																																																																																																																																																																1
GCCACC		1																																																																																																																																																																																																																																1
GCCACT	1																																																																																																																																																																																																																																	1
GCCCGT	1																																																																																																																																																																																																																																	1
GCCTGT	1																																																																																																																																																																																																																																	1
GCGAAG	2																																																																																																																																																																																																																																	2
GCGATA	1																																																																																																																																																																																																																																	1
GCGATC	1																																																																																																																																																																																																																																	1
GCGATT	1																																																																																																																																																																																																																																	1
GCGCGG	1																																																																																																																																																																																																																																	1
GCGGAA	2																																																																																																																																																																																																																																	2
GCGGAT	1																																																																																																																																																																																																																																	1
GCGGGA	1																																																																																																																																																																																																																																	1
GCGGTC	2																																																																																																																																																																																																																																	2
GCGGTG		1																																																																																																																																																																																																																																1
GCGTGT	1																																																																																																																																																																																																																																	1
GCGTTA	1																																																																																																																																																																																																																																	1
GCGTTC	1																																																																																																																																																																																																																																	1
GCGTTT	1		1																																																																																																																																																																																																																															2
GCTAAC		1																																																																																																																																																																																																																																1
GCTGCC	1																																																																																																																																																																																																																																	1
GCTGCG	1																																																																																																																																																																																																																																	1
GCTGTA	1																																																																																																																																																																																																																																	1
GCTTAC	1																																																																																																																																																																																																																																	1
GCTTCC	1	1																																																																																																																																																																																																																																2
GCTTGA	1																																																																																																																																																																																																																																	1
GGAAAA	1																																																																																																																																																																																																																																	1
GGAAGA	1																																																																																																																																																																																																																																	1
GGAAGC	2	1																																																																																																																																																																																																																																3
GGAGAA		1																																																																																																																																																																																																																																1
GGAGAG		1																																																																																																																																																																																																																																1
GGAGAT				1																																																																																																																																																																																																																														1
GGAGGC	1																																																																																																																																																																																																																																	1
GGAGTC	1																																																																																																																																																																																																																																	1
GGAGTG	1																																																																																																																																																																																																																																	1
GGCAGA		1																																																																																																																																																																																																																																1
GGCAGC	1																																																																																																																																																																																																																																	1
GGCATC	2																																																																																																																																																																																																																																	2
GGCGAC	1																																																																																																																																																																																																																																	1
GGCGGA	1																																																																																																																																																																																																																																	1
GGGAAA	1	1																																																																																																																																																																																																																																2
GGGGAA	1																																																																																																																																																																																																																																	1
GGGGCA	1																																																																																																																																																																																																																																	1
GGTAAC	1																																																																																																																																																																																																																																	1
GGTAGC	4																																																																																																																																																																																																																																	4
GGTGAA	1																																																																																																																																																																																																																																	1
GGTGAC	1																																																																																																																																																																																																																																	1
GGTGAG	1																																																																																																																																																																																																																																	1
GGTGCA	1																																																																																																																																																																																																																																	1
GGTGGC	1																																																																																																																																																																																																																																	1
GGTTGC	1																																																																																																																																																																																																																																	1
GTAAAA	1																																																																																																																																																																																																																																	1
GTACAC	1																																																																																																																																																																																																																																	1
GTACAT	1																																																																																																																																																																																																																																	1
GTAGCG	1																																																																																																																																																																																																																																	1
GTATAC	2																																																																																																																																																																																																																																	2
GTATAT	2																																																																																																																																																																																																																																	2
GTATGC	1																																																																																																																																																																																																																																	1
GTCATC	1																																																																																																																																																																																																																																	1
GTCGTT	1																																																																																																																																																																																																																																	1
GTCTCT	1																																																																																																																																																																																																																																	1
GTCTTC	1																																																																																																																																																																																																																																	1
GTGAGT	1																																																																																																																																																																																																																																	1
GTGATG	1																																																																																																																																																																																																																																	1
GTGCCC	1																																																																																																																																																																																																																																	1
GTGCCT	1	1																																																																																																																																																																																																																																2
GTGCGT	1																																																																																																																																																																																																																																	1
GTGGCA	1																																																																																																																																																																																																																																	1
GTGGTA	1																																																																																																																																																																																																																																	1
GTGTTC	1																																																																																																																																																																																																																																	1
GTTAAA	1																																																																																																																																																																																																																																	1
GTTACC		1																																																																																																																																																																																																																																1
GTTAGG	1																																																																																																																																																																																																																																	1
GTTCAC		1	1																																																																																																																																																																																																																															2
GTTGAA		1																																																																																																																																																																																																																																1
GTTGCG	1																																																																																																																																																																																																																																	1
GTTGCT	2																																																																																																																																																																																																																																	2
GTTGTG	1																																																																																																																																																																																																																																	1
GTTTGC			1																																																																																																																																																																																																																															1
GTTTGT	1	1																																																																																																																																																																																																																																2
TAAAAA		1																																																																																																																																																																																																																																1
TAAAAT	1																																																																																																																																																																																																																																	1
TAAACG	1		1																																																																																																																																																																																																																															2
TAAAGA	1																																																																																																																																																																																																																																	1
TAAATA	1																																																																																																																																																																																																																																	1
TAACAA	1																																																																																																																																																																																																																																	1
TAACAG	1																																																																																																																																																																																																																																	1
TAACCC	1																																																																																																																																																																																																																																	1
TACATA	3	1																																																																																																																																																																																																																																4
TACATG	1																																																																																																																																																																																																																																	1
TACATT	1																																																																																																																																																																																																																																	1
TACCAC							1																																																																																																																																																																																																																											1
TACCAT	1																																																																																																																																																																																																																																	1
TAGCGA	1																																																																																																																																																																																																																																	1
TAGCGG	1																																																																																																																																																																																																																																	1
TATACA	2																																																																																																																																																																																																																																	2
TATACG		1																																																																																																																																																																																																																																1
TATATG	5																																																																																																																																																																																																																																	5
TATATT	1																																																																																																																																																																																																																																	1
TATGCT	1																																																																																																																																																																																																																																	1
TATTAC	1																																																																																																																																																																																																																																	1
TATTGC	1																																																																																																																																																																																																																																	1
TATTTA	1		1																																																																																																																																																																																																																															2
TATTTC	1																																																																																																																																																																																																																																	1
TATTTG	1																																																																																																																																																																																																																																	1
TATTTT	2																																																																																																																																																																																																																																	2
TCACCA	1																																																																																																																																																																																																																																	1
TCACCT	1																																																																																																																																																																																																																																	1
TCATCT			1																																																																																																																																																																																																																															1
TCCCTC	1																																																																																																																																																																																																																																	1
TCCTCT	4																																																																																																																																																																																																																																	4
TCCTTA	1																																																																																																																																																																																																																																	1
TCCTTT	2																																																																																																																																																																																																																																	2
TCGACT		1																																																																																																																																																																																																																																1
TCGCAA		1																																																																																																																																																																																																																																1
TCGCCA	1																																																																																																																																																																																																																																	1
TCGTCC	1																																																																																																																																																																																																																																	1
TCGTTA		1																																																																																																																																																																																																																																1
TCTCCC	1																																																																																																																																																																																																																																	1
TCTCCT		1																																																																																																																																																																																																																																1
TCTCTT	1	2																																																																																																																																																																																																																																3
TCTGCC	1																																																																																																																																																																																																																																	1
TCTGCT		1																																																																																																																																																																																																																																1
TCTTCA	2			1																																																																																																																																																																																																																														3
TCTTCC	6	1	1																																																																																																																																																																																																																															8
TCTTTC	1																																																																																																																																																																																																																																	1
TCTTTT	4	1																																																																																																																																																																																																																																5
TGAAGC	1																																																																																																																																																																																																																																	1
TGAAGT	1																																																																																																																																																																																																																																	1
TGACCT		1																																																																																																																																																																																																																																1
TGACGA	1																																																																																																																																																																																																																																	1
TGCACA	1																																																																																																																																																																																																																																	1
TGCAGA		1																																																																																																																																																																																																																																1
TGCATA	1																																																																																																																																																																																																																																	1
TGCATT	1																																																																																																																																																																																																																																	1
TGCCAC	1																																																																																																																																																																																																																																	1
TGCCCC		1																																																																																																																																																																																																																																1
TGCCTG	1																																																																																																																																																																																																																																	1
TGCGCA	2																																																																																																																																																																																																																																	2
TGCGTA	1																																																																																																																																																																																																																																	1
TGCTAC		1																																																																																																																																																																																																																																1
TGCTAT			1																																																																																																																																																																																																																															1
TGCTGT		1		2																																																																																																																																																																																																																														3
TGGCAA	1																																																																																																																																																																																																																																	1
TGGCGA		1																																																																																																																																																																																																																																1
TGGCGT	1																																																																																																																																																																																																																																	1
TGGTCG		1																																																																																																																																																																																																																																1
TGTATA	3																																																																																																																																																																																																																																	3
TGTGCG	1																																																																																																																																																																																																																																	1
TGTGCT		1																																																																																																																																																																																																																																1
TGTTCA	1	1																																																																																																																																																																																																																																2
TGTTGC	1																																																																																																																																																																																																																																	1
TGTTTT		1																																																																																																																																																																																																																																1
TTAATA		1																																																																																																																																																																																																																																1
TTACAA		1																																																																																																																																																																																																																																1
TTACCG	1																																																																																																																																																																																																																																	1
TTACGT	1																																																																																																																																																																																																																																	1
TTACTA	1																																																																																																																																																																																																																																	1
TTAGGG	2																																																																																																																																																																																																																																	2
TTATCC	1																																																																																																																																																																																																																																	1
TTATCG	1																																																																																																																																																																																																																																	1
TTATTT	2																																																																																																																																																																																																																																	2
TTCAAA	1																																																																																																																																																																																																																																	1
TTCATA			1																																																																																																																																																																																																																															1
TTCCTC	1																																																																																																																																																																																																																																	1
TTCGCC	1																																																																																																																																																																																																																																	1
TTCGTA	1																																																																																																																																																																																																																																	1
TTCTCC	1																																																																																																																																																																																																																																	1
TTCTTT	2	1	2																																																																																																																																																																																																																															5
TTGCAC			2																																																																																																																																																																																																																															2
TTGCCG	1																																																																																																																																																																																																																																	1
TTGCGT	1																																																																																																																																																																																																																																	1
TTGTTC		1																																																																																																																																																																																																																																1
TTTAAT	1																																																																																																																																																																																																																																	1
TTTACA	2																																																																																																																																																																																																																																	2
TTTACG			1																																																																																																																																																																																																																															1
TTTATA	1																																																																																																																																																																																																																																	1
TTTATT	2	1																																																																																																																																																																																																																																3
TTTCAT	1																																																																																																																																																																																																																																	1
TTTCCT	1																																																																																																																																																																																																																																	1
TTTCTA	1																																																																																																																																																																																																																																	1
TTTCTC	2																																																																																																																																																																																																																																	2
TTTCTT	4																																																																																																																																																																																																																																	4
TTTGCA					1																																																																																																																																																																																																																													1
TTTTAC	1																																																																																																																																																																																																																																	1
TTTTAT	3	1																																																																																																																																																																																																																																4
TTTTCA	2																																																																																																																																																																																																																																	2
TTTTCC	3	2																																																																																																																																																																																																																																5
TTTTCT	3	3																																																																																																																																																																																																																																6
TTTTGC	2																																																																																																																																																																																																																																	2
TTTTTA	3	1																																																																																																																																																																																																																																4
TTTTTC	5	7		1																																																																																																																																																																																																																														13
TTTTTG	2																																																																																																																																																																																																																																	2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	101	102	103	104	105	106	107	108	109	110	111	112	113	114	115	116	117	118	119	120	121	122	123	124	125	126	127	128	129	130	131	132	133	134	135	136	137	138	139	140	141	142	143	144	145	146	147	148	149	150	151	152	153	154	155	156	157	158	159	160	161	162	163	164	165	166	167	168	169	170	171	172	173	174	175	176	177	178	179	180	181	182	183	184	185	186	187	188	189	190	191	192	193	194	195	196	197	198	199	200	201	202	203	204	205	206	207	208	209	210	211	212	213	214	215	216	217	218	219	220	221	222	223	224	225	226	227	total
A/T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	798	684	567	486	406	338	260	217	116	107	76	53	35	37	25	25	21	12	12	7	16	4	4	4	4	6	2	1	2	2	10		1	2			1		1						1											1										1											1						1																																				1							1	1																																																																																	1	4351
C/G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5		3		2	2	1	1		3	1			1							1										1																																																																																																																																																																																		21
AC/GT	-	-	-	100	36	20	10	6	3											1																																																																																																																																																																																																														176
AG/CT	-	-	-	37	7	1	3	1		1	1	2						1	1																																																																																																																																																																																																															55
AT/AT	-	-	-	270	101	71	39	30	26	27	21	5	13	12	3	7	2	1	1	3	2	1		1			1																																																																																																																																																																																																							637
CG/CG	-	-	-	7	1																																																																																																																																																																																																																													8
AAC/GTT	-	-	5	2	1	1		2																																																																																																																																																																																																																										11
AAG/CTT	-	-	69	25	12	13	5	1	1	1	1	2	1																																																																																																																																																																																																																					131
AAT/ATT	-	-	26	10	7	1	4		1	1	1									1							1																																																																																																																																																																																																							53
ACC/GGT	-	-	19	5	1	1																																																																																																																																																																																																																												26
ACG/CGT	-	-	9	2				1																																																																																																																																																																																																																										12
ACT/AGT	-	-	6	2		2		1																																																																																																																																																																																																																										11
AGC/CTG	-	-	13	10	10	6																																																																																																																																																																																																																												39
AGG/CCT	-	-	42	26	11	6	3	1		1																																																																																																																																																																																																																								90
ATC/ATG	-	-	19	8	3	3	4		1								1																																																																																																																																																																																																																	39
CCG/CGG	-	-	7	2																																																																																																																																																																																																																														9
AAAC/GTTT	-	20	9	3		1	2	1			1																																																																																																																																																																																																																							37
AAAG/CTTT	-	14	1	4	3					1															1																																																																																																																																																																																																									24
AAAT/ATTT	-	76	29	13	11	7	2		2																																																																																																																																																																																																																									140
AACC/GGTT	-				1																																																																																																																																																																																																																													1
AACG/CGTT	-	10	8	9	2																																																																																																																																																																																																																													29
AACT/AGTT	-	1																																																																																																																																																																																																																																1
AAGC/CTTG	-	4	1	1																																																																																																																																																																																																																														6
AAGG/CCTT	-	3	1	2	4	1		1																																																																																																																																																																																																																										12
AAGT/ACTT	-		1																																																																																																																																																																																																																															1
AATC/ATTG	-	3		1					1																																																																																																																																																																																																																									5
AATG/ATTC	-	3	1	3		2																			1																			1																																																																																																																																																																																						11
AATT/AATT	-	10	7		2	1																																																																																																																																																																																																																												20
ACAG/CTGT	-	1				1																																																																																																																																																																																																																												2
ACAT/ATGT	-	35	16	3	5	3	3				1																																							1																																																																																																																																																																																67
ACCG/CGGT	-		1			1		1																																																																																																																																																																																																																										3
ACCT/AGGT	-								1																																																																																																																																																																																																																									1
ACGC/CGTG	-	5	1	1																																																																																																																																																																																																																														7
ACGG/CCGT	-	2	2																																																																																																																																																																																																																															4
ACGT/ACGT	-	13	3																																																																																																																																																																																																																															16
ACTC/AGTG	-	1		1																																																																																																																																																																																																																														2
ACTG/AGTC	-		1					1		1																																																																																																																																																																																																																								3
AGAT/ATCT	-	3	1																																																																																																																																																																																																																															4
AGCC/CTGG	-	1																																																																																																																																																																																																																																1
AGCG/CGCT	-	1		1																																																																																																																																																																																																																														2
AGCT/AGCT	-	10	1																																																																																																																																																																																																																															11
AGGC/CCTG	-	2	1																																																																																																																																																																																																																															3
AGGG/CCCT	-	1																																																																																																																																																																																																																																1
ATCC/ATGG	-	6	3		1																																																																																																																																																																																																																													10
ATCG/ATCG	-		1																																																																																																																																																																																																																															1
ATGC/ATGC	-	2																																																																																																																																																																																																																																2
AAAAC/GTTTT	29	10	2	1	1																																																																																																																																																																																																																													43
AAAAG/CTTTT	52	15	4	2																																																																																																																																																																																																																														73
AAAAT/ATTTT	185	54	24	10	3		1		1		2		1			1																																																																																																																																																																																																																		282
AAACC/GGTTT	1	1		1																																																																																																																																																																																																																														3
AAACG/CGTTT	8	2	1		1																																																																																																																																																																																																																													12
AAACT/AGTTT	1																																																																																																																																																																																																																																	1
AAAGC/CTTTG	23	12	3																																																																																																																																																																																																																															38
AAAGG/CCTTT	11		2																																																																																																																																																																																																																															13
AAAGT/ACTTT	3	1																																																																																																																																																																																																																																4
AAATC/ATTTG	2	2																																																																																																																																																																																																																																4
AAATG/ATTTC	9	1	1																																																																																																																																																																																																																															11
AAATT/AATTT	15	3	2		1																																																																																																																																																																																																																													21
AACAC/GTGTT	1	1			1																																																																																																																																																																																																																													3
AACAG/CTGTT	4			1																																																																																																																																																																																																																														5
AACAT/ATGTT	7	1																																																																																																																																																																																																																																8
AACCC/GGGTT	1																																																																																																																																																																																																																																	1
AACCG/CGGTT	2																																																																																																																																																																																																																																	2
AACGC/CGTTG	4	1	2	1																																																																																																																																																																																																																														8
AACGG/CCGTT	4																																																																																																																																																																																																																																	4
AACGT/ACGTT	2																																																																																																																																																																																																																																	2
AACTG/AGTTC	1																																																																																																																																																																																																																																	1
AAGAG/CTCTT	3	2																																																																																																																																																																																																																																5
AAGAT/ATCTT	1																																																																																																																																																																																																																																	1
AAGCC/CTTGG		1																																																																																																																																																																																																																																1
AAGCG/CGCTT	18	1																																																																																																																																																																																																																																19
AAGCT/AGCTT	2																																																																																																																																																																																																																																	2
AAGGG/CCCTT	3																																																																																																																																																																																																																																	3
AAGTG/ACTTC	5	1		1																																																																																																																																																																																																																														7
AATAC/ATTGT	1	2					1				1																																																																																																																																																																																																																							5
AATAT/ATATT	18	5																																																																																																																																																																																																																																23
AATCG/ATTCG	2																																																																																																																																																																																																																																	2
AATGC/ATTGC	7																																																																																																																																																																																																																																	7
AATGG/ATTCC	1																																																																																																																																																																																																																																	1
AATGT/ACATT	3	3																																																																																																																																																																																																																																6
ACACC/GGTGT	2	1																																																																																																																																																																																																																																3
ACACT/AGTGT	1																																																																																																																																																																																																																																	1
ACAGC/CTGTG	6	5	2	1																																																																																																																																																																																																																														14
ACAGT/ACTGT	5	5																																																																																																																																																																																																																																10
ACATC/ATGTG	3	2	1	1																																																																																																																																																																																																																														7
ACATG/ATGTC	3																																																																																																																																																																																																																																	3
ACCAG/CTGGT	1																																																																																																																																																																																																																																	1
ACCAT/ATGGT	1																																																																																																																																																																																																																																	1
ACCCC/GGGGT	1																																																																																																																																																																																																																																	1
ACCGC/CGGTG	4																																																																																																																																																																																																																																	4
ACCTC/AGGTG	6	1																																																																																																																																																																																																																																7
ACCTG/AGGTC	1																																																																																																																																																																																																																																	1
ACGAG/CGTCT	1																																																																																																																																																																																																																																	1
ACGCC/CGTGG	1																																																																																																																																																																																																																																	1
ACGCG/CGCGT	1	1																																																																																																																																																																																																																																2
ACGCT/AGCGT	2																																																																																																																																																																																																																																	2
ACGGC/CCGTG	1																																																																																																																																																																																																																																	1
ACGTC/ACGTG		1																																																																																																																																																																																																																																1
ACTAT/AGTAT		1																																																																																																																																																																																																																																1
ACTCC/AGTGG	1																																																																																																																																																																																																																																	1
ACTGC/AGTGC	1																																																																																																																																																																																																																																	1
ACTGG/AGTCC			1																																																																																																																																																																																																																															1
AGAGC/CTCTG	8			1																																																																																																																																																																																																																														9
AGAGG/CCTCT	3	1																																																																																																																																																																																																																																4
AGATG/ATCTC				1																																																																																																																																																																																																																														1
AGCAT/ATGCT	8	4	2			1																																																																																																																																																																																																																												15
AGCCC/CTGGG	1																																																																																																																																																																																																																																	1
AGCGC/CGCTG	11																																																																																																																																																																																																																																	11
AGCGG/CCGCT	2																																																																																																																																																																																																																																	2
AGCTC/AGCTG	1																																																																																																																																																																																																																																	1
AGGAT/ATCCT	1																																																																																																																																																																																																																																	1
AGGCG/CCTCG	1		1																																																																																																																																																																																																																															2
AGGGC/CCCTG		1																																																																																																																																																																																																																																1
AGGGG/CCCCT	5																																																																																																																																																																																																																																	5
ATATC/ATATG	3	1	2	1	1							1	1																																																																																																																																																																																																																					10
ATCCC/ATGGG	1																																																																																																																																																																																																																																	1
ATCGC/ATGCG	6	2																																																																																																																																																																																																																																8
ATGCC/ATGGC	2																																																																																																																																																																																																																																	2
CCCCG/CGGGG	2																																																																																																																																																																																																																																	2
CCGCG/CGCGG	1																																																																																																																																																																																																																																	1
AAAAAC/GTTTTT	3	1	1																																																																																																																																																																																																																															5
AAAAAG/CTTTTT	44	17	4	1																																																																																																																																																																																																																														66
AAAAAT/ATTTTT	28	8																																																																																																																																																																																																																																36
AAAACG/CGTTTT		2																																																																																																																																																																																																																																2
AAAAGC/CTTTTG	4		1																																																																																																																																																																																																																															5
AAAAGG/CCTTTT	13	4																																																																																																																																																																																																																																17
AAAAGT/ACTTTT	2																																																																																																																																																																																																																																	2
AAAATG/ATTTTC	5			1																																																																																																																																																																																																																														6
AAAATT/AATTTT	5	1																																																																																																																																																																																																																																6
AAACAC/GTGTTT	2	1																																																																																																																																																																																																																																3
AAACAG/CTGTTT	1			1																																																																																																																																																																																																																														2
AAACAT/ATGTTT	1																																																																																																																																																																																																																																	1
AAACGC/CGTTTG	4	1	2	1																																																																																																																																																																																																																														8
AAACGT/ACGTTT	4		2																																																																																																																																																																																																																															6
AAAGAG/CTCTTT	6	3																																																																																																																																																																																																																																9
AAAGAT/ATCTTT	1		1																																																																																																																																																																																																																															2
AAAGCC/CTTTGG		1																																																																																																																																																																																																																																1
AAAGCG/CGCTTT	1		2	1																																																																																																																																																																																																																														4
AAAGGC/CCTTTG	1	1	1																																																																																																																																																																																																																															3
AAAGGG/CCCTTT	4	3	1																																																																																																																																																																																																																															8
AAAGGT/ACCTTT	1																																																																																																																																																																																																																																	1
AAAGTG/ACTTTC	2	1																																																																																																																																																																																																																																3
AAAGTT/AACTTT	1																																																																																																																																																																																																																																	1
AAATAC/ATTTGT	2																																																																																																																																																																																																																																	2
AAATAG/ATTTCT	3																																																																																																																																																																																																																																	3
AAATAT/ATATTT	5		1																																																																																																																																																																																																																															6
AAATGC/ATTTGC	2	2			1																																																																																																																																																																																																																													5
AAATGT/ACATTT	4		1																																																																																																																																																																																																																															5
AAATTC/AATTTG	1																																																																																																																																																																																																																																	1
AAATTG/AATTTC	1																																																																																																																																																																																																																																	1
AACAAG/CTTGTT		1																																																																																																																																																																																																																																1
AACAAT/ATTGTT	3	1																																																																																																																																																																																																																																4
AACACG/CGTGTT	1																																																																																																																																																																																																																																	1
AACAGC/CTGTTG	6	2	1	2																																																																																																																																																																																																																														11
AACAGT/ACTGTT	2																																																																																																																																																																																																																																	2
AACATG/ATGTTC	2	1																																																																																																																																																																																																																																3
AACATT/AATGTT	1																																																																																																																																																																																																																																	1
AACCAC/GGTTGT	2																																																																																																																																																																																																																																	2
AACCCT/AGGGTT	8			1																																																																																																																																																																																																																														9
AACCGC/CGGTTG	4																																																																																																																																																																																																																																	4
AACGAC/CGTTGT	1																																																																																																																																																																																																																																	1
AACGAT/ATCGTT	2	2																																																																																																																																																																																																																																4
AACGCC/CGTTGG	1																																																																																																																																																																																																																																	1
AACGCG/CGCGTT	3																																																																																																																																																																																																																																	3
AACGCT/AGCGTT	2	1																																																																																																																																																																																																																																3
AACGGC/CCGTTG	2		1																																																																																																																																																																																																																															3
AACGGT/ACCGTT	2	1																																																																																																																																																																																																																																3
AACGTC/ACGTTG	1																																																																																																																																																																																																																																	1
AACGTG/ACGTTC	1	1	1																																																																																																																																																																																																																															3
AACGTT/AACGTT	1																																																																																																																																																																																																																																	1
AACTAT/AGTTAT	1																																																																																																																																																																																																																																	1
AACTGC/AGTTGC		2																																																																																																																																																																																																																																2
AACTGT/ACAGTT		1																																																																																																																																																																																																																																1
AACTTC/AAGTTG	1	1																																																																																																																																																																																																																																2
AAGACC/CTTGGT		1																																																																																																																																																																																																																																1
AAGACG/CGTCTT	3																																																																																																																																																																																																																																	3
AAGAGC/CTCTTG	1																																																																																																																																																																																																																																	1
AAGAGG/CCTCTT	18	1	1																																																																																																																																																																																																																															20
AAGATG/ATCTTC	3		1	1																																																																																																																																																																																																																														5
AAGCAC/CTTGTG		1																																																																																																																																																																																																																																1
AAGCAG/CTGCTT	5	1	1																																																																																																																																																																																																																															7
AAGCAT/ATGCTT	1																																																																																																																																																																																																																																	1
AAGCCG/CGGCTT			1																																																																																																																																																																																																																															1
AAGCGG/CCGCTT	12	3																																																																																																																																																																																																																																15
AAGCGT/ACGCTT	1			1																																																																																																																																																																																																																														2
AAGCTC/AGCTTG	1																																																																																																																																																																																																																																	1
AAGCTG/AGCTTC	2	1																																																																																																																																																																																																																																3
AAGGAG/CCTTCT	4	6																																																																																																																																																																																																																																10
AAGGAT/ATCCTT	3																																																																																																																																																																																																																																	3
AAGGCG/CCTTCG	7																																																																																																																																																																																																																																	7
AAGGGG/CCCCTT	3																																																																																																																																																																																																																																	3
AAGGTC/ACCTTG		1																																																																																																																																																																																																																																1
AAGGTG/ACCTTC	3	1																																																																																																																																																																																																																																4
AAGTCG/ACTTCG		1																																																																																																																																																																																																																																1
AAGTGC/ACTTGC		1	2																																																																																																																																																																																																																															3
AATACG/ATTCGT	1																																																																																																																																																																																																																																	1
AATAGC/ATTGCT	2	1	1																																																																																																																																																																																																																															4
AATAGT/ACTATT	4	1																																																																																																																																																																																																																																5
AATATG/ATATTC	2		1																																																																																																																																																																																																																															3
AATATT/AATATT	3	1																																																																																																																																																																																																																																4
AATCAC/ATTGTG	1	1	1																																																																																																																																																																																																																															3
AATCGC/ATTGCG	2	5																																																																																																																																																																																																																																7
AATGAG/ATTCTC	1		1																																																																																																																																																																																																																															2
AATGCG/ATTCGC	2	1																																																																																																																																																																																																																																3
AATGCT/AGCATT	1																																																																																																																																																																																																																																	1
AATGGC/ATTGCC	3		1																																																																																																																																																																																																																															4
AATGGG/ATTCCC		1																																																																																																																																																																																																																																1
AATGGT/ACCATT	1		1																																																																																																																																																																																																																															2
AATGTC/ACATTG	1																																																																																																																																																																																																																																	1
AATTAC/AATTGT	1	1																																																																																																																																																																																																																																2
AATTAT/AATTAT		1																																																																																																																																																																																																																																1
ACACAG/CTGTGT	1																																																																																																																																																																																																																																	1
ACACAT/ATGTGT	4	1	1																																																																																																																																																																																																																															6
ACACGC/CGTGTG	7		1																																																																																																																																																																																																																															8
ACACGT/ACGTGT	2		1																																																																																																																																																																																																																															3
ACACTC/AGTGTG	1																																																																																																																																																																																																																																	1
ACAGAG/CTCTGT	1																																																																																																																																																																																																																																	1
ACAGCT/AGCTGT	1	1																																																																																																																																																																																																																																2
ACAGGC/CCTGTG	3	1																																																																																																																																																																																																																																4
ACATAT/ATATGT	26	4	1																																																																																																																																																																																																																															31
ACATCC/ATGTGG	1																																																																																																																																																																																																																																	1
ACATCG/ATGTCG	1																																																																																																																																																																																																																																	1
ACATGC/ATGTGC	6																																																																																																																																																																																																																																	6
ACATGT/ACATGT	5																																																																																																																																																																																																																																	5
ACCACG/CGTGGT		1																																																																																																																																																																																																																																1
ACCACT/AGTGGT	2						2																																																																																																																																																																																																																											4
ACCATC/ATGGTG	2																																																																																																																																																																																																																																	2
ACCCGT/ACGGGT	1																																																																																																																																																																																																																																	1
ACCCTC/AGGGTG	1																																																																																																																																																																																																																																	1
ACCGAG/CGGTCT	1																																																																																																																																																																																																																																	1
ACCGCC/CGGTGG	4	3																																																																																																																																																																																																																																7
ACCGCG/CGCGGT	2																																																																																																																																																																																																																																	2
ACCGCT/AGCGGT	9	2																																																																																																																																																																																																																																11
ACCGTC/ACGGTG	1																																																																																																																																																																																																																																	1
ACCTCC/AGGTGG	4																																																																																																																																																																																																																																	4
ACCTCT/AGAGGT	1																																																																																																																																																																																																																																	1
ACCTGC/AGGTGC	3	1																																																																																																																																																																																																																																4
ACGAGG/CCTCGT	2																																																																																																																																																																																																																																	2
ACGATG/ATCGTC	4																																																																																																																																																																																																																																	4
ACGCAG/CGTCTG	1																																																																																																																																																																																																																																	1
ACGCAT/ATGCGT	3	1																																																																																																																																																																																																																																4
ACGCGG/CCGCGT	1																																																																																																																																																																																																																																	1
ACGCGT/ACGCGT	1																																																																																																																																																																																																																																	1
ACGCTG/AGCGTC	2																																																																																																																																																																																																																																	2
ACGGCG/CCGTCG	1																																																																																																																																																																																																																																	1
ACGGGC/CCCGTG	2																																																																																																																																																																																																																																	2
ACGTAT/ACGTAT	6	1																																																																																																																																																																																																																																7
ACTATG/AGTCAT	1																																																																																																																																																																																																																																	1
ACTCCC/AGTGGG	1																																																																																																																																																																																																																																	1
ACTCCG/AGTCGG	1	1																																																																																																																																																																																																																																2
ACTCGC/AGTGCG	1																																																																																																																																																																																																																																	1
ACTCGG/AGTCCG	1																																																																																																																																																																																																																																	1
ACTCTC/AGAGTG				1																																																																																																																																																																																																																														1
ACTGCC/AGTGGC	4																																																																																																																																																																																																																																	4
ACTGCG/AGTCGC	1																																																																																																																																																																																																																																	1
ACTGCT/AGCAGT	1	2																																																																																																																																																																																																																																3
AGAGGC/CCTCTG	1	2																																																																																																																																																																																																																																3
AGAGGG/CCCTCT	4	3																																																																																																																																																																																																																																7
AGATGC/ATCTGC	2	2																																																																																																																																																																																																																																4
AGATGG/ATCTCC				1																																																																																																																																																																																																																														1
AGCAGG/CCTGCT	2																																																																																																																																																																																																																																	2
AGCATC/ATGCTG	3																																																																																																																																																																																																																																	3
AGCCGC/CGGCTG	3																																																																																																																																																																																																																																	3
AGCGAT/ATCGCT	2		1																																																																																																																																																																																																																															3
AGCGGC/CCGCTG	10	3																																																																																																																																																																																																																																13
AGCGGG/CCCGCT	2																																																																																																																																																																																																																																	2
AGGATG/ATCCTC	1		1																																																																																																																																																																																																																															2
AGGCGC/CCTGCG	1																																																																																																																																																																																																																																	1
AGGCGG/CCGCCT	3																																																																																																																																																																																																																																	3
AGGGGC/CCCCTG	2	1																																																																																																																																																																																																																																3
AGGGGG/CCCCCT	1																																																																																																																																																																																																																																	1
ATATGC/ATATGC	3																																																																																																																																																																																																																																	3
ATCCCC/ATGGGG	1																																																																																																																																																																																																																																	1
ATCCGC/ATGCGG	1																																																																																																																																																																																																																																	1
ATCGCC/ATGGCG	5	1																																																																																																																																																																																																																																6
ATCGCG/ATCGCG	1																																																																																																																																																																																																																																	1
ATCGGC/ATGCCG	2																																																																																																																																																																																																																																	2
ATGCGC/ATGCGC	2																																																																																																																																																																																																																																	2
CCCGCG/CGCGGG	1																																																																																																																																																																																																																																	1
